Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_K17
(645 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC065540-1|AAH65540.1| 631|Homo sapiens PABPC4 protein protein. 175 1e-43
AL365277-15|CAI16425.1| 410|Homo sapiens poly(A) binding protei... 175 1e-43
Y00345-1|CAA68428.1| 633|Homo sapiens protein ( Human mRNA for ... 169 6e-42
U68104-1|AAD08718.1| 636|Homo sapiens poly(A)-binding protein p... 169 6e-42
BC041863-1|AAH41863.1| 636|Homo sapiens poly(A) binding protein... 169 6e-42
BC023520-1|AAH23520.1| 636|Homo sapiens poly(A) binding protein... 169 6e-42
BC015958-1|AAH15958.1| 636|Homo sapiens PABPC1 protein protein. 169 6e-42
U75686-1|AAB97309.1| 644|Homo sapiens polyadenylate binding pro... 165 9e-41
U33818-1|AAC50350.1| 644|Homo sapiens inducible poly(A)-binding... 165 9e-41
AL845289-3|CAI12300.1| 644|Homo sapiens poly(A) binding protein... 165 9e-41
AL365277-4|CAI16414.1| 644|Homo sapiens poly(A) binding protein... 165 9e-41
AL845289-1|CAI12299.1| 615|Homo sapiens poly(A) binding protein... 164 2e-40
AL365277-2|CAI16413.1| 615|Homo sapiens poly(A) binding protein... 164 2e-40
AF132026-1|AAG38953.1| 631|Homo sapiens testis-specific poly(A)... 161 3e-39
DQ120640-1|ABB92425.1| 630|Homo sapiens PABP3 protein. 158 1e-38
BC027617-1|AAH27617.1| 631|Homo sapiens poly(A) binding protein... 158 1e-38
AL359757-1|CAH70805.1| 631|Homo sapiens poly(A) binding protein... 158 1e-38
BC045608-1|AAH45608.1| 631|Homo sapiens poly(A) binding protein... 155 1e-37
BC094755-1|AAH94755.1| 660|Homo sapiens PABPC4 protein protein. 143 5e-34
AL845289-2|CAI12298.1| 660|Homo sapiens poly(A) binding protein... 143 5e-34
AL365277-13|CAI16423.1| 194|Homo sapiens poly(A) binding protei... 143 5e-34
AL365277-3|CAI16412.1| 660|Homo sapiens poly(A) binding protein... 143 5e-34
AB208962-1|BAD92199.1| 358|Homo sapiens PABPC4 protein variant ... 143 5e-34
BC071591-1|AAH71591.1| 660|Homo sapiens PABPC4 protein protein. 142 7e-34
AL109839-1|CAI95631.1| 614|Homo sapiens chromosome 20 open read... 142 1e-33
AL008725-4|CAI95662.1| 614|Homo sapiens chromosome 20 open read... 142 1e-33
AK222917-1|BAD96637.1| 371|Homo sapiens PABPC4 protein variant ... 141 2e-33
Z48501-1|CAA88401.1| 522|Homo sapiens polyadenylate binding pro... 138 2e-32
AK127880-1|BAC87174.1| 146|Homo sapiens protein ( Homo sapiens ... 126 5e-29
AL109839-10|CAI95639.1| 168|Homo sapiens chromosome 20 open rea... 117 4e-26
AL109839-8|CAI95637.1| 149|Homo sapiens chromosome 20 open read... 94 3e-19
AL109839-9|CAI95638.1| 171|Homo sapiens chromosome 20 open read... 93 8e-19
AL109839-7|CAI95636.1| 151|Homo sapiens chromosome 20 open read... 93 8e-19
U95000-1|AAF88143.1| 2798|Homo sapiens hyd protein protein. 67 6e-11
AF006010-1|AAD01259.2| 2799|Homo sapiens progestin induced prote... 67 6e-11
AB020703-1|BAA74919.3| 2820|Homo sapiens KIAA0896 protein protein. 67 6e-11
BC118568-1|AAI18569.1| 252|Homo sapiens PABPC4 protein protein. 48 3e-05
BC106908-1|AAI06909.1| 281|Homo sapiens PABPC4 protein protein. 48 3e-05
BC068242-1|AAH68242.1| 269|Homo sapiens LOC728773 protein protein. 41 0.003
BX537907-1|CAD97892.1| 372|Homo sapiens hypothetical protein pr... 36 0.093
