Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_K19
(687 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0298 - 32925441-32925998,32926371-32926730,32927161-329272... 126 1e-29
07_01_0578 + 4295386-4296489,4297394-4297507 120 1e-27
09_02_0603 - 11150739-11150746,11150791-11151340 37 0.013
06_02_0298 + 13921310-13921834,13921923-13922063,13923601-139239... 36 0.023
02_02_0369 - 9505330-9505652,9507262-9507532,9507649-9507690,950... 32 0.37
04_01_0486 - 6404315-6404333,6404803-6405260 31 0.86
03_06_0242 + 32596846-32597268 31 0.86
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 31 1.1
05_03_0527 - 15025031-15025993 30 1.5
05_03_0524 + 14994170-14995132 30 1.5
12_01_1039 - 10699966-10700313,10700376-10700486,10700709-107008... 30 2.0
08_02_1253 - 25602258-25602640,25603305-25603767 30 2.0
05_05_0354 - 24347550-24347870 29 2.6
03_02_0637 - 10009580-10009903,10013314-10014153 29 3.5
07_03_1643 + 28329090-28329125,28329260-28329335,28329413-28330305 29 4.6
03_06_0427 - 33857008-33857137,33857224-33857258,33857966-338580... 29 4.6
03_04_0116 + 17406702-17409008,17409385-17409501,17409502-17409561 29 4.6
02_02_0219 + 7985152-7985575,7985818-7985894,7986067-7986127,798... 29 4.6
12_02_1005 + 25235757-25235915,25236258-25236374,25236467-252365... 28 6.0
02_05_1353 + 35866130-35866297,35866438-35868762 28 6.0
11_06_0767 + 27121761-27123335,27123701-27123910,27124843-271249... 28 8.0
10_01_0150 + 1747424-1747758,1748097-1748103 28 8.0
09_04_0609 - 18929600-18929646,18929753-18929924,18930304-189304... 28 8.0
06_03_0237 + 18576317-18576412,18577273-18577778,18577906-185780... 28 8.0
>03_06_0298 -
32925441-32925998,32926371-32926730,32927161-32927230,
32927642-32927797,32929181-32929242,32929339-32929352,
32930421-32930520,32931474-32932574
Length = 806
Score = 126 bits (305), Expect = 1e-29
Identities = 70/189 (37%), Positives = 102/189 (53%), Gaps = 2/189 (1%)
Frame = +2
Query: 125 GKVSRPGASLPLPFVFKAPIRPDLVMMS--TYQCRRTRATLLRQQGGRSSTAPSLGXXXX 298
G ++ A + +P V +APIRPD+V + C R + + ++ G ++A S G
Sbjct: 16 GDMATDSAGIQMPQVLRAPIRPDVVTFTHKLLSCNRRQPYAVSRRAGHQTSAESWGTGRA 75
Query: 299 XXXXXXXSWWWYPQIWAGCIR*HVPRRTYVRAETKPWRRWHRRVNLRQRCXXXXXXXXXS 478
+ G ++ R + A TK WRRWHRRVN+R R +
Sbjct: 76 VSRIPRVPGGGTHRAGQGAFG-NMCRGGRMFAPTKIWRRWHRRVNIRLRRIAVASALAAT 134
Query: 479 GVPALVQARGHIVEKIPELPLVVSDNVQEINKTKHAVIFLRRIKAWSDVLKVYKSQRLRA 658
VP+LV ARGH +E +PE PLVVSD+++ I KT ++ L++I A++D K S +RA
Sbjct: 135 AVPSLVLARGHRIEGVPEFPLVVSDSIESIEKTAQSIKVLKQIGAYADAEKTKDSVAIRA 194
Query: 659 GKGKMRNRR 685
GKGKMRNRR
Sbjct: 195 GKGKMRNRR 203
>07_01_0578 + 4295386-4296489,4297394-4297507
Length = 405
Score = 120 bits (288), Expect = 1e-27
Identities = 66/182 (36%), Positives = 97/182 (53%), Gaps = 2/182 (1%)
Frame = +2
Query: 146 ASLPLPFVFKAPIRPDLVMM--STYQCRRTRATLLRQQGGRSSTAPSLGXXXXXXXXXXX 319
+SL L VF+AP+RPD+V C + + + ++ G ++A S G
Sbjct: 24 SSLALAEVFRAPLRPDVVRFVHRLLSCNKRQPYAVSRRAGHQTSAESWGTGRAVSRIPRV 83
