Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_K24
(663 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L37368-1|AAA92859.1| 305|Homo sapiens RNA-binding protein protein. 39 0.014
BC108316-1|AAI08317.1| 305|Homo sapiens RNA binding protein S1,... 39 0.014
BC001838-1|AAH01838.1| 305|Homo sapiens RNA binding protein S1,... 39 0.014
BC001659-1|AAH01659.1| 305|Homo sapiens RNA binding protein S1,... 39 0.014
AF274003-1|AAL56665.1| 282|Homo sapiens splicing-related factor... 39 0.014
AF247662-1|AAF72519.1| 228|Homo sapiens SR-related protein LD2 ... 39 0.014
AF015608-1|AAC39791.1| 305|Homo sapiens SR protein protein. 39 0.014
AF002163-1|AAC51761.1| 1153|Homo sapiens delta-adaptin protein. 33 1.2
AC005545-3|AAC34212.1| 1121|Homo sapiens delta-adaptin, partial ... 33 1.2
M74002-1|AAA35554.1| 484|Homo sapiens arginine-rich nuclear pro... 31 2.8
BX641004-1|CAE46007.1| 332|Homo sapiens hypothetical protein pr... 31 2.8
BC040436-1|AAH40436.1| 483|Homo sapiens splicing factor, argini... 31 2.8
AL353771-7|CAI22336.1| 424|Homo sapiens splicing factor, argini... 31 2.8
AL353771-6|CAI22335.1| 484|Homo sapiens splicing factor, argini... 31 2.8
AL353771-5|CAI22334.1| 483|Homo sapiens splicing factor, argini... 31 2.8
U80761-1|AAB91452.1| 124|Homo sapiens CTG26 alternate open read... 25 7.3
BC036123-1|AAH36123.1| 467|Homo sapiens stromal membrane-associ... 30 8.5
BC028074-1|AAH28074.1| 440|Homo sapiens stromal membrane-associ... 30 8.5
AY055015-2|AAL14717.1| 440|Homo sapiens stromal membrane-associ... 30 8.5
AY055015-1|AAL14716.1| 467|Homo sapiens stromal membrane-associ... 30 8.5
AY055004-1|AAL14715.1| 440|Homo sapiens stromal membrane-associ... 30 8.5
AY055003-1|AAL14714.1| 467|Homo sapiens stromal membrane-associ... 30 8.5
AL591049-4|CAI14242.1| 440|Homo sapiens stromal membrane-associ... 30 8.5
AL591049-3|CAI14241.1| 467|Homo sapiens stromal membrane-associ... 30 8.5
AL591049-2|CAI14240.1| 436|Homo sapiens stromal membrane-associ... 30 8.5
AL591049-1|CAI14239.1| 124|Homo sapiens stromal membrane-associ... 30 8.5
AL354943-6|CAI12311.1| 440|Homo sapiens stromal membrane-associ... 30 8.5
AL354943-5|CAI12312.1| 467|Homo sapiens stromal membrane-associ... 30 8.5
AL354943-4|CAI12310.1| 436|Homo sapiens stromal membrane-associ... 30 8.5
AL354943-2|CAI12309.1| 124|Homo sapiens stromal membrane-associ... 30 8.5
AL121961-5|CAI42147.1| 440|Homo sapiens stromal membrane-associ... 30 8.5
AL121961-4|CAI42148.1| 467|Homo sapiens stromal membrane-associ... 30 8.5
AL121961-3|CAI42146.1| 436|Homo sapiens stromal membrane-associ... 30 8.5
AL121961-1|CAI42144.1| 124|Homo sapiens stromal membrane-associ... 30 8.5
AK222711-1|BAD96431.1| 440|Homo sapiens stromal membrane-associ... 30 8.5
AK023221-1|BAB14473.1| 437|Homo sapiens protein ( Homo sapiens ... 30 8.5
AF442495-1|AAP97320.1| 440|Homo sapiens putative protein protein. 30 8.5
>L37368-1|AAA92859.1| 305|Homo sapiens RNA-binding protein protein.
