Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_K18
(468 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70783-1|CAA94852.2| 765|Caenorhabditis elegans Hypothetical pr... 30 0.72
U70856-4|AAB09167.1| 2090|Caenorhabditis elegans Hypothetical pr... 29 1.3
U70856-3|AAB09166.1| 2153|Caenorhabditis elegans Gei-4(four) int... 29 1.3
AF125451-6|AAD12825.1| 554|Caenorhabditis elegans Hypothetical ... 29 1.3
AF068718-3|AAO21430.1| 82|Caenorhabditis elegans Cystatin-like... 29 1.7
Z81113-2|CAB03279.1| 510|Caenorhabditis elegans Hypothetical pr... 28 2.9
Z78546-1|CAB01769.1| 364|Caenorhabditis elegans Hypothetical pr... 28 2.9
Z50109-13|CAD44092.1| 1549|Caenorhabditis elegans Hypothetical p... 28 3.8
Z50109-12|CAD44091.1| 1583|Caenorhabditis elegans Hypothetical p... 28 3.8
Z50109-11|CAD91624.1| 1520|Caenorhabditis elegans Hypothetical p... 28 3.8
Z50109-10|CAD89729.3| 1654|Caenorhabditis elegans Hypothetical p... 28 3.8
Z47810-5|CAD44133.1| 1549|Caenorhabditis elegans Hypothetical pr... 28 3.8
Z47810-4|CAD44132.1| 1583|Caenorhabditis elegans Hypothetical pr... 28 3.8
Z47810-3|CAD91632.1| 1520|Caenorhabditis elegans Hypothetical pr... 28 3.8
Z47810-2|CAD89730.3| 1654|Caenorhabditis elegans Hypothetical pr... 28 3.8
Z47810-1|CAD91631.1| 1234|Caenorhabditis elegans Hypothetical pr... 28 3.8
AF504312-1|AAM22693.1| 1583|Caenorhabditis elegans adaptor prote... 28 3.8
Z74046-4|CAC42385.1| 162|Caenorhabditis elegans Hypothetical pr... 27 5.1
Z74028-9|CAC42259.1| 162|Caenorhabditis elegans Hypothetical pr... 27 5.1
Z73899-8|CAA98079.2| 669|Caenorhabditis elegans Hypothetical pr... 27 5.1
AF067219-7|AAC17026.2| 372|Caenorhabditis elegans Innexin prote... 27 5.1
AC006673-6|AAF39926.2| 335|Caenorhabditis elegans Serpentine re... 27 5.1
Z78546-7|CAB01772.1| 375|Caenorhabditis elegans Hypothetical pr... 27 8.9
U53181-5|AAO12439.1| 250|Caenorhabditis elegans Heavy chain, un... 27 8.9
U53181-4|AAO12438.1| 440|Caenorhabditis elegans Heavy chain, un... 27 8.9
U53181-3|AAM29688.1| 516|Caenorhabditis elegans Heavy chain, un... 27 8.9
U53181-2|AAR04675.1| 1837|Caenorhabditis elegans Heavy chain, un... 27 8.9
U53181-1|AAR04676.1| 1839|Caenorhabditis elegans Heavy chain, un... 27 8.9
U52516-1|AAA97926.1| 1839|Caenorhabditis elegans hum-2 protein. 27 8.9
AL023830-4|CAA19474.1| 375|Caenorhabditis elegans Hypothetical ... 27 8.9
AC006656-1|AAF39881.1| 592|Caenorhabditis elegans Hypothetical ... 27 8.9
>Z70783-1|CAA94852.2| 765|Caenorhabditis elegans Hypothetical
protein ZK856.1 protein.
Length = 765
Score = 30.3 bits (65), Expect = 0.72
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +2
Query: 221 KSATGKLFNDLGILEHSQRAWQKTLSTSARGYLWLETNAP 340
K G L N+LG+LE+ A +K R +LE N+P
Sbjct: 200 KKICGNLLNELGVLEYMVYADKKLEEEQQRAKRYLEMNSP 239
>U70856-4|AAB09167.1| 2090|Caenorhabditis elegans Hypothetical protein
F57F4.4 protein.
