Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_M02
(547 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY071617-1|AAL49239.1| 182|Drosophila melanogaster RE66546p pro... 81 1e-15
AY071388-1|AAL49010.1| 182|Drosophila melanogaster RE42847p pro... 81 1e-15
AE014297-3381|AAF56180.1| 182|Drosophila melanogaster CG10219-P... 81 1e-15
M21329-1|AAA28608.1| 916|Drosophila melanogaster protein ( D.me... 36 0.036
U09789-1|AAA18501.1| 737|Drosophila melanogaster cytoplasmic ba... 35 0.082
BT003476-1|AAO39479.1| 711|Drosophila melanogaster RE59350p pro... 35 0.082
AE014298-904|AAF46170.1| 738|Drosophila melanogaster CG3929-PA ... 35 0.082
U73489-1|AAB18232.1| 767|Drosophila melanogaster Nem protein. 33 0.25
AY119118-1|AAM50978.1| 911|Drosophila melanogaster RE16777p pro... 28 7.2
AY075472-1|AAL68284.1| 692|Drosophila melanogaster RE32029p pro... 28 7.2
AL132797-4|CAB60096.1| 1359|Drosophila melanogaster EG:BACN25G24... 28 7.2
AE014298-581|AAN09114.1| 901|Drosophila melanogaster CG32783-PA... 28 7.2
AE014298-580|AAN09113.1| 901|Drosophila melanogaster CG32786-PA... 28 7.2
AE014298-579|AAF45908.2| 911|Drosophila melanogaster CG2941-PA ... 28 7.2
AE014298-337|AAF45726.3| 1537|Drosophila melanogaster CG3895-PA ... 28 7.2
AE014134-1125|AAG22419.2| 692|Drosophila melanogaster CG31634-P... 28 7.2
>AY071617-1|AAL49239.1| 182|Drosophila melanogaster RE66546p
protein.
Length = 182
Score = 80.6 bits (190), Expect = 1e-15
Identities = 39/126 (30%), Positives = 75/126 (59%)
Frame = +3
Query: 168 PAVAQRTITSTLPIRSLVVKEAKSTPILNSVRAFRTSMVRLSGEKAHDHSKLWVIEKAVS 347
P + T+ + + +++V A + + VR S R++ + H+ LW +E+ VS
Sbjct: 26 PLKSYSTLVANVQRKAVVQPLAVAKIVAPVVREISVSAPRMASAGS-SHTLLWTVERIVS 84
Query: 348 LALVPLIPVALMMPNKLFDSLVAILITAHSFWGLEAIAVPHVRASMFGPVIPKIAIGLVY 527
L+ +IP A + P+++ D+L+AI + H+ WG+EA+ V ++R S+ G V+PK+A +
Sbjct: 85 AGLLAVIPAAFIAPSQVLDALMAISVVIHTHWGVEAMVVDYMRPSVVGNVLPKVAHIALI 144
Query: 528 LVSIAT 545
++S+AT
Sbjct: 145 IISVAT 150
>AY071388-1|AAL49010.1| 182|Drosophila melanogaster RE42847p
protein.
Length = 182
Score = 80.6 bits (190), Expect = 1e-15
Identities = 39/126 (30%), Positives = 75/126 (59%)
Frame = +3
Query: 168 PAVAQRTITSTLPIRSLVVKEAKSTPILNSVRAFRTSMVRLSGEKAHDHSKLWVIEKAVS 347
P + T+ + + +++V A + + VR S R++ + H+ LW +E+ VS
Sbjct: 26 PLKSYSTLVANVQRKAVVQPLAVAKIVAPVVREISVSAPRMASAGS-SHTLLWTVERIVS 84
Query: 348 LALVPLIPVALMMPNKLFDSLVAILITAHSFWGLEAIAVPHVRASMFGPVIPKIAIGLVY 527
L+ +IP A + P+++ D+L+AI + H+ WG+EA+ V ++R S+ G V+PK+A +
Sbjct: 85 AGLLAVIPAAFIAPSQVLDALMAISVVIHTHWGVEAMVVDYMRPSVVGNVLPKVAHIALI 144
Query: 528 LVSIAT 545
++S+AT
Sbjct: 145 IISVAT 150
>AE014297-3381|AAF56180.1| 182|Drosophila melanogaster CG10219-PA
protein.
