Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_K24
(663 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY118927-1|AAM50787.1| 374|Drosophila melanogaster LD23870p pro... 39 0.005
AJ459409-1|CAD30680.1| 374|Drosophila melanogaster RNA-binding ... 39 0.005
AE014297-964|AAF54396.2| 374|Drosophila melanogaster CG16788-PA... 39 0.005
AE014298-2165|AAN09356.1| 426|Drosophila melanogaster CG6340-PD... 30 3.2
BT029153-1|ABJ17088.1| 708|Drosophila melanogaster SD01194p pro... 29 4.3
BT028873-1|ABI34254.1| 708|Drosophila melanogaster SD20656p pro... 29 4.3
AY128500-1|AAM75093.1| 513|Drosophila melanogaster RH70372p pro... 29 4.3
AY051612-1|AAK93036.1| 513|Drosophila melanogaster GH25653p pro... 29 4.3
AE014298-2162|AAF48464.1| 513|Drosophila melanogaster CG6340-PB... 29 4.3
AY061188-1|AAL28736.1| 321|Drosophila melanogaster LD15209p pro... 29 5.6
AE014298-898|AAF46166.1| 321|Drosophila melanogaster CG3918-PA ... 29 5.6
AE014297-422|AAN13235.1| 741|Drosophila melanogaster CG15593-PB... 29 5.6
>AY118927-1|AAM50787.1| 374|Drosophila melanogaster LD23870p
protein.
Length = 374
Score = 39.1 bits (87), Expect = 0.005
Identities = 16/20 (80%), Positives = 18/20 (90%)
Frame = +3
Query: 525 RIHIGRLTLNVTRDHVHEIF 584
RIH+GRLT NVT+DHV EIF
Sbjct: 220 RIHVGRLTRNVTKDHVFEIF 239
Score = 36.3 bits (80), Expect = 0.037
Identities = 15/26 (57%), Positives = 19/26 (73%)
Frame = +2
Query: 584 STYGTVKTVEFPMDRLHPLNGRRYAY 661
S++G VK VEFP+DR HP GR A+
Sbjct: 240 SSFGDVKNVEFPVDRFHPNFGRGVAF 265
>AJ459409-1|CAD30680.1| 374|Drosophila melanogaster RNA-binding
protein S1 protein.
Length = 374
Score = 39.1 bits (87), Expect = 0.005
Identities = 16/20 (80%), Positives = 18/20 (90%)
Frame = +3
Query: 525 RIHIGRLTLNVTRDHVHEIF 584
RIH+GRLT NVT+DHV EIF
Sbjct: 220 RIHVGRLTRNVTKDHVFEIF 239
Score = 36.3 bits (80), Expect = 0.037
Identities = 15/26 (57%), Positives = 19/26 (73%)
Frame = +2
Query: 584 STYGTVKTVEFPMDRLHPLNGRRYAY 661
S++G VK VEFP+DR HP GR A+
Sbjct: 240 SSFGDVKNVEFPVDRFHPNFGRGVAF 265
>AE014297-964|AAF54396.2| 374|Drosophila melanogaster CG16788-PA
protein.
Length = 374
Score = 39.1 bits (87), Expect = 0.005
Identities = 16/20 (80%), Positives = 18/20 (90%)
Frame = +3
Query: 525 RIHIGRLTLNVTRDHVHEIF 584
RIH+GRLT NVT+DHV EIF
Sbjct: 220 RIHVGRLTRNVTKDHVFEIF 239
Score = 36.3 bits (80), Expect = 0.037
Identities = 15/26 (57%), Positives = 19/26 (73%)
Frame = +2
Query: 584 STYGTVKTVEFPMDRLHPLNGRRYAY 661
S++G VK VEFP+DR HP GR A+
Sbjct: 240 SSFGDVKNVEFPVDRFHPNFGRGVAF 265
>AE014298-2165|AAN09356.1| 426|Drosophila melanogaster CG6340-PD,
isoform D protein.
Length = 426
Score = 29.9 bits (64), Expect = 3.2
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +3
Query: 321 RQKKKTSPHKSPLKDKRELDREKIRDRSPLDKKKPVLPSTNDKIKNKD 464
++ K +S H+ RE DR++ RDR DKK+ + DK ++K+
Sbjct: 8 QEPKPSSRHRQERDKDRERDRDRERDRDK-DKKRSDSERSRDKGRDKN 54
>BT029153-1|ABJ17088.1| 708|Drosophila melanogaster SD01194p
protein.
