Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_L11
(574 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF078790-14|AAC26930.1| 335|Caenorhabditis elegans Hypothetical... 32 0.25
U21323-12|AAA62554.2| 354|Caenorhabditis elegans Hypothetical p... 31 0.44
Z70686-12|CAB54289.1| 2584|Caenorhabditis elegans Hypothetical p... 29 2.3
Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical p... 29 2.3
Z70686-8|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z70686-7|CAM35836.1| 1405|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z70310-9|CAB54294.1| 2584|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical pr... 29 2.3
U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical pr... 28 4.1
AF067216-1|AAC17524.1| 301|Caenorhabditis elegans Hypothetical ... 28 4.1
Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical pr... 28 5.4
Z81038-13|CAB02755.1| 971|Caenorhabditis elegans Hypothetical p... 28 5.4
Z69794-4|CAA93678.3| 654|Caenorhabditis elegans Hypothetical pr... 28 5.4
U97017-3|AAB52360.1| 199|Caenorhabditis elegans Hypothetical pr... 28 5.4
U97017-2|AAB52359.1| 281|Caenorhabditis elegans Hypothetical pr... 28 5.4
U97016-8|AAB52350.2| 779|Caenorhabditis elegans Hypothetical pr... 28 5.4
AC084154-11|AAK29874.1| 350|Caenorhabditis elegans Hypothetical... 28 5.4
Z83112-2|CAB05539.1| 391|Caenorhabditis elegans Hypothetical pr... 27 7.2
Z77666-12|CAJ43911.2| 896|Caenorhabditis elegans Hypothetical p... 27 7.2
Z77666-7|CAB01228.1| 1221|Caenorhabditis elegans Hypothetical pr... 27 7.2
Z70213-9|CAA94177.1| 1520|Caenorhabditis elegans Hypothetical pr... 27 7.2
Z49069-5|CAA88867.1| 1520|Caenorhabditis elegans Hypothetical pr... 27 7.2
L23648-7|AAA28031.2| 962|Caenorhabditis elegans Abnormal cell l... 27 7.2
AF125964-4|ABA03109.1| 414|Caenorhabditis elegans Hypothetical ... 27 7.2
AF104917-1|AAD22772.1| 962|Caenorhabditis elegans LIN-36 protein. 27 7.2
AF047655-3|ABD63244.1| 414|Caenorhabditis elegans Hypothetical ... 27 7.2
AF025465-11|AAB71024.1| 411|Caenorhabditis elegans Hypothetical... 27 7.2
AF016422-3|AAG24173.1| 411|Caenorhabditis elegans Hypothetical ... 27 7.2
AC024831-4|ABD63212.1| 355|Caenorhabditis elegans Hypothetical ... 27 7.2
Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical pr... 27 9.5
AC025716-14|AAK39603.1| 227|Caenorhabditis elegans Hypothetical... 27 9.5
>AF078790-14|AAC26930.1| 335|Caenorhabditis elegans Hypothetical
protein F36H12.3 protein.
Length = 335
Score = 32.3 bits (70), Expect = 0.25
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +3
Query: 366 EETKPKPDDKVKADEKTPEPKSAEPKP 446
EE K + ++ K DEK EPK EPKP
Sbjct: 199 EEKKEEKKEEKKEDEKKVEPKPGEPKP 225
>U21323-12|AAA62554.2| 354|Caenorhabditis elegans Hypothetical
protein C45G9.11 protein.
Length = 354
Score = 31.5 bits (68), Expect = 0.44
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Frame = -3
Query: 362 VFGLSFCWCFFTFGLRYFF--FSFWSRIGFLFLFRNGMLCFSGFCVSYRSRLSNQFLFFI 189
V + + +C F+F + +FF FS WS + L + C FC Y+ L N + FF+
Sbjct: 276 VLHIHYIFCIFSFFINFFFLIFSIWSLVSPGSLTFTPINCLLIFCFLYQLPL-NIWGFFV 334
Query: 188 SDRLRN 171
R+
Sbjct: 335 VKSCRD 340
>Z70686-12|CAB54289.1| 2584|Caenorhabditis elegans Hypothetical
protein R11A8.7b protein.
