Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0008_L19
         (276 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.               22   1.6  
AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    21   3.7  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                20   4.9  
U15956-1|AAA67444.1|  129|Apis mellifera hymenoptaecin precursor...    20   6.5  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              20   6.5  
DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholi...    19   8.6  
DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholi...    19   8.6  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    19   8.6  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    19   8.6  
AB264332-1|BAF44087.1|   58|Apis mellifera ecdysone-induced prot...    19   8.6  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    19   8.6  

>DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.
          Length = 160

 Score = 21.8 bits (44), Expect = 1.6
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = -1

Query: 132 LHKYLHSTSQTKDQVEGKILSECYNQKES 46
           L K +   ++    ++ K+LSEC N  +S
Sbjct: 96  LDKLVEMANRKNISIDVKMLSECINANKS 124


>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 20.6 bits (41), Expect = 3.7
 Identities = 9/38 (23%), Positives = 21/38 (55%)
 Frame = -2

Query: 158 RVIVLPVRVFTNICIPPLRRRTKWRVRFFLNVIIRKSP 45
           R+I++ ++    + I PL+   +    FF++++I   P
Sbjct: 144 RIIIIDLKTDKILRIYPLKSSDQTSDSFFVDLVIDVDP 181


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 20.2 bits (40), Expect = 4.9
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = +3

Query: 138 HWQDYHP*GGAIRHHR 185
           H   YHP  G+  HH+
Sbjct: 322 HPSQYHPHRGSSPHHQ 337


>U15956-1|AAA67444.1|  129|Apis mellifera hymenoptaecin precursor
           protein.
          Length = 129

 Score = 19.8 bits (39), Expect = 6.5
 Identities = 6/19 (31%), Positives = 13/19 (68%)
 Frame = +1

Query: 160 EVEPSDTIENVKAKIQDKE 216
           E+EP DT++ +  + + +E
Sbjct: 20  ELEPEDTMDYIPTRFRRQE 38


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 19.8 bits (39), Expect = 6.5
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +1

Query: 172 SDTIENVKAKIQDKECIPPDQQ 237
           +DT+   K KI  K  I PD +
Sbjct: 732 TDTVLAYKPKILGKPTISPDSR 753


>DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholine
           receptor beta1subunit protein.
          Length = 520

 Score = 19.4 bits (38), Expect = 8.6
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = -3

Query: 229 QEGCILCLGSW 197
           Q+ CI+  GSW
Sbjct: 162 QQTCIMKFGSW 172


>DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 19.4 bits (38), Expect = 8.6
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = -3

Query: 220 CILCLGSW 197
           C+L LGSW
Sbjct: 167 CVLKLGSW 174


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 19.4 bits (38), Expect = 8.6
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +2

Query: 197 PRSKTKNASLLTSK 238
           PRS T+NA+ L  K
Sbjct: 587 PRSITRNATALIKK 600


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
            protein.
          Length = 1308

 Score = 19.4 bits (38), Expect = 8.6
 Identities = 8/27 (29%), Positives = 17/27 (62%)
 Frame = -2

Query: 221  MHSLSWILAFTFSMVSDGSTSRVIVLP 141
            +HS   ++A + S V++ +T+   +LP
Sbjct: 942  LHSAQSVVASSASNVTNVTTNLTTILP 968


>AB264332-1|BAF44087.1|   58|Apis mellifera ecdysone-induced
          protein 75 protein.
          Length = 58

 Score = 19.4 bits (38), Expect = 8.6
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -3

Query: 58 SERVRPSSKLLSSKNQPL 5
          +E  +PS  +LS  ++PL
Sbjct: 13 AEEQQPSGDILSPSSEPL 30


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced
          protein 75 protein.
          Length = 900

 Score = 19.4 bits (38), Expect = 8.6
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -3

Query: 58 SERVRPSSKLLSSKNQPL 5
          +E  +PS  +LS  ++PL
Sbjct: 13 AEEQQPSGDILSPSSEPL 30


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,932
Number of Sequences: 438
Number of extensions: 1630
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 48
effective length of database: 125,319
effective search space used:  5388717
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)