Query: 320 SWWWYPQIWAGCIR*HVPRRTYVRAETKPWRRWHRRVNLRQRCXXXXXXXXXSGVPALVQ 499
+ G ++ R + A TK WR+WHRRVN+ R + VP+LV
Sbjct: 84 PGGGTHRAGQGAFG-NMCRGGRMFAPTKTWRKWHRRVNVHLRRVAVASALAATSVPSLVL 142
Query: 500 ARGHIVEKIPELPLVVSDNVQEINKTKHAVIFLRRIKAWSDVLKVYKSQRLRAGKGKMRN 679
ARGH +E +PELPLV+SD+ + I KT A+ L+++ A++D K S +R GKGKMRN
Sbjct: 143 ARGHRIETVPELPLVISDSAESIEKTSQAIKILKQVGAYADAEKAKDSVGIRPGKGKMRN 202
Query: 680 RR 685
RR
Sbjct: 203 RR 204
>09_02_0603 - 11150739-11150746,11150791-11151340
Length = 185
Score = 37.1 bits (82), Expect = 0.013
Identities = 25/61 (40%), Positives = 32/61 (52%), Gaps = 4/61 (6%)
Frame = -3
Query: 454 GSTSLP*VHATVPAPPRLGFGANIRPPRHMLPNAPCPDLWVPP-PRHG---EYGLQHDRY 287
GST +P + VP PP LG + PP+ +P P P L VPP P+ G +YGL
Sbjct: 50 GSTFVPLPQSGVPPPPPLG-SFFVPPPQSRVPPPP-PQLGVPPLPQFGMMPQYGLNQSTA 107
Query: 286 P 284
P
Sbjct: 108 P 108
>06_02_0298 +
13921310-13921834,13921923-13922063,13923601-13923951,
13924071-13924130,13924261-13924380,13924569-13924718
Length = 448
Score = 36.3 bits (80), Expect = 0.023
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = -3
Query: 379 PPRHMLPNAPCPDLWVPPPRHGEYGLQHDRY 287
PPRH++P P P WVPPP + H Y
Sbjct: 308 PPRHLVPRGPAPP-WVPPPPPSDPAFWHHPY 337
>02_02_0369 -
9505330-9505652,9507262-9507532,9507649-9507690,
9508416-9508458,9508853-9508860
Length = 228
Score = 32.3 bits (70), Expect = 0.37
Identities = 21/63 (33%), Positives = 26/63 (41%)
Frame = -3
Query: 514 NMPSSLNEGRYPGRCHGGGHGSTSLP*VHATVPAPPRLGFGANIRPPRHMLPNAPCPDLW 335
N+P+ G PG G S+P A +P PP L PP P AP P+
Sbjct: 128 NVPTMPQTGAPPGSMPPGSMPPGSMPMQMAPLPRPPTL------PPPTSGAPGAPIPNSG 181
Query: 334 VPP 326
PP
Sbjct: 182 APP 184
>04_01_0486 - 6404315-6404333,6404803-6405260
Length = 158
Score = 31.1 bits (67), Expect = 0.86
Identities = 26/68 (38%), Positives = 31/68 (45%)
Frame = +3
Query: 285 GYRSCCSPYSPCRGGGTHRSGQGAFGNMCRGGRMFAPKPSRGGAGTVA*TYGRDVLPWPP 464
G R+ S S RGGG R G GA G R GR A ++GG G G +V P
Sbjct: 34 GDRALSSARSGGRGGGGGRRG-GASGGRGRRGRQRA---AQGGGGRQRARGGGEVAVVSP 89
Query: 465 PWQRPGYR 488
P + P R
Sbjct: 90 PGRSPPLR 97
>03_06_0242 + 32596846-32597268
Length = 140
Score = 31.1 bits (67), Expect = 0.86
Identities = 24/61 (39%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = +3
Query: 318 CRGGGTHRSGQGAFGNMCRGGRMFAPKPSRGGAGTVA*TYGRDVLP-WPPP-WQRPGYRP 491
C GGG G G GG + AP P R AG+V G P PPP +Q+PG++P
Sbjct: 5 CDGGGGRGDPSGGGG----GGGVGAP-PYRPAAGSVWSLPGMTPRPPGPPPKYQQPGHQP 59
Query: 492 S 494
+
Sbjct: 60 A 60
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 30.7 bits (66), Expect = 1.1
Identities = 26/73 (35%), Positives = 27/73 (36%), Gaps = 2/73 (2%)
Frame = -3
Query: 418 PAPPRLGFGANIRPPRHMLPNAPCPDLWV--PPPRHGEYGLQHDRYPKTRRC**PASLLT 245
P PP L G P P AP P V PPP HG G H K P LL
Sbjct: 750 PPPPPLMTGKKAPAPPPPPPQAPKPPGTVPPPPPLHGASGRPHPPSSKGLNAPAPPPLLG 809
Query: 244 Q*GGARSSTLIRG 206
+ A S RG
Sbjct: 810 RGREATGSAKGRG 822