Length = 305
Score = 39.1 bits (87), Expect = 0.014
Identities = 15/21 (71%), Positives = 19/21 (90%)
Frame = +3
Query: 522 TRIHIGRLTLNVTRDHVHEIF 584
T++HIGRLT NVT+DH+ EIF
Sbjct: 161 TKVHIGRLTRNVTKDHIMEIF 181
Score = 35.1 bits (77), Expect = 0.23
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = +2
Query: 584 STYGTVKTVEFPMDRLHPLNGRRYAY 661
STYG +K ++ P++R+HP + YAY
Sbjct: 182 STYGKIKMIDMPVERMHPHLSKGYAY 207
>BC108316-1|AAI08317.1| 305|Homo sapiens RNA binding protein S1,
serine-rich domain protein.
Length = 305
Score = 39.1 bits (87), Expect = 0.014
Identities = 15/21 (71%), Positives = 19/21 (90%)
Frame = +3
Query: 522 TRIHIGRLTLNVTRDHVHEIF 584
T++HIGRLT NVT+DH+ EIF
Sbjct: 161 TKVHIGRLTRNVTKDHIMEIF 181
Score = 35.1 bits (77), Expect = 0.23
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = +2
Query: 584 STYGTVKTVEFPMDRLHPLNGRRYAY 661
STYG +K ++ P++R+HP + YAY
Sbjct: 182 STYGKIKMIDMPVERMHPHLSKGYAY 207
>BC001838-1|AAH01838.1| 305|Homo sapiens RNA binding protein S1,
serine-rich domain protein.
Length = 305
Score = 39.1 bits (87), Expect = 0.014
Identities = 15/21 (71%), Positives = 19/21 (90%)
Frame = +3
Query: 522 TRIHIGRLTLNVTRDHVHEIF 584
T++HIGRLT NVT+DH+ EIF
Sbjct: 161 TKVHIGRLTRNVTKDHIMEIF 181
Score = 35.1 bits (77), Expect = 0.23
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = +2
Query: 584 STYGTVKTVEFPMDRLHPLNGRRYAY 661
STYG +K ++ P++R+HP + YAY
Sbjct: 182 STYGKIKMIDMPVERMHPHLSKGYAY 207
>BC001659-1|AAH01659.1| 305|Homo sapiens RNA binding protein S1,
serine-rich domain protein.
Length = 305
Score = 39.1 bits (87), Expect = 0.014
Identities = 15/21 (71%), Positives = 19/21 (90%)
Frame = +3
Query: 522 TRIHIGRLTLNVTRDHVHEIF 584
T++HIGRLT NVT+DH+ EIF
Sbjct: 161 TKVHIGRLTRNVTKDHIMEIF 181
Score = 35.1 bits (77), Expect = 0.23
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = +2
Query: 584 STYGTVKTVEFPMDRLHPLNGRRYAY 661
STYG +K ++ P++R+HP + YAY
Sbjct: 182 STYGKIKMIDMPVERMHPHLSKGYAY 207
>AF274003-1|AAL56665.1| 282|Homo sapiens splicing-related factor
RNPS1 protein.
Length = 282
Score = 39.1 bits (87), Expect = 0.014
Identities = 15/21 (71%), Positives = 19/21 (90%)
Frame = +3
Query: 522 TRIHIGRLTLNVTRDHVHEIF 584
T++HIGRLT NVT+DH+ EIF
Sbjct: 138 TKVHIGRLTRNVTKDHIMEIF 158
Score = 35.1 bits (77), Expect = 0.23
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = +2
Query: 584 STYGTVKTVEFPMDRLHPLNGRRYAY 661
STYG +K ++ P++R+HP + YAY
Sbjct: 159 STYGKIKMIDMPVERMHPHLSKGYAY 184
>AF247662-1|AAF72519.1| 228|Homo sapiens SR-related protein LD2
protein.
Length = 228
Score = 39.1 bits (87), Expect = 0.014
Identities = 15/21 (71%), Positives = 19/21 (90%)
Frame = +3
Query: 522 TRIHIGRLTLNVTRDHVHEIF 584
T++HIGRLT NVT+DH+ EIF
Sbjct: 84 TKVHIGRLTRNVTKDHIMEIF 104
Score = 35.1 bits (77), Expect = 0.23
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = +2
Query: 584 STYGTVKTVEFPMDRLHPLNGRRYAY 661
STYG +K ++ P++R+HP + YAY
Sbjct: 105 STYGKIKMIDMPVERMHPHLSKGYAY 130
>AF015608-1|AAC39791.1| 305|Homo sapiens SR protein protein.
