Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_L23
(715 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC645.13 |||transcription elongation regulator|Schizosaccharom... 32 0.094
SPCC330.01c |rhp16|SPCC613.13c, rad16|Rad16 homolog Rhp16|Schizo... 30 0.29
SPAC12G12.13c |cid14||poly|Schizosaccharomyces pombe|chr 1|||Manual 30 0.29
SPAC17A5.16 |||human down-regulated in multiple cancers-1 homolo... 30 0.38
SPBC3H7.14 |mug176||BRCT domain protein|Schizosaccharomyces pomb... 29 0.50
SPAC17D4.03c |||membrane transporter |Schizosaccharomyces pombe|... 29 0.50
SPBC1289.15 ||SPBC8E4.07c|glycoprotein |Schizosaccharomyces pomb... 28 1.2
SPAC6B12.02c |mus7||DNA repair protein Mus7|Schizosaccharomyces ... 27 2.7
SPAC1142.07c |vps32|snf7|vacuolar sorting protein Vps32|Schizosa... 27 3.5
SPBC215.10 |||haloacid dehalogenase-like hydrolase|Schizosacchar... 27 3.5
SPCC1906.03 |wtf19||wtf element Wtf19|Schizosaccharomyces pombe|... 27 3.5
SPCC1620.02 |wtf23||wtf element Wtf23|Schizosaccharomyces pombe|... 27 3.5
SPBC146.09c |lsd1|swm1, saf110|histone demethylase SWIRM1|Schizo... 27 3.5
SPAC1006.05c |och1||alpha-1,6-mannosyltransferase Och1 |Schizosa... 27 3.5
SPBC725.07 |pex5||peroxisomal targeting signal receptor |Schizos... 27 3.5
SPCC16C4.01 |sif2|SPCC5E4.09|Sad1 interacting factor 2|Schizosac... 26 4.7
SPAC22E12.11c |set3||histone lysine methyltransferase Set3|Schiz... 26 4.7
SPBC649.05 |cut12|stf1|spindle pole body protein Cut12 |Schizosa... 26 6.1
SPAC17H9.01 |cid16||poly|Schizosaccharomyces pombe|chr 1|||Manual 26 6.1
SPBC947.10 |||ubiquitin-protein ligase E3 |Schizosaccharomyces p... 26 6.1
SPAC1834.07 |klp3|krp1|kinesin-like protein Klp3|Schizosaccharom... 26 6.1
>SPCC645.13 |||transcription elongation
regulator|Schizosaccharomyces pombe|chr 3|||Manual
Length = 721
Score = 31.9 bits (69), Expect = 0.094
Identities = 29/126 (23%), Positives = 57/126 (45%), Gaps = 7/126 (5%)
Frame = +1
Query: 283 VIDFDEDYSIKFNKKYDTQWHGNNFN-----KDSYRYTVIKDNEDYKLSNNKNNRTIFN- 444
V+ + D+S+ N KY ++ FN ++R V+K+ + N ++ + N
Sbjct: 263 VLSYTTDHSLTPNNKYREKFRALRFNLVDDKNPAFRARVLKNEISFNDLVNLSSEEMANP 322
Query: 445 DSQSKNEPNLQNATEKTTTQDYSVIPLELISTTENKLISILE-STTESDLSVIPLSTTDT 621
D ++ E Q +TE T + + + P + + E+KL E E+D ++ P +
Sbjct: 323 DLKNLAEEIRQQSTENTVIKQHLIAPRDRL-LDEDKLTQQDELGIAENDDAMFPKPPGEL 381
Query: 622 IPKIEI 639
+ I I
Sbjct: 382 VAPISI 387
>SPCC330.01c |rhp16|SPCC613.13c, rad16|Rad16 homolog
Rhp16|Schizosaccharomyces pombe|chr 3|||Manual
Length = 963
Score = 30.3 bits (65), Expect = 0.29
Identities = 24/92 (26%), Positives = 44/92 (47%)
Frame = +1
Query: 346 GNNFNKDSYRYTVIKDNEDYKLSNNKNNRTIFNDSQSKNEPNLQNATEKTTTQDYSVIPL 525
G + NK + K+N + L +N +++ ++ Q + + L T + +++
Sbjct: 104 GTSCNKINSNSNKGKENMHFVLDDNGDSKGNASNQQVERDDKLDMETTRWNGKEFE---- 159
Query: 526 ELISTTENKLISILESTTESDLSVIPLSTTDT 621
E +ST NK + I + T S S PLS +DT
Sbjct: 160 EPLST--NKKLIIQSNNTSSQHSTPPLSISDT 189
