Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_L06
(617 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 149 2e-36
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 149 2e-36
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 142 2e-34
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 142 2e-34
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 112 2e-25
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 112 2e-25
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 112 2e-25
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 95 4e-20
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 95 4e-20
AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical ... 75 4e-14
AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical ... 75 4e-14
AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical ... 75 4e-14
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 72 4e-13
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 72 4e-13
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 64 1e-10
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 64 1e-10
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 62 2e-10
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 62 2e-10
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 62 2e-10
EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA... 62 2e-10
EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA... 62 2e-10
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 62 2e-10
Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical pr... 61 5e-10
AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor pr... 60 9e-10
Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical pr... 60 1e-09
AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna... 58 4e-09
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 58 4e-09
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 58 5e-09
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 58 5e-09
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 58 5e-09
AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna... 58 5e-09
EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA... 57 9e-09
Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical pr... 56 3e-08
AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative RNA-... 56 3e-08
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 55 4e-08
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 55 5e-08
AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical ... 55 5e-08
AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical ... 55 5e-08
AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical ... 55 5e-08
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 54 8e-08
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 54 8e-08
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 54 8e-08
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 54 8e-08
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 54 1e-07
Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical pr... 52 3e-07
AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical... 51 6e-07
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 51 6e-07
Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical p... 51 8e-07
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 50 2e-06
Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical pr... 50 2e-06
Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical pr... 50 2e-06
AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical ... 49 2e-06
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 49 3e-06
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 48 4e-06
U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna bi... 48 4e-06
Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical pr... 47 9e-06
U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (dele... 47 9e-06
AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein. 47 9e-06
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 46 2e-05
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 46 3e-05
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 46 3e-05
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 45 4e-05
Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical pr... 44 1e-04
AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein... 44 1e-04
AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein... 44 1e-04
AC024810-13|AAK68518.1| 405|Caenorhabditis elegans Feminization... 44 1e-04
AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization... 44 1e-04
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 43 2e-04
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 43 2e-04
AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 43 2e-04
AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical... 42 5e-04
AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein. 42 5e-04
Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical p... 41 6e-04
U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical p... 41 6e-04
U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical p... 40 0.001
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 40 0.001
U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical p... 40 0.002
AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily a... 40 0.002
U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein (spl... 39 0.002
U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein (spl... 39 0.002
U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle orienta... 39 0.003
AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein. 39 0.003
Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical pr... 37 0.010
AF003141-14|AAM48549.1| 362|Caenorhabditis elegans Hypothetical... 37 0.010
AF003141-13|AAK21490.1| 549|Caenorhabditis elegans Hypothetical... 37 0.010
U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor... 37 0.013
AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing... 37 0.013
AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing... 37 0.013
AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing... 37 0.013
Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical pr... 36 0.031
U23450-1|AAK31467.2| 422|Caenorhabditis elegans Cpeb polya bind... 36 0.031
Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical pr... 35 0.040
Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical pr... 35 0.040
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 35 0.040
Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical pr... 34 0.071
Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical pr... 34 0.071
Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical pr... 34 0.071
U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical p... 34 0.071
AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical ... 34 0.071
Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical pr... 34 0.093
DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding p... 34 0.093
Z68879-10|CAA93082.2| 473|Caenorhabditis elegans Hypothetical p... 33 0.12
AF003145-3|AAB57717.1| 751|Caenorhabditis elegans Cpeb polya bi... 33 0.16
Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical pr... 32 0.29
Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical pr... 32 0.29
Z19154-9|CAA79552.2| 559|Caenorhabditis elegans Hypothetical pr... 32 0.29
Z99281-6|CAB54458.2| 625|Caenorhabditis elegans Hypothetical pr... 32 0.38
Z99281-5|CAB54457.1| 553|Caenorhabditis elegans Hypothetical pr... 32 0.38
U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein (sp... 32 0.38
U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein (spl... 32 0.38
U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein (spl... 32 0.38
AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical ... 32 0.38
Z99279-4|CAB16494.1| 121|Caenorhabditis elegans Hypothetical pr... 31 0.66
Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical pr... 31 0.66
Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical pr... 31 0.66
Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical pr... 31 0.66
Z99277-2|CAB16487.1| 557|Caenorhabditis elegans Hypothetical pr... 31 0.87
U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical pr... 31 0.87
U28944-8|AAK68193.1| 103|Caenorhabditis elegans Hypothetical pr... 29 2.0
U23484-7|ABB88232.1| 738|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z81069-1|CAB02990.1| 359|Caenorhabditis elegans Hypothetical pr... 29 2.7
CU457737-8|CAM36329.1| 811|Caenorhabditis elegans Hypothetical ... 29 3.5
Z68160-1|CAA92294.2| 489|Caenorhabditis elegans Hypothetical pr... 28 4.6
AF003140-8|AAB54169.1| 396|Caenorhabditis elegans Hypothetical ... 28 4.6
Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical pr... 28 6.1
Z19155-4|CAA79560.3| 844|Caenorhabditis elegans Hypothetical pr... 27 8.1
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 149 bits (361), Expect = 2e-36
Identities = 69/160 (43%), Positives = 100/160 (62%), Gaps = 1/160 (0%)
Frame = +3
Query: 9 RKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMA 188
+K+FVGG+S E ++++L HF+ YGE+ VK D GRSRGFAF+ F + +A
Sbjct: 29 KKIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALA 88
Query: 189 AGEHTINSKKVDPKKAKARHG-KIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKN 365
A E TI K V+ K AK+R K+FVGGL S+ S+ ++++ F FG + ++E PFDK
Sbjct: 89 AREQTIKGKSVEVKPAKSRENKKVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTK 148
Query: 366 QRKGFCFITFESEQVVNELLKTPKQTIGGKEVDVKRATPK 485
R+ F FI FE E+ ++ KQT G +E DVK+A P+
Sbjct: 149 ARRNFAFIVFEEEESADKASSQTKQTFGTRECDVKKAVPQ 188
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 149 bits (361), Expect = 2e-36
Identities = 69/160 (43%), Positives = 100/160 (62%), Gaps = 1/160 (0%)
Frame = +3
Query: 9 RKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMA 188
+K+FVGG+S E ++++L HF+ YGE+ VK D GRSRGFAF+ F + +A
Sbjct: 29 KKIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALA 88
Query: 189 AGEHTINSKKVDPKKAKARHG-KIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKN 365
A E TI K V+ K AK+R K+FVGGL S+ S+ ++++ F FG + ++E PFDK
Sbjct: 89 AREQTIKGKSVEVKPAKSRENKKVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTK 148
Query: 366 QRKGFCFITFESEQVVNELLKTPKQTIGGKEVDVKRATPK 485
R+ F FI FE E+ ++ KQT G +E DVK+A P+
Sbjct: 149 ARRNFAFIVFEEEESADKASSQTKQTFGTRECDVKKAVPQ 188
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 142 bits (343), Expect = 2e-34
Identities = 65/167 (38%), Positives = 104/167 (62%), Gaps = 9/167 (5%)
Frame = +3
Query: 12 KLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMAA 191
K+F+GGLSW+T+ + LRD+F +GE+ V DP T R+RGF FI F P S+DKV+
Sbjct: 46 KMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVLNN 105
Query: 192 GEHTINSKKVDPK---------KAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEM 344
EH ++ KK+DPK K + K+F+GGLS+ + +++K +F +G + + +
Sbjct: 106 REHELDGKKIDPKVAFPKRTQAKLVTKTKKVFIGGLSATSTLEDMKQYFETYGKVEDAML 165
Query: 345 PFDKTKNQRKGFCFITFESEQVVNELLKTPKQTIGGKEVDVKRATPK 485
FDK + +GF F+TF+S++V +++ + I GK V+ K+A PK
Sbjct: 166 MFDKATQRHRGFGFVTFDSDEVADKVCEIHFHEINGKMVECKKAQPK 212
Score = 64.5 bits (150), Expect = 6e-11
Identities = 29/79 (36%), Positives = 48/79 (60%)
Frame = +3
Query: 9 RKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMA 188
+K+F+GGLS ++ ++++ +F YG++E + D T R RGF F+ F + + DKV
Sbjct: 134 KKVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKVCE 193
Query: 189 AGEHTINSKKVDPKKAKAR 245
H IN K V+ KKA+ +
Sbjct: 194 IHFHEINGKMVECKKAQPK 212
Score = 62.5 bits (145), Expect = 2e-10
Identities = 30/97 (30%), Positives = 52/97 (53%)
Frame = +3
Query: 195 EHTINSKKVDPKKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRK 374
E +N+ D GK+F+GGLS + + + ++++F FG + E + D + +
Sbjct: 27 EARLNADSDDGSHGSQDPGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRAR 86
Query: 375 GFCFITFESEQVVNELLKTPKQTIGGKEVDVKRATPK 485
GF FITF V+++L + + GK++D K A PK
Sbjct: 87 GFGFITFVDPSSVDKVLNNREHELDGKKIDPKVAFPK 123
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 142 bits (343), Expect = 2e-34
Identities = 65/167 (38%), Positives = 104/167 (62%), Gaps = 9/167 (5%)
Frame = +3
Query: 12 KLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMAA 191
K+F+GGLSW+T+ + LRD+F +GE+ V DP T R+RGF FI F P S+DKV+
Sbjct: 46 KMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVLNN 105
Query: 192 GEHTINSKKVDPK---------KAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEM 344
EH ++ KK+DPK K + K+F+GGLS+ + +++K +F +G + + +
Sbjct: 106 REHELDGKKIDPKVAFPKRTQAKLVTKTKKVFIGGLSATSTLEDMKQYFETYGKVEDAML 165
Query: 345 PFDKTKNQRKGFCFITFESEQVVNELLKTPKQTIGGKEVDVKRATPK 485
FDK + +GF F+TF+S++V +++ + I GK V+ K+A PK
Sbjct: 166 MFDKATQRHRGFGFVTFDSDEVADKVCEIHFHEINGKMVECKKAQPK 212
Score = 64.5 bits (150), Expect = 6e-11
Identities = 29/79 (36%), Positives = 48/79 (60%)
Frame = +3
Query: 9 RKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMA 188
+K+F+GGLS ++ ++++ +F YG++E + D T R RGF F+ F + + DKV
Sbjct: 134 KKVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKVCE 193
Query: 189 AGEHTINSKKVDPKKAKAR 245
H IN K V+ KKA+ +
Sbjct: 194 IHFHEINGKMVECKKAQPK 212
Score = 62.5 bits (145), Expect = 2e-10
Identities = 30/97 (30%), Positives = 52/97 (53%)
Frame = +3
Query: 195 EHTINSKKVDPKKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRK 374
E +N+ D GK+F+GGLS + + + ++++F FG + E + D + +
Sbjct: 27 EARLNADSDDGSHGSQDPGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRAR 86
Query: 375 GFCFITFESEQVVNELLKTPKQTIGGKEVDVKRATPK 485
GF FITF V+++L + + GK++D K A PK
Sbjct: 87 GFGFITFVDPSSVDKVLNNREHELDGKKIDPKVAFPK 123
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 112 bits (270), Expect = 2e-25
Identities = 56/170 (32%), Positives = 90/170 (52%), Gaps = 11/170 (6%)
Frame = +3
Query: 9 RKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMA 188
RK+FVGGL+ T+D +R+ +S +GEI I V DP T RSRGF F+ F +D M
Sbjct: 23 RKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMK 82
Query: 189 AGEHTINSKKVDPKKAKARHGK-----------IFVGGLSSEISDDEIKNFFSNFGNIIE 335
H I+ K VDPK+A R K ++V G+ + ++D + +F+ +G + +
Sbjct: 83 QRPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTK 142
Query: 336 VEMPFDKTKNQRKGFCFITFESEQVVNELLKTPKQTIGGKEVDVKRATPK 485
E+ DK + +GF F+TF+ V++ + + G DV++ K
Sbjct: 143 SEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSK 192
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 112 bits (270), Expect = 2e-25
Identities = 56/170 (32%), Positives = 90/170 (52%), Gaps = 11/170 (6%)
Frame = +3
Query: 9 RKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMA 188
RK+FVGGL+ T+D +R+ +S +GEI I V DP T RSRGF F+ F +D M
Sbjct: 23 RKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMK 82
Query: 189 AGEHTINSKKVDPKKAKARHGK-----------IFVGGLSSEISDDEIKNFFSNFGNIIE 335
H I+ K VDPK+A R K ++V G+ + ++D + +F+ +G + +
Sbjct: 83 QRPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTK 142
Query: 336 VEMPFDKTKNQRKGFCFITFESEQVVNELLKTPKQTIGGKEVDVKRATPK 485
E+ DK + +GF F+TF+ V++ + + G DV++ K
Sbjct: 143 SEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSK 192
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 112 bits (270), Expect = 2e-25
Identities = 56/170 (32%), Positives = 90/170 (52%), Gaps = 11/170 (6%)
Frame = +3
Query: 9 RKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMA 188
RK+FVGGL+ T+D +R+ +S +GEI I V DP T RSRGF F+ F +D M
Sbjct: 23 RKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMK 82
Query: 189 AGEHTINSKKVDPKKAKARHGK-----------IFVGGLSSEISDDEIKNFFSNFGNIIE 335
H I+ K VDPK+A R K ++V G+ + ++D + +F+ +G + +
Sbjct: 83 QRPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTK 142
Query: 336 VEMPFDKTKNQRKGFCFITFESEQVVNELLKTPKQTIGGKEVDVKRATPK 485
E+ DK + +GF F+TF+ V++ + + G DV++ K
Sbjct: 143 SEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSK 192
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 95.1 bits (226), Expect = 4e-20
Identities = 47/154 (30%), Positives = 78/154 (50%), Gaps = 11/154 (7%)
Frame = +3
Query: 57 LRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMAAGEHTINSKKVDPKKA 236
+R+ +S +GEI I V DP T RSRGF F+ F +D M H I+ K VDPK+A
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRA 60
Query: 237 KARHGK-----------IFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFC 383
R K ++V G+ + ++D + +F+ +G + + E+ DK + +GF
Sbjct: 61 VPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFG 120
Query: 384 FITFESEQVVNELLKTPKQTIGGKEVDVKRATPK 485
F+TF+ V++ + + G DV++ K
Sbjct: 121 FVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSK 154
Score = 52.4 bits (120), Expect = 2e-07
Identities = 21/79 (26%), Positives = 43/79 (54%)
Frame = +3
Query: 9 RKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMA 188
++L+V G+ + ++ L ++F+ YG + + D T + RGF F+ F DS+D+ +
Sbjct: 76 KRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVL 135
Query: 189 AGEHTINSKKVDPKKAKAR 245
H +N + D +K ++
Sbjct: 136 QKSHMVNGHRCDVRKGLSK 154
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 95.1 bits (226), Expect = 4e-20
Identities = 47/154 (30%), Positives = 78/154 (50%), Gaps = 11/154 (7%)
Frame = +3
Query: 57 LRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMAAGEHTINSKKVDPKKA 236
+R+ +S +GEI I V DP T RSRGF F+ F +D M H I+ K VDPK+A
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRA 60
Query: 237 KARHGK-----------IFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFC 383
R K ++V G+ + ++D + +F+ +G + + E+ DK + +GF
Sbjct: 61 VPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFG 120
Query: 384 FITFESEQVVNELLKTPKQTIGGKEVDVKRATPK 485
F+TF+ V++ + + G DV++ K
Sbjct: 121 FVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSK 154
Score = 52.4 bits (120), Expect = 2e-07
Identities = 21/79 (26%), Positives = 43/79 (54%)
Frame = +3
Query: 9 RKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMA 188
++L+V G+ + ++ L ++F+ YG + + D T + RGF F+ F DS+D+ +
Sbjct: 76 KRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVL 135
Query: 189 AGEHTINSKKVDPKKAKAR 245
H +N + D +K ++
Sbjct: 136 QKSHMVNGHRCDVRKGLSK 154
>AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical
protein H28G03.1b protein.
Length = 315
Score = 74.9 bits (176), Expect = 4e-14
Identities = 49/175 (28%), Positives = 89/175 (50%), Gaps = 21/175 (12%)
Frame = +3
Query: 9 RKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMA 188
RKLF+GGLS +T+D++L ++FS +G + V DPNT SRGF F+ F + S + M
Sbjct: 49 RKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMN 108
Query: 189 AGEHTINSKKVDPKKAKARHG------------------KIFVGGLSSEI-SDDEIKNFF 311
H + K VD K+A R K+ + G+++ + S D ++ +F
Sbjct: 109 DRPHKLGGKTVDSKRAIPREQMSSMIPPPFFETDPAPGCKLLLNGITNGVHSVDSLRVYF 168
Query: 312 SNFGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELL--KTPKQTIGGKEVDVK 470
FG + +VE+ Q +G F+ +E ++ + L + + + ++++V+
Sbjct: 169 ETFGTLDQVEI-----LGQPRGLGFVIYEDKESADRCLAHNSGRHIVNERKIEVR 218
Score = 62.1 bits (144), Expect = 3e-10
Identities = 27/78 (34%), Positives = 45/78 (57%)
Frame = +3
Query: 252 KIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLKT 431
K+F+GGLS + +D+++ N+FS +G +++ + D +GF F+TF S +
Sbjct: 50 KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMND 109
Query: 432 PKQTIGGKEVDVKRATPK 485
+GGK VD KRA P+
Sbjct: 110 RPHKLGGKTVDSKRAIPR 127
>AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical
protein H28G03.1c protein.
