Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_M02
(547 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY358788-1|AAQ89148.1| 159|Homo sapiens AVLL5809 protein. 46 1e-04
CR456932-1|CAG33213.1| 159|Homo sapiens SDHD protein. 42 0.002
BT007238-1|AAP35902.1| 159|Homo sapiens succinate dehydrogenase... 42 0.002
BC071756-1|AAH71756.1| 159|Homo sapiens succinate dehydrogenase... 42 0.002
BC071755-1|AAH71755.1| 159|Homo sapiens succinate dehydrogenase... 42 0.002
BC022350-1|AAH22350.1| 159|Homo sapiens succinate dehydrogenase... 42 0.002
BC015992-1|AAH15992.1| 159|Homo sapiens succinate dehydrogenase... 42 0.002
BC015188-1|AAH15188.1| 159|Homo sapiens succinate dehydrogenase... 42 0.002
BC012603-1|AAH12603.1| 159|Homo sapiens succinate dehydrogenase... 42 0.002
BC009574-1|AAH09574.1| 159|Homo sapiens succinate dehydrogenase... 42 0.002
BC005263-1|AAH05263.1| 159|Homo sapiens succinate dehydrogenase... 42 0.002
AB026906-1|BAA81889.1| 159|Homo sapiens small subunit of cytoch... 42 0.002
AB006202-1|BAA22054.1| 159|Homo sapiens cytochrome b small subu... 42 0.002
BC070307-1|AAH70307.1| 159|Homo sapiens succinate dehydrogenase... 41 0.002
>AY358788-1|AAQ89148.1| 159|Homo sapiens AVLL5809 protein.
Length = 159
Score = 45.6 bits (103), Expect = 1e-04
Identities = 30/84 (35%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Frame = +3
Query: 291 SGEKAHDHSKLWVIEKAVSLALVPLIPVALMMPNKLFDSLVAILITAHSFWGLEAIAVPH 470
SG KA S W E+ VS+ L+ LIP + P + D +A +T HS WGL + +
Sbjct: 57 SGSKAA--SLHWTSERVVSVLLLGLIPAGYLNPCSVVDYSLAAALTLHSHWGLGQVVTDY 114
Query: 471 VRASMFGPVIPKIA-IGLVYLVSI 539
V G +PK A GL+ L ++
Sbjct: 115 VH----GDTLPKAARAGLLALSAL 134
>CR456932-1|CAG33213.1| 159|Homo sapiens SDHD protein.
Length = 159
Score = 41.5 bits (93), Expect = 0.002
Identities = 22/61 (36%), Positives = 31/61 (50%)
Frame = +3
Query: 291 SGEKAHDHSKLWVIEKAVSLALVPLIPVALMMPNKLFDSLVAILITAHSFWGLEAIAVPH 470
SG KA S W E+ VS+ L+ L+P A + P D +A +T H WGL + +
Sbjct: 57 SGSKAA--SLHWTSERVVSVLLLGLLPAAYLNPCSAMDYSLAAALTLHGHWGLGQVVTDY 114
Query: 471 V 473
V
Sbjct: 115 V 115
>BT007238-1|AAP35902.1| 159|Homo sapiens succinate dehydrogenase
complex, subunit D, integral membrane protein protein.
Length = 159
Score = 41.5 bits (93), Expect = 0.002
Identities = 22/61 (36%), Positives = 31/61 (50%)
Frame = +3
Query: 291 SGEKAHDHSKLWVIEKAVSLALVPLIPVALMMPNKLFDSLVAILITAHSFWGLEAIAVPH 470
SG KA S W E+ VS+ L+ L+P A + P D +A +T H WGL + +
Sbjct: 57 SGSKAA--SLHWTSERVVSVLLLGLLPAAYLNPCSAMDYSLAAALTLHGHWGLGQVVTDY 114
Query: 471 V 473
V
Sbjct: 115 V 115
>BC071756-1|AAH71756.1| 159|Homo sapiens succinate dehydrogenase
complex, subunit D, integral membrane protein protein.
