Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_L18
(549 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_06_0280 + 22010270-22011407,22011890-22013097 32 0.26
10_01_0324 + 3566638-3566859,3566959-3567223,3567881-3568161 31 0.61
04_04_0248 - 23891684-23892064 31 0.61
11_01_0282 + 2093451-2094668 30 1.4
03_03_0160 + 14957139-14957603,14958054-14958113,14959012-14959776 29 2.4
12_02_0090 + 13493311-13494180 29 3.2
07_01_0626 - 4681826-4682707 29 3.2
05_07_0293 + 29031318-29031812,29032096-29032158,29032365-290324... 29 3.2
05_03_0228 - 10662930-10663417,10663482-10663632 29 3.2
04_03_0362 + 14934236-14934541,14935549-14935647,14935736-149357... 29 3.2
12_01_0744 - 6688631-6688660,6689032-6690603,6690697-6691497 28 4.3
11_06_0655 - 25923171-25923185,25923208-25923432,25923865-259243... 28 4.3
07_03_0327 + 16817149-16817438,16818029-16818224,16818309-168196... 28 4.3
04_04_1499 - 34006999-34007232,34007371-34007440,34007580-340076... 28 4.3
03_05_0647 + 26390924-26391259 28 4.3
02_05_1022 + 33570664-33570976,33572206-33573440,33573873-335740... 28 4.3
02_04_0117 + 19914704-19915830,19916575-19916860,19917047-19918258 28 4.3
11_06_0253 - 21716164-21717144 28 5.6
06_01_0671 - 4899611-4899829,4900870-4901448 28 5.6
04_04_1150 + 31278367-31278885,31280065-31281278,31281759-31283355 28 5.6
04_03_0864 + 20401025-20401810 28 5.6
11_04_0320 + 16354122-16354226,16354652-16356859 27 7.5
09_04_0654 - 19247051-19247305,19247466-19247534,19247618-192477... 27 7.5
06_01_0457 - 3263519-3263749,3264565-3265175,3265966-3266143 27 7.5
04_04_1537 - 34235360-34235486,34236107-34236234,34236344-342364... 27 7.5
01_06_1772 - 39790133-39791734 27 7.5
01_01_0853 + 6658237-6658531,6658683-6658823,6658969-6659238,665... 27 7.5
09_03_0034 + 11751965-11752010,11752138-11752205,11753142-117532... 27 9.9
07_01_0374 - 2788576-2788704,2788991-2789105,2789143-2789156 27 9.9
06_03_1146 - 28004896-28005554,28005664-28005844 27 9.9
06_01_0432 - 3073380-3074474,3075922-3075989,3076467-3076773 27 9.9
>09_06_0280 + 22010270-22011407,22011890-22013097
Length = 781
Score = 32.3 bits (70), Expect = 0.26
Identities = 20/77 (25%), Positives = 33/77 (42%), Gaps = 4/77 (5%)
Frame = +2
Query: 311 NEEVANGFSCPAPGEVSNAGSFSRHAH----PEDCRKYYICLEGVAREYGCPIGTVFKIG 478
N + AN +SCP PGE + S +++ ++ R Y+C + G + G
Sbjct: 275 NNQAANNWSCPTPGEARRSACISNNSYCHNVTDNYRSGYVCRCDDGYD-----GNPYVAG 329
Query: 479 DADGTGNCEDPEDVPGC 529
CE P++ GC
Sbjct: 330 GCQDINECERPKE-HGC 345
>10_01_0324 + 3566638-3566859,3566959-3567223,3567881-3568161
Length = 255
Score = 31.1 bits (67), Expect = 0.61
Identities = 20/74 (27%), Positives = 32/74 (43%), Gaps = 3/74 (4%)
Frame = -2
Query: 509 GLRSCRCRQHHQS*---KRYRWGNRTRGPHPRDRCNICGSLRGERDG*RIQRLIPLPGRG 339
G+ +C C+Q + K + NR +G R R + G RG G ++ +P P R
Sbjct: 150 GVFTCECKQWEHTANFDKVMKATNRGKGKRGRPRGSSRGRGRGTNVGCKVSTAVPRPTRR 209
Query: 338 KKNRSLLLRSCIPE 297
LR C+ +
Sbjct: 210 STREGPSLRRCLDD 223