Length = 305
Score = 39.1 bits (87), Expect = 0.014
Identities = 15/21 (71%), Positives = 19/21 (90%)
Frame = +3
Query: 522 TRIHIGRLTLNVTRDHVHEIF 584
T++HIGRLT NVT+DH+ EIF
Sbjct: 161 TKVHIGRLTRNVTKDHIMEIF 181
Score = 35.1 bits (77), Expect = 0.23
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = +2
Query: 584 STYGTVKTVEFPMDRLHPLNGRRYAY 661
STYG +K ++ P++R+HP + YAY
Sbjct: 182 STYGKIKMIDMPVERMHPHLSKGYAY 207
>AF002163-1|AAC51761.1| 1153|Homo sapiens delta-adaptin protein.
Length = 1153
Score = 32.7 bits (71), Expect = 1.2
Identities = 18/49 (36%), Positives = 25/49 (51%)
Frame = +3
Query: 321 RQKKKTSPHKSPLKDKRELDREKIRDRSPLDKKKPVLPSTNDKIKNKDK 467
+ KKK HK +DK E +EK + +SP KKK ++ K K K
Sbjct: 843 KPKKKEKKHKEKERDK-EKKKEKEKKKSPKPKKKKHRKEKEERTKGKKK 890
>AC005545-3|AAC34212.1| 1121|Homo sapiens delta-adaptin, partial CDS
protein.
Length = 1121
Score = 32.7 bits (71), Expect = 1.2
Identities = 18/49 (36%), Positives = 25/49 (51%)
Frame = +3
Query: 321 RQKKKTSPHKSPLKDKRELDREKIRDRSPLDKKKPVLPSTNDKIKNKDK 467
+ KKK HK +DK E +EK + +SP KKK ++ K K K
Sbjct: 811 KPKKKEKKHKEKERDK-EKKKEKEKKKSPKPKKKKHRKEKEERTKGKKK 858
>M74002-1|AAA35554.1| 484|Homo sapiens arginine-rich nuclear
protein protein.
Length = 484
Score = 31.5 bits (68), Expect = 2.8
Identities = 17/48 (35%), Positives = 31/48 (64%)
Frame = +3
Query: 327 KKKTSPHKSPLKDKRELDREKIRDRSPLDKKKPVLPSTNDKIKNKDKQ 470
K+K S SP + K+E ++K ++RS ++++ ST+ K K+KDK+
Sbjct: 362 KRKLSRSPSPRRHKKEKKKDKDKERSRDERER----STSKKKKSKDKE 405
>BX641004-1|CAE46007.1| 332|Homo sapiens hypothetical protein
protein.
Length = 332
Score = 31.5 bits (68), Expect = 2.8
Identities = 17/48 (35%), Positives = 31/48 (64%)
Frame = +3
Query: 327 KKKTSPHKSPLKDKRELDREKIRDRSPLDKKKPVLPSTNDKIKNKDKQ 470
K+K S SP + K+E ++K ++RS ++++ ST+ K K+KDK+
Sbjct: 210 KRKLSRSPSPRRHKKEKKKDKDKERSRDERER----STSKKKKSKDKE 253
>BC040436-1|AAH40436.1| 483|Homo sapiens splicing factor,
arginine/serine-rich 11 protein.
Length = 483
Score = 31.5 bits (68), Expect = 2.8
Identities = 17/48 (35%), Positives = 31/48 (64%)
Frame = +3
Query: 327 KKKTSPHKSPLKDKRELDREKIRDRSPLDKKKPVLPSTNDKIKNKDKQ 470
K+K S SP + K+E ++K ++RS ++++ ST+ K K+KDK+
Sbjct: 362 KRKLSRSPSPRRHKKEKKKDKDKERSRDERER----STSKKKKSKDKE 405
>AL353771-7|CAI22336.1| 424|Homo sapiens splicing factor,
arginine/serine-rich 11 protein.
