Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_L17
(413 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U37429-15|AAN63412.1| 195|Caenorhabditis elegans Peroxiredoxin ... 184 2e-47
Z32683-2|CAA83619.1| 226|Caenorhabditis elegans Hypothetical pr... 159 7e-40
AC024761-15|AAM97968.1| 231|Caenorhabditis elegans Hypothetical... 54 3e-08
AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical... 28 2.3
Z31590-1|CAA83461.1| 605|Caenorhabditis elegans Hypothetical pr... 28 3.1
Z29095-4|CAA82348.3| 444|Caenorhabditis elegans Hypothetical pr... 27 4.1
Z81070-10|CAB03004.1| 163|Caenorhabditis elegans Hypothetical p... 27 5.4
Z83236-11|CAB05785.1| 489|Caenorhabditis elegans Hypothetical p... 27 7.1
Z81468-3|CAB03876.1| 489|Caenorhabditis elegans Hypothetical pr... 27 7.1
U32223-1|AAA74956.1| 489|Caenorhabditis elegans tRNA-guanine tr... 27 7.1
U23168-5|ABD63247.1| 2702|Caenorhabditis elegans Temporarily ass... 27 7.1
U23168-1|AAU87832.1| 7548|Caenorhabditis elegans Temporarily ass... 27 7.1
Z14148-3|CAA78522.1| 523|Caenorhabditis elegans hypothetical po... 26 9.4
Z14148-2|CAA78521.1| 679|Caenorhabditis elegans hypothetical po... 26 9.4
Z14148-1|CAA78520.1| 854|Caenorhabditis elegans hypothetical po... 26 9.4
Z14146-3|CAA78518.1| 523|Caenorhabditis elegans hypothetical pr... 26 9.4
Z14146-2|CAA78517.1| 679|Caenorhabditis elegans hypothetical pr... 26 9.4
Z14146-1|CAA78516.1| 854|Caenorhabditis elegans unc-33 protein. 26 9.4
AC006737-1|AAM97965.1| 854|Caenorhabditis elegans Uncoordinated... 26 9.4
>U37429-15|AAN63412.1| 195|Caenorhabditis elegans Peroxiredoxin
protein 2 protein.
Length = 195
Score = 184 bits (448), Expect = 2e-47
Identities = 83/109 (76%), Positives = 97/109 (88%)
Frame = +1
Query: 82 KPAPQFKTTAVVNGEFKDVALSDFKGKYVVLFFYPLDFTFVCPTEIIAFSERADDFRKIG 261
KPAPQFKT AVV+GEF DV+LSD+KGKYVVLFFYPLDFTFVCPTEIIAFS+RA++F+ I
Sbjct: 8 KPAPQFKTQAVVDGEFVDVSLSDYKGKYVVLFFYPLDFTFVCPTEIIAFSDRAEEFKAIN 67
Query: 262 CEVIAASTDSHFTHLAWINTSRKQGGLGPMNIPIISDKSHRISRDYGVL 408
V+AASTDS F+HLAWIN RK GGLG MNIP+++D +H+ISRDYGVL
Sbjct: 68 TVVLAASTDSVFSHLAWINQPRKHGGLGEMNIPVLADTNHQISRDYGVL 116
>Z32683-2|CAA83619.1| 226|Caenorhabditis elegans Hypothetical
protein R07E5.2 protein.
Length = 226
Score = 159 bits (386), Expect = 7e-40
Identities = 68/115 (59%), Positives = 92/115 (80%)
Frame = +1
Query: 67 PLQLTKPAPQFKTTAVVNGEFKDVALSDFKGKYVVLFFYPLDFTFVCPTEIIAFSERADD 246
PL P FK TAVV+G+FK ++ D+KGK++V+FFYPLDFTFVCPTEIIA+ +RA++
Sbjct: 32 PLGPKNTVPAFKGTAVVDGDFKVISDQDYKGKWLVMFFYPLDFTFVCPTEIIAYGDRANE 91
Query: 247 FRKIGCEVIAASTDSHFTHLAWINTSRKQGGLGPMNIPIISDKSHRISRDYGVLD 411
FR +G EV+A S DSHF+HLAW+NT RK GGLG M+IP+++D + +I+ +GVLD
Sbjct: 92 FRSLGAEVVACSCDSHFSHLAWVNTPRKDGGLGDMDIPLLADFNKKIADSFGVLD 146
>AC024761-15|AAM97968.1| 231|Caenorhabditis elegans Hypothetical
protein Y38C1AA.11 protein.