Length = 159
Score = 41.5 bits (93), Expect = 0.002
Identities = 22/61 (36%), Positives = 31/61 (50%)
Frame = +3
Query: 291 SGEKAHDHSKLWVIEKAVSLALVPLIPVALMMPNKLFDSLVAILITAHSFWGLEAIAVPH 470
SG KA S W E+ VS+ L+ L+P A + P D +A +T H WGL + +
Sbjct: 57 SGSKAA--SLHWTSERVVSVLLLGLLPAAYLNPCSAMDYSLAAALTLHGHWGLGQVVTDY 114
Query: 471 V 473
V
Sbjct: 115 V 115
>BC071755-1|AAH71755.1| 159|Homo sapiens succinate dehydrogenase
complex, subunit D, integral membrane protein protein.
Length = 159
Score = 41.5 bits (93), Expect = 0.002
Identities = 22/61 (36%), Positives = 31/61 (50%)
Frame = +3
Query: 291 SGEKAHDHSKLWVIEKAVSLALVPLIPVALMMPNKLFDSLVAILITAHSFWGLEAIAVPH 470
SG KA S W E+ VS+ L+ L+P A + P D +A +T H WGL + +
Sbjct: 57 SGSKAA--SLHWTSERVVSVLLLGLLPAAYLNPCSAMDYSLAAALTLHGHWGLGQVVTDY 114
Query: 471 V 473
V
Sbjct: 115 V 115
>BC022350-1|AAH22350.1| 159|Homo sapiens succinate dehydrogenase
complex, subunit D, integral membrane protein protein.
Length = 159
Score = 41.5 bits (93), Expect = 0.002
Identities = 22/61 (36%), Positives = 31/61 (50%)
Frame = +3
Query: 291 SGEKAHDHSKLWVIEKAVSLALVPLIPVALMMPNKLFDSLVAILITAHSFWGLEAIAVPH 470
SG KA S W E+ VS+ L+ L+P A + P D +A +T H WGL + +
Sbjct: 57 SGSKAA--SLHWTSERVVSVLLLGLLPAAYLNPCSAMDYSLAAALTLHGHWGLGQVVTDY 114
Query: 471 V 473
V
Sbjct: 115 V 115
>BC015992-1|AAH15992.1| 159|Homo sapiens succinate dehydrogenase
complex, subunit D, integral membrane protein protein.
Length = 159
Score = 41.5 bits (93), Expect = 0.002
Identities = 22/61 (36%), Positives = 31/61 (50%)
Frame = +3
Query: 291 SGEKAHDHSKLWVIEKAVSLALVPLIPVALMMPNKLFDSLVAILITAHSFWGLEAIAVPH 470
SG KA S W E+ VS+ L+ L+P A + P D +A +T H WGL + +
Sbjct: 57 SGSKAA--SLHWTSERVVSVLLLGLLPAAYLNPCSAMDYSLAAALTLHGHWGLGQVVTDY 114
Query: 471 V 473
V
Sbjct: 115 V 115
>BC015188-1|AAH15188.1| 159|Homo sapiens succinate dehydrogenase
complex, subunit D, integral membrane protein protein.
Length = 159
Score = 41.5 bits (93), Expect = 0.002
Identities = 22/61 (36%), Positives = 31/61 (50%)
Frame = +3
Query: 291 SGEKAHDHSKLWVIEKAVSLALVPLIPVALMMPNKLFDSLVAILITAHSFWGLEAIAVPH 470
SG KA S W E+ VS+ L+ L+P A + P D +A +T H WGL + +
Sbjct: 57 SGSKAA--SLHWTSERVVSVLLLGLLPAAYLNPCSAMDYSLAAALTLHGHWGLGQVVTDY 114
Query: 471 V 473
V
Sbjct: 115 V 115
>BC012603-1|AAH12603.1| 159|Homo sapiens succinate dehydrogenase
complex, subunit D, integral membrane protein protein.
Length = 159
Score = 41.5 bits (93), Expect = 0.002
Identities = 22/61 (36%), Positives = 31/61 (50%)
Frame = +3
Query: 291 SGEKAHDHSKLWVIEKAVSLALVPLIPVALMMPNKLFDSLVAILITAHSFWGLEAIAVPH 470
SG KA S W E+ VS+ L+ L+P A + P D +A +T H WGL + +
Sbjct: 57 SGSKAA--SLHWTSERVVSVLLLGLLPAAYLNPCSAMDYSLAAALTLHGHWGLGQVVTDY 114
Query: 471 V 473
V
Sbjct: 115 V 115
>BC009574-1|AAH09574.1| 159|Homo sapiens succinate dehydrogenase
complex, subunit D, integral membrane protein protein.