BC012055-1|AAH12055.1| 384|Homo sapiens aryl hydrocarbon recept... 36 0.093
AK023970-1|BAB14744.1| 384|Homo sapiens protein ( Homo sapiens ... 36 0.093
AJ830743-1|CAH25996.1| 360|Homo sapiens aryl hydrocarbon recept... 36 0.093
AJ830742-1|CAH25995.1| 362|Homo sapiens aryl hydrocarbon recept... 36 0.093
AJ633678-1|CAG17883.1| 321|Homo sapiens aryl hydrocarbon recept... 36 0.093
AJ633677-1|CAG17882.1| 324|Homo sapiens aryl hydrocarbon recept... 36 0.093
AF525970-1|AAM88405.1| 321|Homo sapiens aryl hydrocarbon recept... 36 0.093
AF180472-1|AAF26708.1| 384|Homo sapiens aryl-hydrocarbon intera... 36 0.093
AF148864-1|AAF74023.1| 384|Homo sapiens aryl-hydrocarbon intera... 36 0.093
BC030578-1|AAH30578.1| 515|Homo sapiens EIF4G3 protein protein. 34 0.38
AL672037-2|CAI16194.1| 630|Homo sapiens eukaryotic translation ... 34 0.38
AL627311-1|CAI14552.1| 630|Homo sapiens eukaryotic translation ... 34 0.38
AL358392-1|CAI12154.1| 630|Homo sapiens eukaryotic translation ... 34 0.38
BT007367-1|AAP36031.1| 868|Homo sapiens programmed cell death 6... 33 0.87
BC068454-1|AAH68454.1| 873|Homo sapiens PDCD6IP protein protein. 33 0.87
BC020066-1|AAH20066.1| 868|Homo sapiens programmed cell death 6... 33 0.87
AK002122-1|BAA92092.1| 617|Homo sapiens protein ( Homo sapiens ... 33 0.87
AF349951-1|AAK20398.1| 868|Homo sapiens HP95 protein. 33 0.87
AB037796-1|BAA92613.1| 546|Homo sapiens KIAA1375 protein protein. 33 0.87
AL109839-6|CAI95635.1| 134|Homo sapiens chromosome 20 open read... 32 2.0
BC082241-1|AAH82241.1| 1179|Homo sapiens USP19 protein protein. 31 3.5
AB209510-1|BAD92747.1| 964|Homo sapiens EBNA-2 co-activator var... 31 3.5
AF250394-1|AAQ14260.1| 868|Homo sapiens dopamine receptor inter... 31 4.6
AF151793-1|AAF08220.1| 868|Homo sapiens ALG-2 interacting prote... 31 4.6
DQ846849-1|ABI15201.1| 111|Homo sapiens dopamine D4 receptor pr... 30 6.1
DQ314886-1|ABC40745.1| 828|Homo sapiens protein phosphatase 1, ... 30 6.1
BC142727-1|AAI42728.1| 1449|Homo sapiens USP19 protein protein. 30 6.1
BC142660-1|AAI42661.1| 1447|Homo sapiens USP19 protein protein. 30 6.1
BC106029-1|AAI06030.1| 799|Homo sapiens USP19 protein protein. 30 6.1
BC064913-1|AAH64913.1| 828|Homo sapiens protein phosphatase 1, ... 30 6.1
BC048269-1|AAH48269.1| 436|Homo sapiens USP19 protein protein. 30 6.1
BC032298-1|AAH32298.1| 828|Homo sapiens protein phosphatase 1, ... 30 6.1
AY869712-1|AAW51146.1| 827|Homo sapiens NFkB interacting protei... 30 6.1
AK130326-1|BAC85327.1| 508|Homo sapiens protein ( Homo sapiens ... 30 6.1
AK128229-1|BAC87339.1| 679|Homo sapiens protein ( Homo sapiens ... 30 6.1
AK125938-1|BAC86351.1| 679|Homo sapiens protein ( Homo sapiens ... 30 6.1
AJ888472-1|CAI60219.1| 828|Homo sapiens inhibitor of apoptosis ... 30 6.1
AJ606308-1|CAE54436.1| 4262|Homo sapiens secreted mucin MUC17 pr... 30 6.1
AJ606307-1|CAE54435.1| 4493|Homo sapiens membrane mucin MUC17 pr... 30 6.1
AB209119-1|BAD92356.1| 1780|Homo sapiens eukaryotic translation ... 30 6.1
AB001025-1|BAA23795.1| 4866|Homo sapiens brain ryanodine recepto... 30 8.1
>BC065540-1|AAH65540.1| 631|Homo sapiens PABPC4 protein protein.