Length = 231
Score = 54.4 bits (125), Expect = 3e-08
Identities = 33/99 (33%), Positives = 54/99 (54%), Gaps = 5/99 (5%)
Frame = +1
Query: 130 KDVALSDFKGK-YVVLFFYPLDFTFVCPTEIIAFSERADDFRKIGCEVIAASTDSHFTHL 306
K+ L ++ G+ +++LF +P DFT VC TE+ + A +FRK +++A S DS TH
Sbjct: 18 KNQTLHNYIGEQWLMLFSHPADFTPVCTTELAELVKLAPEFRKRHVQILAISIDSSETHR 77
Query: 307 AW---INTSRKQGGLGP-MNIPIISDKSHRISRDYGVLD 411
W IN+ + G + II+D I + G++D
Sbjct: 78 DWAKDINSVAQLSNCGSHLPFEIIADTDRSICTELGMID 116
>AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical
protein Y111B2A.18 protein.
Length = 258
Score = 28.3 bits (60), Expect = 2.3
Identities = 19/51 (37%), Positives = 22/51 (43%)
Frame = -3
Query: 408 EDAVIARDAVRLVAYYRYVHGTETALFTGGVDPSQVGEVRVRGGGDHLAPD 256
ED A DAVR Y + FT GV P G ++ GGDH D
Sbjct: 54 EDHRDAEDAVRARDGYEFDGRRIRVEFTRGVGPRGPGGRPLQDGGDHRGGD 104
>Z31590-1|CAA83461.1| 605|Caenorhabditis elegans Hypothetical
protein R01H10.3a protein.
Length = 605
Score = 27.9 bits (59), Expect = 3.1
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = -3
Query: 288 VRGGGDHLAPDLTEVISSLRESDYLCRAYEREIKRIEE 175
V DH+ ++ E++ L + + R +ER I+ +EE
Sbjct: 555 VSAASDHVPQNMDELLEDLMKMKAVLRQHERRIRMLEE 592
>Z29095-4|CAA82348.3| 444|Caenorhabditis elegans Hypothetical
protein R10E11.5 protein.
Length = 444
Score = 27.5 bits (58), Expect = 4.1
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +1
Query: 34 FEQTIINFNRMPLQLTKPAPQFKTTAVVNGEFKDVA 141
F+ I FN P+ +TKPA + + V+ + D+A
Sbjct: 114 FKAAPIRFNAPPVPITKPAKKEENRHVITSKDDDIA 149
>Z81070-10|CAB03004.1| 163|Caenorhabditis elegans Hypothetical
protein F26E4.12 protein.
Length = 163
Score = 27.1 bits (57), Expect = 5.4
Identities = 18/55 (32%), Positives = 26/55 (47%)
Frame = +1
Query: 112 VVNGEFKDVALSDFKGKYVVLFFYPLDFTFVCPTEIIAFSERADDFRKIGCEVIA 276
V N DV+LSD+KGK V++ + E D ++K G EV+A
Sbjct: 9 VKNANGDDVSLSDYKGK-VLIIVNVASQCGLTNKNYTQLKELLDVYKKDGLEVLA 62
>Z83236-11|CAB05785.1| 489|Caenorhabditis elegans Hypothetical
protein C13B4.2 protein.
Length = 489
Score = 26.6 bits (56), Expect = 7.1
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = -3
Query: 297 EVRVRGGGDHLAPDLTEVISSLRESDYLCRAYEREIK 187
E+R+R D L +L + +SLR+ D R+ IK
Sbjct: 133 EMRIREHNDRLCHNLATLFNSLRDKDRALRSKGEPIK 169
>Z81468-3|CAB03876.1| 489|Caenorhabditis elegans Hypothetical
protein C13B4.2 protein.
Length = 489
Score = 26.6 bits (56), Expect = 7.1
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = -3
Query: 297 EVRVRGGGDHLAPDLTEVISSLRESDYLCRAYEREIK 187
E+R+R D L +L + +SLR+ D R+ IK
Sbjct: 133 EMRIREHNDRLCHNLATLFNSLRDKDRALRSKGEPIK 169
>U32223-1|AAA74956.1| 489|Caenorhabditis elegans tRNA-guanine
transglycosylase protein.
Length = 489
Score = 26.6 bits (56), Expect = 7.1
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = -3
Query: 297 EVRVRGGGDHLAPDLTEVISSLRESDYLCRAYEREIK 187
E+R+R D L +L + +SLR+ D R+ IK
Sbjct: 133 EMRIREHNDRLCHNLATLFNSLRDKDRALRSKGEPIK 169
>U23168-5|ABD63247.1| 2702|Caenorhabditis elegans Temporarily assigned
gene nameprotein 308, isoform e protein.