>04_04_0248 - 23891684-23892064
Length = 126
Score = 31.1 bits (67), Expect = 0.61
Identities = 24/83 (28%), Positives = 35/83 (42%), Gaps = 1/83 (1%)
Frame = +3
Query: 279 ACGLTKFRNARTKK*RTVFLAPPRERYQTLDPSAVTLTPKTAANITSVSRVWP-ASTVAP 455
A T+FR+A R A R + +A+ L P A + +R+WP A+ AP
Sbjct: 39 AAAATRFRSAAAAASRMRLAAAAATRMRPAAAAAMPLLPSAA----TAARMWPPAAKAAP 94
Query: 456 SVPFSRLVMLTAPATAKTPKMFP 524
P + ATA +M P
Sbjct: 95 MHPAAATAAPLQSATASVVRMCP 117
>11_01_0282 + 2093451-2094668
Length = 405
Score = 29.9 bits (64), Expect = 1.4
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = +3
Query: 117 GHSLSLQLPLLTAQDCTVSSPMK 185
GHSL L +LTA D T +SPM+
Sbjct: 253 GHSLGAALAVLTAYDITTNSPMQ 275
>03_03_0160 + 14957139-14957603,14958054-14958113,14959012-14959776
Length = 429
Score = 29.1 bits (62), Expect = 2.4
Identities = 17/63 (26%), Positives = 24/63 (38%)
Frame = +3
Query: 345 PRERYQTLDPSAVTLTPKTAANITSVSRVWPASTVAPSVPFSRLVMLTAPATAKTPKMFP 524
P T P L P A WP T AP+V ++ AP + PK P
Sbjct: 321 PESERPTPPPPPPPLPPTPVAQHKRTEFSWPPKTTAPAV----TLLTRAPPLSSAPKQHP 376
Query: 525 DAK 533
+++
Sbjct: 377 ESE 379
>12_02_0090 + 13493311-13494180
Length = 289
Score = 28.7 bits (61), Expect = 3.2
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +3
Query: 171 SSPMKPSATCSGTAGMVKLPATSAAPDLPTTENP 272
S+P PS T + + + +PAT++AP T +P
Sbjct: 86 STPTAPSQTTAPSLATILVPATTSAPKPATASSP 119
>07_01_0626 - 4681826-4682707
Length = 293
Score = 28.7 bits (61), Expect = 3.2
Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +3
Query: 363 TLDPSAVTLTPKTAANITSVSRVWPASTVAPSVPFSRLVMLTAPA-TAKTPK 515
TL PS++T P +++ + V+PA T+ S P + + P+ + KT K
Sbjct: 40 TLGPSSITTRPAVESSLAAPEHVFPA-TMNSSTPSTTAAAIATPSPSIKTNK 90
>05_07_0293 +
29031318-29031812,29032096-29032158,29032365-29032490,
29032783-29032911,29033161-29033311,29033853-29033962,
29034502-29034607,29034697-29034894,29034988-29035030,
29035129-29035207
Length = 499
Score = 28.7 bits (61), Expect = 3.2
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 5/60 (8%)
Frame = -1
Query: 498 LPVPSASPILKTVPMGQPYS-----RATPSRQM*YLRQSSG*A*RLKDPAFDTSPGAGQE 334
+ P+ASP+L +P+ P S RA P + LR RL+DP P A +E
Sbjct: 1 MATPAASPLLLPLPLPLPASTFPPRRAVPCARRLVLRPPRAGRPRLRDPPPAAPPPAAEE 60
>05_03_0228 - 10662930-10663417,10663482-10663632
Length = 212
Score = 28.7 bits (61), Expect = 3.2
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = -1
Query: 381 RLKDPAFDTSP-GAGQEKPFATSSFLHSGTWSAHMHTRDSLS*ASPGL 241
R + P P G +P AT++ + T+S H H + LS SPGL
Sbjct: 28 RARAPGLQLPPHGPPSLQPIATAAPTATTTFSQHQHGQGILSSLSPGL 75
>04_03_0362 +
14934236-14934541,14935549-14935647,14935736-14935798,
14935878-14935940,14937242-14937362,14937472-14937872,
14937968-14938141,14938252-14938570,14938659-14938735,
14938808-14938877,14938951-14939007,14939100-14939314,
14939436-14939561,14939649-14939944,14940032-14940203,
14940300-14940398,14940471-14940602,14940692-14940792,
14941391-14941580,14941819-14941842
Length = 1034