>SPAC12G12.13c |cid14||poly|Schizosaccharomyces pombe|chr 1|||Manual
Length = 684
Score = 30.3 bits (65), Expect = 0.29
Identities = 25/93 (26%), Positives = 38/93 (40%)
Frame = +1
Query: 229 IPVKGSTKNPVEDSIDHNVIDFDEDYSIKFNKKYDTQWHGNNFNKDSYRYTVIKDNEDYK 408
+P++ VED D + D +D K N+ +T H NF K + T E
Sbjct: 586 LPLQDVGLQYVEDESDSDETDAAKDDLFKVNESIETNGH-ENFQKQALTST----GEQSS 640
Query: 409 LSNNKNNRTIFNDSQSKNEPNLQNATEKTTTQD 507
++ N +FN S +E + E TT D
Sbjct: 641 SNSRANPSKLFNISSDDSEDEVP-IIEDTTASD 672
>SPAC17A5.16 |||human down-regulated in multiple cancers-1 homolog
3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 925
Score = 29.9 bits (64), Expect = 0.38
Identities = 29/114 (25%), Positives = 53/114 (46%), Gaps = 2/114 (1%)
Frame = +1
Query: 319 NKKYDTQ-WHGNNFNKDSYRYTVIKDNEDYKLSNNKNNRTIFNDSQSKNEPNLQNATEKT 495
N+K D + WH + + + K+N + LSN +++ N KNE
Sbjct: 109 NEKLDLEEWHQKFWWSLRKKRNLPKENSELDLSNFQDDLDFENSISQKNE---------- 158
Query: 496 TTQDYSVIPLELISTTENKLISILESTTESDLSVIPLSTTDTIPKI-EINDTFT 654
+Q +PL +ST IS L+++++ + + + + TI +I I +TFT
Sbjct: 159 FSQKSPSVPLSPVSTFPASSIS-LDASSDVSAADVSVGGSSTIKEIGSIEETFT 211
>SPBC3H7.14 |mug176||BRCT domain protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 406
Score = 29.5 bits (63), Expect = 0.50
Identities = 23/99 (23%), Positives = 44/99 (44%), Gaps = 2/99 (2%)
Frame = +1
Query: 355 FNKDSYRYTVIKDNEDYKL--SNNKNNRTIFNDSQSKNEPNLQNATEKTTTQDYSVIPLE 528
FN DS+ + D+ ++ L ++ N ++ ND+Q +N P + + T D
Sbjct: 311 FNADSFLDQTLSDDYEFGLITCSDSNESSMSNDAQRENNPETISQISLSPTADL----FS 366
Query: 529 LISTTENKLISILESTTESDLSVIPLSTTDTIPKIEIND 645
T + ++ LES + L+ PL + K+ + D
Sbjct: 367 SFKITTDLEMTHLESAKKKYLAYKPLIGSPLKKKVSLID 405
>SPAC17D4.03c |||membrane transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 732
Score = 29.5 bits (63), Expect = 0.50
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = -2
Query: 279 MINGIFHRILSTSFYRYIYGFSLNVFQXVVLXSNKLSSIFINI 151
+I GIF + T+ Y IY FS FQ + + LS +FI +
Sbjct: 81 LIFGIFAFVSFTTQYLGIYSFSFQPFQLLNVIIASLSMVFITL 123
>SPBC1289.15 ||SPBC8E4.07c|glycoprotein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1283
Score = 28.3 bits (60), Expect = 1.2
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +1
Query: 586 DLSVIPLSTTDTIPKIEINDT 648
DLS++P ST T+ + INDT
Sbjct: 178 DLSILPHSTISTLSTVSINDT 198
>SPAC6B12.02c |mus7||DNA repair protein Mus7|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1888
Score = 27.1 bits (57), Expect = 2.7
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +2
Query: 617 IQYQKLK*MIRSHSRHLLLQKIMKLPHTI 703
+ Y+K K + R+H+ H QK+ KL H I
Sbjct: 568 VSYKKSKKLKRTHTVHDKCQKVAKLDHYI 596
>SPAC1142.07c |vps32|snf7|vacuolar sorting protein
Vps32|Schizosaccharomyces pombe|chr 1|||Manual
Length = 222
Score = 26.6 bits (56), Expect = 3.5
Identities = 19/76 (25%), Positives = 36/76 (47%)
Frame = +1
Query: 337 QWHGNNFNKDSYRYTVIKDNEDYKLSNNKNNRTIFNDSQSKNEPNLQNATEKTTTQDYSV 516