Length = 2702
Score = 26.6 bits (56), Expect = 7.1
Identities = 15/38 (39%), Positives = 17/38 (44%)
Frame = +1
Query: 184 PLDFTFVCPTEIIAFSERADDFRKIGCEVIAASTDSHF 297
P +FT VC TE + A FR E I D HF
Sbjct: 2180 PTEFTTVCVTEDKLLIQGAYGFRAAKEESITLDADLHF 2217
>U23168-1|AAU87832.1| 7548|Caenorhabditis elegans Temporarily assigned
gene nameprotein 308, isoform c protein.
Length = 7548
Score = 26.6 bits (56), Expect = 7.1
Identities = 15/38 (39%), Positives = 17/38 (44%)
Frame = +1
Query: 184 PLDFTFVCPTEIIAFSERADDFRKIGCEVIAASTDSHF 297
P +FT VC TE + A FR E I D HF
Sbjct: 7026 PTEFTTVCVTEDKLLIQGAYGFRAAKEESITLDADLHF 7063
>Z14148-3|CAA78522.1| 523|Caenorhabditis elegans hypothetical
polypeptide III protein.
Length = 523
Score = 26.2 bits (55), Expect = 9.4
Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Frame = -3
Query: 354 VHGTETALFTGGVDPSQVGEVR---VRGGGDHLAPDLTEVISSLRESD 220
VH TA GG Q GEVR V GG L+P+ + S + + D
Sbjct: 411 VHSVVTATIVGGKIAYQNGEVREAPVAGGFLRLSPNSPYLFSMVGQRD 458
>Z14148-2|CAA78521.1| 679|Caenorhabditis elegans hypothetical
polypeptide II protein.
Length = 679
Score = 26.2 bits (55), Expect = 9.4
Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Frame = -3
Query: 354 VHGTETALFTGGVDPSQVGEVR---VRGGGDHLAPDLTEVISSLRESD 220
VH TA GG Q GEVR V GG L+P+ + S + + D
Sbjct: 567 VHSVVTATIVGGKIAYQNGEVREAPVAGGFLRLSPNSPYLFSMVGQRD 614
>Z14148-1|CAA78520.1| 854|Caenorhabditis elegans hypothetical
polypeptide I protein.
Length = 854
Score = 26.2 bits (55), Expect = 9.4
Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Frame = -3
Query: 354 VHGTETALFTGGVDPSQVGEVR---VRGGGDHLAPDLTEVISSLRESD 220
VH TA GG Q GEVR V GG L+P+ + S + + D
Sbjct: 742 VHSVVTATIVGGKIAYQNGEVREAPVAGGFLRLSPNSPYLFSMVGQRD 789
>Z14146-3|CAA78518.1| 523|Caenorhabditis elegans hypothetical
protein.
Length = 523
Score = 26.2 bits (55), Expect = 9.4
Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Frame = -3
Query: 354 VHGTETALFTGGVDPSQVGEVR---VRGGGDHLAPDLTEVISSLRESD 220
VH TA GG Q GEVR V GG L+P+ + S + + D
Sbjct: 411 VHSVVTATIVGGKIAYQNGEVREAPVAGGFLRLSPNSPYLFSMVGQRD 458
>Z14146-2|CAA78517.1| 679|Caenorhabditis elegans hypothetical
protein.
Length = 679
Score = 26.2 bits (55), Expect = 9.4
Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Frame = -3
Query: 354 VHGTETALFTGGVDPSQVGEVR---VRGGGDHLAPDLTEVISSLRESD 220
VH TA GG Q GEVR V GG L+P+ + S + + D
Sbjct: 567 VHSVVTATIVGGKIAYQNGEVREAPVAGGFLRLSPNSPYLFSMVGQRD 614
>Z14146-1|CAA78516.1| 854|Caenorhabditis elegans unc-33 protein.
Length = 854
Score = 26.2 bits (55), Expect = 9.4
Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Frame = -3
Query: 354 VHGTETALFTGGVDPSQVGEVR---VRGGGDHLAPDLTEVISSLRESD 220
VH TA GG Q GEVR V GG L+P+ + S + + D
Sbjct: 742 VHSVVTATIVGGKIAYQNGEVREAPVAGGFLRLSPNSPYLFSMVGQRD 789
>AC006737-1|AAM97965.1| 854|Caenorhabditis elegans Uncoordinated
protein 33 protein.
Length = 854
Score = 26.2 bits (55), Expect = 9.4
Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Frame = -3
Query: 354 VHGTETALFTGGVDPSQVGEVR---VRGGGDHLAPDLTEVISSLRESD 220
VH TA GG Q GEVR V GG L+P+ + S + + D
Sbjct: 742 VHSVVTATIVGGKIAYQNGEVREAPVAGGFLRLSPNSPYLFSMVGQRD 789
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,151,917
Number of Sequences: 27780
Number of extensions: 144778
Number of successful extensions: 493
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 486
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 493
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 673122114
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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