Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_L08
(621 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK129677-1|BAC85214.1| 168|Homo sapiens protein ( Homo sapiens ... 33 0.62
AK127211-1|BAC86885.1| 163|Homo sapiens protein ( Homo sapiens ... 33 0.81
BC073832-1|AAH73832.1| 63|Homo sapiens Unknown (protein for MG... 32 1.4
BC047715-1|AAH47715.1| 338|Homo sapiens C10orf6 protein protein. 32 1.4
AL138762-3|CAH70950.1| 1173|Homo sapiens chromosome 10 open read... 32 1.4
AL138762-2|CAH70949.1| 1186|Homo sapiens chromosome 10 open read... 32 1.4
AL138762-1|CAH70948.1| 758|Homo sapiens chromosome 10 open read... 32 1.4
AL133215-19|CAI10933.1| 1173|Homo sapiens chromosome 10 open rea... 32 1.4
AL133215-18|CAI10932.1| 1186|Homo sapiens chromosome 10 open rea... 32 1.4
AL133215-17|CAI10931.1| 758|Homo sapiens chromosome 10 open rea... 32 1.4
AF460991-1|AAN84475.1| 1173|Homo sapiens C10ORF6 protein. 32 1.4
BC094799-1|AAH94799.1| 1222|Homo sapiens valosin containing prot... 32 1.9
BC051789-1|AAH51789.1| 525|Homo sapiens LOC129293 protein protein. 32 1.9
AB058753-1|BAB47479.1| 1236|Homo sapiens KIAA1850 protein protein. 32 1.9
U80759-1|AAB91450.1| 182|Homo sapiens CAGH4 alternate open read... 31 2.5
BC032612-1|AAH32612.1| 511|Homo sapiens zinc finger, CCCH-type ... 31 2.5
BC019338-1|AAH19338.1| 502|Homo sapiens ZGPAT protein protein. 31 2.5
AL121845-8|CAI21879.1| 502|Homo sapiens zinc finger, CCCH-type ... 31 2.5
AL121845-7|CAC03670.1| 511|Homo sapiens zinc finger, CCCH-type ... 31 2.5
AL121845-6|CAI21880.1| 531|Homo sapiens zinc finger, CCCH-type ... 31 2.5
AK027878-1|BAB55426.1| 531|Homo sapiens protein ( Homo sapiens ... 31 2.5
AB058750-1|BAB47476.2| 564|Homo sapiens KIAA1847 protein protein. 31 2.5
L12397-1|AAL58637.1| 350|Homo sapiens Dopamine D4 receptor prot... 31 3.3
EF560738-1|ABQ59048.1| 900|Homo sapiens CHD1L protein protein. 31 3.3
BC043501-1|AAH43501.1| 890|Homo sapiens Similar to RIKEN cDNA 4... 31 3.3
BC005038-1|AAH05038.1| 789|Homo sapiens CHD1L protein protein. 31 3.3
AL356378-7|CAH72650.1| 897|Homo sapiens chromodomain helicase D... 31 3.3
AK001342-1|BAA91637.1| 831|Homo sapiens protein ( Homo sapiens ... 31 3.3
AF537213-1|AAO49505.1| 897|Homo sapiens ALC1 protein. 31 3.3
BC038588-1|AAH38588.1| 1158|Homo sapiens AE binding protein 1 pr... 31 4.3
AF053944-1|AAC25585.1| 1158|Homo sapiens aortic carboxypeptidase... 31 4.3
AB209744-1|BAD92981.1| 1172|Homo sapiens adipocyte enhancer bind... 31 4.3
AL591682-1|CAI40398.1| 264|Homo sapiens RPEL repeat containing ... 30 5.7
AL391385-1|CAI41201.1| 264|Homo sapiens RPEL repeat containing ... 30 5.7
AL354680-1|CAI41066.1| 264|Homo sapiens RPEL repeat containing ... 30 5.7
AL008729-1|CAI95667.1| 264|Homo sapiens RPEL repeat containing ... 30 5.7
AK123661-1|BAC85671.1| 329|Homo sapiens protein ( Homo sapiens ... 30 5.7
AJ000517-1|CAA04154.1| 892|Homo sapiens spinocerebellar ataxia ... 30 5.7
AF032105-1|AAC39765.1| 892|Homo sapiens ataxin-7 protein. 30 5.7
AF032103-1|AAC19163.1| 789|Homo sapiens ataxin-7 protein. 30 5.7
Y18448-1|CAA77176.1| 3851|Homo sapiens Bassoon protein protein. 30 7.6
BC015621-1|AAH15621.1| 245|Homo sapiens C14orf32 protein protein. 30 7.6
AF052224-1|AAC83555.1| 3926|Homo sapiens neuronal double zinc fi... 30 7.6
>AK129677-1|BAC85214.1| 168|Homo sapiens protein ( Homo sapiens
cDNA FLJ26166 fis, clone ADG02852. ).
