Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_L08
(621 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_05_0562 - 23307526-23307875,23308149-23308452,23308543-23308647 33 0.14
11_01_0421 + 3236798-3237144,3237356-3237441,3237741-3237895,323... 32 0.42
02_04_0175 + 20642877-20643618,20643844-20643955,20644052-206441... 32 0.42
03_01_0408 + 3151984-3152666,3156061-3156368,3157594-3157946 31 0.74
12_02_1099 - 26072301-26072468,26072642-26072751,26072966-260730... 31 0.97
09_06_0083 + 20753191-20754480 31 0.97
06_02_0203 + 12986685-12988691 31 0.97
01_06_1406 - 37073548-37073822,37073892-37074111,37074200-370742... 31 0.97
01_06_0352 + 28638453-28639391,28639486-28640034,28640388-286411... 31 0.97
12_02_0045 + 12824766-12825417,12826608-12826753,12826825-128269... 30 1.3
06_03_1156 - 28069663-28070393,28070966-28071231,28072023-28072909 30 1.7
05_03_0458 + 14280953-14281866,14281964-14282912 30 1.7
02_01_0521 + 3768072-3768239,3768280-3768337,3769197-3769659,376... 30 1.7
12_01_0861 + 8153108-8153266,8154633-8155136 29 2.3
12_01_0011 + 90859-91169,92075-92622,92701-92803,92899-92998,934... 29 3.0
11_01_0011 + 95001-95311,96217-96764,96843-96945,97041-97140,975... 29 3.0
08_02_1326 - 26158279-26159712 29 3.0
06_03_1078 + 27418886-27419215 29 3.0
05_04_0144 + 18389877-18390431 29 3.0
02_04_0192 + 20795659-20796309 29 3.0
12_01_0089 - 707260-707317,707626-708050,708663-709621,710223-71... 29 3.9
11_01_0088 - 662984-663024,663743-663774,664079-664503,665048-66... 29 3.9
10_08_0495 - 18318028-18320399,18322450-18322981,18323097-183232... 29 3.9
10_01_0327 + 3580771-3581223 28 5.2
04_03_1022 - 21778315-21779007 28 5.2
04_03_0191 - 12452369-12452499,12452875-12453077,12453641-124538... 28 5.2
03_05_0924 + 28861561-28861692,28861970-28862262,28862841-28863657 28 5.2
01_03_0259 - 14312197-14312259,14312384-14312456,14312651-143127... 28 5.2
09_04_0036 + 13974930-13975062,13975156-13975285,13975362-13975938 28 6.9
08_02_0099 + 12343518-12343678,12344193-12344393,12344669-123448... 28 6.9
07_03_0472 - 18519169-18519285,18519561-18519671,18520689-185208... 28 6.9
06_03_1105 - 27634787-27636025 28 6.9
06_01_0336 + 2427017-2427121,2427585-2427662,2427889-2427960,242... 28 6.9
05_03_0039 - 7621613-7622695 28 6.9
03_04_0133 + 17585278-17585282,17586257-17586386,17587444-175875... 28 6.9
02_05_0788 + 31758119-31758384,31758482-31758634,31759385-317595... 28 6.9
01_01_0187 + 1624159-1624279,1624530-1624590,1625118-1625574 28 6.9
01_01_0161 - 1385408-1385566,1385815-1385943,1386164-1386322,138... 28 6.9
01_01_0046 - 331758-332627 28 6.9
09_04_0394 - 17261008-17262476,17262554-17262743 27 9.1
07_03_0483 - 18605176-18606118,18606353-18606482,18606609-18606738 27 9.1
06_03_0430 - 20710951-20711033,20711572-20712055 27 9.1
06_01_1116 + 9197761-9199956 27 9.1
06_01_0493 - 3536207-3537056,3537603-3537826,3538234-3538503,353... 27 9.1
04_03_0689 + 18746735-18748296,18748401-18748485 27 9.1
