Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0008_K20
         (581 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    23   1.7  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    23   2.2  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    22   5.1  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    22   5.1  
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    21   6.7  
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    21   6.7  
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    21   8.9  

>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 14/45 (31%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
 Frame = +1

Query: 448 PAEGARDSACQVSQRRVAGDRWQKI-AAAVPEKTTEECMQRCTYL 579
           P +  R+S C V     +G RW +I   ++P K  E     C  L
Sbjct: 10  PVKSFRESRCSVRCSAASGLRWFEIWRDSLPTKMRELNATACAAL 54


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 9/26 (34%), Positives = 17/26 (65%)
 Frame = +1

Query: 475 CQVSQRRVAGDRWQKIAAAVPEKTTE 552
           CQ +QR ++  +W+K   A+ E+ T+
Sbjct: 25  CQPTQRTMSKIQWRKPKPAMVEEKTQ 50


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 10/28 (35%), Positives = 14/28 (50%), Gaps = 3/28 (10%)
 Frame = +3

Query: 177 SGGL---WTDDDLAELARLVKKYPGGST 251
           SGG+   W +D  A +      YPGG +
Sbjct: 61  SGGVELGWFNDSAAAITSTSPSYPGGGS 88


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -3

Query: 459 AFCWAWDQTPPPVVSS 412
           AF W+WD+  P  + S
Sbjct: 177 AFGWSWDEVMPYYLKS 192


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = +2

Query: 233 VPGRQYGAVGAHSGRDAP 286
           VPG  YGA G+      P
Sbjct: 61  VPGHHYGAAGSQQDMPYP 78


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 3/32 (9%)
 Frame = +3

Query: 27  PGCRN---SARGAGARKRNGWVPPARDGECLL 113
           PG  N   S+ G  ARK+ G  P  ++  CL+
Sbjct: 158 PGSLNGYGSSDGCDARKKKGPTPRQQEELCLV 189


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 9/39 (23%), Positives = 16/39 (41%)
 Frame = +1

Query: 40  IRHEELERGSAMDGYHLPETENAYWTPRTSPMSHGLNQN 156
           + H   +     +   L E +N  +    SP++H L  N
Sbjct: 229 LNHNSDKMSDQQENLTLKEVDNKVYGMALSPVTHNLYYN 267


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,639
Number of Sequences: 438
Number of extensions: 3387
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16870914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)