>05_03_0527 - 15025031-15025993
Length = 320
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = +3
Query: 321 RGGGTHRSGQGAFGNMC-RGGRMFAPKPSRGGAGTVA*TYGRDVLPWPPPWQR 476
+G G + MC GGR+ P RGG G +A + + P PPP R
Sbjct: 74 KGNGKRQRSSVEGQRMCVDGGRLRVPDDGRGGGGGLA--FLPSIFPSPPPVPR 124
>05_03_0524 + 14994170-14995132
Length = 320
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = +3
Query: 321 RGGGTHRSGQGAFGNMC-RGGRMFAPKPSRGGAGTVA*TYGRDVLPWPPPWQR 476
+G G + MC GGR+ P RGG G +A + + P PPP R
Sbjct: 74 KGNGKRQRSSVEGQRMCVDGGRLRVPDDGRGGGGGLA--FLPSIFPSPPPVPR 124
>12_01_1039 -
10699966-10700313,10700376-10700486,10700709-10700860,
10701226-10701284,10702805-10703040
Length = 301
Score = 29.9 bits (64), Expect = 2.0
Identities = 19/57 (33%), Positives = 25/57 (43%)
Frame = +3
Query: 351 GAFGNMCRGGRMFAPKPSRGGAGTVA*TYGRDVLPWPPPWQRPGYRPSFRLEGILLR 521
G G++ R R P + G GTVA +P PPP P P FR+ + R
Sbjct: 10 GGGGSLGRVRRSAPPSVDQCGGGTVALGVLPTPVPAPPPPLLPEEEPGFRMGMVTTR 66
>08_02_1253 - 25602258-25602640,25603305-25603767
Length = 281
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = -1
Query: 276 GAVDDRPPC*RSRVARVLRH 217
G DDRPPC SR A RH
Sbjct: 120 GLADDRPPCSSSRAAATARH 139
>05_05_0354 - 24347550-24347870
Length = 106
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/33 (45%), Positives = 16/33 (48%)
Frame = +3
Query: 318 CRGGGTHRSGQGAFGNMCRGGRMFAPKPSRGGA 416
CRGGG G G G GGR A +P G A
Sbjct: 28 CRGGGRGGKGGGGGGGKGGGGRGGAGRPIAGAA 60
>03_02_0637 - 10009580-10009903,10013314-10014153
Length = 387
Score = 29.1 bits (62), Expect = 3.5
Identities = 17/38 (44%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = -3
Query: 376 PRHMLPNAPCPDLWVPPPRHGEY-GLQHDRYPK-TRRC 269
PR LP AP P+L PP R Y + D Y + RRC
Sbjct: 311 PRSDLPLAPMPELVAPPARPALYPPMTFDEYREHIRRC 348
>07_03_1643 + 28329090-28329125,28329260-28329335,28329413-28330305
Length = 334
Score = 28.7 bits (61), Expect = 4.6
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -3
Query: 421 VPAPPRLGFGANIRPPRHMLPNAPCPDLWVPP 326
+P PP++ +G + PP M P P L+ PP
Sbjct: 277 MPPPPQMSYGYSPYPPMMMPPPPPPEYLYGPP 308
>03_06_0427 -
33857008-33857137,33857224-33857258,33857966-33858046,
33858213-33858338,33858410-33858568,33858797-33858934,
33859084-33859155,33859359-33860273
Length = 551
Score = 28.7 bits (61), Expect = 4.6
Identities = 23/69 (33%), Positives = 27/69 (39%)
Frame = +3
Query: 324 GGGTHRSGQGAFGNMCRGGRMFAPKPSRGGAGTVA*TYGRDVLPWPPPWQRPGYRPSFRL 503
GGG G G G C GG S GG V +VL + PG P RL
Sbjct: 56 GGGGGGGGGGGSGGGCGGGGGGGGGSSGGGGSEVLERRVTEVL---HVYGLPGKLPELRL 112
Query: 504 EGILLRRFP 530
G+L + P
Sbjct: 113 PGVLPKPEP 121
>03_04_0116 + 17406702-17409008,17409385-17409501,17409502-17409561
Length = 827
Score = 28.7 bits (61), Expect = 4.6
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -3
Query: 367 MLPNAPCPDLWVPPPRHGEYGLQHDRYPKTR 275
M +A +++ P P GEYG + +RY TR
Sbjct: 189 MYDDADVHEIYWPDPDRGEYGNKRNRYNNTR 219
>02_02_0219 +
7985152-7985575,7985818-7985894,7986067-7986127,