Length = 182
Score = 80.6 bits (190), Expect = 1e-15
Identities = 39/126 (30%), Positives = 75/126 (59%)
Frame = +3
Query: 168 PAVAQRTITSTLPIRSLVVKEAKSTPILNSVRAFRTSMVRLSGEKAHDHSKLWVIEKAVS 347
P + T+ + + +++V A + + VR S R++ + H+ LW +E+ VS
Sbjct: 26 PLKSYSTLVANVQRKAVVQPLAVAKIVAPVVREISVSAPRMASAGS-SHTLLWTVERIVS 84
Query: 348 LALVPLIPVALMMPNKLFDSLVAILITAHSFWGLEAIAVPHVRASMFGPVIPKIAIGLVY 527
L+ +IP A + P+++ D+L+AI + H+ WG+EA+ V ++R S+ G V+PK+A +
Sbjct: 85 AGLLAVIPAAFIAPSQVLDALMAISVVIHTHWGVEAMVVDYMRPSVVGNVLPKVAHIALI 144
Query: 528 LVSIAT 545
++S+AT
Sbjct: 145 IISVAT 150
>M21329-1|AAA28608.1| 916|Drosophila melanogaster protein (
D.melanogaster 3-hydroxy-3-methyglutaryl coenzyme A
reductase (HMG CoA) gene, completecds. ).
Length = 916
Score = 35.9 bits (79), Expect = 0.036
Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 2/89 (2%)
Frame = +3
Query: 18 VGYNTIINSNFP*IQCLGRKRS*LAFSMFFRT--PACTSRVFSQQLMKLATQPAVAQRTI 191
VG T+ + C+ S L + F T PAC S +F L + +V +
Sbjct: 221 VGVGTLSGVQRLEVLCMFAVLSVLVNYVVFMTFYPACLSLIFD--LSRSGVDMSVVREKA 278
Query: 192 TSTLPIRSLVVKEAKSTPILNSVRAFRTS 278
+LP++SL +E K+ P+L V+ T+
Sbjct: 279 KGSLPLKSLTEEEQKANPVLQRVKLIMTT 307
>U09789-1|AAA18501.1| 737|Drosophila melanogaster cytoplasmic basic
protein protein.
Length = 737
Score = 34.7 bits (76), Expect = 0.082
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +2
Query: 95 LNVFSDTSMHESGILPAADEACDAAGSRSTHHNKHSSH 208
LN+FS ++ H+S + AA A ++ S S HH H SH
Sbjct: 327 LNIFSSSTKHQSNMSTAA-SASSSSSSASLHHANHLSH 363
>BT003476-1|AAO39479.1| 711|Drosophila melanogaster RE59350p
protein.
Length = 711
Score = 34.7 bits (76), Expect = 0.082
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +2
Query: 95 LNVFSDTSMHESGILPAADEACDAAGSRSTHHNKHSSH 208
LN+FS ++ H+S + AA A ++ S S HH H SH
Sbjct: 301 LNIFSSSTKHQSNMSTAA-SASSSSSSASLHHANHLSH 337
>AE014298-904|AAF46170.1| 738|Drosophila melanogaster CG3929-PA
protein.
Length = 738
Score = 34.7 bits (76), Expect = 0.082
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +2
Query: 95 LNVFSDTSMHESGILPAADEACDAAGSRSTHHNKHSSH 208
LN+FS ++ H+S + AA A ++ S S HH H SH
Sbjct: 328 LNIFSSSTKHQSNMSTAA-SASSSSSSASLHHANHLSH 364
>U73489-1|AAB18232.1| 767|Drosophila melanogaster Nem protein.
Length = 767
Score = 33.1 bits (72), Expect = 0.25
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +2
Query: 113 TSMHESGILPAADEACDAAGSRSTHHNKHSSHKESCGQR 229
TS++++GILP C + HH HS+H + GQR
Sbjct: 706 TSVYQTGILPNLRLTCGKR-CPAPHHQDHSAHPDPAGQR 743
>AY119118-1|AAM50978.1| 911|Drosophila melanogaster RE16777p
protein.
Length = 911
Score = 28.3 bits (60), Expect = 7.2
Identities = 17/35 (48%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = -2
Query: 186 CVERLPAASQASSAAGRIPDSCMLVSE-KTLRRPV 85
CVE LP S A AAGR +C L +E K L R +
Sbjct: 161 CVETLPLLSAALRAAGRAIVNCNLPAENKQLLRQI 195
>AY075472-1|AAL68284.1| 692|Drosophila melanogaster RE32029p
protein.
