Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_K22
(639 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 372 e-104
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 372 e-104
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 372 e-104
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 372 e-104
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 372 e-104
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 372 e-104
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 372 e-103
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 370 e-103
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 364 e-101
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 339 8e-94
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 285 2e-77
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 229 1e-60
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 186 9e-48
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 181 4e-46
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 181 4e-46
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 180 1e-45
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 174 5e-44
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 153 1e-37
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 116 1e-26
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 58 7e-09
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 58 7e-09
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 51 8e-07
AF003386-14|AAK82896.1| 811|Caenorhabditis elegans Hypothetical... 34 0.099
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 32 0.30
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 32 0.40
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 31 0.53
U97193-7|AAK68163.1| 299|Caenorhabditis elegans Yeast sir relat... 31 0.70
U42439-7|AAA83511.1| 304|Caenorhabditis elegans Collagen protei... 30 1.6
AL117203-2|CAB55104.1| 321|Caenorhabditis elegans Hypothetical ... 30 1.6
Z79605-1|CAB01904.1| 719|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z29967-2|CAA82855.1| 722|Caenorhabditis elegans lin-15A protein. 29 2.8
U10413-2|AAA20090.1| 719|Caenorhabditis elegans lin-15A protein... 29 2.8
U10411-1|AAA20087.1| 719|Caenorhabditis elegans lin-15A protein... 29 2.8
AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical ... 28 4.9
Z81102-6|CAB03207.2| 571|Caenorhabditis elegans Hypothetical pr... 28 6.5
Z81102-4|CAB03204.2| 639|Caenorhabditis elegans Hypothetical pr... 28 6.5
Z69659-7|CAA93488.2| 571|Caenorhabditis elegans Hypothetical pr... 28 6.5
Z69659-6|CAA93486.2| 639|Caenorhabditis elegans Hypothetical pr... 28 6.5
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 28 6.5
Z66495-4|CAA91271.1| 954|Caenorhabditis elegans Hypothetical pr... 27 8.6
AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical... 27 8.6
AC024808-1|AAK29927.1| 309|Caenorhabditis elegans Hypothetical ... 27 8.6
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 372 bits (916), Expect = e-104
Identities = 173/177 (97%), Positives = 176/177 (99%)
Frame = +1
Query: 109 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 288
D+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 3 DDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 62
Query: 289 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 468
RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 63 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 122
Query: 469 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPDAILRL 639
IMFETFNTPAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALP AILRL
Sbjct: 123 IMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRL 179
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 372 bits (916), Expect = e-104
Identities = 173/177 (97%), Positives = 176/177 (99%)
Frame = +1
Query: 109 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 288
D+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 3 DDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 62
Query: 289 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 468
RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 63 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 122
Query: 469 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPDAILRL 639
IMFETFNTPAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALP AILRL
Sbjct: 123 IMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRL 179
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 372 bits (916), Expect = e-104
Identities = 173/177 (97%), Positives = 176/177 (99%)
Frame = +1
Query: 109 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 288
D+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 3 DDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 62
Query: 289 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 468
RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 63 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 122