Length = 631
Score = 175 bits (425), Expect = 1e-43
Identities = 107/219 (48%), Positives = 126/219 (57%), Gaps = 13/219 (5%)
Frame = +3
Query: 27 FQPSSAGGYFVPTIPPAQR---FYGPAQMPQIRPTPRWTAQPPVRPSTQTPASAYANMQX 197
FQP+ AGGYFVP +P AQ +Y P Q+ Q+RP PRW Q RP +
Sbjct: 401 FQPA-AGGYFVPAVPQAQGRPPYYTPNQLAQMRPNPRW--QQGGRPQGFQGMPSAIRQSG 457
Query: 198 XXXXXXXXXXXXXXXTSLGARPITGQQGVAGTAGSI--RAPLVTQSSRP-AGYKYTANMR 368
S G T + GV ++ RA + + R A YKY +++R
Sbjct: 458 PRPTLRHLAPTGNAPASRGLPTTTQRVGVPTAVQNLAPRAAVAAAAPRAVAPYKYASSVR 517
Query: 369 NP-------PAPQPAVHIQGQEXXXXXXXXXXXXQEQKQMLGERLFPLIQRMHPDLAGKI 527
+P APQPAVH+QGQE QEQKQMLGERLFPLIQ MH +LAGKI
Sbjct: 518 SPHPAIQPLQAPQPAVHVQGQEPLTASMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKI 577
Query: 528 TGMLLEIDNSELLHMLEHGESLKAKVDEAVAVLQAHQAK 644
TGMLLEIDNSELLHMLE ESL++KVDEAVAVLQAH AK
Sbjct: 578 TGMLLEIDNSELLHMLESPESLRSKVDEAVAVLQAHHAK 616
>AL365277-15|CAI16425.1| 410|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (induciblela) protein.
Length = 410
Score = 175 bits (425), Expect = 1e-43
Identities = 107/219 (48%), Positives = 126/219 (57%), Gaps = 13/219 (5%)
Frame = +3
Query: 27 FQPSSAGGYFVPTIPPAQR---FYGPAQMPQIRPTPRWTAQPPVRPSTQTPASAYANMQX 197
FQP+ AGGYFVP +P AQ +Y P Q+ Q+RP PRW Q RP +
Sbjct: 180 FQPA-AGGYFVPAVPQAQGRPPYYTPNQLAQMRPNPRW--QQGGRPQGFQGMPSAIRQSG 236
Query: 198 XXXXXXXXXXXXXXXTSLGARPITGQQGVAGTAGSI--RAPLVTQSSRP-AGYKYTANMR 368
S G T + GV ++ RA + + R A YKY +++R
Sbjct: 237 PRPTLRHLAPTGNAPASRGLPTTTQRVGVPTAVQNLAPRAAVAAAAPRAVAPYKYASSVR 296
Query: 369 NP-------PAPQPAVHIQGQEXXXXXXXXXXXXQEQKQMLGERLFPLIQRMHPDLAGKI 527
+P APQPAVH+QGQE QEQKQMLGERLFPLIQ MH +LAGKI
Sbjct: 297 SPHPAIQPLQAPQPAVHVQGQEPLTASMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKI 356
Query: 528 TGMLLEIDNSELLHMLEHGESLKAKVDEAVAVLQAHQAK 644
TGMLLEIDNSELLHMLE ESL++KVDEAVAVLQAH AK
Sbjct: 357 TGMLLEIDNSELLHMLESPESLRSKVDEAVAVLQAHHAK 395
>Y00345-1|CAA68428.1| 633|Homo sapiens protein ( Human mRNA for polyA
binding protein. ).