Length = 335
Score = 74.9 bits (176), Expect = 4e-14
Identities = 49/175 (28%), Positives = 89/175 (50%), Gaps = 21/175 (12%)
Frame = +3
Query: 9 RKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMA 188
RKLF+GGLS +T+D++L ++FS +G + V DPNT SRGF F+ F + S + M
Sbjct: 69 RKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMN 128
Query: 189 AGEHTINSKKVDPKKAKARHG------------------KIFVGGLSSEI-SDDEIKNFF 311
H + K VD K+A R K+ + G+++ + S D ++ +F
Sbjct: 129 DRPHKLGGKTVDSKRAIPREQMSSMIPPPFFETDPAPGCKLLLNGITNGVHSVDSLRVYF 188
Query: 312 SNFGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELL--KTPKQTIGGKEVDVK 470
FG + +VE+ Q +G F+ +E ++ + L + + + ++++V+
Sbjct: 189 ETFGTLDQVEI-----LGQPRGLGFVIYEDKESADRCLAHNSGRHIVNERKIEVR 238
Score = 62.1 bits (144), Expect = 3e-10
Identities = 27/78 (34%), Positives = 45/78 (57%)
Frame = +3
Query: 252 KIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLKT 431
K+F+GGLS + +D+++ N+FS +G +++ + D +GF F+TF S +
Sbjct: 70 KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMND 129
Query: 432 PKQTIGGKEVDVKRATPK 485
+GGK VD KRA P+
Sbjct: 130 RPHKLGGKTVDSKRAIPR 147
>AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical
protein H28G03.1a protein.
Length = 336
Score = 74.9 bits (176), Expect = 4e-14
Identities = 49/175 (28%), Positives = 89/175 (50%), Gaps = 21/175 (12%)
Frame = +3
Query: 9 RKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMA 188
RKLF+GGLS +T+D++L ++FS +G + V DPNT SRGF F+ F + S + M
Sbjct: 70 RKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMN 129
Query: 189 AGEHTINSKKVDPKKAKARHG------------------KIFVGGLSSEI-SDDEIKNFF 311
H + K VD K+A R K+ + G+++ + S D ++ +F
Sbjct: 130 DRPHKLGGKTVDSKRAIPREQMSSMIPPPFFETDPAPGCKLLLNGITNGVHSVDSLRVYF 189
Query: 312 SNFGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELL--KTPKQTIGGKEVDVK 470
FG + +VE+ Q +G F+ +E ++ + L + + + ++++V+
Sbjct: 190 ETFGTLDQVEI-----LGQPRGLGFVIYEDKESADRCLAHNSGRHIVNERKIEVR 239
Score = 62.1 bits (144), Expect = 3e-10
Identities = 27/78 (34%), Positives = 45/78 (57%)
Frame = +3
Query: 252 KIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLKT 431
K+F+GGLS + +D+++ N+FS +G +++ + D +GF F+TF S +
Sbjct: 71 KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMND 130
Query: 432 PKQTIGGKEVDVKRATPK 485
+GGK VD KRA P+
Sbjct: 131 RPHKLGGKTVDSKRAIPR 148
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 71.7 bits (168), Expect = 4e-13
Identities = 50/170 (29%), Positives = 83/170 (48%), Gaps = 9/170 (5%)
Frame = +3
Query: 3 TRRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKV 182
T L+VG L + ++ L + FSA G + SI V D T S G+A++ F+ P ++
Sbjct: 30 TMASLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERA 89
Query: 183 M-AAGEHTINSKKV-------DPKKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIEV 338
M ++ K + DP ++ G IF+ L I + I + FS FGNI+
Sbjct: 90 MDTMNFEALHGKPMRIMWSQRDPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSC 149
Query: 339 EMPFDKTKNQRKGFCFITFESEQVV-NELLKTPKQTIGGKEVDVKRATPK 485
++ D+ KG+ F+ FE+E+ N + K + GK+V V + P+
Sbjct: 150 KVAIDE-DGFSKGYGFVHFETEEAAQNAIQKVNGMLLAGKKVFVGKFQPR 198
Score = 46.0 bits (104), Expect = 2e-05
Identities = 27/72 (37%), Positives = 36/72 (50%)
Frame = +3
Query: 15 LFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMAAG 194
L+V L D L+ F +YG I S V TD N GRS+GF F+ F+ P+ +
Sbjct: 319 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTDEN-GRSKGFGFVCFEKPEEATSAVT-- 375
Query: 195 EHTINSKKVDPK 230
+NSK V K
Sbjct: 376 --EMNSKMVCSK 385
Score = 40.3 bits (90), Expect = 0.001
Identities = 36/139 (25%), Positives = 59/139 (42%), Gaps = 26/139 (18%)
Frame = +3
Query: 69 FSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDK-VMAAGEHTINSKKVD-----PK 230
F+ +G I S V T G+S+GF F+ F P+ + V A + TI + +
Sbjct: 233 FAKFGNITSCEVMTVE--GKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLKLHVCRAQ 290
Query: 231 KAKARHGKI--------------------FVGGLSSEISDDEIKNFFSNFGNIIEVEMPF 350
K RH ++ +V L + DD +K F ++GNI ++
Sbjct: 291 KKSERHAELKKKHEQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMT 350
Query: 351 DKTKNQRKGFCFITFESEQ 407
D+ + KGF F+ FE +
Sbjct: 351 DE-NGRSKGFGFVCFEKPE 368
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 71.7 bits (168), Expect = 4e-13
Identities = 50/170 (29%), Positives = 83/170 (48%), Gaps = 9/170 (5%)
Frame = +3
Query: 3 TRRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKV 182
T L+VG L + ++ L + FSA G + SI V D T S G+A++ F+ P ++
Sbjct: 30 TMASLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERA 89
Query: 183 M-AAGEHTINSKKV-------DPKKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIEV 338
M ++ K + DP ++ G IF+ L I + I + FS FGNI+
Sbjct: 90 MDTMNFEALHGKPMRIMWSQRDPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSC 149
Query: 339 EMPFDKTKNQRKGFCFITFESEQVV-NELLKTPKQTIGGKEVDVKRATPK 485
++ D+ KG+ F+ FE+E+ N + K + GK+V V + P+
Sbjct: 150 KVAIDE-DGFSKGYGFVHFETEEAAQNAIQKVNGMLLAGKKVFVGKFQPR 198
Score = 46.0 bits (104), Expect = 2e-05
Identities = 27/72 (37%), Positives = 36/72 (50%)
Frame = +3
Query: 15 LFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMAAG 194
L+V L D L+ F +YG I S V TD N GRS+GF F+ F+ P+ +
Sbjct: 319 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTDEN-GRSKGFGFVCFEKPEEATSAVT-- 375
Query: 195 EHTINSKKVDPK 230
+NSK V K
Sbjct: 376 --EMNSKMVCSK 385
Score = 40.7 bits (91), Expect = 8e-04
Identities = 41/166 (24%), Positives = 70/166 (42%), Gaps = 27/166 (16%)
Frame = +3
Query: 69 FSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDK-VMAAGEHTINSKKVD-----PK 230
F+ +G I S V T G+S+GF F+ F P+ + V A + TI + +
Sbjct: 233 FAKFGNITSCEVMTVE--GKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLKLHVCRAQ 290
Query: 231 KAKARHGKI--------------------FVGGLSSEISDDEIKNFFSNFGNIIEVEMPF 350
K RH ++ +V L + DD +K F ++GNI ++
Sbjct: 291 KKSERHAELKKKHEQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMT 350
Query: 351 DKTKNQRKGFCFITFES-EQVVNELLKTPKQTIGGKEVDVKRATPK 485
D+ + KGF F+ FE E+ + + + + + K + V A K
Sbjct: 351 DE-NGRSKGFGFVCFEKPEEATSAVTEMNSKMVCSKPLYVAIAQRK 395
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 63.7 bits (148), Expect = 1e-10
Identities = 45/166 (27%), Positives = 79/166 (47%), Gaps = 9/166 (5%)
Frame = +3
Query: 15 LFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVM-AA 191
L++G L + S+ L + FS G + SI V D + S G+A++ F+ P ++ +
Sbjct: 59 LYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQPADAERALDTM 118
Query: 192 GEHTINSKKV-------DPKKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPF 350
I+ + + DP +A +G IF+ L I + + + FS FGNI+ ++
Sbjct: 119 NFEVIHGRPMRIMWSQRDPAARRAGNGNIFIKNLDRVIDNKSVYDTFSLFGNILSCKVAT 178
Query: 351 DKTKNQRKGFCFITFESEQVVNELL-KTPKQTIGGKEVDVKRATPK 485
D N KG+ F+ FE+E + K + K+V V + P+
Sbjct: 179 DDEGNS-KGYGFVHFETEHSAQTAIEKVNGMLLSDKKVYVGKFQPR 223
Score = 51.6 bits (118), Expect = 4e-07
Identities = 28/72 (38%), Positives = 40/72 (55%)
Frame = +3
Query: 15 LFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMAAG 194
L+V + + +D LRDHFS++G I S V D N GRS+GF F+ F+ P+ A
Sbjct: 345 LYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDEN-GRSKGFGFVCFEKPEE----ATAA 399
Query: 195 EHTINSKKVDPK 230
+NSK + K
Sbjct: 400 VTDMNSKMIGAK 411
Score = 51.2 bits (117), Expect = 6e-07
Identities = 38/158 (24%), Positives = 70/158 (44%), Gaps = 14/158 (8%)
Frame = +3
Query: 15 LFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFK----APDSIDKV 182
+F+ L +K + D FS +G I S V TD + G S+G+ F+ F+ A +I+KV
Sbjct: 147 IFIKNLDRVIDNKSVYDTFSLFGNILSCKVATD-DEGNSKGYGFVHFETEHSAQTAIEKV 205
Query: 183 --MAAGEHTINSKKVDPKKAKAR--------HGKIFVGGLSSEISDDEIKNFFSNFGNII 332
M + + K P+ + + + +FV + +++ FS FG I
Sbjct: 206 NGMLLSDKKVYVGKFQPRAQRMKELGESGLKYTNVFVKNFGEHLDQEKLSAMFSKFGEIT 265
Query: 333 EVEMPFDKTKNQRKGFCFITFESEQVVNELLKTPKQTI 446
+ D + + KGF F+ F + + ++ +I
Sbjct: 266 SAVVMTD-AQGKPKGFGFVAFADQDAAGQAVEKLNDSI 302
Score = 46.0 bits (104), Expect = 2e-05
Identities = 43/184 (23%), Positives = 78/184 (42%), Gaps = 27/184 (14%)
Frame = +3
Query: 15 LFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSI------- 173
+FV ++L FS +GEI S V TD G+ +GF F+ F D+
Sbjct: 240 VFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQ-GKPKGFGFVAFADQDAAGQAVEKL 298
Query: 174 -DKVMAAGEHTINSKKVDPKKAKARHGK------------------IFVGGLSSEISDDE 296
D ++ + ++ + K ++ K ++V + +++DD
Sbjct: 299 NDSILEGTDCKLSVCRAQKKSERSAELKRKYEALKQERVQRYQGVNLYVKNIEEDLNDDG 358
Query: 297 IKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFES-EQVVNELLKTPKQTIGGKEVDVKR 473
+++ FS+FG I ++ D+ + KGF F+ FE E+ + + IG K + V
Sbjct: 359 LRDHFSSFGTITSAKVMVDE-NGRSKGFGFVCFEKPEEATAAVTDMNSKMIGAKPLYVAL 417
Query: 474 ATPK 485
A K
Sbjct: 418 AQRK 421
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 63.7 bits (148), Expect = 1e-10
Identities = 45/166 (27%), Positives = 79/166 (47%), Gaps = 9/166 (5%)
Frame = +3
Query: 15 LFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVM-AA 191
L++G L + S+ L + FS G + SI V D + S G+A++ F+ P ++ +
Sbjct: 59 LYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQPADAERALDTM 118
Query: 192 GEHTINSKKV-------DPKKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPF 350
I+ + + DP +A +G IF+ L I + + + FS FGNI+ ++
Sbjct: 119 NFEVIHGRPMRIMWSQRDPAARRAGNGNIFIKNLDRVIDNKSVYDTFSLFGNILSCKVAT 178
Query: 351 DKTKNQRKGFCFITFESEQVVNELL-KTPKQTIGGKEVDVKRATPK 485
D N KG+ F+ FE+E + K + K+V V + P+
Sbjct: 179 DDEGNS-KGYGFVHFETEHSAQTAIEKVNGMLLSDKKVYVGKFQPR 223
Score = 51.6 bits (118), Expect = 4e-07
Identities = 28/72 (38%), Positives = 40/72 (55%)
Frame = +3
Query: 15 LFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMAAG 194
L+V + + +D LRDHFS++G I S V D N GRS+GF F+ F+ P+ A
Sbjct: 345 LYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDEN-GRSKGFGFVCFEKPEE----ATAA 399
Query: 195 EHTINSKKVDPK 230
+NSK + K
Sbjct: 400 VTDMNSKMIGAK 411
Score = 51.2 bits (117), Expect = 6e-07
Identities = 38/158 (24%), Positives = 70/158 (44%), Gaps = 14/158 (8%)
Frame = +3
Query: 15 LFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFK----APDSIDKV 182
+F+ L +K + D FS +G I S V TD + G S+G+ F+ F+ A +I+KV
Sbjct: 147 IFIKNLDRVIDNKSVYDTFSLFGNILSCKVATD-DEGNSKGYGFVHFETEHSAQTAIEKV 205
Query: 183 --MAAGEHTINSKKVDPKKAKAR--------HGKIFVGGLSSEISDDEIKNFFSNFGNII 332
M + + K P+ + + + +FV + +++ FS FG I
Sbjct: 206 NGMLLSDKKVYVGKFQPRAQRMKELGESGLKYTNVFVKNFGEHLDQEKLSAMFSKFGEIT 265
Query: 333 EVEMPFDKTKNQRKGFCFITFESEQVVNELLKTPKQTI 446
+ D + + KGF F+ F + + ++ +I
Sbjct: 266 SAVVMTD-AQGKPKGFGFVAFADQDAAGQAVEKLNDSI 302
Score = 46.0 bits (104), Expect = 2e-05
Identities = 43/184 (23%), Positives = 78/184 (42%), Gaps = 27/184 (14%)
Frame = +3
Query: 15 LFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSI------- 173
+FV ++L FS +GEI S V TD G+ +GF F+ F D+
Sbjct: 240 VFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQ-GKPKGFGFVAFADQDAAGQAVEKL 298
Query: 174 -DKVMAAGEHTINSKKVDPKKAKARHGK------------------IFVGGLSSEISDDE 296
D ++ + ++ + K ++ K ++V + +++DD
Sbjct: 299 NDSILEGTDCKLSVCRAQKKSERSAELKRKYEALKQERVQRYQGVNLYVKNIEEDLNDDG 358
Query: 297 IKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFES-EQVVNELLKTPKQTIGGKEVDVKR 473
+++ FS+FG I ++ D+ + KGF F+ FE E+ + + IG K + V
Sbjct: 359 LRDHFSSFGTITSAKVMVDE-NGRSKGFGFVCFEKPEEATAAVTDMNSKMIGAKPLYVAL 417
Query: 474 ATPK 485
A K
Sbjct: 418 AQRK 421
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 62.5 bits (145), Expect = 2e-10
Identities = 39/137 (28%), Positives = 69/137 (50%), Gaps = 9/137 (6%)
Frame = +3
Query: 12 KLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVF-KAPDSID---- 176
K+FVG + + ++ + R F YG + S N+ D +T S+G F+ F D+I+
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGA 115
Query: 177 ----KVMAAGEHTINSKKVDPKKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEM 344
KV+ H + K D + R K+F+G LS + +++ ++ F+ FG+I + +
Sbjct: 116 LHNIKVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEENLREIFAKFGHIEDCSV 173
Query: 345 PFDKTKNQRKGFCFITF 395
D+ R G F+TF
Sbjct: 174 LRDQDGKSR-GCAFVTF 189
Score = 45.6 bits (103), Expect = 3e-05
Identities = 22/49 (44%), Positives = 34/49 (69%)
Frame = +3
Query: 9 RKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVF 155
RKLF+G LS + +++ LR+ F+ +G IE +V D + G+SRG AF+ F
Sbjct: 142 RKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQD-GKSRGCAFVTF 189
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 62.5 bits (145), Expect = 2e-10
Identities = 39/137 (28%), Positives = 69/137 (50%), Gaps = 9/137 (6%)
Frame = +3
Query: 12 KLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVF-KAPDSID---- 176
K+FVG + + ++ + R F YG + S N+ D +T S+G F+ F D+I+
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGA 115
Query: 177 ----KVMAAGEHTINSKKVDPKKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEM 344
KV+ H + K D + R K+F+G LS + +++ ++ F+ FG+I + +
Sbjct: 116 LHNIKVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEENLREIFAKFGHIEDCSV 173
Query: 345 PFDKTKNQRKGFCFITF 395
D+ R G F+TF
Sbjct: 174 LRDQDGKSR-GCAFVTF 189
Score = 45.6 bits (103), Expect = 3e-05
Identities = 22/49 (44%), Positives = 34/49 (69%)
Frame = +3
Query: 9 RKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVF 155
RKLF+G LS + +++ LR+ F+ +G IE +V D + G+SRG AF+ F
Sbjct: 142 RKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQD-GKSRGCAFVTF 189
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 62.5 bits (145), Expect = 2e-10
Identities = 39/137 (28%), Positives = 69/137 (50%), Gaps = 9/137 (6%)
Frame = +3
Query: 12 KLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVF-KAPDSID---- 176
K+FVG + + ++ + R F YG + S N+ D +T S+G F+ F D+I+
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGA 115
Query: 177 ----KVMAAGEHTINSKKVDPKKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEM 344
KV+ H + K D + R K+F+G LS + +++ ++ F+ FG+I + +
Sbjct: 116 LHNIKVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEENLREIFAKFGHIEDCSV 173
Query: 345 PFDKTKNQRKGFCFITF 395
D+ R G F+TF
Sbjct: 174 LRDQDGKSR-GCAFVTF 189
Score = 45.6 bits (103), Expect = 3e-05
Identities = 22/49 (44%), Positives = 34/49 (69%)
Frame = +3
Query: 9 RKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVF 155
RKLF+G LS + +++ LR+ F+ +G IE +V D + G+SRG AF+ F
Sbjct: 142 RKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQD-GKSRGCAFVTF 189
>EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA
binding protein variantD protein.