Length = 2090
Score = 29.5 bits (63), Expect = 1.3
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = -1
Query: 309 RAEVDRVFCQARWLCSNIPRSLNSFPVALFGKLP 208
+A +FC + C++I +LN PVA+FG +P
Sbjct: 1502 KATGSEIFCPGK--CASIQATLNQDPVAIFGCVP 1533
>U70856-3|AAB09166.1| 2153|Caenorhabditis elegans Gei-4(four)
interacting proteinprotein 1 protein.
Length = 2153
Score = 29.5 bits (63), Expect = 1.3
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = -1
Query: 309 RAEVDRVFCQARWLCSNIPRSLNSFPVALFGKLP 208
+A +FC + C++I +LN PVA+FG +P
Sbjct: 1502 KATGSEIFCPGK--CASIQATLNQDPVAIFGCVP 1533
>AF125451-6|AAD12825.1| 554|Caenorhabditis elegans Hypothetical
protein Y37E11B.5 protein.
Length = 554
Score = 29.5 bits (63), Expect = 1.3
Identities = 12/22 (54%), Positives = 16/22 (72%), Gaps = 1/22 (4%)
Frame = -3
Query: 169 ANQQEKASPE-PWEPSITCHSL 107
A QQ + SPE P+EP+ CHS+
Sbjct: 128 AGQQSEKSPEKPYEPTTNCHSM 149
>AF068718-3|AAO21430.1| 82|Caenorhabditis elegans Cystatin-like
protease inhibitorprotein 1, isoform b protein.
Length = 82
Score = 29.1 bits (62), Expect = 1.7
Identities = 17/73 (23%), Positives = 32/73 (43%)
Frame = +2
Query: 194 VSRVNGNFPKSATGKLFNDLGILEHSQRAWQKTLSTSARGYLWLETNAPIYYTQTVDICK 373
+S ++ N G + D E+S +AW+ + + N P YY + +C
Sbjct: 12 ISIISVNAGMMTGGSVEQDASQKEYSDKAWKAVKGINDQA----SNNGPYYYAP-IKVCD 66
Query: 374 PYSQLSKDAFYIA 412
PY + ++D +A
Sbjct: 67 PYERGAEDRTALA 79
>Z81113-2|CAB03279.1| 510|Caenorhabditis elegans Hypothetical
protein T03F6.2 protein.
Length = 510
Score = 28.3 bits (60), Expect = 2.9
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = +2
Query: 131 FPWFWASFFLLVSIAGLVTYDVSRVNGNFPK---SATGKLFNDLGILEHSQR 277
F FW+SF S A L YD+++ + F K F D+G E +++
Sbjct: 174 FYGFWSSFSTTRSFAWLDHYDITQASNRFESRQIDQENKKFRDVGKQERNEQ 225
>Z78546-1|CAB01769.1| 364|Caenorhabditis elegans Hypothetical
protein T21H8.3 protein.
Length = 364
Score = 28.3 bits (60), Expect = 2.9
Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 6/71 (8%)
Frame = -1
Query: 195 TSYVTRPAMLTSKKKLAQN---HGNLLLLVILSRISCYI---LNHYSRELIKLQKILKPV 34
+S++ P M KK H NLL LV L+ SC I L +S +Q I+KP
Sbjct: 26 SSFLAFPMMFFVFKKYGHKVYYHSNLLFLVALNAASCLILAGLTAWSATNFFVQLIIKPS 85
Query: 33 DKNDALKRSSC 1
+ ++ C
Sbjct: 86 PCDMLMRTEFC 96
>Z50109-13|CAD44092.1| 1549|Caenorhabditis elegans Hypothetical
protein F45E10.1b protein.