Length = 2584
Score = 29.1 bits (62), Expect = 2.3
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +3
Query: 366 EETKPKPDDKVKADEKTPEPKSAEPKPTDVP 458
++ K K + K+K E PEP+ EP+P VP
Sbjct: 1618 KKIKKKEEKKIKKQEAEPEPE-PEPEPEPVP 1647
>Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical
protein R11A8.7a protein.
Length = 2606
Score = 29.1 bits (62), Expect = 2.3
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +3
Query: 366 EETKPKPDDKVKADEKTPEPKSAEPKPTDVP 458
++ K K + K+K E PEP+ EP+P VP
Sbjct: 1618 KKIKKKEEKKIKKQEAEPEPE-PEPEPEPVP 1647
>Z70686-8|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical
protein R11A8.7d protein.
Length = 1427
Score = 29.1 bits (62), Expect = 2.3
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +3
Query: 366 EETKPKPDDKVKADEKTPEPKSAEPKPTDVP 458
++ K K + K+K E PEP+ EP+P VP
Sbjct: 439 KKIKKKEEKKIKKQEAEPEPE-PEPEPEPVP 468
>Z70686-7|CAM35836.1| 1405|Caenorhabditis elegans Hypothetical
protein R11A8.7c protein.
Length = 1405
Score = 29.1 bits (62), Expect = 2.3
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +3
Query: 366 EETKPKPDDKVKADEKTPEPKSAEPKPTDVP 458
++ K K + K+K E PEP+ EP+P VP
Sbjct: 439 KKIKKKEEKKIKKQEAEPEPE-PEPEPEPVP 468
>Z70310-9|CAB54294.1| 2584|Caenorhabditis elegans Hypothetical protein
R11A8.7b protein.
Length = 2584
Score = 29.1 bits (62), Expect = 2.3
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +3
Query: 366 EETKPKPDDKVKADEKTPEPKSAEPKPTDVP 458
++ K K + K+K E PEP+ EP+P VP
Sbjct: 1618 KKIKKKEEKKIKKQEAEPEPE-PEPEPEPVP 1647
>Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical protein
R11A8.7a protein.
Length = 2606
Score = 29.1 bits (62), Expect = 2.3
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +3
Query: 366 EETKPKPDDKVKADEKTPEPKSAEPKPTDVP 458
++ K K + K+K E PEP+ EP+P VP
Sbjct: 1618 KKIKKKEEKKIKKQEAEPEPE-PEPEPEPVP 1647
>U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical protein
F35A5.1 protein.
Length = 1274
Score = 28.3 bits (60), Expect = 4.1
Identities = 17/66 (25%), Positives = 27/66 (40%)
Frame = +3
Query: 366 EETKPKPDDKVKADEKTPEPKSAEPKPTDVPAXXXXXXXXXXXXXXXXVPSKSKDTPAKV 545
E KPK KV A + P PK A P+ PA +P+ +++ P
Sbjct: 921 EPEKPKDAPKVAAKPRDPSPKKAVPEKE--PAKVAAKPRDLSPKKAIPIPANTQEAPPTP 978
Query: 546 NEVPLR 563
+ P++
Sbjct: 979 VKNPVK 984
Score = 27.1 bits (57), Expect = 9.5
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = +3
Query: 366 EETKPKPDDKVKADEKTPEPKSAEP 440
E KPK D K A + P PK P
Sbjct: 558 ESLKPKADTKAPAKPRDPSPKKVAP 582
>AF067216-1|AAC17524.1| 301|Caenorhabditis elegans Hypothetical
protein C35E7.9 protein.