Query: 469 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPDAILRL 639
IMFETFNTPAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALP AILRL
Sbjct: 123 IMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRL 179
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 372 bits (916), Expect = e-104
Identities = 173/177 (97%), Positives = 176/177 (99%)
Frame = +1
Query: 109 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 288
D+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 3 DDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 62
Query: 289 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 468
RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 63 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 122
Query: 469 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPDAILRL 639
IMFETFNTPAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALP AILRL
Sbjct: 123 IMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRL 179
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 372 bits (916), Expect = e-104
Identities = 173/177 (97%), Positives = 176/177 (99%)
Frame = +1
Query: 109 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 288
D+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 3 DDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 62
Query: 289 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 468
RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 63 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 122
Query: 469 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPDAILRL 639
IMFETFNTPAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALP AILRL
Sbjct: 123 IMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRL 179
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 372 bits (916), Expect = e-104
Identities = 173/177 (97%), Positives = 176/177 (99%)
Frame = +1
Query: 109 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 288
D+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 3 DDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 62
Query: 289 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 468
RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 63 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 122
Query: 469 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPDAILRL 639
IMFETFNTPAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALP AILRL
Sbjct: 123 IMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRL 179
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 372 bits (914), Expect = e-103
Identities = 173/177 (97%), Positives = 176/177 (99%)
Frame = +1
Query: 109 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 288
D++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 3 DDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 62
Query: 289 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 468
RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 63 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 122
Query: 469 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPDAILRL 639
IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGV+HTVPIYEGYALP AILRL
Sbjct: 123 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRL 179
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 370 bits (910), Expect = e-103
Identities = 171/177 (96%), Positives = 176/177 (99%)
Frame = +1
Query: 109 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 288
D++VAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 3 DDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 62
Query: 289 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 468
RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 63 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 122
Query: 469 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPDAILRL 639
IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGV+HTVPIYEGYALP AILRL
Sbjct: 123 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRL 179
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 364 bits (896), Expect = e-101
Identities = 168/177 (94%), Positives = 174/177 (98%)
Frame = +1
Query: 109 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 288
+EE+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 289 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 468
RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPK+NREKMTQ
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKSNREKMTQ 121
Query: 469 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPDAILRL 639
IMFETFNTPAMYV IQAVLSLYASGRTTGIVLD+GDGV+HTVPIYEGYALP AI RL
Sbjct: 122 IMFETFNTPAMYVNIQAVLSLYASGRTTGIVLDTGDGVTHTVPIYEGYALPHAIQRL 178
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 339 bits (834), Expect = 8e-94
Identities = 157/161 (97%), Positives = 160/161 (99%)
Frame = +1
Query: 157 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 336
+AGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 64
Query: 337 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 516
NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ
Sbjct: 65 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 124
Query: 517 AVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPDAILRL 639
AVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALP AILRL
Sbjct: 125 AVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRL 165
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 285 bits (699), Expect = 2e-77
Identities = 132/135 (97%), Positives = 134/135 (99%)
Frame = +1
Query: 235 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 414
MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV
Sbjct: 1 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 60
Query: 415 LLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV 594
LLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTV
Sbjct: 61 LLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTV 120
Query: 595 PIYEGYALPDAILRL 639
PIYEGYALP AILRL
Sbjct: 121 PIYEGYALPHAILRL 135
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 229 bits (560), Expect = 1e-60
Identities = 100/172 (58%), Positives = 135/172 (78%), Gaps = 1/172 (0%)
Frame = +1
Query: 127 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 306
+V+DNGSG+ KAGFAG+ P+ F + VGRP++ VM G D ++G +A+S RG+ ++
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAGGLDGDIFIGPKAESNRGLFSI 70
Query: 307 KYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 483
+YP+EHGIV NW DMEKIW + F ++L++ PEEHPVLLT+APLNP NRE+ +I FET
Sbjct: 71 EYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAPLNPLKNRERSAEIFFET 130
Query: 484 FNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPDAILRL 639
FN PA+Y+ +QAVLSLYA+GRTTG+VLDSGDGV+H VPI +G+A+ AI R+
Sbjct: 131 FNVPALYIQMQAVLSLYATGRTTGVVLDSGDGVTHAVPIVKGFAMKHAIQRM 182
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 186 bits (454), Expect = 9e-48
Identities = 91/174 (52%), Positives = 121/174 (69%), Gaps = 3/174 (1%)
Frame = +1
Query: 127 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM-VGMGQ-KDSYVGDEAQSKRGIL 300
+VVDNG+G K G+AG + P +FPS+VGRP + VG + KD VG+E R +L
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEECSQLRQML 68
Query: 301 TLKYPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANREKMTQIMF 477
+ YP+++GIV NWDDM +W HTF E L + P+E +LLTE PLNP +NREKM Q+MF
Sbjct: 69 DINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLLLTEPPLNPNSNREKMFQVMF 128
Query: 478 ETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPDAILRL 639
E + ++YVA+QAVL+LYA G TG+V+DSGDGV+H P+YEG+AL RL
Sbjct: 129 EQYGFNSIYVAVQAVLTLYAQGLLTGVVVDSGDGVTHICPVYEGFALHHLTRRL 182
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 181 bits (440), Expect = 4e-46
Identities = 83/84 (98%), Positives = 84/84 (100%)
Frame = +1
Query: 109 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 288
D+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 3 DDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 62
Query: 289 RGILTLKYPIEHGIVTNWDDMEKI 360
RGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 63 RGILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 181 bits (440), Expect = 4e-46
Identities = 83/84 (98%), Positives = 84/84 (100%)
Frame = +1
Query: 109 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 288
D+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 3 DDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 62
Query: 289 RGILTLKYPIEHGIVTNWDDMEKI 360
RGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 63 RGILTLKYPIEHGIVTNWDDMEKI 86
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 180 bits (437), Expect = 1e-45
Identities = 82/84 (97%), Positives = 84/84 (100%)
Frame = +1
Query: 109 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 288
D++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 3 DDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 62
Query: 289 RGILTLKYPIEHGIVTNWDDMEKI 360
RGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 63 RGILTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 174 bits (423), Expect = 5e-44
Identities = 79/81 (97%), Positives = 81/81 (100%)
Frame = +1
Query: 109 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 288
D++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 3 DDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 62
Query: 289 RGILTLKYPIEHGIVTNWDDM 351
RGILTLKYPIEHGIVTNWDDM
Sbjct: 63 RGILTLKYPIEHGIVTNWDDM 83
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 153 bits (370), Expect = 1e-37
Identities = 82/193 (42%), Positives = 112/193 (58%), Gaps = 21/193 (10%)
Frame = +1
Query: 115 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSI------VGRPRHQG------VMVGMGQKD 258
++ A V+DNG+G K G+AG+ P+ + PS V Q V G+ D
Sbjct: 5 QLPACVIDNGTGYTKLGYAGNTEPQFIIPSAIAVKDKVASSNSQAMRWNNRVGAGIDDLD 64
Query: 259 SYVGDEAQSKRGI-LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 435