Length = 159
Score = 41.5 bits (93), Expect = 0.002
Identities = 22/61 (36%), Positives = 31/61 (50%)
Frame = +3
Query: 291 SGEKAHDHSKLWVIEKAVSLALVPLIPVALMMPNKLFDSLVAILITAHSFWGLEAIAVPH 470
SG KA S W E+ VS+ L+ L+P A + P D +A +T H WGL + +
Sbjct: 57 SGSKAA--SLHWTSERVVSVLLLGLLPAAYLNPCSAMDYSLAAALTLHGHWGLGQVVTDY 114
Query: 471 V 473
V
Sbjct: 115 V 115
>BC005263-1|AAH05263.1| 159|Homo sapiens succinate dehydrogenase
complex, subunit D, integral membrane protein protein.
Length = 159
Score = 41.5 bits (93), Expect = 0.002
Identities = 22/61 (36%), Positives = 31/61 (50%)
Frame = +3
Query: 291 SGEKAHDHSKLWVIEKAVSLALVPLIPVALMMPNKLFDSLVAILITAHSFWGLEAIAVPH 470
SG KA S W E+ VS+ L+ L+P A + P D +A +T H WGL + +
Sbjct: 57 SGSKAA--SLHWTSERVVSVLLLGLLPAAYLNPCSAMDYSLAAALTLHGHWGLGQVVTDY 114
Query: 471 V 473
V
Sbjct: 115 V 115
>AB026906-1|BAA81889.1| 159|Homo sapiens small subunit of
cytochrome b of succinate dehydrogenase protein.
Length = 159
Score = 41.5 bits (93), Expect = 0.002
Identities = 22/61 (36%), Positives = 31/61 (50%)
Frame = +3
Query: 291 SGEKAHDHSKLWVIEKAVSLALVPLIPVALMMPNKLFDSLVAILITAHSFWGLEAIAVPH 470
SG KA S W E+ VS+ L+ L+P A + P D +A +T H WGL + +
Sbjct: 57 SGSKAA--SLHWTSERVVSVLLLGLLPAAYLNPCSAMDYSLAAALTLHGHWGLGQVVTDY 114
Query: 471 V 473
V
Sbjct: 115 V 115
>AB006202-1|BAA22054.1| 159|Homo sapiens cytochrome b small subunit
of complex II protein.
Length = 159
Score = 41.5 bits (93), Expect = 0.002
Identities = 22/61 (36%), Positives = 31/61 (50%)
Frame = +3
Query: 291 SGEKAHDHSKLWVIEKAVSLALVPLIPVALMMPNKLFDSLVAILITAHSFWGLEAIAVPH 470
SG KA S W E+ VS+ L+ L+P A + P D +A +T H WGL + +
Sbjct: 57 SGSKAA--SLHWTSERVVSVLLLGLLPAAYLNPCSAMDYSLAAALTLHGHWGLGQVVTDY 114
Query: 471 V 473
V
Sbjct: 115 V 115
>BC070307-1|AAH70307.1| 159|Homo sapiens succinate dehydrogenase
complex, subunit D, integral membrane protein protein.
Length = 159
Score = 41.1 bits (92), Expect = 0.002
Identities = 22/61 (36%), Positives = 30/61 (49%)
Frame = +3
Query: 291 SGEKAHDHSKLWVIEKAVSLALVPLIPVALMMPNKLFDSLVAILITAHSFWGLEAIAVPH 470
SG KA S W E+ VS L+ L+P A + P D +A +T H WGL + +
Sbjct: 57 SGSKAA--SLHWTSERVVSFLLLGLLPAAYLNPCSAMDYSLAAALTLHGHWGLGQVVTDY 114
Query: 471 V 473
V
Sbjct: 115 V 115
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,137,569
Number of Sequences: 237096
Number of extensions: 1728395
Number of successful extensions: 3436
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 3322
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3436
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5364536570
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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