Length = 301
Score = 28.3 bits (60), Expect = 4.1
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +3
Query: 366 EETKPKPDDKVKADEKTPEPKSAEPKP 446
EE K + ++ K DEK + K EPKP
Sbjct: 165 EEKKEEKKEEKKEDEKKEDEKKEEPKP 191
>Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical
protein F33E2.6 protein.
Length = 846
Score = 27.9 bits (59), Expect = 5.4
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +3
Query: 363 PEETKPKPDDKVKADEKTPEPKSAEPKPTDVP 458
P +T+P + K + EP EP PT+ P
Sbjct: 377 PPKTEPPTTEPPKIEPPRTEPPKTEPPPTEPP 408
>Z81038-13|CAB02755.1| 971|Caenorhabditis elegans Hypothetical
protein C25A1.10a protein.
Length = 971
Score = 27.9 bits (59), Expect = 5.4
Identities = 16/60 (26%), Positives = 19/60 (31%)
Frame = +3
Query: 363 PEETKPKPDDKVKADEKTPEPKSAEPKPTDVPAXXXXXXXXXXXXXXXXVPSKSKDTPAK 542
P KP P VK E + + E KP PA S + PAK
Sbjct: 235 PTPAKPTPKPVVKKAESSSDSSDDEKKPVAKPAPAKATPKPAAKKADSSSDSSDDEAPAK 294
>Z69794-4|CAA93678.3| 654|Caenorhabditis elegans Hypothetical
protein R03G8.3 protein.
Length = 654
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = -3
Query: 248 FSGFCVSYRSRLSNQFLFFISDR-LRNSHSRK 156
F F + +R +L N F+FF+ D LR + RK
Sbjct: 394 FHKFLIKHREQLDNSFVFFMGDHGLRFGNVRK 425
>U97017-3|AAB52360.1| 199|Caenorhabditis elegans Hypothetical
protein F47B3.5 protein.
Length = 199
Score = 27.9 bits (59), Expect = 5.4
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +3
Query: 366 EETKPKPDDKVKADEKTPEPKSAEPKPTDV 455
EE+K K K D+K+ +PK + K DV
Sbjct: 28 EESKDKEKSKKSEDKKSEDPKKEDAKKPDV 57
>U97017-2|AAB52359.1| 281|Caenorhabditis elegans Hypothetical
protein F47B3.4 protein.
Length = 281
Score = 27.9 bits (59), Expect = 5.4
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +3
Query: 366 EETKPKPDDKVKADEKTPEPKSAEPKPTDV 455
EE+K K K D+K+ +PK + K DV
Sbjct: 110 EESKDKEKSKKSEDKKSEDPKKEDAKKPDV 139
>U97016-8|AAB52350.2| 779|Caenorhabditis elegans Hypothetical
protein B0261.1 protein.
Length = 779
Score = 27.9 bits (59), Expect = 5.4
Identities = 17/60 (28%), Positives = 21/60 (35%), Gaps = 4/60 (6%)
Frame = +3
Query: 366 EETKPKPDDKVK----ADEKTPEPKSAEPKPTDVPAXXXXXXXXXXXXXXXXVPSKSKDT 533
EE+K +D+ K D P PK A + DVP PS S T
Sbjct: 687 EESKTDGEDRKKRSADVDSGGPSPKVARLEGVDVPVEDSTEVATSSTVTSSSAPSSSSST 746
>AC084154-11|AAK29874.1| 350|Caenorhabditis elegans Hypothetical
protein Y22D7AR.1 protein.