Length = 692
Score = 28.3 bits (60), Expect = 7.2
Identities = 20/79 (25%), Positives = 33/79 (41%), Gaps = 1/79 (1%)
Frame = +2
Query: 140 PAADEACDAAGSRSTHHNKHSSHKESCGQRG*IYAHTQFGACIPHVHGPTI-R*KSSRPL 316
P++D A S +++ CG G +Y + C+ H ++ R + +
Sbjct: 469 PSSDSPALVASCNSNCGCSRTNYDPICGVDGVMYYSPCYAGCVQEEHANSLKRYHNCSCI 528
Query: 317 ETVGD*ESGILSSGASHSR 373
E VG + G SS A H R
Sbjct: 529 EQVGFVDDGNPSSEAPHFR 547
>AL132797-4|CAB60096.1| 1359|Drosophila melanogaster
EG:BACN25G24.3,FBgn0004860;ph-d protein.
Length = 1359
Score = 28.3 bits (60), Expect = 7.2
Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +3
Query: 192 TSTLPIRSLV-VKEAKSTPILNSVRAFRTSMVRLSGEKAHDHSKL 323
+STLP S+V + STP++ S + G + H H +L
Sbjct: 766 SSTLPTSSVVTITSQSSTPLVTSSTVASMQQAQTQGTQIHQHQQL 810
>AE014298-581|AAN09114.1| 901|Drosophila melanogaster CG32783-PA
protein.
Length = 901
Score = 28.3 bits (60), Expect = 7.2
Identities = 17/35 (48%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = -2
Query: 186 CVERLPAASQASSAAGRIPDSCMLVSE-KTLRRPV 85
CVE LP S A AAGR +C L +E K L R +
Sbjct: 161 CVETLPLLSAALRAAGRAIVNCNLPAENKQLLRQI 195
>AE014298-580|AAN09113.1| 901|Drosophila melanogaster CG32786-PA
protein.
Length = 901
Score = 28.3 bits (60), Expect = 7.2
Identities = 17/35 (48%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = -2
Query: 186 CVERLPAASQASSAAGRIPDSCMLVSE-KTLRRPV 85
CVE LP S A AAGR +C L +E K L R +
Sbjct: 161 CVETLPLLSAALRAAGRAIVNCNLPAENKQLLRQI 195
>AE014298-579|AAF45908.2| 911|Drosophila melanogaster CG2941-PA
protein.
Length = 911
Score = 28.3 bits (60), Expect = 7.2
Identities = 17/35 (48%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = -2
Query: 186 CVERLPAASQASSAAGRIPDSCMLVSE-KTLRRPV 85
CVE LP S A AAGR +C L +E K L R +
Sbjct: 161 CVETLPLLSAALRAAGRAIVNCNLPAENKQLLRQI 195
>AE014298-337|AAF45726.3| 1537|Drosophila melanogaster CG3895-PA
protein.
Length = 1537
Score = 28.3 bits (60), Expect = 7.2
Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +3
Query: 192 TSTLPIRSLV-VKEAKSTPILNSVRAFRTSMVRLSGEKAHDHSKL 323
+STLP S+V + STP++ S + G + H H +L
Sbjct: 944 SSTLPTSSVVTITSQSSTPLVTSSTVASMQQAQTQGTQIHQHQQL 988
>AE014134-1125|AAG22419.2| 692|Drosophila melanogaster CG31634-PA
protein.
Length = 692
Score = 28.3 bits (60), Expect = 7.2
Identities = 20/79 (25%), Positives = 33/79 (41%), Gaps = 1/79 (1%)
Frame = +2
Query: 140 PAADEACDAAGSRSTHHNKHSSHKESCGQRG*IYAHTQFGACIPHVHGPTI-R*KSSRPL 316
P++D A S +++ CG G +Y + C+ H ++ R + +
Sbjct: 469 PSSDSPALVASCNSNCGCSRTNYDPICGVDGVMYYSPCYAGCVQEEHANSLKRYHNCSCI 528
Query: 317 ETVGD*ESGILSSGASHSR 373
E VG + G SS A H R
Sbjct: 529 EQVGFVDDGNPSSEAPHFR 547
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,466,214
Number of Sequences: 53049
Number of extensions: 548600
Number of successful extensions: 1418
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1351
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1418
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2069139900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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