01_07_0387 - 43224718-43224810,43224990-43225070,43225676-432257... 27 9.1
01_01_0254 - 2074095-2074100,2074389-2074462,2074572-2074633,207... 27 9.1
>01_05_0562 - 23307526-23307875,23308149-23308452,23308543-23308647
Length = 252
Score = 33.5 bits (73), Expect = 0.14
Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = -2
Query: 233 RCTGDAWSK-PLEMKLKPPSTVQCKTQIFHTGPRPDPVPTDRDARSGGRPAPRP 75
+C D +K P K +C + FH GP+P P P + + +P P+P
Sbjct: 125 KCVDDWCAKLPPYSSAKVQCYKKCGDKCFHHGPKPGPKPKPKPSPPKPKPGPKP 178
>11_01_0421 +
3236798-3237144,3237356-3237441,3237741-3237895,
3237971-3238035,3238180-3238363,3238785-3239048,
3239141-3239224,3239727-3239984,3240214-3240472,
3240550-3240755,3240896-3240946,3241041-3241337
Length = 751
Score = 31.9 bits (69), Expect = 0.42
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = -1
Query: 393 AEPATIPPRHYESVHSPLPRHGSSENAGRHCRYRAVSAEHPQC 265
A P+ IP H E +P+HGSS+ G H R + + C
Sbjct: 455 ANPSEIPVVHIEQHVMVVPQHGSSKRLGHHLDLRLIRNQWILC 497
>02_04_0175 +
20642877-20643618,20643844-20643955,20644052-20644174,
20644258-20644509,20644510-20644639,20644719-20644928,
20645280-20645426
Length = 571
Score = 31.9 bits (69), Expect = 0.42
Identities = 34/128 (26%), Positives = 49/128 (38%), Gaps = 2/128 (1%)
Frame = -2
Query: 431 ILCLSALTSERRKRSPPPSLLATMNLYTVRSHGMDPARTQAATVDIVRYPRN-TLSAIAN 255
+LCL A RR+R P S + + V + +P + +A DI P T +A A
Sbjct: 38 VLCLLASRRRRRRRGPNTSPVQQL---PVSAPPKNPQKVKAPK-DIQEVPAQATAAAAAK 93
Query: 254 ISGTEGCRCTGDAWSKP-LEMKLKPPSTVQCKTQIFHTGPRPDPVPTDRDARSGGRPAPR 78
+ + P + PP TVQ T H P+P + G AP
Sbjct: 94 TPLAQVLQMPAPPPPPPPMAAAAPPPETVQIATGKEHRITYPEPPHRSGSSSHGSGEAPS 153
Query: 77 PMEMQGLG 54
E+ LG
Sbjct: 154 VPEVSHLG 161
>03_01_0408 + 3151984-3152666,3156061-3156368,3157594-3157946
Length = 447
Score = 31.1 bits (67), Expect = 0.74
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = -1
Query: 135 PGPGTHRPRCSLRGAARPKAHGNAGPRSYGPPP 37
PGPG P S A RP PR PPP
Sbjct: 46 PGPGARNPAASSAAAFRPPPQPQQQPRVETPPP 78
>12_02_1099 -
26072301-26072468,26072642-26072751,26072966-26073014,
26073081-26073495,26073604-26074019
Length = 385
Score = 30.7 bits (66), Expect = 0.97
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +1
Query: 76 GLGAGRPPERASRSVGTGSGRG 141
G G+G PP RA RS+G +GRG
Sbjct: 77 GRGSGLPPIRAPRSLGVRAGRG 98
>09_06_0083 + 20753191-20754480
Length = 429
Score = 30.7 bits (66), Expect = 0.97
Identities = 33/131 (25%), Positives = 41/131 (31%), Gaps = 2/131 (1%)
Frame = -3
Query: 463 PPPIAETLPLSSSAFRL*PPRGESGARHHPSSPL*ICTQSAPTAWIQRERRPPL*ISCGI 284
PPP A+ P + L PP P PL APTA++ PP+ +
Sbjct: 246 PPPPADATPATPD-LPLPPPPPADTYPVSPDQPLYSSPPPAPTAFVPHTPLPPVDVPALS 304
Query: 283 RGTP--SVPSPIYXXXXXXXXXAMHGPSPWK*SSNHHRPCSVRPRYFILVLARTRYPPTE 110
P PS G P + S HH P P + P
Sbjct: 305 PPLPHGKTPSGAPGGIALPPAAPAGGGMPQQHGSPHHLPLGASPPPEAAAVPDALAPSAG 364
Query: 109 MLAPGGGPPQG 77
A GG P G
Sbjct: 365 HGAAAGGLPIG 375
>06_02_0203 + 12986685-12988691
Length = 668
Score = 30.7 bits (66), Expect = 0.97