Length = 350
Score = 27.9 bits (59), Expect = 5.4
Identities = 17/34 (50%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Frame = +3
Query: 363 PE-ETKPKPDDKVKADEKTPEPK-SAEPKPTDVP 458
PE + KPKPD K K K P+PK PKP P
Sbjct: 173 PEPKPKPKPDPKPKPKPK-PKPKPKPNPKPEPKP 205
Score = 27.9 bits (59), Expect = 5.4
Identities = 16/31 (51%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Frame = +3
Query: 369 ETKPKPDDKVKADEK-TPEPKSAEPKPTDVP 458
E KPKP K K K P PK EPKP P
Sbjct: 218 EPKPKPKPKPKPKPKPNPNPK-PEPKPKPKP 247
Score = 27.5 bits (58), Expect = 7.2
Identities = 15/28 (53%), Positives = 17/28 (60%)
Frame = +3
Query: 375 KPKPDDKVKADEKTPEPKSAEPKPTDVP 458
KPKP K K + K PEPK +PKP P
Sbjct: 188 KPKPKPKPKPNPK-PEPK-PKPKPEPKP 213
Score = 27.5 bits (58), Expect = 7.2
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +3
Query: 369 ETKPKPDDKVKADEKTPEPKSAEPKP 446
E KPKP K K + K +EPKP
Sbjct: 240 EPKPKPKPKPKPEPKPKTKLKSEPKP 265
Score = 27.1 bits (57), Expect = 9.5
Identities = 13/29 (44%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = +3
Query: 375 KPKPDDKVKADEKTPEPK-SAEPKPTDVP 458
+PKP K+K++ K P+PK +PKP P
Sbjct: 252 EPKPKTKLKSEPK-PKPKLKPKPKPNPKP 279
>Z83112-2|CAB05539.1| 391|Caenorhabditis elegans Hypothetical
protein K02B7.2 protein.
Length = 391
Score = 27.5 bits (58), Expect = 7.2
Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = +3
Query: 150 MAFAAVTIAK--PVADEKQELVAQPTSVADTKTTE 248
M+F +AK P+ +EK +LV +PT +TTE
Sbjct: 37 MSFLEKLVAKYEPIKEEKPKLVPKPTRKRQPETTE 71
>Z77666-12|CAJ43911.2| 896|Caenorhabditis elegans Hypothetical
protein K08E7.5c protein.
Length = 896
Score = 27.5 bits (58), Expect = 7.2
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +3
Query: 375 KPKPDDKVKADEKTPEPKSAEPKPTD 452
K KPDDK ++ EP +++P P+D
Sbjct: 351 KTKPDDKPYEIPRSIEPSNSKPYPSD 376
>Z77666-7|CAB01228.1| 1221|Caenorhabditis elegans Hypothetical
protein K08E7.5a protein.
Length = 1221
Score = 27.5 bits (58), Expect = 7.2
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +3
Query: 375 KPKPDDKVKADEKTPEPKSAEPKPTD 452
K KPDDK ++ EP +++P P+D
Sbjct: 676 KTKPDDKPYEIPRSIEPSNSKPYPSD 701
>Z70213-9|CAA94177.1| 1520|Caenorhabditis elegans Hypothetical protein
K12D12.1 protein.
Length = 1520
Score = 27.5 bits (58), Expect = 7.2
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +3
Query: 366 EETKPKPDDKVKADEKTPEPKSAEPK 443
EE + KP K K PK+AEPK
Sbjct: 1424 EEAEKKPSTSKKPSPKKAAPKTAEPK 1449
>Z49069-5|CAA88867.1| 1520|Caenorhabditis elegans Hypothetical protein
K12D12.1 protein.
Length = 1520
Score = 27.5 bits (58), Expect = 7.2
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +3
Query: 366 EETKPKPDDKVKADEKTPEPKSAEPK 443
EE + KP K K PK+AEPK
Sbjct: 1424 EEAEKKPSTSKKPSPKKAAPKTAEPK 1449
>L23648-7|AAA28031.2| 962|Caenorhabditis elegans Abnormal cell
lineage protein 36 protein.
Length = 962
Score = 27.5 bits (58), Expect = 7.2
Identities = 9/19 (47%), Positives = 16/19 (84%)
Frame = +3
Query: 381 KPDDKVKADEKTPEPKSAE 437
+P+DKV + E+TPEP +++
Sbjct: 619 EPEDKVTSSEQTPEPTTSQ 637
>AF125964-4|ABA03109.1| 414|Caenorhabditis elegans Hypothetical
protein W03G1.3 protein.