Length = 424
Score = 31.5 bits (68), Expect = 2.8
Identities = 17/48 (35%), Positives = 31/48 (64%)
Frame = +3
Query: 327 KKKTSPHKSPLKDKRELDREKIRDRSPLDKKKPVLPSTNDKIKNKDKQ 470
K+K S SP + K+E ++K ++RS ++++ ST+ K K+KDK+
Sbjct: 302 KRKLSRSPSPRRHKKEKKKDKDKERSRDERER----STSKKKKSKDKE 345
>AL353771-6|CAI22335.1| 484|Homo sapiens splicing factor,
arginine/serine-rich 11 protein.
Length = 484
Score = 31.5 bits (68), Expect = 2.8
Identities = 17/48 (35%), Positives = 31/48 (64%)
Frame = +3
Query: 327 KKKTSPHKSPLKDKRELDREKIRDRSPLDKKKPVLPSTNDKIKNKDKQ 470
K+K S SP + K+E ++K ++RS ++++ ST+ K K+KDK+
Sbjct: 362 KRKLSRSPSPRRHKKEKKKDKDKERSRDERER----STSKKKKSKDKE 405
>AL353771-5|CAI22334.1| 483|Homo sapiens splicing factor,
arginine/serine-rich 11 protein.
Length = 483
Score = 31.5 bits (68), Expect = 2.8
Identities = 17/48 (35%), Positives = 31/48 (64%)
Frame = +3
Query: 327 KKKTSPHKSPLKDKRELDREKIRDRSPLDKKKPVLPSTNDKIKNKDKQ 470
K+K S SP + K+E ++K ++RS ++++ ST+ K K+KDK+
Sbjct: 362 KRKLSRSPSPRRHKKEKKKDKDKERSRDERER----STSKKKKSKDKE 405
>U80761-1|AAB91452.1| 124|Homo sapiens CTG26 alternate open reading
frame protein.
Length = 124
Score = 25.0 bits (52), Expect(2) = 7.3
Identities = 6/8 (75%), Positives = 6/8 (75%)
Frame = -1
Query: 312 CCCYCYCW 289
CCC C CW
Sbjct: 111 CCCCCCCW 118
Score = 23.8 bits (49), Expect(2) = 7.3
Identities = 11/20 (55%), Positives = 12/20 (60%), Gaps = 5/20 (25%)
Frame = -1
Query: 336 FSSFA-W----NGCCCYCYC 292
FSSF+ W GCCC C C
Sbjct: 89 FSSFSSWLLRGMGCCCCCCC 108
>BC036123-1|AAH36123.1| 467|Homo sapiens stromal
membrane-associated protein 1 protein.
Length = 467
Score = 29.9 bits (64), Expect = 8.5
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +3
Query: 360 KDKRELDREKIRDRSPLDKKKPVLPSTNDKIKNKDKQ 470
K+K + EK R++ P +KP P T +K++ KD+Q
Sbjct: 166 KEKEKKKEEKKREKEP---EKPAKPLTAEKLQKKDQQ 199
>BC028074-1|AAH28074.1| 440|Homo sapiens stromal
membrane-associated protein 1 protein.
Length = 440
Score = 29.9 bits (64), Expect = 8.5
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +3
Query: 360 KDKRELDREKIRDRSPLDKKKPVLPSTNDKIKNKDKQ 470
K+K + EK R++ P +KP P T +K++ KD+Q
Sbjct: 139 KEKEKKKEEKKREKEP---EKPAKPLTAEKLQKKDQQ 172
>AY055015-2|AAL14717.1| 440|Homo sapiens stromal
membrane-associated protein SMAP1B protein.
Length = 440
Score = 29.9 bits (64), Expect = 8.5
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +3
Query: 360 KDKRELDREKIRDRSPLDKKKPVLPSTNDKIKNKDKQ 470
K+K + EK R++ P +KP P T +K++ KD+Q
Sbjct: 139 KEKEKKKEEKKREKEP---EKPAKPLTAEKLQKKDQQ 172
>AY055015-1|AAL14716.1| 467|Homo sapiens stromal
membrane-associated protein SMAP1A protein.
Length = 467
Score = 29.9 bits (64), Expect = 8.5
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +3
Query: 360 KDKRELDREKIRDRSPLDKKKPVLPSTNDKIKNKDKQ 470
K+K + EK R++ P +KP P T +K++ KD+Q
Sbjct: 166 KEKEKKKEEKKREKEP---EKPAKPLTAEKLQKKDQQ 199
>AY055004-1|AAL14715.1| 440|Homo sapiens stromal
membrane-associated protein SMAP1B protein.