7986276-7986519,7986613-7987006,7987292-7987729
Length = 545
Score = 28.7 bits (61), Expect = 4.6
Identities = 21/48 (43%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Frame = -3
Query: 490 GRYPGRCHGGGHGSTSLP*V-HATVPAPPRLGFGANIRPP---RHMLP 359
G Y G GG STSLP + A + APP + F A + PP H LP
Sbjct: 322 GYYTGN---GGASSTSLPLITRAAMAAPPPM-FAAAVAPPGRDHHRLP 365
>12_02_1005 +
25235757-25235915,25236258-25236374,25236467-25236535,
25237509-25237964
Length = 266
Score = 28.3 bits (60), Expect = 6.0
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = -3
Query: 415 APPRLGFGANIRPPRHMLPNAPCPDLWVPPPRHGEYG 305
APP G A + P MLP P P++ +PPP YG
Sbjct: 196 APPP-GPPATMMPFGAMLPYPPYPEVLLPPPPATLYG 231
>02_05_1353 + 35866130-35866297,35866438-35868762
Length = 830
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = -3
Query: 232 ARSSTLIRGHHDEVRSDGRLEYKREGER 149
+R+S +I H E R DGR+ +REG R
Sbjct: 563 SRASLVIVPFHKEQRYDGRMVCRREGRR 590
>11_06_0767 + 27121761-27123335,27123701-27123910,27124843-27124911,
27125387-27125656,27126027-27126377,27126480-27126757,
27126887-27128330
Length = 1398
Score = 27.9 bits (59), Expect = 8.0
Identities = 22/64 (34%), Positives = 24/64 (37%), Gaps = 5/64 (7%)
Frame = -3
Query: 211 RGHHDEVRSDGRLEY-KREG----ERSPWTTHFSDTRHKVGYDRLISLYQRSYSSKKHYR 47
RG HD SDGR Y R G R + D GYDR S S+ R
Sbjct: 1187 RGPHDRFISDGRGRYDNRRGFGGKGRDRSYSRSPDRGRSRGYDRRSGSRSLSSRSRSRSR 1246
Query: 46 RWQR 35
W R
Sbjct: 1247 SWSR 1250
>10_01_0150 + 1747424-1747758,1748097-1748103
Length = 113
Score = 27.9 bits (59), Expect = 8.0
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -3
Query: 427 ATVPAPPRLGFGANIRPPRHMLPNAPCPDL 338
A P PRL + PPR LP+ CP++
Sbjct: 74 ACPPTSPRLTAASARAPPRTCLPHRQCPEV 103
>09_04_0609 -
18929600-18929646,18929753-18929924,18930304-18930498,
18930691-18930801,18930885-18931097,18931643-18931720,
18931894-18932001,18932175-18932316,18932413-18933761,
18934492-18935121
Length = 1014
Score = 27.9 bits (59), Expect = 8.0
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = -3
Query: 361 PNAPCPDLWVPPPRHGEYGL 302
PN P +WVPP G YGL
Sbjct: 422 PNLQSPSVWVPPFGIGGYGL 441
>06_03_0237 +
18576317-18576412,18577273-18577778,18577906-18578024,
18578409-18578763,18578803-18578866,18578967-18579231,
18579354-18579529
Length = 526
Score = 27.9 bits (59), Expect = 8.0
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = +2
Query: 68 ITSLIKRNESVIPDFMSCIGKVSRP 142
+ ++ +RNE + PD M CI + +P
Sbjct: 274 LNTIFERNEQIEPDMMLCINQTYKP 298
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,962,226
Number of Sequences: 37544
Number of extensions: 594759
Number of successful extensions: 2337
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 2112
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2319
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1744894544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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