Score = 28.7 bits (61), Expect = 3.2
Identities = 18/63 (28%), Positives = 25/63 (39%)
Frame = +2
Query: 209 CWNGEASRYQCSPGLAYDRESRVCMWADQVPECKNEEVANGFSCPAPGEVSNAGSFSRHA 388
CW G + RY+CSP VCM ++P + + P EV + G H
Sbjct: 77 CWRGLSRRYKCSPERTV---LSVCMLTGEMPRVQTSRLGKN-----PIEVDSDGGEDLHV 128
Query: 389 HPE 397
E
Sbjct: 129 DYE 131
>12_01_0744 - 6688631-6688660,6689032-6690603,6690697-6691497
Length = 800
Score = 28.3 bits (60), Expect = 4.3
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +3
Query: 363 TLDPSAVTLTPKTAANITSVSRVWPASTVAPSVP-FSRLVMLTAPATAKTPKMFPD 527
T+ PS+ T P + + RV+PA+T A SVP + M+T+ +T K D
Sbjct: 155 TMVPSSATARPVAKSTAAAPERVFPATT-ASSVPSITSAAMVTSVPFNETKKADAD 209
>11_06_0655 -
25923171-25923185,25923208-25923432,25923865-25924324,
25924330-25924985
Length = 451
Score = 28.3 bits (60), Expect = 4.3
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +3
Query: 363 TLDPSAVTLTPKTAANITSVSRVWPASTVAPSVP-FSRLVMLTAPATAKTPKMFPD 527
T+ PS+ T P + + RV+PA+T A SVP + M+T+ +T K D
Sbjct: 134 TMVPSSATARPVAKSTAAAPERVFPATT-ASSVPSITSAAMVTSVPFNETKKAETD 188
>07_03_0327 +
16817149-16817438,16818029-16818224,16818309-16819642,
16819925-16820097,16820257-16820503,16820599-16820893,
16820934-16820982,16821357-16821562
Length = 929
Score = 28.3 bits (60), Expect = 4.3
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = +1
Query: 250 TCLRQRIPCVHV-G*PSSGMQERRSSERFFLPRPGRGIKRW-ILQPSRSPRRLPQ 408
+CLR IPC+ G P SS+ + RP + L+P P++LPQ
Sbjct: 283 SCLRGNIPCIRTEGPPIKLYLPDSSSDNAIVLRPVNEVSAVDALEPLLPPKKLPQ 337
>04_04_1499 -
34006999-34007232,34007371-34007440,34007580-34007637,
34007940-34007979,34008183-34008259,34008366-34008582,
34008703-34009266
Length = 419
Score = 28.3 bits (60), Expect = 4.3
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +2
Query: 104 ECGERTQLEPPITTPHCTRLYGIF 175
+ GERT L PP H R++G+F
Sbjct: 144 DSGERTPLPPPSQQQHQDRIHGLF 167
>03_05_0647 + 26390924-26391259
Length = 111
Score = 28.3 bits (60), Expect = 4.3
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +1
Query: 349 GRGIKRWILQPSRSPRRLPQILHLSRGCGPRVRLPHRYRFQDW 477
GRG+ RW ++ R + P+ + G G R R P R R W
Sbjct: 64 GRGVARWRVRLERHWQEEPERRRWTDGDGARAR-PERRRMGTW 105
>02_05_1022 +
33570664-33570976,33572206-33573440,33573873-33574013,
33574242-33574796,33574914-33575015
Length = 781
Score = 28.3 bits (60), Expect = 4.3
Identities = 15/55 (27%), Positives = 26/55 (47%)
Frame = +3
Query: 363 TLDPSAVTLTPKTAANITSVSRVWPASTVAPSVPFSRLVMLTAPATAKTPKMFPD 527
T+ PS+ T P + + RV+PA+T + + M+T+ +T K D
Sbjct: 249 TMVPSSATARPAAKSTAATPERVFPATTASSIPSITSAAMVTSVPFNETKKAETD 303
>02_04_0117 + 19914704-19915830,19916575-19916860,19917047-19918258
Length = 874
Score = 28.3 bits (60), Expect = 4.3
Identities = 14/54 (25%), Positives = 20/54 (37%)
Frame = +2
Query: 335 SCPAPGEVSNAGSFSRHAHPEDCRKYYICLEGVAREYGCPIGTVFKIGDADGTG 496
+ PAPG + A H+HP C+ +C G +G G G
Sbjct: 7 AAPAPG-LLRAACLRSHSHPLQCKALELCFNVALNRLPASAGASPLLGHGHGVG 59