Length = 633
Score = 169 bits (412), Expect = 6e-42
Identities = 102/221 (46%), Positives = 117/221 (52%), Gaps = 15/221 (6%)
Frame = +3
Query: 27 FQPSSAGGYFVPTIPPAQR---FYGPAQMPQIRPTPRWTAQPP-VRPSTQTPASAYANMQ 194
+QP+ GYF+ IP Q +Y P+Q+ Q+RP+PRWTAQ P P +
Sbjct: 397 YQPAPPSGYFMAAIPQTQNRAAYYPPSQVAQLRPSPRWTAQGARPHPFQNMPGAIRPAAP 456
Query: 195 XXXXXXXXXXXXXXXXTSLGARPITGQQGVAGTAGSIRAPLVTQSSRPAG-YKYTANMRN 371
R G + A T + R YKY A +RN
Sbjct: 457 RPPFSTMRPASSQVPRVMSTQRVANTSTQTMGPRPAAAAAAATPAVRTVPQYKYAAGVRN 516
Query: 372 PPA----------PQPAVHIQGQEXXXXXXXXXXXXQEQKQMLGERLFPLIQRMHPDLAG 521
P QPAVH+QGQE QEQKQMLGERLFPLIQ MHP LAG
Sbjct: 517 PQQHLNAQPQVTMQQPAVHVQGQEPLTASMLASAPPQEQKQMLGERLFPLIQAMHPTLAG 576
Query: 522 KITGMLLEIDNSELLHMLEHGESLKAKVDEAVAVLQAHQAK 644
KITGMLLEIDNSELLHMLE ESL++KVDEAVAVLQAHQAK
Sbjct: 577 KITGMLLEIDNSELLHMLESPESLRSKVDEAVAVLQAHQAK 617
>U68104-1|AAD08718.1| 636|Homo sapiens poly(A)-binding protein
protein.
Length = 636
Score = 169 bits (412), Expect = 6e-42
Identities = 102/221 (46%), Positives = 117/221 (52%), Gaps = 15/221 (6%)
Frame = +3
Query: 27 FQPSSAGGYFVPTIPPAQR---FYGPAQMPQIRPTPRWTAQPP-VRPSTQTPASAYANMQ 194
+QP+ GYF+ IP Q +Y P+Q+ Q+RP+PRWTAQ P P +
Sbjct: 400 YQPAPPSGYFMAAIPQTQNRAAYYPPSQIAQLRPSPRWTAQGARPHPFQNMPGAIRPAAP 459
Query: 195 XXXXXXXXXXXXXXXXTSLGARPITGQQGVAGTAGSIRAPLVTQSSRPAG-YKYTANMRN 371
R G + A T + R YKY A +RN
Sbjct: 460 RPPFSTMRPASSQVPRVMSTQRVANTSTQTMGPRPAAAAAAATPAVRTVPQYKYAAGVRN 519
Query: 372 PPA----------PQPAVHIQGQEXXXXXXXXXXXXQEQKQMLGERLFPLIQRMHPDLAG 521
P QPAVH+QGQE QEQKQMLGERLFPLIQ MHP LAG
Sbjct: 520 PQQHLNAQPQVTMQQPAVHVQGQEPLTASMLASAPPQEQKQMLGERLFPLIQAMHPTLAG 579
Query: 522 KITGMLLEIDNSELLHMLEHGESLKAKVDEAVAVLQAHQAK 644
KITGMLLEIDNSELLHMLE ESL++KVDEAVAVLQAHQAK
Sbjct: 580 KITGMLLEIDNSELLHMLESPESLRSKVDEAVAVLQAHQAK 620
>BC041863-1|AAH41863.1| 636|Homo sapiens poly(A) binding protein,
cytoplasmic 1 protein.