++GDEA S T+KYPI HGIV +WD ME+ W + LR PE+H LLTE PL
Sbjct: 65 FFIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLTEPPL 124
Query: 436 NPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSHT 591
N NRE +IMFE+FN P +Y+A+QAVL+L AS + TG+V+DSGDGV+H
Sbjct: 125 NTPENREYTAEIMFESFNVPGLYIAVQAVLALTASWNSREANERSLTGLVIDSGDGVTHC 184
Query: 592 VPIYEGYALPDAI 630
+P+ +GY + I
Sbjct: 185 IPVADGYVIGSCI 197
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 116 bits (280), Expect = 1e-26
Identities = 68/192 (35%), Positives = 106/192 (55%), Gaps = 17/192 (8%)
Frame = +1
Query: 112 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA--QS 285
+EV+ LV D GS + GFAG++ P+ PS + Q+ GD + Q+
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYIAVQEALPDDTIEKQEAMEEGDNSKVQT 68
Query: 286 KR------GILTLKYP---------IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 420
KR G + P ++ G++ +W+ EKI H++ N L P EHPVL
Sbjct: 69 KREKNFFIGTTKIIVPRARTNMESFMKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLF 128
Query: 421 TEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPI 600
+E+ N +A REK+T+IMFE F PA Y++ VLS +A GRT G+++DSG + VP+
Sbjct: 129 SESSWNDRARREKLTEIMFEKFQVPAYYLSKNVVLSCFAQGRTHGLMVDSGATQTSVVPV 188
Query: 601 YEGYALPDAILR 636
++GYA+ A+++
Sbjct: 189 FDGYAVTHAVVK 200
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 57.6 bits (133), Expect = 7e-09
Identities = 43/178 (24%), Positives = 79/178 (44%), Gaps = 4/178 (2%)
Frame = +1
Query: 118 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 297
+ ++ DNG K G ++PR V SIV + +H+ V + + +E K +
Sbjct: 3 LTTIIFDNGGHNMKIGTIDSESPRLVPNSIV-KAKHEKKRVFVAHEQ----EECSDKFSL 57
Query: 298 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 477
++ PIE G V NWD ++IW TF + V + LT+ A + ++I+F
Sbjct: 58 FYVR-PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILF 115
Query: 478 ETFNTPAMYVAIQAVLSLYASGRTT----GIVLDSGDGVSHTVPIYEGYALPDAILRL 639
+ F ++ + L S + +V+DSG + G + D+++R+
Sbjct: 116 DYFGFTEVHKTSASTLVAKHSNKINNEKCAVVVDSGFSWTTVASFVNGMLIQDSVIRI 173
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 57.6 bits (133), Expect = 7e-09
Identities = 43/178 (24%), Positives = 79/178 (44%), Gaps = 4/178 (2%)
Frame = +1
Query: 118 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 297
+ ++ DNG K G ++PR V SIV + +H+ V + + +E K +
Sbjct: 3 LTTIIFDNGGHNMKIGTIDSESPRLVPNSIV-KAKHEKKRVFVAHEQ----EECSDKFSL 57
Query: 298 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 477
++ PIE G V NWD ++IW TF + V + LT+ A + ++I+F
Sbjct: 58 FYVR-PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILF 115
Query: 478 ETFNTPAMYVAIQAVLSLYASGRTT----GIVLDSGDGVSHTVPIYEGYALPDAILRL 639
+ F ++ + L S + +V+DSG + G + D+++R+
Sbjct: 116 DYFGFTEVHKTSASTLVAKHSNKINNEKCAVVVDSGFSWTTVASFVNGMLIQDSVIRI 173
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 50.8 bits (116), Expect = 8e-07
Identities = 46/170 (27%), Positives = 74/170 (43%), Gaps = 2/170 (1%)
Frame = +1
Query: 127 LVVDNGSGMCKAGFAGDDA--PRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 300
L+++ GS +AG + P++ FP+I R + VG + R I
Sbjct: 181 LILELGSCSIRAGVLTTEPSLPQSFFPAIAVRTDDGKIFVGEDAYRPEIRHNGDFVRPIS 240
Query: 301 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 480
+E + D+ K EL+V P ++ VLL+ P ++ QI E
Sbjct: 241 ATDPSVERYSIDK--DVLKAVIGKVTKELKVEPWKYKVLLSIPQNIPTVLIGELLQICLE 298
Query: 481 TFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPDAI 630
+ + Q L LYA TTG+V+D G+ V + VP+ +GY + AI
Sbjct: 299 DIKFQSAGITRQPSLILYAYDVTTGVVVDIGERV-NIVPVIDGYVVESAI 347
>AF003386-14|AAK82896.1| 811|Caenorhabditis elegans Hypothetical
protein F59E12.1 protein.
Length = 811
Score = 33.9 bits (74), Expect = 0.099
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = -2
Query: 248 PMPTMTPW*RGRPTIEGNTARGASSPAKPALHIPDPL 138
P T TP RGRP I + ++ P P PDPL
Sbjct: 336 PPATQTPRSRGRPRIHSSASKKTEKPETPRAESPDPL 372
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 32.3 bits (70), Expect = 0.30
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -2
Query: 581 TPSPESSTIPVVRPDAYSESTAWIATYMAGVL 486
TP P SST+PVV P ++ T +Y+A L
Sbjct: 865 TPQPLSSTMPVVAPSTSTQPTPTTGSYLANTL 896
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 31.9 bits (69), Expect = 0.40
Identities = 19/59 (32%), Positives = 23/59 (38%), Gaps = 2/59 (3%)
Frame = +2
Query: 383 SCV*LPRSTQSCSPKLPSTPKPTERR*HRLCSRPSTHPP--CT*LSRPCSHCTRPVVPP 553
+C PR + SC P +P P P C PS P C P + C P PP
Sbjct: 69 NCCGAPRPSPSCCPYVPPAPLPPPPPPASPCCGPSPVPAPCCPPPPAPAAPCCPPPPPP 127
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 31.5 bits (68), Expect = 0.53
Identities = 19/65 (29%), Positives = 28/65 (43%)
Frame = +2
Query: 404 STQSCSPKLPSTPKPTERR*HRLCSRPSTHPPCT*LSRPCSHCTRPVVPPVSCWIPAMVY 583
+++S SP P P P L P PP +S+ + PV PP + P+M+
Sbjct: 1330 TSRSSSPSPPPPPPPPPPPSDDLTPVPPPPPPPPTMSKAPTGVPLPVPPPPPLFSPSMIL 1389
Query: 584 PTQYP 598
P P
Sbjct: 1390 PPPPP 1394
>U97193-7|AAK68163.1| 299|Caenorhabditis elegans Yeast sir related
protein 2.4 protein.
