Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0008_L18
         (549 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.              23   2.0  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   3.6  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    22   4.7  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    21   6.2  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    21   8.2  

>DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.
          Length = 143

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +2

Query: 164 YGIFPDETKCDVFWNC 211
           YG FP++ K   ++NC
Sbjct: 59  YGEFPEDEKLKCYFNC 74


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 13/37 (35%), Positives = 16/37 (43%)
 Frame = +3

Query: 171 SSPMKPSATCSGTAGMVKLPATSAAPDLPTTENPVCA 281
           S+     AT + T     LPA SA    P T + V A
Sbjct: 210 STDASTPATVTTTGATTTLPAASATGTGPATPSAVVA 246


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = -3

Query: 256 GKSGAALVAGSFTIPAVPEHVALGFIGEDTVQS 158
           G SGAAL+A       +PE   +  I  D +++
Sbjct: 306 GSSGAALIAALKIAKDIPEEKRMVIILPDGIRN 338



 Score = 21.0 bits (42), Expect = 8.2
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = +3

Query: 198 CSGTAGMVKLPATSAAPDLPTTENPV 275
           C G++G   + A   A D+P  +  V
Sbjct: 304 CGGSSGAALIAALKIAKDIPEEKRMV 329


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +2

Query: 77  ENCDYLHNVECGE 115
           E CDY  N+  GE
Sbjct: 40  EECDYYQNLNLGE 52


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 12/32 (37%), Positives = 14/32 (43%)
 Frame = +1

Query: 307 QERRSSERFFLPRPGRGIKRWILQPSRSPRRL 402
           QER S    +L   G G+  WI     S  RL
Sbjct: 465 QERESELVPYLENKGNGVYAWIGAGRDSDSRL 496


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,498
Number of Sequences: 438
Number of extensions: 4632
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15704448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)