Length = 168
Score = 33.5 bits (73), Expect = 0.62
Identities = 15/32 (46%), Positives = 17/32 (53%)
Frame = -1
Query: 132 GPGTHRPRCSLRGAARPKAHGNAGPRSYGPPP 37
GP H R LRGA+ P A PR+ PPP
Sbjct: 52 GPAAHASRRGLRGASDPAARAPPPPRAPPPPP 83
>AK127211-1|BAC86885.1| 163|Homo sapiens protein ( Homo sapiens
cDNA FLJ45278 fis, clone BRHIP3001141. ).
Length = 163
Score = 33.1 bits (72), Expect = 0.81
Identities = 26/70 (37%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
Frame = +3
Query: 279 PRIPHD--IYSGGLRSRWIHAVGADCVQIHSGEEGWW-RAPLSPLGGQSRKAEDERGSVS 449
PR PH I + GLR W + C+ S W + P P SRK++ R S
Sbjct: 73 PRNPHSWGIKAHGLRPPWAPRLER-CMVPESEWAPWQPQLPCEPKWLGSRKSKPHRES-G 130
Query: 450 AMGGGPGRCA 479
GGGP RCA
Sbjct: 131 LRGGGPSRCA 140
>BC073832-1|AAH73832.1| 63|Homo sapiens Unknown (protein for
MGC:90157) protein.
Length = 63
Score = 32.3 bits (70), Expect = 1.4
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = -1
Query: 141 SSPGPGTHRPRCSLRGAARPKAHGNAGPRSYGP 43
SSP PG+ PRC LR + AH AG R+ P
Sbjct: 14 SSPAPGSSPPRCHLRPGS--TAHAAAGKRTESP 44
>BC047715-1|AAH47715.1| 338|Homo sapiens C10orf6 protein protein.
Length = 338
Score = 32.3 bits (70), Expect = 1.4
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = -1
Query: 141 SSPGPGTHRPRCSLRGAARPKAHGNAGPRSYGP 43
SSP PG+ PRC LR + AH AG R+ P
Sbjct: 14 SSPAPGSSPPRCHLRPGS--TAHAAAGKRTESP 44
>AL138762-3|CAH70950.1| 1173|Homo sapiens chromosome 10 open reading
frame 6 protein.
Length = 1173
Score = 32.3 bits (70), Expect = 1.4
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = -1
Query: 141 SSPGPGTHRPRCSLRGAARPKAHGNAGPRSYGP 43
SSP PG+ PRC LR + AH AG R+ P
Sbjct: 14 SSPAPGSSPPRCHLRPGS--TAHAAAGKRTESP 44
>AL138762-2|CAH70949.1| 1186|Homo sapiens chromosome 10 open reading
frame 6 protein.
Length = 1186
Score = 32.3 bits (70), Expect = 1.4
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = -1
Query: 141 SSPGPGTHRPRCSLRGAARPKAHGNAGPRSYGP 43
SSP PG+ PRC LR + AH AG R+ P
Sbjct: 14 SSPAPGSSPPRCHLRPGS--TAHAAAGKRTESP 44
>AL138762-1|CAH70948.1| 758|Homo sapiens chromosome 10 open reading
frame 6 protein.