Length = 299
Score = 31.1 bits (67), Expect = 0.70
Identities = 31/114 (27%), Positives = 49/114 (42%), Gaps = 3/114 (2%)
Frame = +1
Query: 268 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 447
G + K TL + E + + D + K W T + L + + + PL+ K+
Sbjct: 183 GRSCRGKLRDATLDWDTEISL-NHLDRIRKAWKQTSHL-LCIGTSLEIIPMGSLPLDAKS 240
Query: 448 NREKMTQIMF-ETFNTPAMYVAIQA--VLSLYASGRTTGIVLDSGDGVSHTVPI 600
K T I + ET + + AI A L LY+ G+ +D GD + VPI
Sbjct: 241 KGIKTTTINYQETAHEKIVETAIHADVKLILYSLCNALGVNVDLGDDLPDEVPI 294
>U42439-7|AAA83511.1| 304|Caenorhabditis elegans Collagen protein
110 protein.
Length = 304
Score = 29.9 bits (64), Expect = 1.6
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +3
Query: 210 GATSSPGRHGRHGSEG 257
G + +PGRHGRHG+ G
Sbjct: 109 GPSGTPGRHGRHGAPG 124
>AL117203-2|CAB55104.1| 321|Caenorhabditis elegans Hypothetical
protein Y48C3A.3 protein.
Length = 321
Score = 29.9 bits (64), Expect = 1.6
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +2
Query: 533 TRPVVPPVS-CWIPAMVYPTQYPSTRVTPYRTPSCV 637
TRP P++ W P +VY Q+P R+ P +P C+
Sbjct: 43 TRPRKSPLNENWKPDVVYLYQFPRARLLPNLSPFCM 78
>Z79605-1|CAB01904.1| 719|Caenorhabditis elegans Hypothetical
protein ZK678.1 protein.
Length = 719
Score = 29.1 bits (62), Expect = 2.8
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +2
Query: 401 RSTQSCSPKLPSTPKPTERR*HRLCSRPSTHPPCT*LSRPCSHCTRPVV 547
+S+ PS P P++ R R S+PS + CT L+ PC C + ++
Sbjct: 173 KSSAEIFSHFPSEPSPSKPRATREGSQPSDYTYCTYLT-PCILCEKALL 220
>Z29967-2|CAA82855.1| 722|Caenorhabditis elegans lin-15A protein.
Length = 722
Score = 29.1 bits (62), Expect = 2.8
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +2
Query: 401 RSTQSCSPKLPSTPKPTERR*HRLCSRPSTHPPCT*LSRPCSHCTRPVV 547
+S+ PS P P++ R R S+PS + CT L+ PC C + ++
Sbjct: 173 KSSAEIFSHFPSEPSPSKPRATREGSQPSDYTYCTYLT-PCILCEKALL 220
>U10413-2|AAA20090.1| 719|Caenorhabditis elegans lin-15A protein
protein.
Length = 719
Score = 29.1 bits (62), Expect = 2.8
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +2
Query: 401 RSTQSCSPKLPSTPKPTERR*HRLCSRPSTHPPCT*LSRPCSHCTRPVV 547
+S+ PS P P++ R R S+PS + CT L+ PC C + ++
Sbjct: 173 KSSAEIFSHFPSEPSPSKPRATREGSQPSDYTYCTYLT-PCILCEKALL 220
>U10411-1|AAA20087.1| 719|Caenorhabditis elegans lin-15A protein
protein.
Length = 719
Score = 29.1 bits (62), Expect = 2.8
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +2
Query: 401 RSTQSCSPKLPSTPKPTERR*HRLCSRPSTHPPCT*LSRPCSHCTRPVV 547
+S+ PS P P++ R R S+PS + CT L+ PC C + ++
Sbjct: 173 KSSAEIFSHFPSEPSPSKPRATREGSQPSDYTYCTYLT-PCILCEKALL 220
>AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical
protein W03G1.5 protein.