Length = 636
Score = 169 bits (412), Expect = 6e-42
Identities = 102/221 (46%), Positives = 117/221 (52%), Gaps = 15/221 (6%)
Frame = +3
Query: 27 FQPSSAGGYFVPTIPPAQR---FYGPAQMPQIRPTPRWTAQPP-VRPSTQTPASAYANMQ 194
+QP+ GYF+ IP Q +Y P+Q+ Q+RP+PRWTAQ P P +
Sbjct: 400 YQPAPPSGYFMAAIPQTQNRAAYYPPSQIAQLRPSPRWTAQGARPHPFQNMPGAIRPAAP 459
Query: 195 XXXXXXXXXXXXXXXXTSLGARPITGQQGVAGTAGSIRAPLVTQSSRPAG-YKYTANMRN 371
R G + A T + R YKY A +RN
Sbjct: 460 RPPFSTMRPASSQVPRVMSTQRVANTSTQTMGPRPAAAAAAATPAVRTVPQYKYAAGVRN 519
Query: 372 PPA----------PQPAVHIQGQEXXXXXXXXXXXXQEQKQMLGERLFPLIQRMHPDLAG 521
P QPAVH+QGQE QEQKQMLGERLFPLIQ MHP LAG
Sbjct: 520 PQQHLNAQPQVTMQQPAVHVQGQEPLTASMLASAPPQEQKQMLGERLFPLIQAMHPTLAG 579
Query: 522 KITGMLLEIDNSELLHMLEHGESLKAKVDEAVAVLQAHQAK 644
KITGMLLEIDNSELLHMLE ESL++KVDEAVAVLQAHQAK
Sbjct: 580 KITGMLLEIDNSELLHMLESPESLRSKVDEAVAVLQAHQAK 620
>BC023520-1|AAH23520.1| 636|Homo sapiens poly(A) binding protein,
cytoplasmic 1 protein.
Length = 636
Score = 169 bits (412), Expect = 6e-42
Identities = 102/221 (46%), Positives = 117/221 (52%), Gaps = 15/221 (6%)
Frame = +3
Query: 27 FQPSSAGGYFVPTIPPAQR---FYGPAQMPQIRPTPRWTAQPP-VRPSTQTPASAYANMQ 194
+QP+ GYF+ IP Q +Y P+Q+ Q+RP+PRWTAQ P P +
Sbjct: 400 YQPAPPSGYFMAAIPQTQNRAAYYPPSQIAQLRPSPRWTAQGARPHPFQNMPGAIRPAAP 459
Query: 195 XXXXXXXXXXXXXXXXTSLGARPITGQQGVAGTAGSIRAPLVTQSSRPAG-YKYTANMRN 371
R G + A T + R YKY A +RN
Sbjct: 460 RPPFSTMRPASSQVPRVMSTQRVANTSTQTMGPRPAAAAAAATPAVRTVPQYKYAAGVRN 519
Query: 372 PPA----------PQPAVHIQGQEXXXXXXXXXXXXQEQKQMLGERLFPLIQRMHPDLAG 521
P QPAVH+QGQE QEQKQMLGERLFPLIQ MHP LAG
Sbjct: 520 PQQHLNAQPQVTMQQPAVHVQGQEPLTASMLASAPPQEQKQMLGERLFPLIQAMHPTLAG 579
Query: 522 KITGMLLEIDNSELLHMLEHGESLKAKVDEAVAVLQAHQAK 644
KITGMLLEIDNSELLHMLE ESL++KVDEAVAVLQAHQAK
Sbjct: 580 KITGMLLEIDNSELLHMLESPESLRSKVDEAVAVLQAHQAK 620
>BC015958-1|AAH15958.1| 636|Homo sapiens PABPC1 protein protein.
Length = 636
Score = 169 bits (412), Expect = 6e-42
Identities = 102/221 (46%), Positives = 117/221 (52%), Gaps = 15/221 (6%)
Frame = +3
Query: 27 FQPSSAGGYFVPTIPPAQR---FYGPAQMPQIRPTPRWTAQPP-VRPSTQTPASAYANMQ 194
+QP+ GYF+ IP Q +Y P+Q+ Q+RP+PRWTAQ P P +
Sbjct: 400 YQPAPPSGYFMAAIPQTQNRAAYYPPSQIAQLRPSPRWTAQGARPHPFQNMPGAIRPAAP 459
Query: 195 XXXXXXXXXXXXXXXXTSLGARPITGQQGVAGTAGSIRAPLVTQSSRPAG-YKYTANMRN 371
R G + A T + R YKY A +RN
Sbjct: 460 RPPFSTMRPASSQVPRVMSTQRVANTSTQTMGPRPAAAAAAATPAVRTVPQYKYAAGVRN 519
Query: 372 PPA----------PQPAVHIQGQEXXXXXXXXXXXXQEQKQMLGERLFPLIQRMHPDLAG 521
P QPAVH+QGQE QEQKQMLGERLFPLIQ MHP LAG
Sbjct: 520 PQQHLNAQPQVTMQQPAVHVQGQEPLTASMLASAPPQEQKQMLGERLFPLIQAMHPTLAG 579
Query: 522 KITGMLLEIDNSELLHMLEHGESLKAKVDEAVAVLQAHQAK 644
KITGMLLEIDNSELLHMLE ESL++KVDEAVAVLQAHQAK
Sbjct: 580 KITGMLLEIDNSELLHMLESPESLRSKVDEAVAVLQAHQAK 620
>U75686-1|AAB97309.1| 644|Homo sapiens polyadenylate binding protein
protein.