>11_06_0253 - 21716164-21717144
Length = 326
Score = 27.9 bits (59), Expect = 5.6
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +3
Query: 189 SATCSGTAGMVKLPATSAAPDLPTTENPVCAC 284
SA+ S +A PAT+ AP P+ + +C C
Sbjct: 288 SASASSSAPAADPPATAPAPATPSALSKLCGC 319
>06_01_0671 - 4899611-4899829,4900870-4901448
Length = 265
Score = 27.9 bits (59), Expect = 5.6
Identities = 22/79 (27%), Positives = 33/79 (41%), Gaps = 5/79 (6%)
Frame = +3
Query: 324 RTVFLAPPRERYQTLDPSAVTLTPKTAA----NITSVSRVWPASTVAPSVP-FSRLVMLT 488
R L PPR+R P + TP TAA +++ + PA PS +R+V
Sbjct: 10 RPSLLLPPRQRSSPPRPRPLLCTPSTAAFRRGALSATTTPTPARAALPSTTGRNRIVCGK 69
Query: 489 APATAKTPKMFPDAKNTMV 545
T P ++TM+
Sbjct: 70 VTTTNNYPSSCRSRRSTMM 88
>04_04_1150 + 31278367-31278885,31280065-31281278,31281759-31283355
Length = 1109
Score = 27.9 bits (59), Expect = 5.6
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = -2
Query: 524 REHLRGLRSCRCRQHHQS*KRYRWGNRTRGPHPR 423
R H R R R HH ++ R G+RTR P R
Sbjct: 136 RHHHRHHHHQRQRHHHHHQRQQRRGSRTRDPRVR 169
>04_03_0864 + 20401025-20401810
Length = 261
Score = 27.9 bits (59), Expect = 5.6
Identities = 12/39 (30%), Positives = 18/39 (46%)
Frame = +3
Query: 153 AQDCTVSSPMKPSATCSGTAGMVKLPATSAAPDLPTTEN 269
A + + P P +C G + PAT+AA P E+
Sbjct: 139 ASEAVETDPGSPKVSCFGAVRSERSPATAAAAPAPPVED 177
>11_04_0320 + 16354122-16354226,16354652-16356859
Length = 770
Score = 27.5 bits (58), Expect = 7.5
Identities = 14/40 (35%), Positives = 17/40 (42%)
Frame = +2
Query: 359 SNAGSFSRHAHPEDCRKYYICLEGVAREYGCPIGTVFKIG 478
S AG H D K C+E V YGC I ++G
Sbjct: 505 SYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLG 544
>09_04_0654 -
19247051-19247305,19247466-19247534,19247618-19247705,
19248010-19248105,19248650-19248763,19248852-19248985,
19249880-19250326
Length = 400
Score = 27.5 bits (58), Expect = 7.5
Identities = 13/42 (30%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +2
Query: 302 ECKNEEVANGFSCPAPGEV-SNAGSFSRHAHPEDCRKYYICL 424
EC+++++ + + GE S+ GS HPE+ R++ CL
Sbjct: 338 ECQHDDIVDSLTYIEEGEEKSSNGSAFAAPHPEEQRQFLHCL 379
>06_01_0457 - 3263519-3263749,3264565-3265175,3265966-3266143
Length = 339
Score = 27.5 bits (58), Expect = 7.5
Identities = 17/62 (27%), Positives = 24/62 (38%)
Frame = +2
Query: 158 RLYGIFPDETKCDVFWNCWNGEASRYQCSPGLAYDRESRVCMWADQVPECKNEEVANGFS 337
R+YG F DE K W + C P A + +CM P+ KN + +
Sbjct: 146 RIYGFF-DECKRRFNVRIWKVFTDCFNCLPVAALIDDKILCMHGGLSPDLKNMDQIRNIA 204
Query: 338 CP 343
P
Sbjct: 205 RP 206
>04_04_1537 -
34235360-34235486,34236107-34236234,34236344-34236483,
34236967-34237023,34237358-34237475,34237585-34237734,
34237857-34237941,34238040-34238104,34238351-34238500,
34238835-34238910,34239071-34239150
Length = 391
Score = 27.5 bits (58), Expect = 7.5
Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Frame = -1
Query: 378 LKDPAFDTSPGAGQEKPFAT--SSFLHSGTWSAHM 280
+K+ D P E+PF S L GTW+ HM
Sbjct: 51 IKEHRVDFEPFIEDEEPFEKYCDSMLEDGTWAGHM 85
>01_06_1772 - 39790133-39791734