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = -1
Query: 402 EAKAEPATIPPRHYESVHSPLPRHGSSENAG 310
E K P PP + VH+P PR S+E AG
Sbjct: 573 EPKVGPCPRPPLDFPPVHAPSPRSRSTELAG 603
>01_06_1406 -
37073548-37073822,37073892-37074111,37074200-37074246,
37074404-37074576,37075161-37075238,37075751-37075813,
37075889-37075961,37076150-37076189,37076302-37076368,
37076719-37078472,37079128-37079230,37080041-37080078,
37080221-37080347,37081944-37082152
Length = 1088
Score = 30.7 bits (66), Expect = 0.97
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = -2
Query: 191 LKPPSTVQCKTQIFHTGPRPDPVP-TDRDARSGGRPAPRPMEMQGL 57
L P+ V C I + P +PV T R R GRP +P+E++GL
Sbjct: 271 LVSPAVVSCDIAIAYPMPTVNPVESTPRKGR--GRPRKKPVEIKGL 314
>01_06_0352 +
28638453-28639391,28639486-28640034,28640388-28641195,
28641279-28641389,28641556-28641683
Length = 844
Score = 30.7 bits (66), Expect = 0.97
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +1
Query: 76 GLGAGRPPERASRSVGTGSGRG 141
G G+G PP RA RS+G +GRG
Sbjct: 77 GRGSGLPPIRAPRSLGVRAGRG 98
>12_02_0045 +
12824766-12825417,12826608-12826753,12826825-12826935,
12827854-12828441
Length = 498
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/30 (50%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = +1
Query: 94 PPERASRSVGTGSGRGPV*NIW-VLHCTVD 180
PP RAS S G G+GR P W CT+D
Sbjct: 108 PPARASTSSGCGAGRPPTERKWSCAACTLD 137
>06_03_1156 - 28069663-28070393,28070966-28071231,28072023-28072909
Length = 627
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/51 (25%), Positives = 22/51 (43%)
Frame = -1
Query: 456 PSPKHFLSHPLPFGSDLREAKAEPATIPPRHYESVHSPLPRHGSSENAGRH 304
P P + HP P+ + L + +PP + ++S LP H + H
Sbjct: 21 PPPPQYPHHPPPYAAPLPQYAPYARGMPPPQAQQLYSHLPPHQQPPHFAAH 71
>05_03_0458 + 14280953-14281866,14281964-14282912
Length = 620
Score = 29.9 bits (64), Expect = 1.7
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = -2
Query: 185 PPSTVQCKTQIFHTGPRPDPVPTDRDARSGGRPAPRP 75
PP+T+ C + H P P P PT + S P P P
Sbjct: 79 PPTTLSCSS---HPTPPPPPSPTTSPSASSLPPVPTP 112
>02_01_0521 +
3768072-3768239,3768280-3768337,3769197-3769659,
3769736-3769990,3770763-3770934,3772260-3772910,
3773659-3774045,3774123-3774155,3774239-3774307,
3774388-3774463,3775135-3775223,3775442-3775615,
3775693-3775821
Length = 907
Score = 29.9 bits (64), Expect = 1.7
Identities = 16/33 (48%), Positives = 21/33 (63%), Gaps = 3/33 (9%)
Frame = +1
Query: 376 DGGGLRFRLSEVR---AERQRMREEVFRRWEED 465
D G +R R+ E R AER+R E+ RRWEE+
Sbjct: 421 DKGLMRKRIEEQRRREAERRRQLEKDMRRWEEE 453
>12_01_0861 + 8153108-8153266,8154633-8155136
Length = 220
Score = 29.5 bits (63), Expect = 2.3
Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 3/50 (6%)
Frame = -3
Query: 397 ESGARHHPSSPL*ICTQS---APTAWIQRERRPPL*ISCGIRGTPSVPSP 257
E GA H PSS L +S +P+ Q P L +S G+ P P P
Sbjct: 79 EKGAHHPPSSQLRAAPRSLLSSPSPHCQEGHDPRLCVSAGLVAIPRCPPP 128
>12_01_0011 +
90859-91169,92075-92622,92701-92803,92899-92998,
93453-93529,93608-93686,94108-94226,94330-94423
Length = 476
Score = 29.1 bits (62), Expect = 3.0