Length = 327
Score = 62.5 bits (145), Expect = 2e-10
Identities = 39/137 (28%), Positives = 69/137 (50%), Gaps = 9/137 (6%)
Frame = +3
Query: 12 KLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVF-KAPDSID---- 176
K+FVG + + ++ + R F YG + S N+ D +T S+G F+ F D+I+
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGA 115
Query: 177 ----KVMAAGEHTINSKKVDPKKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEM 344
KV+ H + K D + R K+F+G LS + +++ ++ F+ FG+I + +
Sbjct: 116 LHNIKVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEENLREIFAKFGHIEDCSV 173
Query: 345 PFDKTKNQRKGFCFITF 395
D+ R G F+TF
Sbjct: 174 LRDQDGKSR-GCAFVTF 189
Score = 45.6 bits (103), Expect = 3e-05
Identities = 22/49 (44%), Positives = 34/49 (69%)
Frame = +3
Query: 9 RKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVF 155
RKLF+G LS + +++ LR+ F+ +G IE +V D + G+SRG AF+ F
Sbjct: 142 RKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQD-GKSRGCAFVTF 189
>EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA
binding protein variantC protein.
Length = 378
Score = 62.5 bits (145), Expect = 2e-10
Identities = 39/137 (28%), Positives = 69/137 (50%), Gaps = 9/137 (6%)
Frame = +3
Query: 12 KLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVF-KAPDSID---- 176
K+FVG + + ++ + R F YG + S N+ D +T S+G F+ F D+I+
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGA 115
Query: 177 ----KVMAAGEHTINSKKVDPKKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEM 344
KV+ H + K D + R K+F+G LS + +++ ++ F+ FG+I + +
Sbjct: 116 LHNIKVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEENLREIFAKFGHIEDCSV 173
Query: 345 PFDKTKNQRKGFCFITF 395
D+ R G F+TF
Sbjct: 174 LRDQDGKSR-GCAFVTF 189
Score = 45.6 bits (103), Expect = 3e-05
Identities = 22/49 (44%), Positives = 34/49 (69%)
Frame = +3
Query: 9 RKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVF 155
RKLF+G LS + +++ LR+ F+ +G IE +V D + G+SRG AF+ F
Sbjct: 142 RKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQD-GKSRGCAFVTF 189
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 62.5 bits (145), Expect = 2e-10
Identities = 39/137 (28%), Positives = 69/137 (50%), Gaps = 9/137 (6%)
Frame = +3
Query: 12 KLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVF-KAPDSID---- 176
K+FVG + + ++ + R F YG + S N+ D +T S+G F+ F D+I+
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGA 115
Query: 177 ----KVMAAGEHTINSKKVDPKKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEM 344
KV+ H + K D + R K+F+G LS + +++ ++ F+ FG+I + +
Sbjct: 116 LHNIKVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEENLREIFAKFGHIEDCSV 173
Query: 345 PFDKTKNQRKGFCFITF 395
D+ R G F+TF
Sbjct: 174 LRDQDGKSR-GCAFVTF 189
Score = 45.6 bits (103), Expect = 3e-05
Identities = 22/49 (44%), Positives = 34/49 (69%)
Frame = +3
Query: 9 RKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVF 155
RKLF+G LS + +++ LR+ F+ +G IE +V D + G+SRG AF+ F
Sbjct: 142 RKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQD-GKSRGCAFVTF 189
>Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical
protein F44G4.4a protein.
Length = 411
Score = 61.3 bits (142), Expect = 5e-10
Identities = 40/166 (24%), Positives = 78/166 (46%), Gaps = 9/166 (5%)
Frame = +3
Query: 15 LFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMAAG 194
L V G+ ++T+D+ + +F G + +K + G S+GF F+ + +KV+A
Sbjct: 175 LIVLGVDFKTTDECFQKYFEDIGTVVFCEIKRKSD-GNSKGFGFVRMSSVGEQNKVLAIP 233
Query: 195 EHTINSKKVDPKKAKARH-------GKIFVGGLSSEISDDEIKNFFSNFG-NIIEVEMPF 350
+H I+ ++ D K R +IFVG L+ ++ + +++ F + + IE +
Sbjct: 234 QHMIDGRRCDVKVPDGRDKQGRPSISRIFVGRLTDKVDEHQLRKVFGDEAKSYIETAVVT 293
Query: 351 DK-TKNQRKGFCFITFESEQVVNELLKTPKQTIGGKEVDVKRATPK 485
D +GF F+T S + ++ T+ G V + A P+
Sbjct: 294 DVFIPKPFRGFAFVTLSSAEAAERIVSKGSLTVNGLSVGLSIAQPR 339
>AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor
protein 12 protein.
Length = 248
Score = 60.5 bits (140), Expect = 9e-10
Identities = 28/71 (39%), Positives = 42/71 (59%)
Frame = +3
Query: 12 KLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMAA 191
K+FVGGL + TSDK L ++F +G+IE V TD NT +SRG+ F+ K S ++
Sbjct: 36 KIFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTMKDRASAERACKD 95
Query: 192 GEHTINSKKVD 224
I+ +K +
Sbjct: 96 PNPIIDGRKAN 106
Score = 50.4 bits (115), Expect = 1e-06
Identities = 24/75 (32%), Positives = 37/75 (49%)
Frame = +3
Query: 252 KIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLKT 431
KIFVGGL SD + +F FG+I E + D+ + +G+ F+T + K
Sbjct: 36 KIFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTMKDRASAERACKD 95
Query: 432 PKQTIGGKEVDVKRA 476
P I G++ +V A
Sbjct: 96 PNPIIDGRKANVNLA 110
>Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical
protein C50B8.1 protein.
Length = 114
Score = 60.1 bits (139), Expect = 1e-09
Identities = 26/74 (35%), Positives = 42/74 (56%)
Frame = +3
Query: 3 TRRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKV 182
T + +++ + W T +L +F YG I+S+N+ DP+TG RGFA I F + D +K
Sbjct: 23 TGQTVYLTHVKWVTGKSQLEHYFKRYGSIQSVNMFYDPDTGLHRGFASITFDSKDGANKA 82
Query: 183 MAAGEHTINSKKVD 224
+ H I+ +VD
Sbjct: 83 IEQRPHVIDGDRVD 96
Score = 44.4 bits (100), Expect = 7e-05
Identities = 23/94 (24%), Positives = 44/94 (46%)
Frame = +3
Query: 201 TINSKKVDPKKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGF 380
T N K+ + K +++ + +++++F +G+I V M +D +GF
Sbjct: 9 TTNISKLIEARPKNTGQTVYLTHVKWVTGKSQLEHYFKRYGSIQSVNMFYDPDTGLHRGF 68
Query: 381 CFITFESEQVVNELLKTPKQTIGGKEVDVKRATP 482
ITF+S+ N+ ++ I G VDV+ P
Sbjct: 69 ASITFDSKDGANKAIEQRPHVIDGDRVDVEPYIP 102
>AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform a protein.
Length = 339
Score = 58.4 bits (135), Expect = 4e-09
Identities = 45/184 (24%), Positives = 90/184 (48%), Gaps = 27/184 (14%)
Frame = +3
Query: 12 KLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAP-------DS 170
+++VG +S+E + LR F +G I+SIN+ DP TG + FAF+ ++ P +S
Sbjct: 103 RIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQES 162
Query: 171 IDKVMAAGEH-TINS------------KKVDP-----KKAKARHGKIFVGGLSSEISDDE 296
++ M G + +NS + P +K ++ +++V + ++S+ +
Sbjct: 163 MNGQMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKKYFRVYVSSVHPDLSETD 222
Query: 297 IKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLKTPKQ-TIGGKEVDV-K 470
+K+ F FG I++ ++ T +GF ++ F + +E + +GG+ + V K
Sbjct: 223 LKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAGMNMFDLGGQYLRVGK 282
Query: 471 RATP 482
TP
Sbjct: 283 CVTP 286
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 58.4 bits (135), Expect = 4e-09
Identities = 45/184 (24%), Positives = 90/184 (48%), Gaps = 27/184 (14%)
Frame = +3
Query: 12 KLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAP-------DS 170
+++VG +S+E + LR F +G I+SIN+ DP TG + FAF+ ++ P +S
Sbjct: 103 RIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQES 162
Query: 171 IDKVMAAGEH-TINS------------KKVDP-----KKAKARHGKIFVGGLSSEISDDE 296
++ M G + +NS + P +K ++ +++V + ++S+ +
Sbjct: 163 MNGQMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKKYFRVYVSSVHPDLSETD 222
Query: 297 IKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLKTPKQ-TIGGKEVDV-K 470
+K+ F FG I++ ++ T +GF ++ F + +E + +GG+ + V K
Sbjct: 223 LKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAGMNMFDLGGQYLRVGK 282
Query: 471 RATP 482
TP
Sbjct: 283 CVTP 286
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 58.0 bits (134), Expect = 5e-09
Identities = 41/146 (28%), Positives = 66/146 (45%), Gaps = 8/146 (5%)
Frame = +3
Query: 15 LFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSID-KVMAA 191
++VGGL + S+ L + G + S+N+ D T +GF F+ F + D +
Sbjct: 15 IYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKIL 74
Query: 192 GEHTINSKKVDPKKAKARH------GKIFVGGLSSEISDDEIKNFFSNFGNIIEV-EMPF 350
+ K + KA A IFVG L E+ + + + FS FG I++V ++
Sbjct: 75 NMIKLYGKPIKVNKASAHEKNMDVGANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMR 134
Query: 351 DKTKNQRKGFCFITFESEQVVNELLK 428
D KGF FI F S + + L+
Sbjct: 135 DVDSGTSKGFAFINFASFEASDTALE 160
Score = 44.8 bits (101), Expect = 5e-05
Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Frame = +3
Query: 15 LFVGGLSWETSDKELRDHFSAYGEIESI-NVKTDPNTGRSRGFAFIVFKAPDSIDKVMAA 191
+FVG L E +K L D FSA+G I + + D ++G S+GFAFI F + ++ D + A
Sbjct: 102 IFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTALEA 161
Score = 41.9 bits (94), Expect = 4e-04
Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Frame = +3
Query: 255 IFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLKTP 434
I+VGGL ++S+ + G ++ V MP D+ +GF F+ F E+ + +K
Sbjct: 15 IYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKIL 74
Query: 435 KQ-TIGGKEVDVKRAT 479
+ GK + V +A+
Sbjct: 75 NMIKLYGKPIKVNKAS 90
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 58.0 bits (134), Expect = 5e-09
Identities = 35/149 (23%), Positives = 71/149 (47%), Gaps = 6/149 (4%)
Frame = +3
Query: 3 TRRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVF-KAPDSIDK 179
++ L + L + +E+R F++ GEIES + D TG+S G+ F+ + + D++
Sbjct: 40 SKTNLIINYLPQGMTQEEVRSLFTSIGEIESCKLVRDKVTGQSLGYGFVNYVREEDALRA 99
Query: 180 VMAAGEHTINSKKVD-----PKKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEM 344
V + + +K + P + + ++V G+ ++ E+++ F FG II +
Sbjct: 100 VSSFNGLRLQNKTIKVSYARPSNDQIKGSNLYVSGIPKSMTLHELESIFRPFGQIITSRI 159
Query: 345 PFDKTKNQRKGFCFITFESEQVVNELLKT 431
D KG F+ F+ + + +KT
Sbjct: 160 LSDNVTGLSKGVGFVRFDKKDEADVAIKT 188
Score = 40.7 bits (91), Expect = 8e-04
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Frame = +3
Query: 255 IFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFES-EQVVNELLKT 431
+FV LSS+ D + FS FG I+ V++ D T+ Q KG+ F++ + + N +L
Sbjct: 376 LFVYNLSSDTDDTLLWQLFSQFGAIVNVKILRDLTQ-QCKGYAFVSMSNYTEAYNAMLSL 434
Query: 432 PKQTIGGKEVDV--KRATP 482
+ GK + V K +TP
Sbjct: 435 NGTNLAGKTLQVVFKSSTP 453
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 58.0 bits (134), Expect = 5e-09
Identities = 41/146 (28%), Positives = 66/146 (45%), Gaps = 8/146 (5%)
Frame = +3
Query: 15 LFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSID-KVMAA 191
++VGGL + S+ L + G + S+N+ D T +GF F+ F + D +
Sbjct: 25 IYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKIL 84
Query: 192 GEHTINSKKVDPKKAKARH------GKIFVGGLSSEISDDEIKNFFSNFGNIIEV-EMPF 350
+ K + KA A IFVG L E+ + + + FS FG I++V ++
Sbjct: 85 NMIKLYGKPIKVNKASAHEKNMDVGANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMR 144
Query: 351 DKTKNQRKGFCFITFESEQVVNELLK 428
D KGF FI F S + + L+
Sbjct: 145 DVDSGTSKGFAFINFASFEASDTALE 170
Score = 44.8 bits (101), Expect = 5e-05
Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Frame = +3
Query: 15 LFVGGLSWETSDKELRDHFSAYGEIESI-NVKTDPNTGRSRGFAFIVFKAPDSIDKVMAA 191
+FVG L E +K L D FSA+G I + + D ++G S+GFAFI F + ++ D + A
Sbjct: 112 IFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTALEA 171
Score = 41.9 bits (94), Expect = 4e-04
Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Frame = +3
Query: 255 IFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLKTP 434
I+VGGL ++S+ + G ++ V MP D+ +GF F+ F E+ + +K
Sbjct: 25 IYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKIL 84
Query: 435 KQ-TIGGKEVDVKRAT 479
+ GK + V +A+
Sbjct: 85 NMIKLYGKPIKVNKAS 100
>AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform c protein.
Length = 346
Score = 58.0 bits (134), Expect = 5e-09
Identities = 38/155 (24%), Positives = 78/155 (50%), Gaps = 25/155 (16%)
Frame = +3
Query: 12 KLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAP-------DS 170
+++VG +S+E + LR F +G I+SIN+ DP TG + FAF+ ++ P +S
Sbjct: 103 RIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQES 162
Query: 171 IDKVMAAGEH-TINS------------KKVDP-----KKAKARHGKIFVGGLSSEISDDE 296
++ M G + +NS + P +K ++ +++V + ++S+ +
Sbjct: 163 MNGQMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKKYFRVYVSSVHPDLSETD 222
Query: 297 IKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFES 401
+K+ F FG I++ ++ T +GF ++ F +
Sbjct: 223 LKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNN 257
Score = 31.1 bits (67), Expect = 0.66
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +3
Query: 12 KLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRS-RGFAFIVFKAPDSIDKVMA 188
+++V + + S+ +L+ F A+GEI + P TGR RGF ++ F S + +A
Sbjct: 208 RVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAP-TGRGHRGFGYLEFNNLTSQSEAIA 266
>EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA
binding protein variantB protein.