Length = 533
Score = 27.5 bits (58), Expect = 7.5
Identities = 30/121 (24%), Positives = 54/121 (44%)
Frame = +3
Query: 120 HSLSLQLPLLTAQDCTVSSPMKPSATCSGTAGMVKLPATSAAPDLPTTENPVCACGLTKF 299
H+L+L+L LL + ++ + A C A AAPD + + +CA
Sbjct: 104 HALALRLALLPCRLPVANALVDLYAKCDDLPAAHTALADIAAPDAVSFNSLLCA----HA 159
Query: 300 RNARTKK*RTVFLAPPRERYQTLDPSAVTLTPKTAANITSVSRVWPASTVAPSVPFSRLV 479
R A ++F+A P R Q + +A+ + A +++S RV+ S +S L+
Sbjct: 160 RLASVPDAESLFVAMP-SRTQ-VSWNAMVVVYVNAGDVSSARRVFDQMPTRDSTSWSVLI 217
Query: 480 M 482
+
Sbjct: 218 V 218
>01_01_0853 +
6658237-6658531,6658683-6658823,6658969-6659238,
6659324-6659463,6659563-6659709,6660739-6661320
Length = 524
Score = 27.5 bits (58), Expect = 7.5
Identities = 17/53 (32%), Positives = 25/53 (47%)
Frame = -3
Query: 541 IVFFASGNIFGVFAVAGAVSITNLENGTDGATVLAGHTLETDVIFAAVFGVSV 383
I+F A +IFG + +++ + T GAT G +FA VF V V
Sbjct: 70 ILFRAPYDIFGANIIWSILTVAIMFEYTVGATFNRGFNRAVGSVFAGVFAVVV 122
>09_03_0034 +
11751965-11752010,11752138-11752205,11753142-11753252,
11753626-11753712,11753800-11754008,11754653-11754926,
11756595-11757079,11758367-11758484,11758584-11758700,
11758779-11758925,11759061-11759135,11759198-11759266,
11759914-11760024,11760183-11760267,11760404-11760501,
11760628-11760720,11760806-11760880
Length = 755
Score = 27.1 bits (57), Expect = 9.9
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = +1
Query: 370 ILQPSRSPRRLPQILHLSRGCGPRVR 447
++ PS++ R+LP++ HLS R+R
Sbjct: 609 VVHPSKALRKLPRVQHLSAQLAARMR 634
>07_01_0374 - 2788576-2788704,2788991-2789105,2789143-2789156
Length = 85
Score = 27.1 bits (57), Expect = 9.9
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = +3
Query: 336 LAPPRERYQTLDPSAVTLTPKTAANITSVSRVWPASTVAPSVPFSRLVMLTAPATAK 506
+A P+ + Q T PK+ NI + +++W ++T V F LT AK
Sbjct: 1 MAQPKTQQQQASEQQRTAHPKSTCNIAAFTKLWRSNT---CVNFDLATDLTVSKEAK 54
>06_03_1146 - 28004896-28005554,28005664-28005844
Length = 279
Score = 27.1 bits (57), Expect = 9.9
Identities = 14/52 (26%), Positives = 25/52 (48%)
Frame = +3
Query: 345 PRERYQTLDPSAVTLTPKTAANITSVSRVWPASTVAPSVPFSRLVMLTAPAT 500
P +L PS V TP + +++ ++ +T PS P + M +P+T
Sbjct: 169 PAAATPSLAPSPVATTPSPSPSVSPMAPAPAPTTSTPSSPPAPAAMAPSPST 220
>06_01_0432 - 3073380-3074474,3075922-3075989,3076467-3076773
Length = 489
Score = 27.1 bits (57), Expect = 9.9
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = +3
Query: 147 LTAQDCTVSSPMKPSATCSGTAGMVKLPATSAAP 248
LT DC +S + PS+ G AG VK TS P
Sbjct: 290 LTLLDCLHASLVPPSSEAGGGAGGVKGGKTSRIP 323
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,008,914
Number of Sequences: 37544
Number of extensions: 449785
Number of successful extensions: 1520
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1461
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1520
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1233951264
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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