Length = 471
Score = 28.3 bits (60), Expect = 4.9
Identities = 20/51 (39%), Positives = 21/51 (41%), Gaps = 5/51 (9%)
Frame = +3
Query: 210 GATSSPGRHGRHGSEGLLRR**G-TEQEGYPHTQIPH----RTRHRHQLGR 347
G PGRHGRHGS R G + G PH H H H GR
Sbjct: 358 GPPHCPGRHGRHGSRSHSPRGHGHGGRHGPPHCPGRHGHHGPPHHHHHDGR 408
>Z81102-6|CAB03207.2| 571|Caenorhabditis elegans Hypothetical
protein F07C6.4c protein.
Length = 571
Score = 27.9 bits (59), Expect = 6.5
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +2
Query: 398 PRSTQSCSPKLPSTPKPTE 454
P STQ+ P+LP P+P E
Sbjct: 21 PMSTQTSEPQLPDVPEPNE 39
>Z81102-4|CAB03204.2| 639|Caenorhabditis elegans Hypothetical
protein F07C6.4b protein.
Length = 639
Score = 27.9 bits (59), Expect = 6.5
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +2
Query: 398 PRSTQSCSPKLPSTPKPTE 454
P STQ+ P+LP P+P E
Sbjct: 89 PMSTQTSEPQLPDVPEPNE 107
>Z69659-7|CAA93488.2| 571|Caenorhabditis elegans Hypothetical
protein F07C6.4c protein.
Length = 571
Score = 27.9 bits (59), Expect = 6.5
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +2
Query: 398 PRSTQSCSPKLPSTPKPTE 454
P STQ+ P+LP P+P E
Sbjct: 21 PMSTQTSEPQLPDVPEPNE 39
>Z69659-6|CAA93486.2| 639|Caenorhabditis elegans Hypothetical
protein F07C6.4b protein.
Length = 639
Score = 27.9 bits (59), Expect = 6.5
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +2
Query: 398 PRSTQSCSPKLPSTPKPTE 454
P STQ+ P+LP P+P E
Sbjct: 89 PMSTQTSEPQLPDVPEPNE 107
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 27.9 bits (59), Expect = 6.5
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1
Query: 157 KAGFAGDDAPRAVFPSIVGRPRHQG 231
KA + G D P+A F I+G ++G
Sbjct: 44 KASYLGHDTPQATFREIIGNKEYRG 68
>Z66495-4|CAA91271.1| 954|Caenorhabditis elegans Hypothetical
protein C36A4.5 protein.
Length = 954
Score = 27.5 bits (58), Expect = 8.6
Identities = 20/74 (27%), Positives = 30/74 (40%)
Frame = +2
Query: 404 STQSCSPKLPSTPKPTERR*HRLCSRPSTHPPCT*LSRPCSHCTRPVVPPVSCWIPAMVY 583
ST + P+ P + R L SR T P C +R + TR VPP + P
Sbjct: 327 STTGAARTRPAIPAVSAPR--ALTSRAPTGPACPTTTRSAAPATRTAVPPRATAPPKAAS 384
Query: 584 PTQYPSTRVTPYRT 625
++ P P ++
Sbjct: 385 ASKAPIRAPIPAKS 398
>AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical
protein F41E6.11 protein.
Length = 316
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/48 (29%), Positives = 17/48 (35%)
Frame = +2
Query: 494 PPCT*LSRPCSHCTRPVVPPVSCWIPAMVYPTQYPSTRVTPYRTPSCV 637
PPC P C P PP +P P P+ P P C+
Sbjct: 27 PPCP---EPMPVCATPPCPPQYAPLPPPPMPAPAPAYNPYPCANPPCI 71
>AC024808-1|AAK29927.1| 309|Caenorhabditis elegans Hypothetical
protein Y53G8AM.4 protein.
Length = 309
Score = 27.5 bits (58), Expect = 8.6
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +3
Query: 546 YHRYRAGFRRWCIP 587
YH+YRA FR W +P
Sbjct: 135 YHKYRAFFRGWFVP 148
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,082,641
Number of Sequences: 27780
Number of extensions: 380438
Number of successful extensions: 1417
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 1287
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1403
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1416829972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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