+W G N +KD+ + T+++ E L +K + + E +NA TT + ++
Sbjct: 6 RWFGGNRSKDTTKDTIVRFQEMLAL-YDKKEEVLERQIAEQTEIARKNA---TTNKRLAL 61
Query: 517 IPLELISTTENKLISI 564
L+ EN+L+ I
Sbjct: 62 TALKRKKMHENELVKI 77
>SPBC215.10 |||haloacid dehalogenase-like
hydrolase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 302
Score = 26.6 bits (56), Expect = 3.5
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = +1
Query: 292 FDEDYSIKFNKKYDTQWHGNNFNKDSYRYTVIKDNEDYKLSNNKNNRTIFN 444
+DEDY + ++ D + HG F + +KD+ + L K + IFN
Sbjct: 127 YDEDYVYQIKQESDKKQHGIKFLR--LCGETVKDDANEMLPQLKGPKDIFN 175
>SPCC1906.03 |wtf19||wtf element Wtf19|Schizosaccharomyces pombe|chr
3|||Manual
Length = 393
Score = 26.6 bits (56), Expect = 3.5
Identities = 18/50 (36%), Positives = 23/50 (46%)
Frame = +1
Query: 460 NEPNLQNATEKTTTQDYSVIPLELISTTENKLISILESTTESDLSVIPLS 609
N PNL N E TT DY L I+ EN ++++ S L LS
Sbjct: 59 NNPNLFNTDESTTPPDYGEDSLS-ITHRENHSSGTADNSSTSPLKKAFLS 107
>SPCC1620.02 |wtf23||wtf element Wtf23|Schizosaccharomyces pombe|chr
3|||Manual
Length = 368
Score = 26.6 bits (56), Expect = 3.5
Identities = 18/50 (36%), Positives = 23/50 (46%)
Frame = +1
Query: 460 NEPNLQNATEKTTTQDYSVIPLELISTTENKLISILESTTESDLSVIPLS 609
N PNL N E TT DY L I+ EN ++++ S L LS
Sbjct: 59 NNPNLFNTDESTTPPDYGEDSLS-ITHRENHSSGTADNSSTSPLKKAFLS 107
>SPBC146.09c |lsd1|swm1, saf110|histone demethylase
SWIRM1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1000
Score = 26.6 bits (56), Expect = 3.5
Identities = 12/47 (25%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +1
Query: 334 TQWHGNNF-NKDSYRYTVIKDNEDYKLSNNKNNRTIFNDSQSKNEPN 471
+ W N++ N SY+ + + EDY + + + T+F S++ ++ N
Sbjct: 690 SNWENNSYTNHSSYQISNLFLEEDYAILSEPIDNTVFFASEAISQKN 736
>SPAC1006.05c |och1||alpha-1,6-mannosyltransferase Och1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 396
Score = 26.6 bits (56), Expect = 3.5
Identities = 17/86 (19%), Positives = 43/86 (50%), Gaps = 3/86 (3%)
Frame = +1
Query: 358 NKDSYRYTVIKDNEDYKLSNNKNNRTIFNDSQSKN--EPNLQNATEKTTTQDYSVIPLEL 531
+KD + V+K +++++ + + +D QSK + +++ +Q Y+++PL +
Sbjct: 150 SKDPFDREVMKYTRFWRINHPSYSHAVLDDEQSKALVISSFGDSSVSKISQAYAMMPLPV 209
Query: 532 ISTTENK-LISILESTTESDLSVIPL 606
+ + L+ + + SD+ PL
Sbjct: 210 LKADFFRYLVLLAKGGIYSDIDTAPL 235
>SPBC725.07 |pex5||peroxisomal targeting signal receptor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 598
Score = 26.6 bits (56), Expect = 3.5
Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 7/71 (9%)
Frame = +1
Query: 322 KKYDTQWH----GNNFNKDSYRYTVIKDNEDYKLSNNKN-NRTIFNDSQSKN--EPNLQN 480
++Y QW NN + D Y +V D L++NKN + IF S + N E +LQ
Sbjct: 215 EEYQKQWEDFLKSNNISDDPYTSSVNSFAND-NLAHNKNIDPQIFQHSDTDNVVENSLQT 273
Query: 481 ATEKTTTQDYS 513
+ QD S
Sbjct: 274 EDVYSQNQDES 284
>SPCC16C4.01 |sif2|SPCC5E4.09|Sad1 interacting factor
2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 446
Score = 26.2 bits (55), Expect = 4.7
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -2