Identities = 20/52 (38%), Positives = 24/52 (46%)
Frame = +3
Query: 315 RSRWIHAVGADCVQIHSGEEGWWRAPLSPLGGQSRKAEDERGSVSAMGGGPG 470
R R +H D V+ G G W + LS S K E+E GS S GG G
Sbjct: 29 RVRRVHCHDDDNVE-EGG--GGWDSSLSDFAWSSSKDEEEEGSTSTEGGEYG 77
>11_01_0011 +
95001-95311,96217-96764,96843-96945,97041-97140,
97595-97671,97750-97828,98250-98368,98472-98565
Length = 476
Score = 29.1 bits (62), Expect = 3.0
Identities = 20/52 (38%), Positives = 24/52 (46%)
Frame = +3
Query: 315 RSRWIHAVGADCVQIHSGEEGWWRAPLSPLGGQSRKAEDERGSVSAMGGGPG 470
R R +H D V+ G G W + LS S K E+E GS S GG G
Sbjct: 29 RVRRVHCHDDDNVE-EGG--GGWDSSLSDFAWSSSKDEEEEGSTSTEGGEYG 77
>08_02_1326 - 26158279-26159712
Length = 477
Score = 29.1 bits (62), Expect = 3.0
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +1
Query: 286 YRTISTVAACVLAGSMPWERTVYRFIVARRDGG 384
+R++ +A V G WE+ V R RRDGG
Sbjct: 90 HRSLLGSSAAVAYGGAAWEKEVRRSAAPRRDGG 122
>06_03_1078 + 27418886-27419215
Length = 109
Score = 29.1 bits (62), Expect = 3.0
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 3/35 (8%)
Frame = +3
Query: 375 GWWRAPLSPL---GGQSRKAEDERGSVSAMGGGPG 470
GWWR P+ GG R D+R + A GGG G
Sbjct: 55 GWWRQPVMVAAGGGGWRRWRGDDRRTTVADGGGRG 89
>05_04_0144 + 18389877-18390431
Length = 184
Score = 29.1 bits (62), Expect = 3.0
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = +3
Query: 375 GWWRAPLSPLGGQSRKAEDERGSVSAMGGGPG 470
G WR SP+ + D RG V A GGG G
Sbjct: 41 GGWRWRCSPMDLAAGGPRDRRGGVEAEGGGGG 72
>02_04_0192 + 20795659-20796309
Length = 216
Score = 29.1 bits (62), Expect = 3.0
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +1
Query: 229 QRQPSVPDILAMALRVFRGYRTISTVAACVLAGSMP 336
+R+P + D LA L V YR+ VAAC A + P
Sbjct: 174 RRRPRLADALAEWLSVLSLYRSCKRVAACFAAKAKP 209
>12_01_0089 -
707260-707317,707626-708050,708663-709621,710223-710408,
710502-710604,710701-710883,710932-711012,711072-711164,
711650-711832,713751-713966
Length = 828
Score = 28.7 bits (61), Expect = 3.9
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = -1
Query: 138 SPGPGTHRPRCSLRGAARPKAHGNAGPRSYGPPP 37
SP P ++ R S G +R +G AG GP P
Sbjct: 605 SPPPARYQNRRSSNGHSRNNVYGYAGTNGIGPAP 638
>11_01_0088 -
662984-663024,663743-663774,664079-664503,665048-666006,
666661-666846,666942-667044,667141-667323,667514-667606,
668092-668274,669011-669031
Length = 741
Score = 28.7 bits (61), Expect = 3.9
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = -1
Query: 138 SPGPGTHRPRCSLRGAARPKAHGNAGPRSYGPPP 37
SP P ++ R S G +R +G AG GP P
Sbjct: 513 SPPPARYQNRRSSNGHSRNNVYGYAGTNGIGPAP 546
>10_08_0495 -
18318028-18320399,18322450-18322981,18323097-18323200,
18323653-18323701,18323979-18324119,18324889-18324957,
18325048-18325137,18325301-18326251,18326831-18327502
Length = 1659
Score = 28.7 bits (61), Expect = 3.9
Identities = 17/40 (42%), Positives = 19/40 (47%)
Frame = +3
Query: 201 QGLGPCIAGAAAALSARYIGDGTEGVPRIPHDIYSGGLRS 320
QGL P AG A + R G G GVPR I G R+
Sbjct: 869 QGLAPAGAGMARRVPTRPRGGGGGGVPRSEGSIQGRGGRA 908