Length = 708
Score = 29.5 bits (63), Expect = 4.3
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +2
Query: 590 YGTVKTVEFPMDRLHPLNGRRYAY 661
+G + V+FPMDR GR YA+
Sbjct: 558 FGALTAVDFPMDRFQGRQGRGYAF 581
>BT028873-1|ABI34254.1| 708|Drosophila melanogaster SD20656p
protein.
Length = 708
Score = 29.5 bits (63), Expect = 4.3
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +2
Query: 590 YGTVKTVEFPMDRLHPLNGRRYAY 661
+G + V+FPMDR GR YA+
Sbjct: 558 FGALTAVDFPMDRFQGRQGRGYAF 581
>AY128500-1|AAM75093.1| 513|Drosophila melanogaster RH70372p
protein.
Length = 513
Score = 29.5 bits (63), Expect = 4.3
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = +3
Query: 324 QKKKTSPHKSPLKDKRELDREKIRDRSPLDKKKPVLPSTNDKIKNKD 464
+ K +S H+ RE DR++ RDR DKK+ + DK ++K+
Sbjct: 96 EPKPSSRHRQERDKDRERDRDRERDRDK-DKKRSDSERSRDKGRDKN 141
>AY051612-1|AAK93036.1| 513|Drosophila melanogaster GH25653p
protein.
Length = 513
Score = 29.5 bits (63), Expect = 4.3
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = +3
Query: 324 QKKKTSPHKSPLKDKRELDREKIRDRSPLDKKKPVLPSTNDKIKNKD 464
+ K +S H+ RE DR++ RDR DKK+ + DK ++K+
Sbjct: 96 EPKPSSRHRQERDKDRERDRDRERDRDK-DKKRSDSERSRDKGRDKN 141
>AE014298-2162|AAF48464.1| 513|Drosophila melanogaster CG6340-PB,
isoform B protein.
Length = 513
Score = 29.5 bits (63), Expect = 4.3
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = +3
Query: 324 QKKKTSPHKSPLKDKRELDREKIRDRSPLDKKKPVLPSTNDKIKNKD 464
+ K +S H+ RE DR++ RDR DKK+ + DK ++K+
Sbjct: 96 EPKPSSRHRQERDKDRERDRDRERDRDK-DKKRSDSERSRDKGRDKN 141
>AY061188-1|AAL28736.1| 321|Drosophila melanogaster LD15209p
protein.
Length = 321
Score = 29.1 bits (62), Expect = 5.6
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +3
Query: 336 TSPHKSPLKDKRELDREKIRDRSPLDKKKPVLPSTNDKIKNKDKQ 470
T P P KR+ ++K RDR L KK +K+K K+K+
Sbjct: 79 TEPAVLPAAGKRDRSKDKSRDR--LKAKKREREREREKVKEKEKE 121
>AE014298-898|AAF46166.1| 321|Drosophila melanogaster CG3918-PA
protein.
Length = 321
Score = 29.1 bits (62), Expect = 5.6
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +3
Query: 336 TSPHKSPLKDKRELDREKIRDRSPLDKKKPVLPSTNDKIKNKDKQ 470
T P P KR+ ++K RDR L KK +K+K K+K+
Sbjct: 79 TEPAVLPAAGKRDRSKDKSRDR--LKAKKREREREREKVKEKEKE 121
>AE014297-422|AAN13235.1| 741|Drosophila melanogaster CG15593-PB,
isoform B protein.
Length = 741
Score = 29.1 bits (62), Expect = 5.6
Identities = 18/49 (36%), Positives = 26/49 (53%)
Frame = +3
Query: 321 RQKKKTSPHKSPLKDKRELDREKIRDRSPLDKKKPVLPSTNDKIKNKDK 467
++KKK S K P K K+ ++K +D+ K K T K K+KDK
Sbjct: 559 KKKKKKSKKKKPKKQKKSKKKKK-KDKYK-KKNKKCSKKTGRKKKDKDK 605
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,312,201
Number of Sequences: 53049
Number of extensions: 348025
Number of successful extensions: 1342
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1141
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1318
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2848092300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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