Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0008_M02
         (547 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    25   2.2  
AJ439353-5|CAD27927.1|  459|Anopheles gambiae putative G-protein...    24   3.8  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    23   5.0  
X95912-1|CAA65156.1|  696|Anopheles gambiae immune factor protein.     23   6.6  

>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-signaling
            promoter protein.
          Length = 1197

 Score = 24.6 bits (51), Expect = 2.2
 Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 2/32 (6%)
 Frame = +2

Query: 128  SGILPAADEACD--AAGSRSTHHNKHSSHKES 217
            SG L  A   C   +  S S+ H+ HSSH  S
Sbjct: 1075 SGTLVGALNRCSNGSCSSTSSSHSNHSSHSSS 1106


>AJ439353-5|CAD27927.1|  459|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 459

 Score = 23.8 bits (49), Expect = 3.8
 Identities = 12/38 (31%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
 Frame = -3

Query: 257 RIEYGRRFSLFDHKTPYGKSACYG-ALSDCRLRRKLHQ 147
           RI  G+ +SL  +  P G   C G  + +  +R+ L+Q
Sbjct: 242 RIPIGKTYSLCTNSFPLGTLLCVGIVICNLSVRKVLYQ 279


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 23.4 bits (48), Expect = 5.0
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +1

Query: 220 WSKRLNLRPYSIRC 261
           W  R NL PY+ RC
Sbjct: 935 WQDRNNLPPYAARC 948


>X95912-1|CAA65156.1|  696|Anopheles gambiae immune factor protein.
          Length = 696

 Score = 23.0 bits (47), Expect = 6.6
 Identities = 12/34 (35%), Positives = 16/34 (47%)
 Frame = -2

Query: 492 DRTYSPVREVRQSPLDPRSYAR**ESRQGSQTVY 391
           D TYS  R+ +  PLD     R  +   GS  V+
Sbjct: 315 DNTYSEARDFQFIPLDTVDLRRKRQKLTGSSNVF 348


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 594,890
Number of Sequences: 2352
Number of extensions: 12459
Number of successful extensions: 18
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50460840
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)