>10_01_0327 + 3580771-3581223
Length = 150
Score = 28.3 bits (60), Expect = 5.2
Identities = 15/60 (25%), Positives = 24/60 (40%)
Frame = -1
Query: 579 R*HLHKSKRKVTELPHTPPLEDRSDGVYSIATVVHICQVLLPSPKHFLSHPLPFGSDLRE 400
R H+ K +T P TPP + ++ Y + + PSP +P P + E
Sbjct: 12 RDHVDPPKPSLTPTPTTPPQRENNEETYELPAEFRVTSPPPPSP----PYPFPISPSMEE 67
>04_03_1022 - 21778315-21779007
Length = 230
Score = 28.3 bits (60), Expect = 5.2
Identities = 18/54 (33%), Positives = 22/54 (40%), Gaps = 3/54 (5%)
Frame = -1
Query: 456 PSPKHFLSHPLPFGSDLREAKAEPAT---IPPRHYESVHSPLPRHGSSENAGRH 304
P+P+ + HP + A A PA IPP H H P P S G H
Sbjct: 57 PAPQQWYDHPPNYHPPHTPAPA-PAPGPYIPPHHPHHHHPPTPAPAPSTTPGGH 109
>04_03_0191 -
12452369-12452499,12452875-12453077,12453641-12453835,
12454301-12454809
Length = 345
Score = 28.3 bits (60), Expect = 5.2
Identities = 15/46 (32%), Positives = 19/46 (41%)
Frame = +3
Query: 378 WWRAPLSPLGGQSRKAEDERGSVSAMGGGPGRCAXXXXXXXXXPTG 515
WWR P S + +R A R +S GGG A P+G
Sbjct: 233 WWRRPTSSV---NRGASSGRRRISCYGGGSSDAASDGRMEGEGPSG 275
>03_05_0924 + 28861561-28861692,28861970-28862262,28862841-28863657
Length = 413
Score = 28.3 bits (60), Expect = 5.2
Identities = 13/46 (28%), Positives = 22/46 (47%)
Frame = +3
Query: 234 AALSARYIGDGTEGVPRIPHDIYSGGLRSRWIHAVGADCVQIHSGE 371
A + +++ G VP + H I S G +W +V ++HS E
Sbjct: 162 ALVVQKFVEAGVSLVPALSHSISSSGRVDQWAESVEGKLEKMHSQE 207
>01_03_0259 -
14312197-14312259,14312384-14312456,14312651-14312754,
14313073-14313192,14313278-14313364,14313925-14314023,
14314110-14314203,14314298-14314368,14315258-14316040
Length = 497
Score = 28.3 bits (60), Expect = 5.2
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = -1
Query: 456 PSPKHFLSHPLPFGSDLREAKAEPATIPPRHYESVHSPLPRHGSSENA 313
PS K L+ PLP S L +A + P + PP H S + SS +A
Sbjct: 28 PSKKPKLA-PLPSSSSLADASSPPPSPPPPHPSSSSAAAQGPSSSYSA 74
>09_04_0036 + 13974930-13975062,13975156-13975285,13975362-13975938
Length = 279
Score = 27.9 bits (59), Expect = 6.9
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +1
Query: 49 IRPRPCISMGLGAGRPPERASRSVGTGSGRGPV*NIWVL 165
+ P PC +G AG P E +S S + SG G + W+L
Sbjct: 187 VLPPPCDVVGDTAGSPAESSSTST-SSSGGGGIDEEWLL 224
>08_02_0099 +
12343518-12343678,12344193-12344393,12344669-12344846,
12347201-12347463,12347596-12347874,12348045-12349182,
12349303-12349473
Length = 796
Score = 27.9 bits (59), Expect = 6.9
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +1
Query: 214 HASPVQRQPSVPDILAMALRVFRGYRTISTV 306
HA P RQ +V D++A LR F G + +
Sbjct: 578 HAEPYMRQLTVGDVVAGPLRSFNGVEKVGHI 608
>07_03_0472 -
18519169-18519285,18519561-18519671,18520689-18520816,
18520965-18521147,18521337-18521427
Length = 209
Score = 27.9 bits (59), Expect = 6.9
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = -2
Query: 200 EMKLKPPSTVQCKTQIFHTGPRPDPVPTDRDARSGGRPAPRPME 69
++K+KPP+ + + + T P P PT R SG +P M+
Sbjct: 132 KLKVKPPA--EARPRYLDTCDGPAPTPTRRIPLSGASASPSQMD 173
>06_03_1105 - 27634787-27636025
Length = 412
Score = 27.9 bits (59), Expect = 6.9