Length = 193
Score = 57.2 bits (132), Expect = 9e-09
Identities = 35/129 (27%), Positives = 64/129 (49%), Gaps = 9/129 (6%)
Frame = +3
Query: 12 KLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVF-KAPDSID---- 176
K+FVG + + ++ + R F YG + S N+ D +T S+G F+ F D+I+
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGA 115
Query: 177 ----KVMAAGEHTINSKKVDPKKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEM 344
KV+ H + K D + R K+F+G LS + +++ ++ F+ FG+I + +
Sbjct: 116 LHNIKVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEENLREIFAKFGHIEDCSV 173
Query: 345 PFDKTKNQR 371
D+ R
Sbjct: 174 LRDQDGKSR 182
Score = 38.7 bits (86), Expect = 0.003
Identities = 19/43 (44%), Positives = 30/43 (69%)
Frame = +3
Query: 9 RKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRG 137
RKLF+G LS + +++ LR+ F+ +G IE +V D + G+SRG
Sbjct: 142 RKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQD-GKSRG 183
Score = 37.9 bits (84), Expect = 0.006
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +3
Query: 252 KIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITF 395
K+FVG + + ++ + + F +G++ + DK+ KG CF+TF
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTF 103
>Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical
protein C17D12.2 protein.
Length = 514
Score = 55.6 bits (128), Expect = 3e-08
Identities = 40/145 (27%), Positives = 66/145 (45%), Gaps = 16/145 (11%)
Frame = +3
Query: 12 KLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDS------- 170
KLFVG + +K+LR F +G+I + D TG +G AF+ + DS
Sbjct: 30 KLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRDSAVRCQAT 89
Query: 171 ---------IDKVMAAGEHTINSKKVDPKKAKARHGKIFVGGLSSEISDDEIKNFFSNFG 323
+++ M +S+ PK K K+F+G LS + S+DE++ F+ FG
Sbjct: 90 LHDQKTLPGMNRAMQVKPADTDSRPASPKD-KMDDKKLFIGMLSKQQSEDEVRALFATFG 148
Query: 324 NIIEVEMPFDKTKNQRKGFCFITFE 398
+ EV + KG F+ ++
Sbjct: 149 ELDEVTV-LRGADGASKGCAFVKYK 172
Score = 40.7 bits (91), Expect = 8e-04
Identities = 19/50 (38%), Positives = 33/50 (66%)
Frame = +3
Query: 9 RKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFK 158
+KLF+G LS + S+ E+R F+ +GE++ + V + G S+G AF+ +K
Sbjct: 124 KKLFIGMLSKQQSEDEVRALFATFGELDEVTVLRGAD-GASKGCAFVKYK 172
>AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative
RNA-binding protein protein.
Length = 514
Score = 55.6 bits (128), Expect = 3e-08
Identities = 40/145 (27%), Positives = 66/145 (45%), Gaps = 16/145 (11%)
Frame = +3
Query: 12 KLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDS------- 170
KLFVG + +K+LR F +G+I + D TG +G AF+ + DS
Sbjct: 30 KLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRDSAVRCQAT 89
Query: 171 ---------IDKVMAAGEHTINSKKVDPKKAKARHGKIFVGGLSSEISDDEIKNFFSNFG 323
+++ M +S+ PK K K+F+G LS + S+DE++ F+ FG
Sbjct: 90 LHDQKTLPGMNRAMQVKPADTDSRPASPKD-KMDDKKLFIGMLSKQQSEDEVRALFATFG 148
Query: 324 NIIEVEMPFDKTKNQRKGFCFITFE 398
+ EV + KG F+ ++
Sbjct: 149 ELDEVTV-LRGADGASKGCAFVKYK 172
Score = 40.7 bits (91), Expect = 8e-04
Identities = 19/50 (38%), Positives = 33/50 (66%)
Frame = +3
Query: 9 RKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFK 158
+KLF+G LS + S+ E+R F+ +GE++ + V + G S+G AF+ +K
Sbjct: 124 KKLFIGMLSKQQSEDEVRALFATFGELDEVTVLRGAD-GASKGCAFVKYK 172
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 55.2 bits (127), Expect = 4e-08
Identities = 40/161 (24%), Positives = 77/161 (47%), Gaps = 7/161 (4%)
Frame = +3
Query: 15 LFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMAAG 194
+++GGLS+ S+ ++ FS YGE+ +IN+ D +TG+S+GFAF+ +K D ++A
Sbjct: 40 IYIGGLSYALSEGDVIAVFSQYGEVMNINLIRDKDTGKSKGFAFLCYK--DQRSTILAV- 96
Query: 195 EHTINSKKVDPKKAKARHGKIFVGGLSSEISDDEIKNFFSN-------FGNIIEVEMPFD 353
N + + + H + + E +DDE K + +E+
Sbjct: 97 -DNFNGISLHKRMIRVDHVEEYKVPKYKEDADDETKRLWEEGCAPKPVMREAAPMEVQEQ 155
Query: 354 KTKNQRKGFCFITFESEQVVNELLKTPKQTIGGKEVDVKRA 476
+ K ++ I E+++ ++ K K+ K+ + KRA
Sbjct: 156 RIKKAKEVLLDIGDVDEELLKKIKKDKKKAKKEKKREKKRA 196
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 54.8 bits (126), Expect = 5e-08
Identities = 34/142 (23%), Positives = 65/142 (45%), Gaps = 5/142 (3%)
Frame = +3
Query: 12 KLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVF-KAPDSIDKVMA 188
+++VG + + + L F G+I + + DP +G SRG+AF+ + D+
Sbjct: 201 EIYVGHIPTDVFEDTLVPLFEKSGKIWDLRLMMDPMSGASRGYAFVTYCNKEDAAAAAKT 260
Query: 189 AGEHTINSKKVDPKKAKARHGKIFVGGLSSEISDDEI----KNFFSNFGNIIEVEMPFDK 356
H I++ K + ++F+G + S DEI K ++I +P D
Sbjct: 261 YDGHEISTGKPLKVNVSIANTRLFIGNIPKTKSKDEILEELKTHAEGVVDVIVYSVP-DN 319
Query: 357 TKNQRKGFCFITFESEQVVNEL 422
K + +GFCF+ F + +++
Sbjct: 320 EKIKNRGFCFVDFIDHKTASDI 341
>AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical
protein F29C4.7b protein.
Length = 423
Score = 54.8 bits (126), Expect = 5e-08
Identities = 32/117 (27%), Positives = 58/117 (49%), Gaps = 6/117 (5%)
Frame = +3
Query: 9 RKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMA 188
R LFVG + + ++E+R F +G++E +++KT NT +AF++F+ D + A
Sbjct: 169 RTLFVGNMPSDVKEREIRHVFEEHGKVEEVDIKTPINT--DAAYAFVMFQTVD--QAIQA 224
Query: 189 AGEHTINSKKVDPKKAKARHGK------IFVGGLSSEISDDEIKNFFSNFGNIIEVE 341
E + + K +GK +FVGGL S + ++ F FG + ++
Sbjct: 225 KAEEQDRPIRAGGSRMKIGYGKSQVSRRLFVGGLGSWCDKEILQKAFGEFGFVENID 281
>AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical
protein F29C4.7a protein.
Length = 520
Score = 54.8 bits (126), Expect = 5e-08
Identities = 32/117 (27%), Positives = 58/117 (49%), Gaps = 6/117 (5%)
Frame = +3
Query: 9 RKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMA 188
R LFVG + + ++E+R F +G++E +++KT NT +AF++F+ D + A
Sbjct: 169 RTLFVGNMPSDVKEREIRHVFEEHGKVEEVDIKTPINT--DAAYAFVMFQTVD--QAIQA 224
Query: 189 AGEHTINSKKVDPKKAKARHGK------IFVGGLSSEISDDEIKNFFSNFGNIIEVE 341
E + + K +GK +FVGGL S + ++ F FG + ++
Sbjct: 225 KAEEQDRPIRAGGSRMKIGYGKSQVSRRLFVGGLGSWCDKEILQKAFGEFGFVENID 281
>AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical
protein F29C4.7c protein.
Length = 497
Score = 54.8 bits (126), Expect = 5e-08
Identities = 32/117 (27%), Positives = 58/117 (49%), Gaps = 6/117 (5%)
Frame = +3
Query: 9 RKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMA 188
R LFVG + + ++E+R F +G++E +++KT NT +AF++F+ D + A
Sbjct: 146 RTLFVGNMPSDVKEREIRHVFEEHGKVEEVDIKTPINT--DAAYAFVMFQTVD--QAIQA 201
Query: 189 AGEHTINSKKVDPKKAKARHGK------IFVGGLSSEISDDEIKNFFSNFGNIIEVE 341
E + + K +GK +FVGGL S + ++ F FG + ++
Sbjct: 202 KAEEQDRPIRAGGSRMKIGYGKSQVSRRLFVGGLGSWCDKEILQKAFGEFGFVENID 258
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 54.0 bits (124), Expect = 8e-08
Identities = 42/176 (23%), Positives = 84/176 (47%), Gaps = 27/176 (15%)
Frame = +3
Query: 15 LFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMA-- 188
+FVG LS E +++LR+ F +G++ V D NT +S+G+ F+ + + ++ +
Sbjct: 24 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 83
Query: 189 ----AGEHTI------------------NSKKVDP--KKAKARHGKIFVGGLSSEISDDE 296
G TI N K D + + ++VG ++S +++DE
Sbjct: 84 NGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIAS-LTEDE 142
Query: 297 IKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFES-EQVVNELLKTPKQTIGGKEV 461
I+ F++FG I EV + + +G+ F+ F++ + +++ Q +GG+ V
Sbjct: 143 IRQGFASFGRITEVRI------FKMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQLV 192
Score = 45.6 bits (103), Expect = 3e-05
Identities = 22/82 (26%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Frame = +3
Query: 243 RHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITF-ESEQVVNE 419
RH +FVG LSSE+ + +++ F FG++ + ++ D + KG+ F+++ + E+
Sbjct: 20 RHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERA 79
Query: 420 LLKTPKQTIGGKEVDVKRATPK 485
+ + Q +G + + AT K
Sbjct: 80 IEQMNGQWLGRRTIRTNWATRK 101
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 54.0 bits (124), Expect = 8e-08
Identities = 42/176 (23%), Positives = 84/176 (47%), Gaps = 27/176 (15%)
Frame = +3
Query: 15 LFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMA-- 188
+FVG LS E +++LR+ F +G++ V D NT +S+G+ F+ + + ++ +
Sbjct: 34 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 93
Query: 189 ----AGEHTI------------------NSKKVDP--KKAKARHGKIFVGGLSSEISDDE 296
G TI N K D + + ++VG ++S +++DE
Sbjct: 94 NGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIAS-LTEDE 152
Query: 297 IKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFES-EQVVNELLKTPKQTIGGKEV 461
I+ F++FG I EV + + +G+ F+ F++ + +++ Q +GG+ V
Sbjct: 153 IRQGFASFGRITEVRI------FKMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQLV 202
Score = 45.6 bits (103), Expect = 3e-05
Identities = 22/82 (26%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Frame = +3
Query: 243 RHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITF-ESEQVVNE 419
RH +FVG LSSE+ + +++ F FG++ + ++ D + KG+ F+++ + E+
Sbjct: 30 RHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERA 89
Query: 420 LLKTPKQTIGGKEVDVKRATPK 485
+ + Q +G + + AT K
Sbjct: 90 IEQMNGQWLGRRTIRTNWATRK 111
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 54.0 bits (124), Expect = 8e-08
Identities = 42/176 (23%), Positives = 84/176 (47%), Gaps = 27/176 (15%)
Frame = +3
Query: 15 LFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMA-- 188
+FVG LS E +++LR+ F +G++ V D NT +S+G+ F+ + + ++ +
Sbjct: 137 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 196
Query: 189 ----AGEHTI------------------NSKKVDP--KKAKARHGKIFVGGLSSEISDDE 296
G TI N K D + + ++VG ++S +++DE
Sbjct: 197 NGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIAS-LTEDE 255
Query: 297 IKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFES-EQVVNELLKTPKQTIGGKEV 461
I+ F++FG I EV + + +G+ F+ F++ + +++ Q +GG+ V
Sbjct: 256 IRQGFASFGRITEVRI------FKMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQLV 305
Score = 48.8 bits (111), Expect = 3e-06
Identities = 39/172 (22%), Positives = 81/172 (47%), Gaps = 13/172 (7%)
Frame = +3
Query: 9 RKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVF-------KAPD 167
R L+VG L ++ + F+ G + V D G + +AF+ F +A
Sbjct: 46 RTLYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFD---GSNDPYAFVEFSDHGQASQALQ 102
Query: 168 SIDKVMAAGEHTINSKKVDPKKAKA-----RHGKIFVGGLSSEISDDEIKNFFSNFGNII 332
+++K + + V+P + ++ RH +FVG LSSE+ + +++ F FG++
Sbjct: 103 TMNKRLLLDREMKVNWAVEPGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVS 162
Query: 333 EVEMPFDKTKNQRKGFCFITF-ESEQVVNELLKTPKQTIGGKEVDVKRATPK 485
+ ++ D + KG+ F+++ + E+ + + Q +G + + AT K
Sbjct: 163 DAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRK 214
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 54.0 bits (124), Expect = 8e-08
Identities = 42/176 (23%), Positives = 84/176 (47%), Gaps = 27/176 (15%)
Frame = +3
Query: 15 LFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMA-- 188
+FVG LS E +++LR+ F +G++ V D NT +S+G+ F+ + + ++ +
Sbjct: 105 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 164
Query: 189 ----AGEHTI------------------NSKKVDP--KKAKARHGKIFVGGLSSEISDDE 296
G TI N K D + + ++VG ++S +++DE
Sbjct: 165 NGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIAS-LTEDE 223
Query: 297 IKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFES-EQVVNELLKTPKQTIGGKEV 461
I+ F++FG I EV + + +G+ F+ F++ + +++ Q +GG+ V
Sbjct: 224 IRQGFASFGRITEVRI------FKMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQLV 273
Score = 45.6 bits (103), Expect = 3e-05
Identities = 22/82 (26%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Frame = +3
Query: 243 RHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITF-ESEQVVNE 419
RH +FVG LSSE+ + +++ F FG++ + ++ D + KG+ F+++ + E+
Sbjct: 101 RHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERA 160
Query: 420 LLKTPKQTIGGKEVDVKRATPK 485
+ + Q +G + + AT K
Sbjct: 161 IEQMNGQWLGRRTIRTNWATRK 182
Score = 31.1 bits (67), Expect = 0.66
Identities = 11/36 (30%), Positives = 23/36 (63%)
Frame = +3
Query: 255 IFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTK 362
++VG L S +++D I F+ G++ + ++ FD+ K
Sbjct: 48 LYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDEMK 83
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 53.6 bits (123), Expect = 1e-07
Identities = 41/172 (23%), Positives = 85/172 (49%), Gaps = 23/172 (13%)
Frame = +3
Query: 15 LFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMAA- 191
+FVG LS + S++ L+ F+ +GE+ V D T +S+G+ F+ F + + +A
Sbjct: 137 VFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKGYGFVSFPNKQNAENAIAGM 196
Query: 192 -----GEHTI--------NSKKVDPK--------KAKARHGKIFVGGLSSEISDDEIKNF 308
G+ + NS++ K KA + ++VG +S + +D ++++
Sbjct: 197 NGKWIGKRAVRTNWAARKNSEENRDKLTFEQVFNSTKADNTSVYVGNISQQTTDADLRDL 256
Query: 309 FSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNE-LLKTPKQTIGGKEV 461
FS +G+I EV + K QR + F+ +E ++ + +++ + + G +V
Sbjct: 257 FSTYGDIAEVRI----FKTQR--YAFVRYEKKECATKAIMEMNGKEMAGNQV 302
Score = 47.6 bits (108), Expect = 7e-06
Identities = 19/70 (27%), Positives = 43/70 (61%)
Frame = +3
Query: 198 HTINSKKVDPKKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKG 377
H+ + ++ + ++H +FVG LS ++S++ +K+ F+ FG + E ++ D + KG
Sbjct: 118 HSASEPPMEMRIDTSKHFHVFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKG 177
Query: 378 FCFITFESEQ 407
+ F++F ++Q
Sbjct: 178 YGFVSFPNKQ 187
>Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical
protein F11A10.7 protein.
