Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0008_L04
         (172 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    19   4.2  
EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle pr...    19   7.3  
D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         18   9.7  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    18   9.7  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    18   9.7  

>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 19.4 bits (38), Expect = 4.2
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = -3

Query: 92  HGPDNDQYAARHD 54
           + P+N    ARHD
Sbjct: 347 YSPENQAVVARHD 359


>EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle
           protein protein.
          Length = 138

 Score = 18.6 bits (36), Expect = 7.3
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = -3

Query: 86  PDNDQYAARHDADQQRHVVSGS 21
           PD  Q +  + AD+    V GS
Sbjct: 80  PDGQQVSITYVADENGFQVQGS 101


>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 18.2 bits (35), Expect = 9.7
 Identities = 5/8 (62%), Positives = 6/8 (75%)
 Frame = -3

Query: 95  CHGPDNDQ 72
           C  PDND+
Sbjct: 416 CENPDNDR 423


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 18.2 bits (35), Expect = 9.7
 Identities = 5/8 (62%), Positives = 6/8 (75%)
 Frame = -3

Query: 95  CHGPDNDQ 72
           C  PDND+
Sbjct: 416 CENPDNDR 423


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 18.2 bits (35), Expect = 9.7
 Identities = 5/8 (62%), Positives = 6/8 (75%)
 Frame = -3

Query: 95  CHGPDNDQ 72
           C  PDND+
Sbjct: 416 CENPDNDR 423


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,495
Number of Sequences: 438
Number of extensions: 223
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 36
effective length of database: 130,575
effective search space used:  2611500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)