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -2
Query: 461 SSHRRNTSSLILCLSALTSERRKRSPPP 378
SSHR +TSS + + RR+ SPPP
Sbjct: 273 SSHRHSTSSSSSSRAGRSPARRRPSPPP 300
>06_01_0336 +
2427017-2427121,2427585-2427662,2427889-2427960,
2428105-2428671,2428822-2428935,2431308-2432246
Length = 624
Score = 27.9 bits (59), Expect = 6.9
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = -3
Query: 136 ARTRYPPTEMLAPGGGPPQGPW 71
+ TRYP T G GP PW
Sbjct: 434 SHTRYPSTGFTFSGSGPSSAPW 455
>05_03_0039 - 7621613-7622695
Length = 360
Score = 27.9 bits (59), Expect = 6.9
Identities = 15/47 (31%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
Frame = -2
Query: 209 KPLEMKLKPPSTVQCKTQIFHTGPRPDPVPTDR-DARSGGRPAPRPM 72
KP P V I H GP+P P P + + + P P PM
Sbjct: 261 KPYPKPKPEPKPVPKPKPIPHPGPKPKPKPDPKLEPKPHPEPKPHPM 307
>03_04_0133 +
17585278-17585282,17586257-17586386,17587444-17587591,
17587661-17587849,17587999-17589150,17589303-17589466
Length = 595
Score = 27.9 bits (59), Expect = 6.9
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = +2
Query: 302 QWRPAFSLDPCRGSGLCTDS*WRGGMVAGSAFASRRSE 415
+WRP S+ GSG C D + +GSA SE
Sbjct: 251 EWRPRISMTVPYGSGSCADLSYSSVSTSGSAPRDEDSE 288
>02_05_0788 +
31758119-31758384,31758482-31758634,31759385-31759509,
31759650-31759678,31760943-31761008,31761059-31761125,
31761226-31761370,31761404-31761451,31762014-31762182,
31762645-31762779,31762858-31763064,31763608-31763735,
31763815-31763866,31764046-31764060,31764502-31764609
Length = 570
Score = 27.9 bits (59), Expect = 6.9
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -1
Query: 531 TPPLEDRSDGVYSIATVVHICQVLLPSPKHFLSHPL 424
+P EDR IAT+ CQ ++P H HP+
Sbjct: 380 SPGFEDRMSAFVGIATLSGCCQAVIPLGSH-NDHPI 414
>01_01_0187 + 1624159-1624279,1624530-1624590,1625118-1625574
Length = 212
Score = 27.9 bits (59), Expect = 6.9
Identities = 19/65 (29%), Positives = 26/65 (40%), Gaps = 1/65 (1%)
Frame = -1
Query: 471 CQVLLP-SPKHFLSHPLPFGSDLREAKAEPATIPPRHYESVHSPLPRHGSSENAGRHCRY 295
C L P P+ P P+ L A P+ + P Y + + PRH G +
Sbjct: 94 CIPLRPVQPRLSPPQPPPYHHYLYTTTAPPSALHPMSYPATYPAPPRHQQPAAVGDYVIG 153
Query: 294 RAVSA 280
AVSA
Sbjct: 154 HAVSA 158
>01_01_0161 - 1385408-1385566,1385815-1385943,1386164-1386322,
1387228-1387571,1387641-1387905,1387998-1388075,
1388207-1388260,1389341-1389361,1389453-1389578,
1389696-1389863,1389923-1390313,1390629-1390710,
1391175-1391536,1391806-1392630,1392956-1393476
Length = 1227
Score = 27.9 bits (59), Expect = 6.9
Identities = 14/30 (46%), Positives = 15/30 (50%), Gaps = 3/30 (10%)
Frame = -1
Query: 135 PGPGTHRPRCSLRGAARP---KAHGNAGPR 55
PGP RPR G RP +HG A PR
Sbjct: 935 PGPVPPRPRAPSTGVVRPIAVSSHGTAPPR 964
>01_01_0046 - 331758-332627
Length = 289
Score = 27.9 bits (59), Expect = 6.9
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = -3
Query: 469 PGPPPIAETLPLSSSAFRL*PPRGESGARHHPSSP 365
P PPP P SSS +R PP S HP+ P
Sbjct: 21 PPPPPPPPPPPPSSSRYR--PPSPPSSRHPHPTIP 53
>09_04_0394 - 17261008-17262476,17262554-17262743
Length = 552