Query: 222 GFSLNVFQXVVLXSNKLSSIFINIL 148
GF LN F+ V+ SNK +F N L
Sbjct: 381 GFKLNDFRLVINNSNKFILLFANTL 405
>SPAC22E12.11c |set3||histone lysine methyltransferase
Set3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 859
Score = 26.2 bits (55), Expect = 4.7
Identities = 22/95 (23%), Positives = 43/95 (45%), Gaps = 10/95 (10%)
Frame = +1
Query: 400 DYKLSNNKNNRTIFNDSQSKNEPN---LQNATEKTTTQDYSVIP------LELISTTENK 552
D+K +N + N S+S+N+PN +Q + K + S +P L L + +
Sbjct: 764 DHKANNGDDISNALNTSRSENKPNSNLVQGSVVKPSNTSASALPTSAPKKLSLSEYRQRR 823
Query: 553 LISILESTTESDLSVIPLSTTDTIPKIEI-NDTFT 654
+IL ++ + + + T+P + N +FT
Sbjct: 824 QQNILHQQSKDNQAHGDTARPHTVPAATVSNPSFT 858
>SPBC649.05 |cut12|stf1|spindle pole body protein Cut12
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 548
Score = 25.8 bits (54), Expect = 6.1
Identities = 19/83 (22%), Positives = 37/83 (44%), Gaps = 7/83 (8%)
Frame = +1
Query: 202 EDIQAKSVDIPVKGSTKNPV-EDSIDHNVIDFDEDYSIKFNKKYDTQWHGNNF------N 360
E+ ++ + K + NP E+ H+ +FD Y+I N+ Y + N +
Sbjct: 120 EEFKSPLLQSTPKPNINNPDNENKSKHD--EFDNRYNININESYKNETKSNQRLGEDVPS 177
Query: 361 KDSYRYTVIKDNEDYKLSNNKNN 429
K Y +++ + +K +N NN
Sbjct: 178 KKKYPHSMDAEISKFKWDSNNNN 200
>SPAC17H9.01 |cid16||poly|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1202
Score = 25.8 bits (54), Expect = 6.1
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 8/85 (9%)
Frame = +1
Query: 415 NNKNNRTIFNDSQSKN-EPNLQNAT------EKTTTQDYSVIPLELISTTENKLISILE- 570
N+ NR+ F+DS+S N + L N T+D + +L+ LI +L+
Sbjct: 157 NHLENRSFFHDSESDNFKVVLSNCAINSKEDNNLVTEDRVNLGAKLLLVPVQNLIKLLKV 216
Query: 571 STTESDLSVIPLSTTDTIPKIEIND 645
S DL+VI S D +E+ +
Sbjct: 217 SKISVDLAVIDHSFQDQKLTLEVGN 241
>SPBC947.10 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 676
Score = 25.8 bits (54), Expect = 6.1
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +1
Query: 412 SNNKNNRTIFNDSQSKNEPNLQNATEKTTT 501
SNN N++ ++ S N P+ N +TTT
Sbjct: 411 SNNNTNQSNASNENSPNAPSAANDNTETTT 440
>SPAC1834.07 |klp3|krp1|kinesin-like protein
Klp3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 554
Score = 25.8 bits (54), Expect = 6.1
Identities = 19/80 (23%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Frame = +1
Query: 193 YXLEDIQAKSVDIPVKGSTKNPVEDSIDHNVIDFDEDY-SIKFNKKYDTQWHGNNFNKDS 369
Y ++ K D V STK + D + + D E Y + N + ++ NN D
Sbjct: 432 YAEAQLELKQRD-GVLSSTKQQLSDLMTA-LGDAQERYVELVKNHRVNSNLTANNSLNDK 489
Query: 370 YRYTVIKDNEDYKLSNNKNN 429
+T+ + ++++ ++N +NN
Sbjct: 490 PGFTIEQKDKNFSINNERNN 509
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,346,934
Number of Sequences: 5004
Number of extensions: 42623
Number of successful extensions: 196
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 184
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 196
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 333194204
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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