Length = 1549
Score = 27.9 bits (59), Expect = 3.8
Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = -1
Query: 270 LCSNIPRSLNSFPVALFGKLPL-TLETSYVTRPAMLTSKKKLAQNHGNLLLLVILSRISC 94
+ NIP++ +F V++F +PL E +V +L Q H N + V+ +R+
Sbjct: 1327 ILDNIPKNRIAFVVSVFANVPLQNNEGPFVVCTVNRYQIPEL-QIHHNFKMSVMSNRLEG 1385
Query: 93 YILNHYSRELIK 58
+IL + R ++
Sbjct: 1386 FILRYLRRRAVE 1397
>Z50109-12|CAD44091.1| 1583|Caenorhabditis elegans Hypothetical
protein F45E10.1a protein.
Length = 1583
Score = 27.9 bits (59), Expect = 3.8
Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = -1
Query: 270 LCSNIPRSLNSFPVALFGKLPL-TLETSYVTRPAMLTSKKKLAQNHGNLLLLVILSRISC 94
+ NIP++ +F V++F +PL E +V +L Q H N + V+ +R+
Sbjct: 1361 ILDNIPKNRIAFVVSVFANVPLQNNEGPFVVCTVNRYQIPEL-QIHHNFKMSVMSNRLEG 1419
Query: 93 YILNHYSRELIK 58
+IL + R ++
Sbjct: 1420 FILRYLRRRAVE 1431
>Z50109-11|CAD91624.1| 1520|Caenorhabditis elegans Hypothetical
protein F45E10.1d protein.
Length = 1520
Score = 27.9 bits (59), Expect = 3.8
Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = -1
Query: 270 LCSNIPRSLNSFPVALFGKLPL-TLETSYVTRPAMLTSKKKLAQNHGNLLLLVILSRISC 94
+ NIP++ +F V++F +PL E +V +L Q H N + V+ +R+
Sbjct: 1298 ILDNIPKNRIAFVVSVFANVPLQNNEGPFVVCTVNRYQIPEL-QIHHNFKMSVMSNRLEG 1356
Query: 93 YILNHYSRELIK 58
+IL + R ++
Sbjct: 1357 FILRYLRRRAVE 1368
>Z50109-10|CAD89729.3| 1654|Caenorhabditis elegans Hypothetical
protein F45E10.1c protein.
Length = 1654
Score = 27.9 bits (59), Expect = 3.8
Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = -1
Query: 270 LCSNIPRSLNSFPVALFGKLPL-TLETSYVTRPAMLTSKKKLAQNHGNLLLLVILSRISC 94
+ NIP++ +F V++F +PL E +V +L Q H N + V+ +R+
Sbjct: 1432 ILDNIPKNRIAFVVSVFANVPLQNNEGPFVVCTVNRYQIPEL-QIHHNFKMSVMSNRLEG 1490
Query: 93 YILNHYSRELIK 58
+IL + R ++
Sbjct: 1491 FILRYLRRRAVE 1502
>Z47810-5|CAD44133.1| 1549|Caenorhabditis elegans Hypothetical protein
F45E10.1b protein.
Length = 1549
Score = 27.9 bits (59), Expect = 3.8
Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = -1
Query: 270 LCSNIPRSLNSFPVALFGKLPL-TLETSYVTRPAMLTSKKKLAQNHGNLLLLVILSRISC 94
+ NIP++ +F V++F +PL E +V +L Q H N + V+ +R+
Sbjct: 1327 ILDNIPKNRIAFVVSVFANVPLQNNEGPFVVCTVNRYQIPEL-QIHHNFKMSVMSNRLEG 1385
Query: 93 YILNHYSRELIK 58
+IL + R ++
Sbjct: 1386 FILRYLRRRAVE 1397
>Z47810-4|CAD44132.1| 1583|Caenorhabditis elegans Hypothetical protein
F45E10.1a protein.