Length = 440
Score = 29.9 bits (64), Expect = 8.5
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +3
Query: 360 KDKRELDREKIRDRSPLDKKKPVLPSTNDKIKNKDKQ 470
K+K + EK R++ P +KP P T +K++ KD+Q
Sbjct: 139 KEKEKKKEEKKREKEP---EKPAKPLTAEKLQKKDQQ 172
>AY055003-1|AAL14714.1| 467|Homo sapiens stromal
membrane-associated protein SMAP1A protein.
Length = 467
Score = 29.9 bits (64), Expect = 8.5
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +3
Query: 360 KDKRELDREKIRDRSPLDKKKPVLPSTNDKIKNKDKQ 470
K+K + EK R++ P +KP P T +K++ KD+Q
Sbjct: 166 KEKEKKKEEKKREKEP---EKPAKPLTAEKLQKKDQQ 199
>AL591049-4|CAI14242.1| 440|Homo sapiens stromal
membrane-associated protein 1 protein.
Length = 440
Score = 29.9 bits (64), Expect = 8.5
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +3
Query: 360 KDKRELDREKIRDRSPLDKKKPVLPSTNDKIKNKDKQ 470
K+K + EK R++ P +KP P T +K++ KD+Q
Sbjct: 139 KEKEKKKEEKKREKEP---EKPAKPLTAEKLQKKDQQ 172
>AL591049-3|CAI14241.1| 467|Homo sapiens stromal
membrane-associated protein 1 protein.
Length = 467
Score = 29.9 bits (64), Expect = 8.5
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +3
Query: 360 KDKRELDREKIRDRSPLDKKKPVLPSTNDKIKNKDKQ 470
K+K + EK R++ P +KP P T +K++ KD+Q
Sbjct: 166 KEKEKKKEEKKREKEP---EKPAKPLTAEKLQKKDQQ 199
>AL591049-2|CAI14240.1| 436|Homo sapiens stromal
membrane-associated protein 1 protein.
Length = 436
Score = 29.9 bits (64), Expect = 8.5
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +3
Query: 360 KDKRELDREKIRDRSPLDKKKPVLPSTNDKIKNKDKQ 470
K+K + EK R++ P +KP P T +K++ KD+Q
Sbjct: 139 KEKEKKKEEKKREKEP---EKPAKPLTAEKLQKKDQQ 172
>AL591049-1|CAI14239.1| 124|Homo sapiens stromal
membrane-associated protein 1 protein.
Length = 124
Score = 29.9 bits (64), Expect = 8.5
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +3
Query: 360 KDKRELDREKIRDRSPLDKKKPVLPSTNDKIKNKDKQ 470
K+K + EK R++ P +KP P T +K++ KD+Q
Sbjct: 40 KEKEKKKEEKKREKEP---EKPAKPLTAEKLQKKDQQ 73
>AL354943-6|CAI12311.1| 440|Homo sapiens stromal
membrane-associated protein 1 protein.
Length = 440
Score = 29.9 bits (64), Expect = 8.5
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +3
Query: 360 KDKRELDREKIRDRSPLDKKKPVLPSTNDKIKNKDKQ 470
K+K + EK R++ P +KP P T +K++ KD+Q
Sbjct: 139 KEKEKKKEEKKREKEP---EKPAKPLTAEKLQKKDQQ 172
>AL354943-5|CAI12312.1| 467|Homo sapiens stromal
membrane-associated protein 1 protein.
Length = 467
Score = 29.9 bits (64), Expect = 8.5
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +3
Query: 360 KDKRELDREKIRDRSPLDKKKPVLPSTNDKIKNKDKQ 470
K+K + EK R++ P +KP P T +K++ KD+Q
Sbjct: 166 KEKEKKKEEKKREKEP---EKPAKPLTAEKLQKKDQQ 199
>AL354943-4|CAI12310.1| 436|Homo sapiens stromal
membrane-associated protein 1 protein.
Length = 436
Score = 29.9 bits (64), Expect = 8.5
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +3
Query: 360 KDKRELDREKIRDRSPLDKKKPVLPSTNDKIKNKDKQ 470
K+K + EK R++ P +KP P T +K++ KD+Q
Sbjct: 139 KEKEKKKEEKKREKEP---EKPAKPLTAEKLQKKDQQ 172
>AL354943-2|CAI12309.1| 124|Homo sapiens stromal
membrane-associated protein 1 protein.