Length = 758
Score = 32.3 bits (70), Expect = 1.4
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = -1
Query: 141 SSPGPGTHRPRCSLRGAARPKAHGNAGPRSYGP 43
SSP PG+ PRC LR + AH AG R+ P
Sbjct: 14 SSPAPGSSPPRCHLRPGS--TAHAAAGKRTESP 44
>AL133215-19|CAI10933.1| 1173|Homo sapiens chromosome 10 open
reading frame 6 protein.
Length = 1173
Score = 32.3 bits (70), Expect = 1.4
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = -1
Query: 141 SSPGPGTHRPRCSLRGAARPKAHGNAGPRSYGP 43
SSP PG+ PRC LR + AH AG R+ P
Sbjct: 14 SSPAPGSSPPRCHLRPGS--TAHAAAGKRTESP 44
>AL133215-18|CAI10932.1| 1186|Homo sapiens chromosome 10 open
reading frame 6 protein.
Length = 1186
Score = 32.3 bits (70), Expect = 1.4
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = -1
Query: 141 SSPGPGTHRPRCSLRGAARPKAHGNAGPRSYGP 43
SSP PG+ PRC LR + AH AG R+ P
Sbjct: 14 SSPAPGSSPPRCHLRPGS--TAHAAAGKRTESP 44
>AL133215-17|CAI10931.1| 758|Homo sapiens chromosome 10 open
reading frame 6 protein.
Length = 758
Score = 32.3 bits (70), Expect = 1.4
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = -1
Query: 141 SSPGPGTHRPRCSLRGAARPKAHGNAGPRSYGP 43
SSP PG+ PRC LR + AH AG R+ P
Sbjct: 14 SSPAPGSSPPRCHLRPGS--TAHAAAGKRTESP 44
>AF460991-1|AAN84475.1| 1173|Homo sapiens C10ORF6 protein.
Length = 1173
Score = 32.3 bits (70), Expect = 1.4
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = -1
Query: 141 SSPGPGTHRPRCSLRGAARPKAHGNAGPRSYGP 43
SSP PG+ PRC LR + AH AG R+ P
Sbjct: 14 SSPAPGSSPPRCHLRPGS--TAHAAAGKRTESP 44
>BC094799-1|AAH94799.1| 1222|Homo sapiens valosin containing protein
(p97)/p47 complex interacting protein 1 protein.
Length = 1222
Score = 31.9 bits (69), Expect = 1.9
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = -1
Query: 144 WSSPGPGTHRPRCSLRGAARPKAHGNAGPRSYGPP 40
WSS G + P ++GAA PK N P+++G P
Sbjct: 347 WSSSGRNHYIPLVGIKGAALPKLPMNLLPKAWGVP 381
>BC051789-1|AAH51789.1| 525|Homo sapiens LOC129293 protein protein.
Length = 525
Score = 31.9 bits (69), Expect = 1.9
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = -2
Query: 140 PRPDPVPTDRDARSGGRPAPRP-MEMQGLGLMARHL 36
PRP+ P R AR+GG P P + + GLG R +
Sbjct: 35 PRPEAAPRPRLARAGGHLCPTPSLRVPGLGAALRRM 70
>AB058753-1|BAB47479.1| 1236|Homo sapiens KIAA1850 protein protein.
Length = 1236
Score = 31.9 bits (69), Expect = 1.9
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = -1
Query: 144 WSSPGPGTHRPRCSLRGAARPKAHGNAGPRSYGPP 40
WSS G + P ++GAA PK N P+++G P
Sbjct: 361 WSSSGRNHYIPLVGIKGAALPKLPMNLLPKAWGVP 395
>U80759-1|AAB91450.1| 182|Homo sapiens CAGH4 alternate open reading
frame protein.
Length = 182
Score = 31.5 bits (68), Expect = 2.5
Identities = 33/106 (31%), Positives = 40/106 (37%), Gaps = 5/106 (4%)
Frame = -3
Query: 481 SAHLPGPPPIAETLPLSSSAFRL*PPRGESGARHHPSS----PL*ICTQSAPTAWIQRER 314
S H P P+ +LP S FRL P + AR PS PL +C + T R
Sbjct: 10 SPHPQEPAPLLPSLPRLSLPFRL-PWASTATARCPPSPLGSLPLMLCIPTGFTPTQPRAP 68
Query: 313 RPP-L*ISCGIRGTPSVPSPIYXXXXXXXXXAMHGPSPWK*SSNHH 179
RPP S RG + P + PW SS HH
Sbjct: 69 RPPWTPCSRPTRGCSTTQQPTQQPTAWLHLRS-RSLQPWSPSSPHH 113
>BC032612-1|AAH32612.1| 511|Homo sapiens zinc finger, CCCH-type
with G patch domain protein.
Length = 511
Score = 31.5 bits (68), Expect = 2.5
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = -2
Query: 176 TVQCKTQIFHTGPRPDPVPTDRDARSGGRPAPR 78
T+Q +T++ G P R AR GGRPAPR
Sbjct: 360 TLQKQTRVGKAGTNKPPRCRGRGARPGGRPAPR 392
>BC019338-1|AAH19338.1| 502|Homo sapiens ZGPAT protein protein.
Length = 502
Score = 31.5 bits (68), Expect = 2.5
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = -2
Query: 176 TVQCKTQIFHTGPRPDPVPTDRDARSGGRPAPR 78
T+Q +T++ G P R AR GGRPAPR
Sbjct: 351 TLQKQTRVGKAGTNKPPRCRGRGARPGGRPAPR 383
>AL121845-8|CAI21879.1| 502|Homo sapiens zinc finger, CCCH-type
with G patch domain protein.
Length = 502
Score = 31.5 bits (68), Expect = 2.5
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = -2
Query: 176 TVQCKTQIFHTGPRPDPVPTDRDARSGGRPAPR 78
T+Q +T++ G P R AR GGRPAPR
Sbjct: 351 TLQKQTRVGKAGTNKPPRCRGRGARPGGRPAPR 383
>AL121845-7|CAC03670.1| 511|Homo sapiens zinc finger, CCCH-type
with G patch domain protein.
Length = 511
Score = 31.5 bits (68), Expect = 2.5
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = -2
Query: 176 TVQCKTQIFHTGPRPDPVPTDRDARSGGRPAPR 78
T+Q +T++ G P R AR GGRPAPR
Sbjct: 360 TLQKQTRVGKAGTNKPPRCRGRGARPGGRPAPR 392
>AL121845-6|CAI21880.1| 531|Homo sapiens zinc finger, CCCH-type
with G patch domain protein.
Length = 531
Score = 31.5 bits (68), Expect = 2.5
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = -2
Query: 176 TVQCKTQIFHTGPRPDPVPTDRDARSGGRPAPR 78
T+Q +T++ G P R AR GGRPAPR
Sbjct: 380 TLQKQTRVGKAGTNKPPRCRGRGARPGGRPAPR 412
>AK027878-1|BAB55426.1| 531|Homo sapiens protein ( Homo sapiens
cDNA FLJ14972 fis, clone THYRO1000715. ).
Length = 531
Score = 31.5 bits (68), Expect = 2.5
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = -2
Query: 176 TVQCKTQIFHTGPRPDPVPTDRDARSGGRPAPR 78
T+Q +T++ G P R AR GGRPAPR
Sbjct: 380 TLQKQTRVGKAGTNKPPRCRGRGARPGGRPAPR 412
>AB058750-1|BAB47476.2| 564|Homo sapiens KIAA1847 protein protein.
Length = 564
Score = 31.5 bits (68), Expect = 2.5
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = -2
Query: 176 TVQCKTQIFHTGPRPDPVPTDRDARSGGRPAPR 78
T+Q +T++ G P R AR GGRPAPR
Sbjct: 413 TLQKQTRVGKAGTNKPPRCRGRGARPGGRPAPR 445
>L12397-1|AAL58637.1| 350|Homo sapiens Dopamine D4 receptor
protein.
Length = 350
Score = 31.1 bits (67), Expect = 3.3
Identities = 30/105 (28%), Positives = 39/105 (37%), Gaps = 5/105 (4%)
Frame = -3
Query: 469 PGPPPIAETLPLSSSAFRL*PP-----RGESGARHHPSSPL*ICTQSAPTAWIQRERRPP 305
P P P A LP PP RG G P++P C P++W RR
Sbjct: 244 PSPTPPAPRLPQDPCGPDCAPPAPGLPRGPCGPDCAPAAPGPSCCAGRPSSWCTSRRRCV 303
Query: 304 L*ISCGIRGTPSVPSPIYXXXXXXXXXAMHGPSPWK*SSNHHRPC 170
L C RG S PSP + + S +++ RPC
Sbjct: 304 LPAPCP-RGW-SAPSPGWATSTAPSTPSSTLSSTPSSATSSARPC 346
>EF560738-1|ABQ59048.1| 900|Homo sapiens CHD1L protein protein.
Length = 900
Score = 31.1 bits (67), Expect = 3.3
Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = +1
Query: 385 GLRFRL-SEVRAERQRMREEVFRRWEEDLADVHYGSYTIDAVRPVLQRW 528
G RL +E RAE R++E+ R+W L +H SY ++ V + QR+
Sbjct: 15 GFLLRLHTEGRAEAARVQEQDLRQW--GLTGIHLRSYQLEGVNWLAQRF 61
>BC043501-1|AAH43501.1| 890|Homo sapiens Similar to RIKEN cDNA
4432404A22 gene protein.
Length = 890
Score = 31.1 bits (67), Expect = 3.3
Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = +1
Query: 385 GLRFRL-SEVRAERQRMREEVFRRWEEDLADVHYGSYTIDAVRPVLQRW 528
G RL +E RAE R++E+ R+W L +H SY ++ V + QR+
Sbjct: 8 GFLLRLHTEGRAEAARVQEQDLRQW--GLTGIHLRSYQLEGVNWLAQRF 54
>BC005038-1|AAH05038.1| 789|Homo sapiens CHD1L protein protein.
Length = 789
Score = 31.1 bits (67), Expect = 3.3
Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = +1
Query: 385 GLRFRL-SEVRAERQRMREEVFRRWEEDLADVHYGSYTIDAVRPVLQRW 528
G RL +E RAE R++E+ R+W L +H SY ++ V + QR+
Sbjct: 1 GFLLRLHTEGRAEAARVQEQDLRQW--GLTGIHLRSYQLEGVNWLAQRF 47
>AL356378-7|CAH72650.1| 897|Homo sapiens chromodomain helicase DNA
binding protein 1-like protein.
Length = 897
Score = 31.1 bits (67), Expect = 3.3
Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = +1
Query: 385 GLRFRL-SEVRAERQRMREEVFRRWEEDLADVHYGSYTIDAVRPVLQRW 528
G RL +E RAE R++E+ R+W L +H SY ++ V + QR+
Sbjct: 15 GFLLRLHTEGRAEAARVQEQDLRQW--GLTGIHLRSYQLEGVNWLAQRF 61
>AK001342-1|BAA91637.1| 831|Homo sapiens protein ( Homo sapiens
cDNA FLJ10480 fis, clone NT2RP2000126, weakly similar to
POSSIBLE GLOBAL TRANSCRIPTION ACTIVATOR SNF2L. ).
Length = 831
Score = 31.1 bits (67), Expect = 3.3
Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = +1
Query: 385 GLRFRL-SEVRAERQRMREEVFRRWEEDLADVHYGSYTIDAVRPVLQRW 528
G RL +E RAE R++E+ R+W L +H SY ++ V + QR+
Sbjct: 15 GFLLRLHTEGRAEAARVQEQDLRQW--GLTGIHLRSYQLEGVNWLAQRF 61
>AF537213-1|AAO49505.1| 897|Homo sapiens ALC1 protein.
Length = 897
Score = 31.1 bits (67), Expect = 3.3
Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = +1
Query: 385 GLRFRL-SEVRAERQRMREEVFRRWEEDLADVHYGSYTIDAVRPVLQRW 528
G RL +E RAE R++E+ R+W L +H SY ++ V + QR+
Sbjct: 15 GFLLRLHTEGRAEAARVQEQDLRQW--GLTGIHLRSYQLEGVNWLAQRF 61
>BC038588-1|AAH38588.1| 1158|Homo sapiens AE binding protein 1
protein.
Length = 1158
Score = 30.7 bits (66), Expect = 4.3
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -2
Query: 140 PRPDPVPTDRDARSGGRPAPRP 75
P P+P P R A++GG+P RP
Sbjct: 58 PPPEPTPRVRKAQAGGKPGKRP 79
>AF053944-1|AAC25585.1| 1158|Homo sapiens aortic
carboxypeptidase-like protein ACLP protein.
Length = 1158
Score = 30.7 bits (66), Expect = 4.3
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -2
Query: 140 PRPDPVPTDRDARSGGRPAPRP 75
P P+P P R A++GG+P RP
Sbjct: 58 PPPEPTPRVRKAQAGGKPGKRP 79
>AB209744-1|BAD92981.1| 1172|Homo sapiens adipocyte enhancer binding
protein 1 precursor variant protein.
Length = 1172
Score = 30.7 bits (66), Expect = 4.3
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -2
Query: 140 PRPDPVPTDRDARSGGRPAPRP 75
P P+P P R A++GG+P RP
Sbjct: 72 PPPEPTPRVRKAQAGGKPGKRP 93
>AL591682-1|CAI40398.1| 264|Homo sapiens RPEL repeat containing 1
protein.
Length = 264
Score = 30.3 bits (65), Expect = 5.7
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = -3
Query: 469 PGPPPIAETLPLSSSAFRL*P 407
P P P+ E LPL SS FRL P
Sbjct: 40 PSPSPVREPLPLPSSPFRLSP 60
>AL391385-1|CAI41201.1| 264|Homo sapiens RPEL repeat containing 1
protein.
Length = 264
Score = 30.3 bits (65), Expect = 5.7
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = -3
Query: 469 PGPPPIAETLPLSSSAFRL*P 407
P P P+ E LPL SS FRL P
Sbjct: 40 PSPSPVREPLPLPSSPFRLSP 60
>AL354680-1|CAI41066.1| 264|Homo sapiens RPEL repeat containing 1
protein.
Length = 264
Score = 30.3 bits (65), Expect = 5.7
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = -3
Query: 469 PGPPPIAETLPLSSSAFRL*P 407
P P P+ E LPL SS FRL P
Sbjct: 40 PSPSPVREPLPLPSSPFRLSP 60
>AL008729-1|CAI95667.1| 264|Homo sapiens RPEL repeat containing 1
protein.
Length = 264
Score = 30.3 bits (65), Expect = 5.7
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = -3
Query: 469 PGPPPIAETLPLSSSAFRL*P 407
P P P+ E LPL SS FRL P
Sbjct: 40 PSPSPVREPLPLPSSPFRLSP 60
>AK123661-1|BAC85671.1| 329|Homo sapiens protein ( Homo sapiens
cDNA FLJ41667 fis, clone FEBRA2028366. ).
Length = 329
Score = 30.3 bits (65), Expect = 5.7
Identities = 19/63 (30%), Positives = 25/63 (39%), Gaps = 1/63 (1%)
Frame = +3
Query: 285 IPH-DIYSGGLRSRWIHAVGADCVQIHSGEEGWWRAPLSPLGGQSRKAEDERGSVSAMGG 461
+PH D + G R V + G+ WWR P + G +R G V A G
Sbjct: 146 VPHPDFLASGERPLRRVGVARGSAEESWGQRAWWRGPARRVPG-ARGRPQNPGRVEAPGH 204
Query: 462 GPG 470
PG
Sbjct: 205 APG 207
>AJ000517-1|CAA04154.1| 892|Homo sapiens spinocerebellar ataxia 7
protein.
Length = 892
Score = 30.3 bits (65), Expect = 5.7
Identities = 28/77 (36%), Positives = 32/77 (41%), Gaps = 6/77 (7%)
Frame = -1
Query: 456 PSPKHFLSHPLPFGSDLREAKAEPATIPPRHYESVHSPLP------RHGSSENAGRHCRY 295
P P H S P P G ++ + P PP H ES H PLP R S E G
Sbjct: 445 PKP-HTPSLPRPPGCPAQQGGSAPIDPPPVH-ESPHPPLPATEPASRLSSEEGEGDD--- 499
Query: 294 RAVSAEHPQCHRQYIGH 244
+ S E CH Y GH
Sbjct: 500 KEESVEKLDCH--YSGH 514
>AF032105-1|AAC39765.1| 892|Homo sapiens ataxin-7 protein.
Length = 892
Score = 30.3 bits (65), Expect = 5.7
Identities = 28/77 (36%), Positives = 32/77 (41%), Gaps = 6/77 (7%)
Frame = -1
Query: 456 PSPKHFLSHPLPFGSDLREAKAEPATIPPRHYESVHSPLP------RHGSSENAGRHCRY 295
P P H S P P G ++ + P PP H ES H PLP R S E G
Sbjct: 445 PKP-HTPSLPRPPGCPAQQGGSAPIDPPPVH-ESPHPPLPATEPASRLSSEEGEGDD--- 499
Query: 294 RAVSAEHPQCHRQYIGH 244
+ S E CH Y GH
Sbjct: 500 KEESVEKLDCH--YSGH 514
>AF032103-1|AAC19163.1| 789|Homo sapiens ataxin-7 protein.
Length = 789
Score = 30.3 bits (65), Expect = 5.7
Identities = 28/77 (36%), Positives = 32/77 (41%), Gaps = 6/77 (7%)
Frame = -1
Query: 456 PSPKHFLSHPLPFGSDLREAKAEPATIPPRHYESVHSPLP------RHGSSENAGRHCRY 295
P P H S P P G ++ + P PP H ES H PLP R S E G
Sbjct: 342 PKP-HTPSLPRPPGCPAQQGGSAPIDPPPVH-ESPHPPLPATEPASRLSSEEGEGDD--- 396
Query: 294 RAVSAEHPQCHRQYIGH 244
+ S E CH Y GH
Sbjct: 397 KEESVEKLDCH--YSGH 411
>Y18448-1|CAA77176.1| 3851|Homo sapiens Bassoon protein protein.
Length = 3851
Score = 29.9 bits (64), Expect = 7.6
Identities = 17/45 (37%), Positives = 20/45 (44%)
Frame = -2
Query: 194 KLKPPSTVQCKTQIFHTGPRPDPVPTDRDARSGGRPAPRPMEMQG 60
K+ P +T + TQ P P P RS G P P PM QG
Sbjct: 1420 KMGPRATAEFSTQT------PSPAPASDMPRSPGAPTPSPMVAQG 1458
>BC015621-1|AAH15621.1| 245|Homo sapiens C14orf32 protein protein.
Length = 245
Score = 29.9 bits (64), Expect = 7.6
Identities = 16/40 (40%), Positives = 20/40 (50%)
Frame = -1
Query: 159 PDISYWSSPGPGTHRPRCSLRGAARPKAHGNAGPRSYGPP 40
P++ Y SPGP P GAA P G P ++GPP
Sbjct: 164 PNMPY-PSPGPYPAPPPPQAPGAAPPVPWGTVPPGAWGPP 202
>AF052224-1|AAC83555.1| 3926|Homo sapiens neuronal double zinc finger
protein protein.
Length = 3926
Score = 29.9 bits (64), Expect = 7.6
Identities = 17/45 (37%), Positives = 20/45 (44%)
Frame = -2
Query: 194 KLKPPSTVQCKTQIFHTGPRPDPVPTDRDARSGGRPAPRPMEMQG 60
K+ P +T + TQ P P P RS G P P PM QG
Sbjct: 1495 KMGPRATAEFSTQT------PSPAPASDMPRSPGAPTPSPMVAQG 1533
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,646,513
Number of Sequences: 237096
Number of extensions: 3921858
Number of successful extensions: 13016
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 10978
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12998
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6691573490
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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