Length = 1583
Score = 27.9 bits (59), Expect = 3.8
Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = -1
Query: 270 LCSNIPRSLNSFPVALFGKLPL-TLETSYVTRPAMLTSKKKLAQNHGNLLLLVILSRISC 94
+ NIP++ +F V++F +PL E +V +L Q H N + V+ +R+
Sbjct: 1361 ILDNIPKNRIAFVVSVFANVPLQNNEGPFVVCTVNRYQIPEL-QIHHNFKMSVMSNRLEG 1419
Query: 93 YILNHYSRELIK 58
+IL + R ++
Sbjct: 1420 FILRYLRRRAVE 1431
>Z47810-3|CAD91632.1| 1520|Caenorhabditis elegans Hypothetical protein
F45E10.1d protein.
Length = 1520
Score = 27.9 bits (59), Expect = 3.8
Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = -1
Query: 270 LCSNIPRSLNSFPVALFGKLPL-TLETSYVTRPAMLTSKKKLAQNHGNLLLLVILSRISC 94
+ NIP++ +F V++F +PL E +V +L Q H N + V+ +R+
Sbjct: 1298 ILDNIPKNRIAFVVSVFANVPLQNNEGPFVVCTVNRYQIPEL-QIHHNFKMSVMSNRLEG 1356
Query: 93 YILNHYSRELIK 58
+IL + R ++
Sbjct: 1357 FILRYLRRRAVE 1368
>Z47810-2|CAD89730.3| 1654|Caenorhabditis elegans Hypothetical protein
F45E10.1c protein.
Length = 1654
Score = 27.9 bits (59), Expect = 3.8
Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = -1
Query: 270 LCSNIPRSLNSFPVALFGKLPL-TLETSYVTRPAMLTSKKKLAQNHGNLLLLVILSRISC 94
+ NIP++ +F V++F +PL E +V +L Q H N + V+ +R+
Sbjct: 1432 ILDNIPKNRIAFVVSVFANVPLQNNEGPFVVCTVNRYQIPEL-QIHHNFKMSVMSNRLEG 1490
Query: 93 YILNHYSRELIK 58
+IL + R ++
Sbjct: 1491 FILRYLRRRAVE 1502
>Z47810-1|CAD91631.1| 1234|Caenorhabditis elegans Hypothetical protein
F45E10.1e protein.
Length = 1234
Score = 27.9 bits (59), Expect = 3.8
Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = -1
Query: 270 LCSNIPRSLNSFPVALFGKLPL-TLETSYVTRPAMLTSKKKLAQNHGNLLLLVILSRISC 94
+ NIP++ +F V++F +PL E +V +L Q H N + V+ +R+
Sbjct: 1012 ILDNIPKNRIAFVVSVFANVPLQNNEGPFVVCTVNRYQIPEL-QIHHNFKMSVMSNRLEG 1070
Query: 93 YILNHYSRELIK 58
+IL + R ++
Sbjct: 1071 FILRYLRRRAVE 1082
>AF504312-1|AAM22693.1| 1583|Caenorhabditis elegans adaptor protein
UNC-53 protein.
Length = 1583
Score = 27.9 bits (59), Expect = 3.8
Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = -1
Query: 270 LCSNIPRSLNSFPVALFGKLPL-TLETSYVTRPAMLTSKKKLAQNHGNLLLLVILSRISC 94
+ NIP++ +F V++F +PL E +V +L Q H N + V+ +R+
Sbjct: 1361 ILDNIPKNRIAFVVSVFANVPLQNNEGPFVVCTVNRYQIPEL-QIHHNFKMSVMSNRLEG 1419
Query: 93 YILNHYSRELIK 58
+IL + R ++
Sbjct: 1420 FILRYLRRRAVE 1431
>Z74046-4|CAC42385.1| 162|Caenorhabditis elegans Hypothetical
protein C14C10.6 protein.