Length = 124
Score = 29.9 bits (64), Expect = 8.5
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +3
Query: 360 KDKRELDREKIRDRSPLDKKKPVLPSTNDKIKNKDKQ 470
K+K + EK R++ P +KP P T +K++ KD+Q
Sbjct: 40 KEKEKKKEEKKREKEP---EKPAKPLTAEKLQKKDQQ 73
>AL121961-5|CAI42147.1| 440|Homo sapiens stromal
membrane-associated protein 1 protein.
Length = 440
Score = 29.9 bits (64), Expect = 8.5
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +3
Query: 360 KDKRELDREKIRDRSPLDKKKPVLPSTNDKIKNKDKQ 470
K+K + EK R++ P +KP P T +K++ KD+Q
Sbjct: 139 KEKEKKKEEKKREKEP---EKPAKPLTAEKLQKKDQQ 172
>AL121961-4|CAI42148.1| 467|Homo sapiens stromal
membrane-associated protein 1 protein.
Length = 467
Score = 29.9 bits (64), Expect = 8.5
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +3
Query: 360 KDKRELDREKIRDRSPLDKKKPVLPSTNDKIKNKDKQ 470
K+K + EK R++ P +KP P T +K++ KD+Q
Sbjct: 166 KEKEKKKEEKKREKEP---EKPAKPLTAEKLQKKDQQ 199
>AL121961-3|CAI42146.1| 436|Homo sapiens stromal
membrane-associated protein 1 protein.
Length = 436
Score = 29.9 bits (64), Expect = 8.5
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +3
Query: 360 KDKRELDREKIRDRSPLDKKKPVLPSTNDKIKNKDKQ 470
K+K + EK R++ P +KP P T +K++ KD+Q
Sbjct: 139 KEKEKKKEEKKREKEP---EKPAKPLTAEKLQKKDQQ 172
>AL121961-1|CAI42144.1| 124|Homo sapiens stromal
membrane-associated protein 1 protein.
Length = 124
Score = 29.9 bits (64), Expect = 8.5
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +3
Query: 360 KDKRELDREKIRDRSPLDKKKPVLPSTNDKIKNKDKQ 470
K+K + EK R++ P +KP P T +K++ KD+Q
Sbjct: 40 KEKEKKKEEKKREKEP---EKPAKPLTAEKLQKKDQQ 73
>AK222711-1|BAD96431.1| 440|Homo sapiens stromal
membrane-associated protein variant protein.
Length = 440
Score = 29.9 bits (64), Expect = 8.5
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +3
Query: 360 KDKRELDREKIRDRSPLDKKKPVLPSTNDKIKNKDKQ 470
K+K + EK R++ P +KP P T +K++ KD+Q
Sbjct: 139 KEKEKKKEEKKREKEP---EKPAKPLTAEKLQKKDQQ 172
>AK023221-1|BAB14473.1| 437|Homo sapiens protein ( Homo sapiens
cDNA FLJ13159 fis, clone NT2RP3003555, weakly similar to
HYPOTHETICAL 32.6 KD PROTEIN IN MET30-PIG2 INTERGENIC
REGION. ).
Length = 437
Score = 29.9 bits (64), Expect = 8.5
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +3
Query: 360 KDKRELDREKIRDRSPLDKKKPVLPSTNDKIKNKDKQ 470
K+K + EK R++ P +KP P T +K++ KD+Q
Sbjct: 139 KEKEKKKEEKKREKEP---EKPAKPLTAEKLQKKDQQ 172
>AF442495-1|AAP97320.1| 440|Homo sapiens putative protein protein.
Length = 440
Score = 29.9 bits (64), Expect = 8.5
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +3
Query: 360 KDKRELDREKIRDRSPLDKKKPVLPSTNDKIKNKDKQ 470
K+K + EK R++ P +KP P T +K++ KD+Q
Sbjct: 139 KEKEKKKEEKKREKEP---EKPAKPLTAEKLQKKDQQ 172
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,924,420
Number of Sequences: 237096
Number of extensions: 1121583
Number of successful extensions: 3527
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 2993
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3430
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7478817430
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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