Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0008_L08
         (621 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB208107-1|BAE72139.1|   71|Apis mellifera Broad complex zinc fi...    23   1.8  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    22   4.2  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    22   4.2  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          21   7.3  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    21   9.7  

>AB208107-1|BAE72139.1|   71|Apis mellifera Broad complex zinc
           finger domain-Z2 isoform protein.
          Length = 71

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = -1

Query: 342 LPRHGSSENAGRHCRYRAVSAEHPQCHR 259
           L RH + ++A R   YR V  E   C R
Sbjct: 21  LKRHVADKHAERQEEYRCVICERVYCSR 48


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +1

Query: 229 QRQPSVPDILAMALRVFRGYRTISTV 306
           Q  P  PDIL   L+     RT++T+
Sbjct: 376 QNHPQHPDILRELLKKIPDLRTLNTL 401


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = +1

Query: 454 WEEDLADVHYGSYTIDAVRPV 516
           W  DLA  H  S  I A+R V
Sbjct: 476 WSNDLATEHDRSVMIQAIRVV 496


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 14/51 (27%), Positives = 19/51 (37%)
 Frame = -2

Query: 167 CKTQIFHTGPRPDPVPTDRDARSGGRPAPRPMEMQGLGLMARHLEXGPNNS 15
           C T + H G  PDP   D    +     P P     +G    HL    ++S
Sbjct: 274 CHTGLGHYGHHPDPGEVDLPPET----QPTPPSATLVGTTITHLRDPDHHS 320


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +1

Query: 55  PRPCISMGLGAGRP 96
           P P + + LGAGRP
Sbjct: 317 PFPFLMLPLGAGRP 330


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 227,656
Number of Sequences: 438
Number of extensions: 6690
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18460203
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)