Length = 394
Score = 52.0 bits (119), Expect = 3e-07
Identities = 48/176 (27%), Positives = 80/176 (45%), Gaps = 24/176 (13%)
Frame = +3
Query: 15 LFVGGLSWETSDKELRDHFSAYGEIESINVK----------------TDPNTGRSRGFAF 146
+FVG + ++K +R FS +G I S+ ++ T + F
Sbjct: 145 VFVGNMPLTMNEKSVRRIFSDFGTISSVRMRNLLPANEKLTKRVTHLTGKLNDKQSSLTF 204
Query: 147 IV-FKAPDSIDKVMAAG-----EHTINSKKVDPKKAK-ARHGKIFVGGLSSEISDDEIKN 305
V F A +S++K + +H I KV KK + + IFVG L EI++D +
Sbjct: 205 YVKFGAEESVEKALKYNGTKLDDHVIRVDKVGSKKKEFGKDMAIFVGNLPFEITEDALIT 264
Query: 306 FFS-NFGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLKTPKQTIGGKEVDVK 470
FFS G + V + DK + KGF F+ F+ + V+ L +TI ++ D++
Sbjct: 265 FFSAQIGPVEAVRIVRDKDTGKGKGFAFVNFKQDSSVS--LALSMETIKMEKRDLR 318
Score = 49.2 bits (112), Expect = 2e-06
Identities = 27/76 (35%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Frame = +3
Query: 15 LFVGGLSWETSDKELRDHFSAY-GEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMAA 191
+FVG L +E ++ L FSA G +E++ + D +TG+ +GFAF+ FK S+ +A
Sbjct: 248 IFVGNLPFEITEDALITFFSAQIGPVEAVRIVRDKDTGKGKGFAFVNFKQDSSVS--LAL 305
Query: 192 GEHTINSKKVDPKKAK 239
TI +K D + K
Sbjct: 306 SMETIKMEKRDLRITK 321
>AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3c protein.
Length = 435
Score = 51.2 bits (117), Expect = 6e-07
Identities = 39/154 (25%), Positives = 66/154 (42%), Gaps = 22/154 (14%)
Frame = +3
Query: 6 RRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVF---------- 155
+R L + ++ +T ++L + FSA G + + + TD TGRS+G ++ F
Sbjct: 24 QRTLLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEFWDEESVPLGL 83
Query: 156 --------KAPDSIDKVMAAGEHTINSKKVDPKKAKARHGK----IFVGGLSSEISDDEI 299
AP I + A NS A K + V L +I + I
Sbjct: 84 ALNGQRLMGAPLQIQRTCAERNRAANSSVASTLGFVAPGNKGPTHVLVENLHPKIDEKMI 143
Query: 300 KNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFES 401
++ F +FG I ++++ D + R GF ITF +
Sbjct: 144 RDIFESFGRIEKIDLEVDSNRENR-GFATITFRN 176
Score = 32.7 bits (71), Expect = 0.22
Identities = 16/60 (26%), Positives = 30/60 (50%)
Frame = +3
Query: 294 EIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLKTPKQTIGGKEVDVKR 473
+++ FFS G + +V + D + KG C++ F E+ V L Q + G + ++R
Sbjct: 40 DLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEFWDEESVPLGLALNGQRLMGAPLQIQR 99
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 51.2 bits (117), Expect = 6e-07
Identities = 39/154 (25%), Positives = 66/154 (42%), Gaps = 22/154 (14%)
Frame = +3
Query: 6 RRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVF---------- 155
+R L + ++ +T ++L + FSA G + + + TD TGRS+G ++ F
Sbjct: 169 QRTLLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEFWDEESVPLGL 228
Query: 156 --------KAPDSIDKVMAAGEHTINSKKVDPKKAKARHGK----IFVGGLSSEISDDEI 299
AP I + A NS A K + V L +I + I
Sbjct: 229 ALNGQRLMGAPLQIQRTCAERNRAANSSVASTLGFVAPGNKGPTHVLVENLHPKIDEKMI 288
Query: 300 KNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFES 401
++ F +FG I ++++ D + R GF ITF +
Sbjct: 289 RDIFESFGRIEKIDLEVDSNRENR-GFATITFRN 321
Score = 32.7 bits (71), Expect = 0.22
Identities = 16/60 (26%), Positives = 30/60 (50%)
Frame = +3
Query: 294 EIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLKTPKQTIGGKEVDVKR 473
+++ FFS G + +V + D + KG C++ F E+ V L Q + G + ++R
Sbjct: 185 DLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEFWDEESVPLGLALNGQRLMGAPLQIQR 244
>Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical
protein B0035.12 protein.
Length = 836
Score = 50.8 bits (116), Expect = 8e-07
Identities = 47/173 (27%), Positives = 78/173 (45%), Gaps = 15/173 (8%)
Frame = +3
Query: 9 RKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGR-SRGFAFIVF----KAPDSI 173
R +FV L + T++ E+R A + SI N+ RGFA++V KA ++
Sbjct: 593 RTIFVSNLDFTTTEDEIRQ---AIEGVASIRFARKANSDLVHRGFAYVVMENDQKAQQAL 649
Query: 174 --DKVMAAGEHTINSKKVDPKK-------AKARHGKIFVGGLSSEISDDEIKNFFSNFGN 326
D+V G S DP+K K+FV + + +DDE+K FS FG
Sbjct: 650 LKDRVPVKGRPMFISAN-DPEKRVGFKFSTTLEKSKVFVRNVHFQATDDELKALFSKFGT 708
Query: 327 IIEVEMPFDKTKNQRKGFCFITFESEQVVNELLKT-PKQTIGGKEVDVKRATP 482
+ V K + KG F+ F++E + + + K + +E++V + P
Sbjct: 709 VTSVRRVTHK-DGKPKGIAFVDFDTEASAQKCVASGDKLMLRERELEVALSNP 760
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 49.6 bits (113), Expect = 2e-06
Identities = 21/57 (36%), Positives = 36/57 (63%)
Frame = +3
Query: 15 LFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVM 185
++VG ++T+++EL + FS+ G+I ++ + D TGR RGFAFI F S + +
Sbjct: 7 VYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQRAV 63
Score = 41.1 bits (92), Expect = 6e-04
Identities = 17/50 (34%), Positives = 29/50 (58%)
Frame = +3
Query: 255 IFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESE 404
++VG + +++E+ NFFS+ G I V + D+ + +GF FI F E
Sbjct: 7 VYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEE 56
>Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical
protein R10E4.2b protein.
Length = 409
Score = 49.6 bits (113), Expect = 2e-06
Identities = 33/136 (24%), Positives = 64/136 (47%), Gaps = 5/136 (3%)
Frame = +3
Query: 15 LFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMAAG 194
L++ GL T+D LR+ S YG I S D T +G+ F+ F++P + AA
Sbjct: 109 LYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESP----QAAAAA 164
Query: 195 EHTINSKKVDPKKAKARHGK-----IFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKT 359
+N++ V + AK + + +++ L + ++ ++ + FG +I +
Sbjct: 165 VDGLNTEGVQAQMAKLQQQEQDPTNLYIANLPLDFTEQMLETELNKFGMVISTRI-LRTP 223
Query: 360 KNQRKGFCFITFESEQ 407
NQ +G F +S++
Sbjct: 224 DNQSRGVGFARMDSKE 239
>Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical
protein R10E4.2a protein.
Length = 357
Score = 49.6 bits (113), Expect = 2e-06
Identities = 33/136 (24%), Positives = 64/136 (47%), Gaps = 5/136 (3%)
Frame = +3
Query: 15 LFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMAAG 194
L++ GL T+D LR+ S YG I S D T +G+ F+ F++P + AA
Sbjct: 83 LYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESP----QAAAAA 138
Query: 195 EHTINSKKVDPKKAKARHGK-----IFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKT 359
+N++ V + AK + + +++ L + ++ ++ + FG +I +
Sbjct: 139 VDGLNTEGVQAQMAKLQQQEQDPTNLYIANLPLDFTEQMLETELNKFGMVISTRI-LRTP 197
Query: 360 KNQRKGFCFITFESEQ 407
NQ +G F +S++
Sbjct: 198 DNQSRGVGFARMDSKE 213
>AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical
protein T08B6.5 protein.
Length = 177
Score = 49.2 bits (112), Expect = 2e-06
Identities = 17/71 (23%), Positives = 39/71 (54%)
Frame = +3
Query: 9 RKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMA 188
R ++VG + W+++ E+ +HF+ G++ + + D TG + FAF+ F+ +S+ +
Sbjct: 46 RSVYVGNVDWKSTVSEIEEHFAVCGKVARVTIPKDKFTGYQKNFAFVEFQKLESVQLALV 105
Query: 189 AGEHTINSKKV 221
++K+
Sbjct: 106 LSGTMFRNRKI 116
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 48.8 bits (111), Expect = 3e-06
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Frame = +3
Query: 222 DPKKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFES 401
DP ++ G IF+ L I + I + FS FGNI+ ++ D+ KG+ F+ FE+
Sbjct: 48 DPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDE-DGFSKGYGFVHFET 106
Query: 402 EQVV-NELLKTPKQTIGGKEVDVKRATPK 485
E+ N + K + GK+V V + P+
Sbjct: 107 EEAAQNAIQKVNGMLLAGKKVFVGKFQPR 135
Score = 46.0 bits (104), Expect = 2e-05
Identities = 27/72 (37%), Positives = 36/72 (50%)
Frame = +3
Query: 15 LFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMAAG 194
L+V L D L+ F +YG I S V TD N GRS+GF F+ F+ P+ +
Sbjct: 256 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTDEN-GRSKGFGFVCFEKPEEATSAVT-- 312
Query: 195 EHTINSKKVDPK 230
+NSK V K
Sbjct: 313 --EMNSKMVCSK 322
Score = 40.7 bits (91), Expect = 8e-04
Identities = 41/166 (24%), Positives = 70/166 (42%), Gaps = 27/166 (16%)
Frame = +3
Query: 69 FSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDK-VMAAGEHTINSKKVD-----PK 230
F+ +G I S V T G+S+GF F+ F P+ + V A + TI + +
Sbjct: 170 FAKFGNITSCEVMTVE--GKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLKLHVCRAQ 227
Query: 231 KAKARHGKI--------------------FVGGLSSEISDDEIKNFFSNFGNIIEVEMPF 350
K RH ++ +V L + DD +K F ++GNI ++
Sbjct: 228 KKSERHAELKKKHEQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMT 287
Query: 351 DKTKNQRKGFCFITFES-EQVVNELLKTPKQTIGGKEVDVKRATPK 485
D+ + KGF F+ FE E+ + + + + + K + V A K
Sbjct: 288 DE-NGRSKGFGFVCFEKPEEATSAVTEMNSKMVCSKPLYVAIAQRK 332
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 48.4 bits (110), Expect = 4e-06
Identities = 19/58 (32%), Positives = 35/58 (60%)
Frame = +3
Query: 255 IFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLK 428
+FVG +S ++S+D I++ FS GN++ ++M D+ + KG+ FI F Q ++
Sbjct: 20 VFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEFPDIQTAEVAIR 77
Score = 44.8 bits (101), Expect = 5e-05
Identities = 19/51 (37%), Positives = 32/51 (62%)
Frame = +3
Query: 3 TRRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVF 155
++R +FVG +S++ S+ +R FS G + SI + D TG+ +G+ FI F
Sbjct: 16 SQRSVFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEF 66
>U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 7 protein.
Length = 332
Score = 48.4 bits (110), Expect = 4e-06
Identities = 22/49 (44%), Positives = 34/49 (69%)
Frame = +3
Query: 9 RKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVF 155
R LFVG +++ETS+ +LR F AYG+I+ + + D G+ RG+AFI +
Sbjct: 104 RTLFVGRINYETSESKLRREFEAYGKIKKLTMVHD-EAGKPRGYAFIEY 151
>Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical
protein C17E4.5 protein.
Length = 205
Score = 47.2 bits (107), Expect = 9e-06
Identities = 18/77 (23%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Frame = +3
Query: 9 RKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMA 188
+ ++VG + + + +E+ HF G + + ++ D +G +GFA++ F + + +A
Sbjct: 78 KSVYVGNVDYGATAEEIEQHFHGCGSVSRVTIQCDRFSGHPKGFAYVEFTEKEGMQNALA 137
Query: 189 AGEHTINSK--KVDPKK 233
+ + + KVDPK+
Sbjct: 138 MTDSLLRGRQIKVDPKR 154
Score = 39.9 bits (89), Expect = 0.001
Identities = 18/80 (22%), Positives = 39/80 (48%)
Frame = +3
Query: 228 KKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQ 407
+KA+A ++VG + + +EI+ F G++ V + D+ KGF ++ F ++
Sbjct: 71 EKAEADAKSVYVGNVDYGATAEEIEQHFHGCGSVSRVTIQCDRFSGHPKGFAYVEFTEKE 130
Query: 408 VVNELLKTPKQTIGGKEVDV 467
+ L + G+++ V
Sbjct: 131 GMQNALAMTDSLLRGRQIKV 150
>U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (deleted
in azoospermia)homolog protein 1 protein.
Length = 498
Score = 47.2 bits (107), Expect = 9e-06
Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Frame = +3
Query: 252 KIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLK- 428
+IFVGG + ++ E++ F F + +V+M Q KG+ FITFE+E E+ K
Sbjct: 67 RIFVGGFPTSTTETELREHFEKFFAVKDVKM-VKSLDGQSKGYGFITFETEDQAEEIRKL 125
Query: 429 TPKQ 440
TPKQ
Sbjct: 126 TPKQ 129
Score = 45.6 bits (103), Expect = 3e-05
Identities = 24/97 (24%), Positives = 52/97 (53%)
Frame = +3
Query: 12 KLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMAA 191
++FVGG T++ ELR+HF + ++ + + + G+S+G+ FI F+ D +++
Sbjct: 67 RIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLD-GQSKGYGFITFETEDQAEEI--- 122
Query: 192 GEHTINSKKVDPKKAKARHGKIFVGGLSSEISDDEIK 302
+K+ PK+ + R K+ +G +I+ + +
Sbjct: 123 -------RKLTPKQLEFRSRKLNLGPAIRKINSNSFQ 152
>AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein.
Length = 499
Score = 47.2 bits (107), Expect = 9e-06
Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Frame = +3
Query: 252 KIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLK- 428
+IFVGG + ++ E++ F F + +V+M Q KG+ FITFE+E E+ K
Sbjct: 68 RIFVGGFPTSTTETELREHFEKFFAVKDVKM-VKSLDGQSKGYGFITFETEDQAEEIRKL 126
Query: 429 TPKQ 440
TPKQ
Sbjct: 127 TPKQ 130
Score = 45.6 bits (103), Expect = 3e-05
Identities = 24/97 (24%), Positives = 52/97 (53%)
Frame = +3
Query: 12 KLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMAA 191
++FVGG T++ ELR+HF + ++ + + + G+S+G+ FI F+ D +++
Sbjct: 68 RIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLD-GQSKGYGFITFETEDQAEEI--- 123
Query: 192 GEHTINSKKVDPKKAKARHGKIFVGGLSSEISDDEIK 302
+K+ PK+ + R K+ +G +I+ + +
Sbjct: 124 -------RKLTPKQLEFRSRKLNLGPAIRKINSNSFQ 153
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 46.0 bits (104), Expect = 2e-05
Identities = 27/72 (37%), Positives = 36/72 (50%)
Frame = +3
Query: 15 LFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMAAG 194
L+V L D L+ F +YG I S V TD N GRS+GF F+ F+ P+ +
Sbjct: 259 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTDEN-GRSKGFGFVCFEKPEEATSAVT-- 315
Query: 195 EHTINSKKVDPK 230
+NSK V K
Sbjct: 316 --EMNSKMVCSK 325
Score = 40.7 bits (91), Expect = 8e-04
Identities = 41/166 (24%), Positives = 70/166 (42%), Gaps = 27/166 (16%)
Frame = +3
Query: 69 FSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDK-VMAAGEHTINSKKVD-----PK 230
F+ +G I S V T G+S+GF F+ F P+ + V A + TI + +
Sbjct: 173 FAKFGNITSCEVMTVE--GKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLKLHVCRAQ 230
Query: 231 KAKARHGKI--------------------FVGGLSSEISDDEIKNFFSNFGNIIEVEMPF 350
K RH ++ +V L + DD +K F ++GNI ++
Sbjct: 231 KKSERHAELKKKHEQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMT 290
Query: 351 DKTKNQRKGFCFITFES-EQVVNELLKTPKQTIGGKEVDVKRATPK 485
D+ + KGF F+ FE E+ + + + + + K + V A K
Sbjct: 291 DE-NGRSKGFGFVCFEKPEEATSAVTEMNSKMVCSKPLYVAIAQRK 335
Score = 39.1 bits (87), Expect = 0.002
Identities = 21/61 (34%), Positives = 33/61 (54%)
Frame = +3
Query: 3 TRRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKV 182
T L+VG L + ++ L + FSA G + SI V D T S G+A++ F+ P ++
Sbjct: 30 TMASLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERA 89
Query: 183 M 185
M
Sbjct: 90 M 90
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 45.6 bits (103), Expect = 3e-05
Identities = 16/47 (34%), Positives = 33/47 (70%)
Frame = +3
Query: 15 LFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVF 155
++VG + ++ +++E+ ++F+A G + ++ + D TGR RGFAF+ F
Sbjct: 8 VYVGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEF 54
Score = 39.5 bits (88), Expect = 0.002
Identities = 14/50 (28%), Positives = 31/50 (62%)
Frame = +3
Query: 255 IFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESE 404
++VG + + +++EI N+F+ G++ V + +D+ + +GF F+ F E
Sbjct: 8 VYVGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEFSEE 57
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 45.6 bits (103), Expect = 3e-05
Identities = 21/69 (30%), Positives = 40/69 (57%), Gaps = 4/69 (5%)
Frame = +3
Query: 228 KKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITF---- 395
K +RH +FVG L SEI +++ F FG + E ++ D N+ KG+ F+++
Sbjct: 125 KPETSRHFHVFVGDLCSEIDSTKLREAFVKFGEVSEAKIIRDNNTNKGKGYGFVSYPRRE 184
Query: 396 ESEQVVNEL 422
++E+ ++E+
Sbjct: 185 DAERAIDEM 193
Score = 39.1 bits (87), Expect = 0.002
Identities = 15/57 (26%), Positives = 30/57 (52%)
Frame = +3
Query: 15 LFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVM 185
+FVG L E +LR+ F +GE+ + D NT + +G+ F+ + + ++ +
Sbjct: 134 VFVGDLCSEIDSTKLREAFVKFGEVSEAKIIRDNNTNKGKGYGFVSYPRREDAERAI 190
Score = 33.5 bits (73), Expect = 0.12
Identities = 25/91 (27%), Positives = 45/91 (49%), Gaps = 3/91 (3%)
Frame = +3
Query: 198 HTINSKKVDP--KKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQR 371
H + K D +A A + ++VG +++ + +DEI+ F FG I EV +
Sbjct: 237 HNQSEKTYDEIFNQAAADNTSVYVGNIAN-LGEDEIRRAFDRFGPINEVR------TFKI 289
Query: 372 KGFCFITFES-EQVVNELLKTPKQTIGGKEV 461
+G+ F+ FE+ E +++ IGG+ V
Sbjct: 290 QGYAFVKFETKESAARAIVQMNNADIGGQIV 320
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 45.2 bits (102), Expect = 4e-05
Identities = 17/47 (36%), Positives = 31/47 (65%)
Frame = +3
Query: 15 LFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVF 155
++VG ++T++ +L ++FS G + ++ + D TGR RGFAF+ F
Sbjct: 6 VYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEF 52
Score = 41.1 bits (92), Expect = 6e-04
Identities = 15/50 (30%), Positives = 29/50 (58%)
Frame = +3
Query: 255 IFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESE 404
++VG + ++D++ N+FS GN+ V + D+ + +GF F+ F E
Sbjct: 6 VYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTEE 55
>Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical
protein F22B5.2 protein.
Length = 256
Score = 43.6 bits (98), Expect = 1e-04
Identities = 18/47 (38%), Positives = 28/47 (59%)
Frame = +3
Query: 261 VGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFES 401
V L E+++DE+++ F G +I + + DK KGF F+TFES
Sbjct: 180 VTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFES 226
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/56 (35%), Positives = 30/56 (53%)
Frame = +3
Query: 21 VGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMA 188
V L E ++ ELRD F G + I + D TG +GFAF+ F++ D + +A
Sbjct: 180 VTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFESRDDAARAIA 235
>AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 43.6 bits (98), Expect = 1e-04
Identities = 46/173 (26%), Positives = 75/173 (43%), Gaps = 34/173 (19%)
Frame = +3
Query: 12 KLFVGGLSWETSDKELRDHFSAYGEI-ESINVKTDPNT-GR-----SRGFAFIVFKAPDS 170
K+FVGG+S + K + F +G + VK PN+ G+ S + F+V+ S
Sbjct: 206 KVFVGGISHMMNRKIINKFFGQFGTVFVDWPVKQKPNSRGKSIAIGSYSYLFLVYSDEQS 265
Query: 171 IDKVMAAGEHTINSK------------KVDP--------KKAKARHGKI-------FVGG 269
+ K+M+A + ++ P KARH +I F+GG
Sbjct: 266 VIKLMSACHRNSQNDFFVSVPGFRDMIQIRPWFIYNGFYILEKARHNRIIDIHRTVFLGG 325
Query: 270 LSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLK 428
L ++ +EI FS FG ++ V + D+ KG +TFE + N L+
Sbjct: 326 LPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFNRALE 378
Score = 39.1 bits (87), Expect = 0.002
Identities = 29/128 (22%), Positives = 51/128 (39%), Gaps = 8/128 (6%)
Frame = +3
Query: 66 HFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMAAGEHTINSKKVDPKKAKAR 245
HF ++ + + N + R K+ D + A HT+ + +
Sbjct: 144 HFGSFDSMSAYNFHNNNQQQRREAHVSRDGKSFDQGNIYTAEDVHTVVKNHRNENNQRVV 203
Query: 246 HGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQR--------KGFCFITFES 401
K+FVGG+S ++ I FF FG + V+ P + N R + F+ +
Sbjct: 204 SNKVFVGGISHMMNRKIINKFFGQFGTVF-VDWPVKQKPNSRGKSIAIGSYSYLFLVYSD 262
Query: 402 EQVVNELL 425
EQ V +L+
Sbjct: 263 EQSVIKLM 270
>AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 43.6 bits (98), Expect = 1e-04
Identities = 46/173 (26%), Positives = 75/173 (43%), Gaps = 34/173 (19%)
Frame = +3
Query: 12 KLFVGGLSWETSDKELRDHFSAYGEI-ESINVKTDPNT-GR-----SRGFAFIVFKAPDS 170
K+FVGG+S + K + F +G + VK PN+ G+ S + F+V+ S
Sbjct: 206 KVFVGGISHMMNRKIINKFFGQFGTVFVDWPVKQKPNSRGKSIAIGSYSYLFLVYSDEQS 265
Query: 171 IDKVMAAGEHTINSK------------KVDP--------KKAKARHGKI-------FVGG 269
+ K+M+A + ++ P KARH +I F+GG
Sbjct: 266 VIKLMSACHRNSQNDFFVSVPGFRDMIQIRPWFIYNGFYILEKARHNRIIDIHRTVFLGG 325
Query: 270 LSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLK 428
L ++ +EI FS FG ++ V + D+ KG +TFE + N L+
Sbjct: 326 LPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFNRALE 378
Score = 39.1 bits (87), Expect = 0.002
Identities = 29/128 (22%), Positives = 51/128 (39%), Gaps = 8/128 (6%)
Frame = +3
Query: 66 HFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMAAGEHTINSKKVDPKKAKAR 245
HF ++ + + N + R K+ D + A HT+ + +
Sbjct: 144 HFGSFDSMSAYNFHNNNQQQRREAHVSRDGKSFDQGNIYTAEDVHTVVKNHRNENNQRVV 203
Query: 246 HGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQR--------KGFCFITFES 401
K+FVGG+S ++ I FF FG + V+ P + N R + F+ +
Sbjct: 204 SNKVFVGGISHMMNRKIINKFFGQFGTVF-VDWPVKQKPNSRGKSIAIGSYSYLFLVYSD 262
Query: 402 EQVVNELL 425
EQ V +L+
Sbjct: 263 EQSVIKLM 270
>AC024810-13|AAK68518.1| 405|Caenorhabditis elegans Feminization of
germline protein1, isoform a protein.
Length = 405
Score = 43.6 bits (98), Expect = 1e-04
Identities = 20/61 (32%), Positives = 32/61 (52%)
Frame = +3
Query: 246 HGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELL 425
H +F+GGL ++ +EI FS FG ++ V + D+ KG +TFE + N L
Sbjct: 104 HRTVFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFNRAL 163
Query: 426 K 428
+
Sbjct: 164 E 164
>AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization of
germline protein1, isoform b protein.
Length = 619
Score = 43.6 bits (98), Expect = 1e-04
Identities = 46/173 (26%), Positives = 75/173 (43%), Gaps = 34/173 (19%)
Frame = +3
Query: 12 KLFVGGLSWETSDKELRDHFSAYGEI-ESINVKTDPNT-GR-----SRGFAFIVFKAPDS 170
K+FVGG+S + K + F +G + VK PN+ G+ S + F+V+ S
Sbjct: 206 KVFVGGISHMMNRKIINKFFGQFGTVFVDWPVKQKPNSRGKSIAIGSYSYLFLVYSDEQS 265
Query: 171 IDKVMAAGEHTINSK------------KVDP--------KKAKARHGKI-------FVGG 269
+ K+M+A + ++ P KARH +I F+GG
Sbjct: 266 VIKLMSACHRNSQNDFFVSVPGFRDMIQIRPWFIYNGFYILEKARHNRIIDIHRTVFLGG 325
Query: 270 LSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLK 428
L ++ +EI FS FG ++ V + D+ KG +TFE + N L+
Sbjct: 326 LPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFNRALE 378
Score = 39.1 bits (87), Expect = 0.002
Identities = 29/128 (22%), Positives = 51/128 (39%), Gaps = 8/128 (6%)
Frame = +3
Query: 66 HFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMAAGEHTINSKKVDPKKAKAR 245
HF ++ + + N + R K+ D + A HT+ + +
Sbjct: 144 HFGSFDSMSAYNFHNNNQQQRREAHVSRDGKSFDQGNIYTAEDVHTVVKNHRNENNQRVV 203
Query: 246 HGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQR--------KGFCFITFES 401
K+FVGG+S ++ I FF FG + V+ P + N R + F+ +
Sbjct: 204 SNKVFVGGISHMMNRKIINKFFGQFGTVF-VDWPVKQKPNSRGKSIAIGSYSYLFLVYSD 262
Query: 402 EQVVNELL 425
EQ V +L+
Sbjct: 263 EQSVIKLM 270
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 43.2 bits (97), Expect = 2e-04
Identities = 22/47 (46%), Positives = 29/47 (61%)
Frame = +3
Query: 15 LFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVF 155
L V LS T++K+LRD F +GEI ++ D +G SRGF FI F
Sbjct: 78 LGVFNLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYF 124
Score = 33.5 bits (73), Expect = 0.12
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +3
Query: 261 VGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITF 395
V LSS ++ ++++ F FG I + ++ +D+ +GF FI F
Sbjct: 80 VFNLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYF 124
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 43.2 bits (97), Expect = 2e-04
Identities = 18/53 (33%), Positives = 30/53 (56%)
Frame = +3
Query: 12 KLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDS 170
+LF+ L + T + +L+ F YGE+ + V D TG +GFA + F P++
Sbjct: 280 RLFLRNLPYATKEDDLQFLFKKYGEVSEVQVVIDKKTGACKGFAIVEFVFPEA 332
Score = 40.7 bits (91), Expect = 8e-04
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Frame = +3
Query: 12 KLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMAA 191
+L V L ++++LR F YG+I ++K G+ RGFAF+ F S +A
Sbjct: 4 RLIVKNLPSTCTEQQLRKFFEKYGQISDASLKYTKE-GKFRGFAFVGFLDEGSASNALAK 62
Query: 192 GEHT-INSKKVDPKKAK 239
T NSKK+ ++ +
Sbjct: 63 SNQTFFNSKKLTVEECR 79
>AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 43.2 bits (97), Expect = 2e-04
Identities = 17/50 (34%), Positives = 32/50 (64%)
Frame = +3
Query: 6 RRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVF 155
+R L+VGG + + ++K L F +G++ +I++ D +G+ RGF F+ F
Sbjct: 10 KRTLYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEF 59
Score = 42.3 bits (95), Expect = 3e-04
Identities = 19/81 (23%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Frame = +3
Query: 243 RHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFE-SEQVVNE 419
R ++VGG + ++++ + F FG+++ + +P D + +GF F+ F+ +E
Sbjct: 9 RKRTLYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEFDMAEDAAMA 68
Query: 420 LLKTPKQTIGGKEVDVKRATP 482
+ + + GK + V A P
Sbjct: 69 IDNMNESELFGKTIRVNFARP 89
>AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical
protein Y111B2A.18 protein.
Length = 258
Score = 41.5 bits (93), Expect = 5e-04
Identities = 22/72 (30%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Frame = +3
Query: 9 RKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFK-APDSIDKVM 185
+K++VG L + +KE+ D F YG I+ +++K +GR FAF+ F+ D+ D V
Sbjct: 9 QKVYVGNLPGDVREKEVEDIFHKYGRIKYVDIK----SGRGPAFAFVEFEDHRDAEDAVR 64
Query: 186 AAGEHTINSKKV 221
A + + +++
Sbjct: 65 ARDGYEFDGRRI 76
>AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein.
Length = 258
Score = 41.5 bits (93), Expect = 5e-04
Identities = 22/72 (30%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Frame = +3
Query: 9 RKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFK-APDSIDKVM 185
+K++VG L + +KE+ D F YG I+ +++K +GR FAF+ F+ D+ D V
Sbjct: 9 QKVYVGNLPGDVREKEVEDIFHKYGRIKYVDIK----SGRGPAFAFVEFEDHRDAEDAVR 64
Query: 186 AAGEHTINSKKV 221
A + + +++
Sbjct: 65 ARDGYEFDGRRI 76
>Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical
protein R07E5.14 protein.
Length = 142
Score = 41.1 bits (92), Expect = 6e-04
Identities = 18/72 (25%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Frame = +3
Query: 255 IFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLKTP 434
+FV + E ++D++ + FS +G I + + D+ KG+ + +E+++ NE +
Sbjct: 57 VFVTNIHEEATEDDVHDKFSEYGKIKNIHLNLDRRTGFLKGYALVEYETQKEANEAIDQS 116
Query: 435 KQT-IGGKEVDV 467
T + G+ V V
Sbjct: 117 NDTDLLGQNVKV 128
Score = 39.1 bits (87), Expect = 0.002
Identities = 16/63 (25%), Positives = 35/63 (55%)
Frame = +3
Query: 15 LFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMAAG 194
+FV + E ++ ++ D FS YG+I++I++ D TG +G+A + ++ ++ +
Sbjct: 57 VFVTNIHEEATEDDVHDKFSEYGKIKNIHLNLDRRTGFLKGYALVEYETQKEANEAIDQS 116
Query: 195 EHT 203
T
Sbjct: 117 NDT 119
>U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical
protein EEED8.4 protein.
Length = 191
Score = 41.1 bits (92), Expect = 6e-04
Identities = 16/71 (22%), Positives = 35/71 (49%)
Frame = +3
Query: 9 RKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMA 188
+ +F+G + + ++ +E+ +HF G+I + D T + + FA+I F SI+ +
Sbjct: 55 KSVFIGNVDFNSTIEEIEEHFKGCGQIVKTTIPKDKFTKKQKNFAYIEFDDSSSIENALV 114
Query: 189 AGEHTINSKKV 221
S+ +
Sbjct: 115 MNGSLFRSRPI 125
>U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical
protein F25B5.7d protein.
Length = 374
Score = 40.3 bits (90), Expect = 0.001
Identities = 40/144 (27%), Positives = 70/144 (48%), Gaps = 4/144 (2%)
Frame = +3
Query: 6 RRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVM 185
R +LFVG L E + EL++ FS +G+I + +GFAF+ D+
Sbjct: 115 RCRLFVGNLPNEVKETELKELFSPHGDIAECYLS-------GKGFAFLRL---DTRAHAE 164
Query: 186 AAGEHTINSKKVDPKKAKAR---HG-KIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFD 353
+A E I+ + + ++ + R HG I V LS +S++ + + FS+FG++ D
Sbjct: 165 SAKE-AIDGRIIHGRQVRVRFAVHGAAIRVKELSPTVSNEMLYHAFSHFGDVERAVHIVD 223
Query: 354 KTKNQRKGFCFITFESEQVVNELL 425
+ K + G + FE + NE +
Sbjct: 224 E-KGRPTGEGIVEFERKPNCNEAM 246
Score = 35.1 bits (77), Expect = 0.040
Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
Frame = +3
Query: 225 PKKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESE 404
PKK ++FVG L +E+ + E+K FS G+I E + KGF F+ ++
Sbjct: 108 PKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAECYL-------SGKGFAFLRLDTR 160
Query: 405 QVVNELLKT-PKQTIGGKEVDVKRA 476
+ + I G++V V+ A
Sbjct: 161 AHAESAKEAIDGRIIHGRQVRVRFA 185
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 40.3 bits (90), Expect = 0.001
Identities = 40/144 (27%), Positives = 70/144 (48%), Gaps = 4/144 (2%)
Frame = +3
Query: 6 RRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVM 185
R +LFVG L E + EL++ FS +G+I + +GFAF+ D+
Sbjct: 115 RCRLFVGNLPNEVKETELKELFSPHGDIAECYLS-------GKGFAFLRL---DTRAHAE 164
Query: 186 AAGEHTINSKKVDPKKAKAR---HG-KIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFD 353
+A E I+ + + ++ + R HG I V LS +S++ + + FS+FG++ D
Sbjct: 165 SAKE-AIDGRIIHGRQVRVRFAVHGAAIRVKELSPTVSNEMLYHAFSHFGDVERAVHIVD 223
Query: 354 KTKNQRKGFCFITFESEQVVNELL 425
+ K + G + FE + NE +
Sbjct: 224 E-KGRPTGEGIVEFERKPNCNEAM 246
Score = 35.1 bits (77), Expect = 0.040
Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
Frame = +3
Query: 225 PKKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESE 404
PKK ++FVG L +E+ + E+K FS G+I E + KGF F+ ++
Sbjct: 108 PKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAECYL-------SGKGFAFLRLDTR 160
Query: 405 QVVNELLKT-PKQTIGGKEVDVKRA 476
+ + I G++V V+ A
Sbjct: 161 AHAESAKEAIDGRIIHGRQVRVRFA 185
>U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical
protein EEED8.12 protein.
Length = 197
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/71 (22%), Positives = 34/71 (47%)
Frame = +3
Query: 9 RKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMA 188
+ +F+G + + ++ +E+ +HF G I + D T + + FA+I F SI+ +
Sbjct: 61 KSVFIGNVDFNSTIEEVEEHFKGCGHIVRTTIPKDKFTKKQKNFAYIEFDDSSSIENALV 120
Query: 189 AGEHTINSKKV 221
S+ +
Sbjct: 121 MNGSLFRSRPI 131
>AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily
assigned gene nameprotein 262 protein.
Length = 302
Score = 39.5 bits (88), Expect = 0.002
Identities = 17/79 (21%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Frame = +3
Query: 252 KIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITF-ESEQVVNELLK 428
++F G L +E+SD+ + F + + + ++ + N+ KG+ F++F +SE V + +
Sbjct: 204 RVFCGDLGNEVSDELLAKAFRKYPSFQKAKVVRESRTNKSKGYGFVSFRDSEDYVRAMRE 263
Query: 429 TPKQTIGGKEVDVKRATPK 485
+ +G + + ++++ K
Sbjct: 264 MDGKYVGNRPIKLRKSAWK 282
>U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform b protein.
Length = 126
Score = 39.1 bits (87), Expect = 0.002
Identities = 16/47 (34%), Positives = 29/47 (61%)
Frame = +3
Query: 15 LFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVF 155
L + LS++T+ +LR F YG+I +++ D + +S+GF F+ F
Sbjct: 21 LKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRF 67
>U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform a protein.
Length = 196
Score = 39.1 bits (87), Expect = 0.002
Identities = 16/47 (34%), Positives = 29/47 (61%)
Frame = +3
Query: 15 LFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVF 155
L + LS++T+ +LR F YG+I +++ D + +S+GF F+ F
Sbjct: 21 LKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRF 67
>U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle
orientation defective protein4 protein.
Length = 351
Score = 38.7 bits (86), Expect = 0.003
Identities = 21/86 (24%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Frame = +3
Query: 3 TRRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKV 182
T +++V + + +++L F AYG + S+ + T N S+GF F+ + +S +K
Sbjct: 49 TDNRIYVSNIPFSFREQDLAAMFFAYGRVLSVEIVT--NDRGSKGFGFVTLDSIESCEKA 106
Query: 183 MAA-GEHTINSKKVDPKKAKARHGKI 257
AA E + + ++ ++A K+
Sbjct: 107 RAALHESHVQGRIIEVRRATPTRRKL 132
>AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein.
Length = 351
Score = 38.7 bits (86), Expect = 0.003
Identities = 21/86 (24%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Frame = +3
Query: 3 TRRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKV 182
T +++V + + +++L F AYG + S+ + T N S+GF F+ + +S +K
Sbjct: 49 TDNRIYVSNIPFSFREQDLAAMFFAYGRVLSVEIVT--NDRGSKGFGFVTLDSIESCEKA 106
Query: 183 MAA-GEHTINSKKVDPKKAKARHGKI 257
AA E + + ++ ++A K+
Sbjct: 107 RAALHESHVQGRIIEVRRATPTRRKL 132
>Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical
protein F26A3.2 protein.
Length = 154
Score = 37.1 bits (82), Expect = 0.010
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = +3
Query: 255 IFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQ 407
++VG LS +D++ F G++ V M D+ K GFCF+ + + +
Sbjct: 39 LYVGNLSYYTKEDQVYELFGRAGDVRRVIMGLDRFKKTPCGFCFVEYYTRE 89
Score = 28.3 bits (60), Expect = 4.6
Identities = 17/85 (20%), Positives = 39/85 (45%)
Frame = +3
Query: 15 LFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMAAG 194
L+VG LS+ T + ++ + F G++ + + D GF F+ + + + +
Sbjct: 39 LYVGNLSYYTKEDQVYELFGRAGDVRRVIMGLDRFKKTPCGFCFVEYYTREDAELAL--- 95
Query: 195 EHTINSKKVDPKKAKARHGKIFVGG 269
I++ ++D + +A F+ G
Sbjct: 96 -QNISNTRMDDRVIRADWDAGFIEG 119
>AF003141-14|AAM48549.1| 362|Caenorhabditis elegans Hypothetical
protein W02D3.11b protein.
Length = 362
Score = 37.1 bits (82), Expect = 0.010
Identities = 20/66 (30%), Positives = 34/66 (51%)
Frame = +3
Query: 27 GLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMAAGEHTI 206
GL WE +++ELRD F G IES+ + GR+ G A +VF + + + +
Sbjct: 11 GLPWEATEQELRDFFGNNG-IESLEIPR--RNGRTSGDAKVVFTNEEDYNNALKKDREHL 67
Query: 207 NSKKVD 224
S+ ++
Sbjct: 68 GSRYIE 73
>AF003141-13|AAK21490.1| 549|Caenorhabditis elegans Hypothetical
protein W02D3.11a protein.
Length = 549
Score = 37.1 bits (82), Expect = 0.010
Identities = 20/66 (30%), Positives = 34/66 (51%)
Frame = +3
Query: 27 GLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMAAGEHTI 206
GL WE +++ELRD F G IES+ + GR+ G A +VF + + + +
Sbjct: 11 GLPWEATEQELRDFFGNNG-IESLEIPR--RNGRTSGDAKVVFTNEEDYNNALKKDREHL 67
Query: 207 NSKKVD 224
S+ ++
Sbjct: 68 GSRYIE 73
>U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor
U2AF65 protein.
Length = 496
Score = 36.7 bits (81), Expect = 0.013
Identities = 15/59 (25%), Positives = 36/59 (61%)
Frame = +3
Query: 12 KLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMA 188
K+F+GGL ++ ++++ ++G +++ ++ D + G S+G+AF + P D+ +A
Sbjct: 292 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVD-SQGNSKGYAFAEYLDPTLTDQAIA 349
Score = 35.9 bits (79), Expect = 0.023
Identities = 19/76 (25%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Frame = +3
Query: 252 KIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLK- 428
KIF+GGL + +++D++K +FG + + D N KG+ F + + ++ +
Sbjct: 292 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNS-KGYAFAEYLDPTLTDQAIAG 350
Query: 429 TPKQTIGGKEVDVKRA 476
+G K++ V+ A
Sbjct: 351 LNGMQLGDKQLVVQLA 366
>AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing
factor protein 1,isoform a protein.
Length = 496
Score = 36.7 bits (81), Expect = 0.013
Identities = 15/59 (25%), Positives = 36/59 (61%)
Frame = +3
Query: 12 KLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMA 188
K+F+GGL ++ ++++ ++G +++ ++ D + G S+G+AF + P D+ +A
Sbjct: 292 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVD-SQGNSKGYAFAEYLDPTLTDQAIA 349
Score = 35.9 bits (79), Expect = 0.023
Identities = 19/76 (25%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Frame = +3
Query: 252 KIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLK- 428
KIF+GGL + +++D++K +FG + + D N KG+ F + + ++ +
Sbjct: 292 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNS-KGYAFAEYLDPTLTDQAIAG 350
Query: 429 TPKQTIGGKEVDVKRA 476
+G K++ V+ A
Sbjct: 351 LNGMQLGDKQLVVQLA 366
>AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing
factor protein 1,isoform d protein.
Length = 471
Score = 36.7 bits (81), Expect = 0.013
Identities = 15/59 (25%), Positives = 36/59 (61%)
Frame = +3
Query: 12 KLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMA 188
K+F+GGL ++ ++++ ++G +++ ++ D + G S+G+AF + P D+ +A
Sbjct: 267 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVD-SQGNSKGYAFAEYLDPTLTDQAIA 324
Score = 35.9 bits (79), Expect = 0.023
Identities = 19/76 (25%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Frame = +3
Query: 252 KIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLK- 428
KIF+GGL + +++D++K +FG + + D N KG+ F + + ++ +
Sbjct: 267 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNS-KGYAFAEYLDPTLTDQAIAG 325
Query: 429 TPKQTIGGKEVDVKRA 476
+G K++ V+ A
Sbjct: 326 LNGMQLGDKQLVVQLA 341
>AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing
factor protein 1,isoform c protein.
Length = 474
Score = 36.7 bits (81), Expect = 0.013
Identities = 15/59 (25%), Positives = 36/59 (61%)
Frame = +3
Query: 12 KLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMA 188
K+F+GGL ++ ++++ ++G +++ ++ D + G S+G+AF + P D+ +A
Sbjct: 270 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVD-SQGNSKGYAFAEYLDPTLTDQAIA 327
Score = 35.9 bits (79), Expect = 0.023
Identities = 19/76 (25%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Frame = +3
Query: 252 KIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLK- 428
KIF+GGL + +++D++K +FG + + D N KG+ F + + ++ +
Sbjct: 270 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNS-KGYAFAEYLDPTLTDQAIAG 328
Query: 429 TPKQTIGGKEVDVKRA 476
+G K++ V+ A
Sbjct: 329 LNGMQLGDKQLVVQLA 344
>Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical
protein R05H10.2 protein.
Length = 608
Score = 35.5 bits (78), Expect = 0.031
Identities = 14/50 (28%), Positives = 31/50 (62%)
Frame = +3
Query: 15 LFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAP 164
+F+ LS++T ++ +++ S +G+I+ + ++G S+G AF+ F P
Sbjct: 265 VFLRNLSYDTKEELIKEELSKFGKIDLAIICKYKDSGHSKGTAFVHFSTP 314
>U23450-1|AAK31467.2| 422|Caenorhabditis elegans Cpeb polya binding
family protein 2 protein.
Length = 422
Score = 35.5 bits (78), Expect = 0.031
Identities = 15/32 (46%), Positives = 23/32 (71%)
Frame = +3
Query: 252 KIFVGGLSSEISDDEIKNFFSNFGNIIEVEMP 347
K+FVGGL S + + +I NFFS +G ++V+ P
Sbjct: 89 KVFVGGLPSCVKESDILNFFSRYGR-LQVDWP 119
Score = 27.9 bits (59), Expect = 6.1
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +3
Query: 9 RKLFVGGLSWETSDKELRDHFSAYGEIE 92
RK+FVGGL + ++ + FS YG ++
Sbjct: 88 RKVFVGGLPSCVKESDILNFFSRYGRLQ 115
>Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical
protein W02B12.3c protein.
Length = 150
Score = 35.1 bits (77), Expect = 0.040
Identities = 19/79 (24%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Frame = +3
Query: 252 KIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLKT 431
+I++G L+S +S+ +I++FF +G I +V + + GF F+ F+ ++ + +
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLL--------KNGFGFVEFDDKRDAEDAVHD 55
Query: 432 PK-QTIGGKEVDVKRATPK 485
+ +GG+ V + + P+
Sbjct: 56 LNGKELGGERVILDYSKPR 74
Score = 30.3 bits (65), Expect = 1.2
Identities = 22/86 (25%), Positives = 40/86 (46%)
Frame = +3
Query: 12 KLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMAA 191
++++G L+ S+K++ F YG+I + +K GF F+ F D D A
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLK--------NGFGFVEF--DDKRDAEDAV 53
Query: 192 GEHTINSKKVDPKKAKARHGKIFVGG 269
H +N K++ ++ + K GG
Sbjct: 54 --HDLNGKELGGERVILDYSKPRGGG 77
>Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical
protein W02B12.3b protein.
Length = 148
Score = 35.1 bits (77), Expect = 0.040
Identities = 19/79 (24%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Frame = +3
Query: 252 KIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLKT 431
+I++G L+S +S+ +I++FF +G I +V + + GF F+ F+ ++ + +
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLL--------KNGFGFVEFDDKRDAEDAVHD 55
Query: 432 PK-QTIGGKEVDVKRATPK 485
+ +GG+ V + + P+
Sbjct: 56 LNGKELGGERVILDYSKPR 74
Score = 30.3 bits (65), Expect = 1.2
Identities = 22/86 (25%), Positives = 40/86 (46%)
Frame = +3
Query: 12 KLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMAA 191
++++G L+ S+K++ F YG+I + +K GF F+ F D D A
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLK--------NGFGFVEF--DDKRDAEDAV 53
Query: 192 GEHTINSKKVDPKKAKARHGKIFVGG 269
H +N K++ ++ + K GG
Sbjct: 54 --HDLNGKELGGERVILDYSKPRGGG 77
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 35.1 bits (77), Expect = 0.040
Identities = 19/79 (24%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Frame = +3
Query: 252 KIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLKT 431
+I++G L+S +S+ +I++FF +G I +V + + GF F+ F+ ++ + +
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLL--------KNGFGFVEFDDKRDAEDAVHD 55
Query: 432 PK-QTIGGKEVDVKRATPK 485
+ +GG+ V + + P+
Sbjct: 56 LNGKELGGERVILDYSKPR 74
Score = 30.3 bits (65), Expect = 1.2
Identities = 22/86 (25%), Positives = 40/86 (46%)
Frame = +3
Query: 12 KLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMAA 191
++++G L+ S+K++ F YG+I + +K GF F+ F D D A
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLK--------NGFGFVEF--DDKRDAEDAV 53
Query: 192 GEHTINSKKVDPKKAKARHGKIFVGG 269
H +N K++ ++ + K GG
Sbjct: 54 --HDLNGKELGGERVILDYSKPRGGG 77
>Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 34.3 bits (75), Expect = 0.071
Identities = 19/55 (34%), Positives = 31/55 (56%)
Frame = +3
Query: 15 LFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDK 179
LFV L+ T+D++L FS +G+I + + D +G S +AFI F S ++
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQ 297
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = +3
Query: 255 IFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFES 401
+FV L+ +D++++ FS FG I E+ D+ + FI F++
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDN 291
>Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 34.3 bits (75), Expect = 0.071
Identities = 19/55 (34%), Positives = 31/55 (56%)
Frame = +3
Query: 15 LFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDK 179
LFV L+ T+D++L FS +G+I + + D +G S +AFI F S ++
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQ 297
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = +3
Query: 255 IFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFES 401
+FV L+ +D++++ FS FG I E+ D+ + FI F++
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDN 291
>Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical
protein F39H2.2b protein.
Length = 358
Score = 34.3 bits (75), Expect = 0.071
Identities = 19/55 (34%), Positives = 31/55 (56%)
Frame = +3
Query: 15 LFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDK 179
LFV L+ T+D++L FS +G+I + + D +G S +AFI F S ++
Sbjct: 174 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQ 228
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = +3
Query: 255 IFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFES 401
+FV L+ +D++++ FS FG I E+ D+ + FI F++
Sbjct: 174 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDN 222
>U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical
protein F25B5.7b protein.
Length = 165
Score = 34.3 bits (75), Expect = 0.071
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +3
Query: 225 PKKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIE 335
PKK ++FVG L +E+ + E+K FS G+I E
Sbjct: 108 PKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAE 144
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +3
Query: 6 RRKLFVGGLSWETSDKELRDHFSAYGEI 89
R +LFVG L E + EL++ FS +G+I
Sbjct: 115 RCRLFVGNLPNEVKETELKELFSPHGDI 142
>AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical
protein ZK616.1 protein.
Length = 491
Score = 34.3 bits (75), Expect = 0.071
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +3
Query: 252 KIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPF-DKTKNQRKGFCFITFESEQVVNELL 425
+++VGG S+ +S ++I+N + EV + + + +GF F+ S N LL
Sbjct: 10 RLYVGGFSTNLSSEQIRNLITQLAAPFEVSIDIVENGSRKHRGFAFVQCRSLAEANVLL 68
>Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical
protein R74.5a protein.
Length = 404
Score = 33.9 bits (74), Expect = 0.093
Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 2/84 (2%)
Frame = +3
Query: 9 RKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMA 188
R+L V + ++ + +L F G + ++V+ N S+GF F+ + PD D+ A
Sbjct: 100 RRLHVSNIPFKYREPDLTAMFEKVGPV--VDVEIIFNERGSKGFGFVTMQNPDDADRARA 157
Query: 189 A-GEHTINSKKVDPKKAKAR-HGK 254
TI ++V+ A R H K
Sbjct: 158 EFNGTTIEGRRVEVNLATQRVHNK 181
>DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding
protein ASD-1 protein.
Length = 404
Score = 33.9 bits (74), Expect = 0.093
Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 2/84 (2%)
Frame = +3
Query: 9 RKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMA 188
R+L V + ++ + +L F G + ++V+ N S+GF F+ + PD D+ A
Sbjct: 100 RRLHVSNIPFKYREPDLTAMFEKVGPV--VDVEIIFNERGSKGFGFVTMQNPDDADRARA 157
Query: 189 A-GEHTINSKKVDPKKAKAR-HGK 254
TI ++V+ A R H K
Sbjct: 158 EFNGTTIEGRRVEVNLATQRVHNK 181
>Z68879-10|CAA93082.2| 473|Caenorhabditis elegans Hypothetical
protein K08F4.2 protein.
Length = 473
Score = 33.5 bits (73), Expect = 0.12
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 11/76 (14%)
Frame = +3
Query: 234 AKARHGKIFVGGLSSEI-------SDDEIKNFFSNFGNIIEVEMP---FDKTKNQRK-GF 380
A KI++GG++ EI ++ EIK F +G I EV MP D + K F
Sbjct: 321 ANLNERKIYLGGITREIVPSNTAQAESEIKQVFYKYGEIEEVRMPRKVLDSPNDTSKHAF 380
Query: 381 CFITFESEQVVNELLK 428
FIT ++ V + +
Sbjct: 381 AFITMRNKAGVKAIFE 396
Score = 31.5 bits (68), Expect = 0.50
Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 11/72 (15%)
Frame = +3
Query: 9 RKLFVGGLSWET-------SDKELRDHFSAYGEIESI----NVKTDPNTGRSRGFAFIVF 155
RK+++GG++ E ++ E++ F YGEIE + V PN FAFI
Sbjct: 326 RKIYLGGITREIVPSNTAQAESEIKQVFYKYGEIEEVRMPRKVLDSPNDTSKHAFAFITM 385
Query: 156 KAPDSIDKVMAA 191
+ + + A
Sbjct: 386 RNKAGVKAIFEA 397
>AF003145-3|AAB57717.1| 751|Caenorhabditis elegans Cpeb polya
binding family protein 3 protein.
Length = 751
Score = 33.1 bits (72), Expect = 0.16
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +3
Query: 9 RKLFVGGLSWETSDKELRDHFSAYG 83
RK+FVGG+ W+ ++ L+D F +G
Sbjct: 295 RKIFVGGVPWDITEAALKDSFGEFG 319
Score = 28.7 bits (61), Expect = 3.5
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +3
Query: 252 KIFVGGLSSEISDDEIKNFFSNFGNIIEVEMP 347
KIFVGG+ +I++ +K+ F FG+ VE P
Sbjct: 296 KIFVGGVPWDITEAALKDSFGEFGS-CAVEWP 326
>Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 32.3 bits (70), Expect = 0.29
Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 1/94 (1%)
Frame = +3
Query: 192 GEHTINSKKVDPKKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIE-VEMPFDKTKNQ 368
G+HT + + K +FVG +S + SD+ I+ + GN+ + K Q
Sbjct: 31 GQHTPAQQS---SQQKPDSSPVFVGNISDKCSDEFIRKILNECGNVASWKRIKGSNGKLQ 87
Query: 369 RKGFCFITFESEQVVNELLKTPKQTIGGKEVDVK 470
GFC T + E + L + +G K++ VK
Sbjct: 88 GFGFCHFT-DLEGTLRALRILHEFHLGDKKLTVK 120
>Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 32.3 bits (70), Expect = 0.29
Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 1/94 (1%)
Frame = +3
Query: 192 GEHTINSKKVDPKKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIE-VEMPFDKTKNQ 368
G+HT + + K +FVG +S + SD+ I+ + GN+ + K Q
Sbjct: 31 GQHTPAQQS---SQQKPDSSPVFVGNISDKCSDEFIRKILNECGNVASWKRIKGSNGKLQ 87
Query: 369 RKGFCFITFESEQVVNELLKTPKQTIGGKEVDVK 470
GFC T + E + L + +G K++ VK
Sbjct: 88 GFGFCHFT-DLEGTLRALRILHEFHLGDKKLTVK 120
>Z19154-9|CAA79552.2| 559|Caenorhabditis elegans Hypothetical
protein C40H1.1 protein.
Length = 559
Score = 32.3 bits (70), Expect = 0.29
Identities = 23/97 (23%), Positives = 43/97 (44%), Gaps = 15/97 (15%)
Frame = +3
Query: 180 VMAAGEHTINSKKVDPKKAKARHG-KIFVGGLSSEISDDEIKNFFSNFGNII-------- 332
+M + + + K P A+ + K+F+GGL ++S++++ F FG ++
Sbjct: 221 LMGVSKSCLEASKKRPISAEPLYSRKVFIGGLPIDVSEEQVWATFGAFGKVLIDWPRRPE 280
Query: 333 ----EVEMPFDKTKNQR--KGFCFITFESEQVVNELL 425
E K R G+ F+ F E+ V EL+
Sbjct: 281 HNAERAEQELKKGSGSRAVTGYVFLVFTHERSVQELV 317
Score = 32.3 bits (70), Expect = 0.29
Identities = 19/80 (23%), Positives = 37/80 (46%), Gaps = 5/80 (6%)
Frame = +3
Query: 6 RRKLFVGGLSWETSDKELRDHFSA-YGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKV 182
RR +F+GG+ T ++L YG++ + + DP +G A + F + +
Sbjct: 364 RRTVFIGGVPRPTRAQDLARCLEGHYGKVSYVGIDIDPELKYPKGAARVTFSTSQAFVRA 423
Query: 183 MAAG----EHTINSKKVDPK 230
++ H N+K+V+ K
Sbjct: 424 ISGRFVQVNHAENNKRVEIK 443
Score = 28.3 bits (60), Expect = 4.6
Identities = 10/27 (37%), Positives = 20/27 (74%)
Frame = +3
Query: 9 RKLFVGGLSWETSDKELRDHFSAYGEI 89
RK+F+GGL + S++++ F A+G++
Sbjct: 245 RKVFIGGLPIDVSEEQVWATFGAFGKV 271
>Z99281-6|CAB54458.2| 625|Caenorhabditis elegans Hypothetical
protein Y57G11C.9b protein.
Length = 625
Score = 31.9 bits (69), Expect = 0.38
Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Frame = +3
Query: 198 HTINSKKVDPKKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDK-TKNQRK 374
H N +++ + IF+ GL +IS +EIK + + ++ F K +++ K
Sbjct: 33 HYNNLPRINETQVPQSKHTIFIRGLHGDISTEEIKEYIGE--KVGKISFDFVKVAQDKSK 90
Query: 375 GFCFITFESEQVVNELLKT 431
F + FE+ E ++T
Sbjct: 91 IFVAVRFENRDEAKEFMET 109
>Z99281-5|CAB54457.1| 553|Caenorhabditis elegans Hypothetical
protein Y57G11C.9a protein.
Length = 553
Score = 31.9 bits (69), Expect = 0.38
Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Frame = +3
Query: 198 HTINSKKVDPKKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDK-TKNQRK 374
H N +++ + IF+ GL +IS +EIK + + ++ F K +++ K
Sbjct: 33 HYNNLPRINETQVPQSKHTIFIRGLHGDISTEEIKEYIGE--KVGKISFDFVKVAQDKSK 90
Query: 375 GFCFITFESEQVVNELLKT 431
F + FE+ E ++T
Sbjct: 91 IFVAVRFENRDEAKEFMET 109
>U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform c protein.
Length = 118
Score = 31.9 bits (69), Expect = 0.38
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = +3
Query: 252 KIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFE 398
K++VGGL S+ + E++ F FG I +V + + GF F+ ++
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWV-----ARRPPGFAFVEYD 47
>U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform b protein.
Length = 153
Score = 31.9 bits (69), Expect = 0.38
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = +3
Query: 252 KIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFE 398
K++VGGL S+ + E++ F FG I +V + + GF F+ ++
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWV-----ARRPPGFAFVEYD 47
>U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform a protein.
Length = 179
Score = 31.9 bits (69), Expect = 0.38
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = +3
Query: 252 KIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFE 398
K++VGGL S+ + E++ F FG I +V + + GF F+ ++
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWV-----ARRPPGFAFVEYD 47
>AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical
protein C50D2.5 protein.
Length = 138
Score = 31.9 bits (69), Expect = 0.38
Identities = 15/50 (30%), Positives = 29/50 (58%)
Frame = +3
Query: 9 RKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFK 158
R L++ L ++ + +E+ + F +G + I V NT +RG AF+V++
Sbjct: 19 RILYIKNLPYKITTEEMYEIFGKFGAVRQIRVG---NTAETRGTAFVVYE 65
>Z99279-4|CAB16494.1| 121|Caenorhabditis elegans Hypothetical
protein Y57G11A.5 protein.
Length = 121
Score = 31.1 bits (67), Expect = 0.66
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 6/56 (10%)
Frame = +3
Query: 9 RKLFVGGLSWETSDKEL-RDHFSAYGEIESI-----NVKTDPNTGRSRGFAFIVFK 158
R+++VG + ++ ++KEL D + Y IE++ +K+ R GFAF+ FK
Sbjct: 17 RQVYVGNMPFDATEKELNNDALTIYDAIEAVFSVMGPIKSIWMAKRPPGFAFVTFK 72
>Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical
protein T12D8.2 protein.
Length = 207
Score = 31.1 bits (67), Expect = 0.66
Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = +3
Query: 279 EISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLK-TPKQTIGGK 455
+ +D+E+K F ++ + D+ KGF ++TFE+EQ +N + G +
Sbjct: 30 KFTDEELKKF--------DIHLVHDRDSGSFKGFAYVTFENEQQMNTAISGLNGADFGNR 81
Query: 456 EVDVKRA 476
+ V RA
Sbjct: 82 VLKVNRA 88
>Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical
protein W02B12.2 protein.
Length = 281
Score = 31.1 bits (67), Expect = 0.66
Identities = 16/70 (22%), Positives = 38/70 (54%)
Frame = +3
Query: 252 KIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLKT 431
++++G L + SD ++++FF +G + +V M + GF F+ F+ ++ ++ +
Sbjct: 3 RVYIGRLPNRASDRDVEHFFRGYGKLSDVIM--------KNGFGFVDFQDQRDADDAV-- 52
Query: 432 PKQTIGGKEV 461
+ GKE+
Sbjct: 53 --HDLNGKEL 60
>Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical
protein T04A8.6 protein.
Length = 307
Score = 31.1 bits (67), Expect = 0.66
Identities = 9/41 (21%), Positives = 24/41 (58%)
Frame = +3
Query: 288 DDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQV 410
+ E+ +F FGN++ + + ++ KG+ ++ F+++ V
Sbjct: 45 EKELLGYFRQFGNVLRIRVARNRRTGNHKGWAYVGFDNKAV 85
>Z99277-2|CAB16487.1| 557|Caenorhabditis elegans Hypothetical
protein Y53C12A.3 protein.
Length = 557
Score = 30.7 bits (66), Expect = 0.87
Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +3
Query: 21 VGGLSWETSDKELRDHFSAYGEIESIN--VKTDPNTGRSRGFAFIVFKAPDSI 173
+G + WE K+++D F +YG I+ DP R+R + + P I
Sbjct: 69 LGKMMWEAGSKQVQDTFQSYGRIDLFRPYFDVDPAEVRTRLIRSFIPRKPSQI 121
>U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical
protein C27H5.3 protein.
Length = 448
Score = 30.7 bits (66), Expect = 0.87
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 6/56 (10%)
Frame = +3
Query: 6 RRKLFVGGLSWETSDKELRDHFSAYGEIES------INVKTDPNTGRSRGFAFIVF 155
+ +FV G+S ++ + D FS G+I I + TD NTG +G I F
Sbjct: 200 KETVFVQGISTTANEAYIADVFSTCGDIAKNDRGPRIKIYTDRNTGEPKGECMITF 255
Score = 28.7 bits (61), Expect = 3.5
Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 6/53 (11%)
Frame = +3
Query: 255 IFVGGLSSEISDDEIKNFFSNFGNIIE------VEMPFDKTKNQRKGFCFITF 395
+FV G+S+ ++ I + FS G+I + +++ D+ + KG C ITF
Sbjct: 203 VFVQGISTTANEAYIADVFSTCGDIAKNDRGPRIKIYTDRNTGEPKGECMITF 255
>U28944-8|AAK68193.1| 103|Caenorhabditis elegans Hypothetical
protein C18A3.5c protein.
Length = 103
Score = 29.5 bits (63), Expect = 2.0
Identities = 10/34 (29%), Positives = 22/34 (64%)
Frame = +3
Query: 255 IFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDK 356
++VG L S +++D I F+ G++ + ++ FD+
Sbjct: 48 LYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDE 81
>U23484-7|ABB88232.1| 738|Caenorhabditis elegans Hypothetical
protein EEED8.10a protein.
Length = 738
Score = 29.5 bits (63), Expect = 2.0
Identities = 29/105 (27%), Positives = 43/105 (40%), Gaps = 10/105 (9%)
Frame = +3
Query: 9 RKLFVGGLSWETSDKELRDHFSAYGEIESI-----NVKTD-----PNTGRSRGFAFIVFK 158
RK+ V +S + + +L+ FS YG+I S KT P R+ G A I FK
Sbjct: 112 RKIVVSNISAKVTQSQLQSFFSQYGKITSCILPREEKKTSVFGTLPKHSRNCGTATITFK 171
Query: 159 APDSIDKVMAAGEHTINSKKVDPKKAKARHGKIFVGGLSSEISDD 293
+ D+ A + K D + + GG +SDD
Sbjct: 172 KSEHADRAKNANPEEL--KFYDQVMVVSAYVSKKRGGKGLVLSDD 214
>Z81069-1|CAB02990.1| 359|Caenorhabditis elegans Hypothetical
protein F25H9.1 protein.
Length = 359
Score = 29.1 bits (62), Expect = 2.7
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +3
Query: 303 NFFSNFGNIIEVEMPFDKTKNQRKGFCFIT 392
++F+N+ N+I+ E +D+ R FCFIT
Sbjct: 238 DYFTNYENLIKNESYYDEGIQCRGHFCFIT 267
>CU457737-8|CAM36329.1| 811|Caenorhabditis elegans Hypothetical
protein C52D10.12 protein.
Length = 811
Score = 28.7 bits (61), Expect = 3.5
Identities = 18/45 (40%), Positives = 25/45 (55%)
Frame = -2
Query: 253 LPCLAFAFLGSTFLLLIVCSPAAITLSIESGALKTMNANPRDLPV 119
L CL+ F G T L L+ +P + L I+SGA+K + LPV
Sbjct: 211 LLCLSALFSGLT-LGLMSLTPQELELVIKSGAIKEQKCAAKILPV 254
>Z68160-1|CAA92294.2| 489|Caenorhabditis elegans Hypothetical
protein D1046.1 protein.
Length = 489
Score = 28.3 bits (60), Expect = 4.6
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Frame = +3
Query: 18 FVGGLSWETSDKELRDHFSAYGEIES--INVKTDPN--TGRSRGFAFIVFKAPDSIDKVM 185
+VG L W T+D +L + G S ++K N G+S+G+A +V + ++ + M
Sbjct: 87 YVGNLLWYTTDADLLKALQSTGLARSQFADMKFFENRTNGQSKGYALLVLNSDAAVKQTM 146
>AF003140-8|AAB54169.1| 396|Caenorhabditis elegans Hypothetical
protein C44E4.4 protein.
Length = 396
Score = 28.3 bits (60), Expect = 4.6
Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +3
Query: 237 KARHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQR-KGFCFITFESEQ 407
K +H +++ G S++ D+I + + FG V M K ++ KG FIT+++ +
Sbjct: 106 KIKHRTVYMKGFSTDTQLDDIIQWANQFGETENVLMRRLKPGDRTFKGSVFITYKTRE 163
>Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical
protein R74.5b protein.
Length = 286
Score = 27.9 bits (59), Expect = 6.1
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = +3
Query: 96 INVKTDPNTGRSRGFAFIVFKAPDSIDKVMAA-GEHTINSKKVDPKKAKAR-HGK 254
++V+ N S+GF F+ + PD D+ A TI ++V+ A R H K
Sbjct: 9 VDVEIIFNERGSKGFGFVTMQNPDDADRARAEFNGTTIEGRRVEVNLATQRVHNK 63
>Z19155-4|CAA79560.3| 844|Caenorhabditis elegans Hypothetical
protein F54G8.5 protein.
Length = 844
Score = 27.5 bits (58), Expect = 8.1
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = -2
Query: 406 CSDSNVMKQNPFLWFFVLSKGISTSIIFPKLL 311
CS N++K PF+ FF + +I LL
Sbjct: 283 CSSLNIVKSQPFIGFFAMFNATMATIASTSLL 314
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,048,681
Number of Sequences: 27780
Number of extensions: 207562
Number of successful extensions: 952
Number of sequences better than 10.0: 126
Number of HSP's better than 10.0 without gapping: 752
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 891
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1342816466
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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