Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_L01
(253 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92973-6|CAI79258.1| 440|Caenorhabditis elegans Hypothetical pr... 27 1.8
AF000262-9|AAN60529.1| 820|Caenorhabditis elegans Hypothetical ... 27 1.8
Z82264-2|CAB05160.1| 220|Caenorhabditis elegans Hypothetical pr... 26 4.1
Z81564-13|CAB04579.1| 243|Caenorhabditis elegans Hypothetical p... 25 5.4
Z81564-12|CAB04578.1| 263|Caenorhabditis elegans Hypothetical p... 25 5.4
AL032643-9|CAA21664.1| 243|Caenorhabditis elegans Hypothetical ... 25 5.4
AL032643-8|CAA21663.1| 263|Caenorhabditis elegans Hypothetical ... 25 5.4
U50309-1|AAG24137.1| 335|Caenorhabditis elegans Seven tm recept... 25 7.1
Z81115-4|CAB03294.2| 651|Caenorhabditis elegans Hypothetical pr... 25 9.4
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 25 9.4
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 25 9.4
Z75549-1|CAA99917.1| 424|Caenorhabditis elegans Hypothetical pr... 25 9.4
>Z92973-6|CAI79258.1| 440|Caenorhabditis elegans Hypothetical
protein Y6G8.5 protein.
Length = 440
Score = 27.1 bits (57), Expect = 1.8
Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Frame = +3
Query: 6 RRQRASSYHNTSARSPFLI*KMLIFISIAVLLVGGE---AKFYKDCGSQLATVQTVMVTG 176
+R ++N + L +L F SI +L+ G E +F+ CG Q + + TG
Sbjct: 270 KRFNFPKFNNFPSSKMHLFLNILAFASIGLLVNGEEWCMTQFF--CGYQHSVITYPFFTG 327
Query: 177 CSQDAKEC 200
DA EC
Sbjct: 328 KVADADEC 335
>AF000262-9|AAN60529.1| 820|Caenorhabditis elegans Hypothetical
protein C48E7.8 protein.
Length = 820
Score = 27.1 bits (57), Expect = 1.8
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -1
Query: 220 YCFFRSTHSLAS*LHPVTMTVCTVANC 140
YC + T L S PVT VC +NC
Sbjct: 131 YCTLKGTVKLGSETLPVTTGVCLPSNC 157
>Z82264-2|CAB05160.1| 220|Caenorhabditis elegans Hypothetical
protein C49C3.6 protein.
Length = 220
Score = 25.8 bits (54), Expect = 4.1
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = +3
Query: 102 VGGEAKFYKDCGSQLATVQTVMVTGCSQDAKECVLRKKQ 218
V E+KFYK+C A ++ Q KE L K Q
Sbjct: 47 VAEESKFYKNCFETTAAENVELLKSNDQLKKELELLKNQ 85
>Z81564-13|CAB04579.1| 243|Caenorhabditis elegans Hypothetical
protein Y54E5A.8b protein.
Length = 243
Score = 25.4 bits (53), Expect = 5.4
Identities = 7/21 (33%), Positives = 14/21 (66%)
Frame = +1
Query: 91 QYFWSVVKPNFTRIVGRS*PP 153
+++W V+P +R++ S PP
Sbjct: 89 EFYWKAVEPGGSRVISASLPP 109
>Z81564-12|CAB04578.1| 263|Caenorhabditis elegans Hypothetical
protein Y54E5A.8a protein.
Length = 263
Score = 25.4 bits (53), Expect = 5.4
Identities = 7/21 (33%), Positives = 14/21 (66%)
Frame = +1
Query: 91 QYFWSVVKPNFTRIVGRS*PP 153
+++W V+P +R++ S PP
Sbjct: 109 EFYWKAVEPGGSRVISASLPP 129
>AL032643-9|CAA21664.1| 243|Caenorhabditis elegans Hypothetical
protein Y54E5A.8b protein.
Length = 243
Score = 25.4 bits (53), Expect = 5.4
Identities = 7/21 (33%), Positives = 14/21 (66%)
Frame = +1
Query: 91 QYFWSVVKPNFTRIVGRS*PP 153
+++W V+P +R++ S PP
Sbjct: 89 EFYWKAVEPGGSRVISASLPP 109
>AL032643-8|CAA21663.1| 263|Caenorhabditis elegans Hypothetical
protein Y54E5A.8a protein.
Length = 263
Score = 25.4 bits (53), Expect = 5.4
Identities = 7/21 (33%), Positives = 14/21 (66%)
Frame = +1
Query: 91 QYFWSVVKPNFTRIVGRS*PP 153
+++W V+P +R++ S PP
Sbjct: 109 EFYWKAVEPGGSRVISASLPP 129
>U50309-1|AAG24137.1| 335|Caenorhabditis elegans Seven tm receptor
protein 129 protein.
Length = 335
Score = 25.0 bits (52), Expect = 7.1
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -1
Query: 241 FEVHADGYCFFRSTHSLAS*LHPVTMTVC 155
F + DG C FR + L + + V MT+C
Sbjct: 185 FTRNEDGSCLFRFSDLLGATISCVIMTIC 213
>Z81115-4|CAB03294.2| 651|Caenorhabditis elegans Hypothetical
protein T05D4.4 protein.
Length = 651
Score = 24.6 bits (51), Expect = 9.4
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = -2
Query: 132 NPCKIWLHHRPKVLRY 85
N C++W H PK RY
Sbjct: 244 NTCRLWYHGCPKYERY 259
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 24.6 bits (51), Expect = 9.4
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -3
Query: 227 GRLLFLSQHALLSVLTAPGHHD 162
GR F + H + +L APGH D
Sbjct: 239 GRTSFETSHRRIVLLDAPGHKD 260
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 24.6 bits (51), Expect = 9.4
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -3
Query: 227 GRLLFLSQHALLSVLTAPGHHD 162
GR F + H + +L APGH D
Sbjct: 257 GRTSFETSHRRIVLLDAPGHKD 278
>Z75549-1|CAA99917.1| 424|Caenorhabditis elegans Hypothetical
protein T19C4.1 protein.
Length = 424
Score = 24.6 bits (51), Expect = 9.4
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -3
Query: 164 DSLHGG*LRPTILVKFGFTTDQ 99
DS+H G LRP + F + TD+
Sbjct: 76 DSVHSGTLRPPKMSPFVYATDE 97
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,602,396
Number of Sequences: 27780
Number of extensions: 95617
Number of successful extensions: 184
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 184
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 184
length of database: 12,740,198
effective HSP length: 63
effective length of database: 10,990,058
effective search space used: 219801160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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