Score = 27.5 bits (58), Expect = 9.1
Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Frame = -1
Query: 537 PHT--PPLEDRSDGVYSIATVVHICQVLLP 454
PH PPL ++ GV+ +A +V +C LP
Sbjct: 8 PHRRPPPLPSKTSGVWPVALLVVLCFAALP 37
>07_03_0483 - 18605176-18606118,18606353-18606482,18606609-18606738
Length = 400
Score = 27.5 bits (58), Expect = 9.1
Identities = 11/36 (30%), Positives = 17/36 (47%)
Frame = -1
Query: 366 HYESVHSPLPRHGSSENAGRHCRYRAVSAEHPQCHR 259
H S S +P+H + G+ CR R ++ P R
Sbjct: 31 HGHSCWSSVPKHAGLQRCGKSCRLRWINYLRPDLKR 66
>06_03_0430 - 20710951-20711033,20711572-20712055
Length = 188
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = -1
Query: 429 PLPFGSDLREAKAEPATIPPRHYESVHSPLPRHGSSENAGR 307
P P G L+EAK E T + + P H ++ N G+
Sbjct: 85 PTPQGPKLKEAKEEERTPASSTGDGIRKPFGNHETTLNRGK 125
>06_01_1116 + 9197761-9199956
Length = 731
Score = 27.5 bits (58), Expect = 9.1
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +3
Query: 156 LGLTLHGRWWFELHFQGLGPCIAGAAAALSAR 251
LG TL + L F G PC+ AAA +SA+
Sbjct: 546 LGWTLIAKMEVHLDFNGAPPCLLIAAARISAQ 577
>06_01_0493 -
3536207-3537056,3537603-3537826,3538234-3538503,
3539042-3539146
Length = 482
Score = 27.5 bits (58), Expect = 9.1
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +1
Query: 457 EEDLADVHYGSYTIDAVRPVLQRWC 531
E+DL D Y I+++R VLQR C
Sbjct: 241 EQDLRDQFYAHGEIESIRMVLQRAC 265
>04_03_0689 + 18746735-18748296,18748401-18748485
Length = 548
Score = 27.5 bits (58), Expect = 9.1
Identities = 19/73 (26%), Positives = 33/73 (45%), Gaps = 4/73 (5%)
Frame = -1
Query: 570 LHKSKRKVTELPHTPPLEDRSDGVYSIATVVHICQVLLPSPKHFLSHPLP---FGSDLRE 400
LH+ K + E +PP R+ +Y T + +P PK+ G L +
Sbjct: 189 LHRKKVDIQEALKSPPALQRTLRIYVFNTFANQAPRTIPPPKNAEPPTWSLKIIGRVLED 248
Query: 399 -AKAEPATIPPRH 364
A+ +PA++ P+H
Sbjct: 249 GAELDPASVVPKH 261
>01_07_0387 -
43224718-43224810,43224990-43225070,43225676-43225735,
43227129-43227208,43227285-43227336,43227412-43227549,
43227627-43227944,43229381-43229438,43229520-43229629,
43230041-43230280
Length = 409
Score = 27.5 bits (58), Expect = 9.1
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = -2
Query: 122 PTDRDARSGGRPAPRPMEMQGLGLMARHLE 33
P++ + SGG+P P ++ G G + R+L+
Sbjct: 294 PSESNILSGGKPGPHKIQGIGAGFVPRNLD 323
>01_01_0254 -
2074095-2074100,2074389-2074462,2074572-2074633,
2074790-2075123,2075271-2075487,2075575-2075685,
2076304-2076840
Length = 446
Score = 27.5 bits (58), Expect = 9.1
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +3
Query: 351 VQIHSGEEGWWRAPLSPLGGQSRKAEDERGSVSA 452
V++ SG GW AP+ P S AED+ G+++A
Sbjct: 116 VELRSGAVGWGEAPVLP----SVTAEDQPGALAA 145
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,802,651
Number of Sequences: 37544
Number of extensions: 775244
Number of successful extensions: 3214
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 2864
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3201
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1502076244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -