Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0008_L09
         (427 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    25   0.35 
DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.    21   4.4  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   5.8  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   5.8  
DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholi...    21   7.6  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    21   7.6  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    21   7.6  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    21   7.6  

>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 25.0 bits (52), Expect = 0.35
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = +2

Query: 14  TSISQALVELETNSDLNAQLRE 79
           T++S AL EL  N D+  +LRE
Sbjct: 311 TTMSNALYELALNQDVQKKLRE 332


>DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.
          Length = 471

 Score = 21.4 bits (43), Expect = 4.4
 Identities = 6/19 (31%), Positives = 12/19 (63%)
 Frame = -3

Query: 212 NFFSNSRTSMIWIFWNAFS 156
           + F+   T  +W+FW +F+
Sbjct: 210 DIFAMIGTIFLWLFWPSFN 228


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.0 bits (42), Expect = 5.8
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +3

Query: 96  AREIELHNKKSFIIY 140
           A  +ELHN   F IY
Sbjct: 465 AYNVELHNSSPFSIY 479


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.0 bits (42), Expect = 5.8
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +3

Query: 96  AREIELHNKKSFIIY 140
           A  +ELHN   F IY
Sbjct: 503 AYNVELHNSSPFSIY 517


>DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholine
           receptor alpha9subunit protein.
          Length = 431

 Score = 20.6 bits (41), Expect = 7.6
 Identities = 6/21 (28%), Positives = 10/21 (47%)
 Frame = -1

Query: 337 WRHIQKSVSWNGAFSVCWLHV 275
           WRH    + W   F V + ++
Sbjct: 401 WRHFAAIIEWLSFFIVIFTYI 421


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 20.6 bits (41), Expect = 7.6
 Identities = 6/16 (37%), Positives = 10/16 (62%)
 Frame = -1

Query: 316 VSWNGAFSVCWLHVSC 269
           + WN AF++    +SC
Sbjct: 509 IRWNSAFAIAPAVISC 524



 Score = 20.6 bits (41), Expect = 7.6
 Identities = 10/34 (29%), Positives = 15/34 (44%)
 Frame = -3

Query: 308 ERGLFCLLATRVLWLGLGRILRSPTNTTCLPLNF 207
           E  +  L    V +L    +L +PT  TC+   F
Sbjct: 552 ELTIILLAGVLVCYLNTFLLLATPTTVTCILQRF 585


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 20.6 bits (41), Expect = 7.6
 Identities = 7/18 (38%), Positives = 9/18 (50%)
 Frame = -1

Query: 304 GAFSVCWLHVSCGWAWAG 251
           G F +CWL       W+G
Sbjct: 342 GVFIICWLPFFVVNLWSG 359


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 20.6 bits (41), Expect = 7.6
 Identities = 6/16 (37%), Positives = 10/16 (62%)
 Frame = -1

Query: 316 VSWNGAFSVCWLHVSC 269
           + WN AF++    +SC
Sbjct: 599 IRWNSAFAIAPAVISC 614



 Score = 20.6 bits (41), Expect = 7.6
 Identities = 10/34 (29%), Positives = 15/34 (44%)
 Frame = -3

Query: 308 ERGLFCLLATRVLWLGLGRILRSPTNTTCLPLNF 207
           E  +  L    V +L    +L +PT  TC+   F
Sbjct: 642 ELTIILLAGVLVCYLNTFLLLATPTTVTCILQRF 675


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,195
Number of Sequences: 438
Number of extensions: 2890
Number of successful extensions: 14
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10997463
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)