Length = 414
Score = 27.5 bits (58), Expect = 7.2
Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = +3
Query: 150 MAFAAVTIAK--PVADEKQELVAQPTSVADTKTTE 248
M+F +AK P+ +EK +LV +PT +TTE
Sbjct: 1 MSFLEKLVAKYEPIKEEKPKLVPKPTRKRQPETTE 35
>AF104917-1|AAD22772.1| 962|Caenorhabditis elegans LIN-36 protein.
Length = 962
Score = 27.5 bits (58), Expect = 7.2
Identities = 9/19 (47%), Positives = 16/19 (84%)
Frame = +3
Query: 381 KPDDKVKADEKTPEPKSAE 437
+P+DKV + E+TPEP +++
Sbjct: 619 EPEDKVTSSEQTPEPTTSQ 637
>AF047655-3|ABD63244.1| 414|Caenorhabditis elegans Hypothetical
protein C17B7.13 protein.
Length = 414
Score = 27.5 bits (58), Expect = 7.2
Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = +3
Query: 150 MAFAAVTIAK--PVADEKQELVAQPTSVADTKTTE 248
M+F +AK P+ +EK +LV +PT +TTE
Sbjct: 1 MSFLEKLVAKYEPIKEEKPKLVPKPTRKRQPETTE 35
>AF025465-11|AAB71024.1| 411|Caenorhabditis elegans Hypothetical
protein K02E7.2 protein.
Length = 411
Score = 27.5 bits (58), Expect = 7.2
Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = +3
Query: 150 MAFAAVTIAK--PVADEKQELVAQPTSVADTKTTE 248
M+F +AK P+ +EK +LV +PT +TTE
Sbjct: 1 MSFLEKLVAKYEPIKEEKPKLVPKPTRKRQPETTE 35
>AF016422-3|AAG24173.1| 411|Caenorhabditis elegans Hypothetical
protein R09E12.5 protein.
Length = 411
Score = 27.5 bits (58), Expect = 7.2
Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = +3
Query: 150 MAFAAVTIAK--PVADEKQELVAQPTSVADTKTTE 248
M+F +AK P+ +EK +LV +PT +TTE
Sbjct: 1 MSFLEKLVAKYEPIKEEKPKLVPKPTRKRQPETTE 35
>AC024831-4|ABD63212.1| 355|Caenorhabditis elegans Hypothetical
protein Y55F3C.11 protein.
Length = 355
Score = 27.5 bits (58), Expect = 7.2
Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = +3
Query: 150 MAFAAVTIAK--PVADEKQELVAQPTSVADTKTTE 248
M+F +AK P+ +EK +LV +PT +TTE
Sbjct: 1 MSFLEKLVAKYEPIKEEKPKLVPKPTRKRQPETTE 35
>Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical
protein Y49E10.10 protein.
Length = 425
Score = 27.1 bits (57), Expect = 9.5
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = +3
Query: 363 PEETKPKPDDKVKADEKTPEPKSAEPKPTDVP 458
P P P++ E T K+A P PT VP
Sbjct: 231 PAPNPPAPENTTAKVETTKPTKAAPPAPTPVP 262
>AC025716-14|AAK39603.1| 227|Caenorhabditis elegans Hypothetical
protein Y39G10AR.16 protein.
Length = 227
Score = 27.1 bits (57), Expect = 9.5
Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 3/34 (8%)
Frame = +3
Query: 369 ETKPKPDDKVKADE-KTP--EPKSAEPKPTDVPA 461
E + KP++ DE KTP +PK EP P PA
Sbjct: 138 EVEKKPEEPPVEDEAKTPPEKPKVEEPAPAPAPA 171
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,164,362
Number of Sequences: 27780
Number of extensions: 181364
Number of successful extensions: 1022
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 753
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1011
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1184216096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -