Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0008_L01
         (253 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001844-1|AAN71605.1|  148|Drosophila melanogaster RH53228p pro...    35   0.017
AY118810-1|AAM50670.1|  148|Drosophila melanogaster GH22047p pro...    35   0.017
AE014134-324|AAF51319.1|  148|Drosophila melanogaster CG7291-PA ...    35   0.017

>BT001844-1|AAN71605.1|  148|Drosophila melanogaster RH53228p
           protein.
          Length = 148

 Score = 34.7 bits (76), Expect = 0.017
 Identities = 15/44 (34%), Positives = 23/44 (52%)
 Frame = +3

Query: 81  ISIAVLLVGGEAKFYKDCGSQLATVQTVMVTGCSQDAKECVLRK 212
           I+ A L+V   A  + DCGS+      V + GC     EC+L++
Sbjct: 7   IACAALVVFAGALEFSDCGSKTGKFTRVAIEGCDTTKAECILKR 50


>AY118810-1|AAM50670.1|  148|Drosophila melanogaster GH22047p
           protein.
          Length = 148

 Score = 34.7 bits (76), Expect = 0.017
 Identities = 15/44 (34%), Positives = 23/44 (52%)
 Frame = +3

Query: 81  ISIAVLLVGGEAKFYKDCGSQLATVQTVMVTGCSQDAKECVLRK 212
           I+ A L+V   A  + DCGS+      V + GC     EC+L++
Sbjct: 7   IACAALVVFAGALEFSDCGSKTGKFTRVAIEGCDTTKAECILKR 50


>AE014134-324|AAF51319.1|  148|Drosophila melanogaster CG7291-PA
           protein.
          Length = 148

 Score = 34.7 bits (76), Expect = 0.017
 Identities = 15/44 (34%), Positives = 23/44 (52%)
 Frame = +3

Query: 81  ISIAVLLVGGEAKFYKDCGSQLATVQTVMVTGCSQDAKECVLRK 212
           I+ A L+V   A  + DCGS+      V + GC     EC+L++
Sbjct: 7   IACAALVVFAGALEFSDCGSKTGKFTRVAIEGCDTTKAECILKR 50


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,172,088
Number of Sequences: 53049
Number of extensions: 192535
Number of successful extensions: 350
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 349
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 350
length of database: 24,988,368
effective HSP length: 63
effective length of database: 21,646,281
effective search space used: 432925620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)