Length = 162
Score = 27.5 bits (58), Expect = 5.1
Identities = 12/37 (32%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
Frame = +2
Query: 260 LEHSQRAWQKTLSTSARGYLWL---ETNAPIYYTQTV 361
+E S RAW + A G +W+ + N+ +YT T+
Sbjct: 1 MERSTRAWMSIVVVQAMGSVWMCYAKQNSASHYTSTL 37
>Z74028-9|CAC42259.1| 162|Caenorhabditis elegans Hypothetical
protein C14C10.6 protein.
Length = 162
Score = 27.5 bits (58), Expect = 5.1
Identities = 12/37 (32%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
Frame = +2
Query: 260 LEHSQRAWQKTLSTSARGYLWL---ETNAPIYYTQTV 361
+E S RAW + A G +W+ + N+ +YT T+
Sbjct: 1 MERSTRAWMSIVVVQAMGSVWMCYAKQNSASHYTSTL 37
>Z73899-8|CAA98079.2| 669|Caenorhabditis elegans Hypothetical
protein ZK829.10 protein.
Length = 669
Score = 27.5 bits (58), Expect = 5.1
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 6/65 (9%)
Frame = +2
Query: 140 FWASFFLLVSIAGLVTYDVSRVNGNFPKSATGKLFNDLGILEHSQ---RAW---QKTLST 301
F+ FF++VS G Y ++ +F K K FN IL H Q R+W +K +S
Sbjct: 530 FFILFFVIVSPFGFAYYSYLKMWHHFEKFEKEKQFNS-SILWHRQLHLRSWNRIEKEMSE 588
Query: 302 SARGY 316
R +
Sbjct: 589 EQRNF 593
>AF067219-7|AAC17026.2| 372|Caenorhabditis elegans Innexin protein
16 protein.
Length = 372
Score = 27.5 bits (58), Expect = 5.1
Identities = 15/50 (30%), Positives = 21/50 (42%)
Frame = +2
Query: 131 FPWFWASFFLLVSIAGLVTYDVSRVNGNFPKSATGKLFNDLGILEHSQRA 280
F WFW +F L+ + V + R + N L N GI Q+A
Sbjct: 266 FLWFWFAFLLVATAGDFVIWVWRRFDSNSKLGFILDLLNQEGIDHSPQKA 315
>AC006673-6|AAF39926.2| 335|Caenorhabditis elegans Serpentine
receptor, class h protein7 protein.
Length = 335
Score = 27.5 bits (58), Expect = 5.1
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +2
Query: 338 PIYYTQTVDICKPYS-QLSKDAFYIAMKKTGVLYNNMRGYI 457
P YT IC P S + AF+I + KT +NN R ++
Sbjct: 11 PFGYTVVHYICTPLSFPMYSLAFFILLFKTPSYFNNYRNFL 51
>Z78546-7|CAB01772.1| 375|Caenorhabditis elegans Hypothetical
protein T21H8.4 protein.
Length = 375
Score = 26.6 bits (56), Expect = 8.9
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 6/71 (8%)
Frame = -1
Query: 195 TSYVTRPAMLTSKKKLAQN---HGNLLLLVILSRISCYI---LNHYSRELIKLQKILKPV 34
+ Y+T P + KK A H NL+ L++L+ +SC + L +S L ++KP
Sbjct: 26 SGYLTFPILFIILKKYAFKVYYHPNLVFLMMLNVVSCLLLGGLTAWSATNFFLNLMIKPS 85
Query: 33 DKNDALKRSSC 1
+ LK C
Sbjct: 86 PCDLLLKTYFC 96
>U53181-5|AAO12439.1| 250|Caenorhabditis elegans Heavy chain,
unconventional myosinprotein 2, isoform f protein.
Length = 250
Score = 26.6 bits (56), Expect = 8.9
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = +3
Query: 162 WLALLVL*HMMFQESMVTSQKAQQENYSMTSV 257
W+ L L +MMF+ + +KA Q +++T +
Sbjct: 82 WMCALALNYMMFRRELCNFEKAIQIKHNVTQI 113
>U53181-4|AAO12438.1| 440|Caenorhabditis elegans Heavy chain,
unconventional myosinprotein 2, isoform e protein.
Length = 440
Score = 26.6 bits (56), Expect = 8.9
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = +3
Query: 162 WLALLVL*HMMFQESMVTSQKAQQENYSMTSV 257
W+ L L +MMF+ + +KA Q +++T +
Sbjct: 272 WMCALALNYMMFRRELCNFEKAIQIKHNVTQI 303
>U53181-3|AAM29688.1| 516|Caenorhabditis elegans Heavy chain,
unconventional myosinprotein 2, isoform c protein.
Length = 516
Score = 26.6 bits (56), Expect = 8.9
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = +3
Query: 162 WLALLVL*HMMFQESMVTSQKAQQENYSMTSV 257
W+ L L +MMF+ + +KA Q +++T +
Sbjct: 348 WMCALALNYMMFRRELCNFEKAIQIKHNVTQI 379
>U53181-2|AAR04675.1| 1837|Caenorhabditis elegans Heavy chain,
unconventional myosinprotein 2, isoform a protein.
Length = 1837
Score = 26.6 bits (56), Expect = 8.9
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = +3
Query: 162 WLALLVL*HMMFQESMVTSQKAQQENYSMTSV 257
W+ L L +MMF+ + +KA Q +++T +
Sbjct: 1669 WMCALALNYMMFRRELCNFEKAIQIKHNVTQI 1700
>U53181-1|AAR04676.1| 1839|Caenorhabditis elegans Heavy chain,
unconventional myosinprotein 2, isoform b protein.
Length = 1839
Score = 26.6 bits (56), Expect = 8.9
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = +3
Query: 162 WLALLVL*HMMFQESMVTSQKAQQENYSMTSV 257
W+ L L +MMF+ + +KA Q +++T +
Sbjct: 1671 WMCALALNYMMFRRELCNFEKAIQIKHNVTQI 1702
>U52516-1|AAA97926.1| 1839|Caenorhabditis elegans hum-2 protein.
Length = 1839
Score = 26.6 bits (56), Expect = 8.9
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = +3
Query: 162 WLALLVL*HMMFQESMVTSQKAQQENYSMTSV 257
W+ L L +MMF+ + +KA Q +++T +
Sbjct: 1671 WMCALALNYMMFRRELCNFEKAIQIKHNVTQI 1702
>AL023830-4|CAA19474.1| 375|Caenorhabditis elegans Hypothetical
protein T21H8.4 protein.
Length = 375
Score = 26.6 bits (56), Expect = 8.9
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 6/71 (8%)
Frame = -1
Query: 195 TSYVTRPAMLTSKKKLAQN---HGNLLLLVILSRISCYI---LNHYSRELIKLQKILKPV 34
+ Y+T P + KK A H NL+ L++L+ +SC + L +S L ++KP
Sbjct: 26 SGYLTFPILFIILKKYAFKVYYHPNLVFLMMLNVVSCLLLGGLTAWSATNFFLNLMIKPS 85
Query: 33 DKNDALKRSSC 1
+ LK C
Sbjct: 86 PCDLLLKTYFC 96
>AC006656-1|AAF39881.1| 592|Caenorhabditis elegans Hypothetical
protein H12I13.1 protein.
Length = 592
Score = 26.6 bits (56), Expect = 8.9
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = +3
Query: 237 NYSMTSVY*NTASVLGRKLYQLLHAAISGS 326
N+ Y TA+ LGR L LLH AI S
Sbjct: 243 NFKNVVYYKGTATTLGRGLQPLLHDAIISS 272
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,631,629
Number of Sequences: 27780
Number of extensions: 208938
Number of successful extensions: 619
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 586
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 619
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 839684522
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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