Length = 644
Score = 165 bits (402), Expect = 9e-41
Identities = 108/232 (46%), Positives = 125/232 (53%), Gaps = 26/232 (11%)
Frame = +3
Query: 27 FQPSSAGGYFVPTIPPAQR---FYGPAQMPQIRPTPRWTAQPPVRPSTQTPASAYANMQX 197
FQP+ AGGYFVP +P AQ +Y P Q+ Q+RP PRW Q RP +
Sbjct: 401 FQPA-AGGYFVPAVPQAQGRPPYYTPNQLAQMRPNPRW--QQGGRPQGFQGMPSAIRQSG 457
Query: 198 XXXXXXXXXXXXXXXTSLGARPITG----QQGVAGTAGSIRAPLVTQSSRP--------- 338
A G QQG+ + S P Q+ P
Sbjct: 458 PRPTLRHLAPTGSECPDRLAMDFGGAGAAQQGLTDSCQSGGVPTAVQNLAPRAAVAAAAP 517
Query: 339 ---AGYKYTANMRNP-------PAPQPAVHIQGQEXXXXXXXXXXXXQEQKQMLGERLFP 488
A YKY +++R+P APQPAVH+QGQE QEQKQMLGERLFP
Sbjct: 518 RAVAPYKYASSVRSPHPAIQPLQAPQPAVHVQGQEPLTASMLAAAPPQEQKQMLGERLFP 577
Query: 489 LIQRMHPDLAGKITGMLLEIDNSELLHMLEHGESLKAKVDEAVAVLQAHQAK 644
LIQ MH +LAGKITGMLLEIDNSELLHMLE ESL++KVDEAVAVLQAH AK
Sbjct: 578 LIQTMHSNLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVLQAHHAK 629
>U33818-1|AAC50350.1| 644|Homo sapiens inducible poly(A)-binding
protein protein.
Length = 644
Score = 165 bits (402), Expect = 9e-41
Identities = 108/232 (46%), Positives = 125/232 (53%), Gaps = 26/232 (11%)
Frame = +3
Query: 27 FQPSSAGGYFVPTIPPAQR---FYGPAQMPQIRPTPRWTAQPPVRPSTQTPASAYANMQX 197
FQP+ AGGYFVP +P AQ +Y P Q+ Q+RP PRW Q RP +
Sbjct: 401 FQPA-AGGYFVPAVPQAQGRPPYYTPNQLAQMRPNPRW--QQGGRPQGFQGMPSAIRQSG 457
Query: 198 XXXXXXXXXXXXXXXTSLGARPITG----QQGVAGTAGSIRAPLVTQSSRP--------- 338
A G QQG+ + S P Q+ P
Sbjct: 458 PRPTLRHLAPTGSECPDRLAMDFGGAGAAQQGLTDSCQSGGVPTAVQNLAPRAAVAAAAP 517
Query: 339 ---AGYKYTANMRNP-------PAPQPAVHIQGQEXXXXXXXXXXXXQEQKQMLGERLFP 488
A YKY +++R+P APQPAVH+QGQE QEQKQMLGERLFP
Sbjct: 518 RAVAPYKYASSVRSPHPAIQPLQAPQPAVHVQGQEPLTASMLAAAPPQEQKQMLGERLFP 577
Query: 489 LIQRMHPDLAGKITGMLLEIDNSELLHMLEHGESLKAKVDEAVAVLQAHQAK 644
LIQ MH +LAGKITGMLLEIDNSELLHMLE ESL++KVDEAVAVLQAH AK
Sbjct: 578 LIQTMHSNLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVLQAHHAK 629
>AL845289-3|CAI12300.1| 644|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducibletaining 6 protein.
Length = 644
Score = 165 bits (402), Expect = 9e-41
Identities = 108/232 (46%), Positives = 125/232 (53%), Gaps = 26/232 (11%)
Frame = +3
Query: 27 FQPSSAGGYFVPTIPPAQR---FYGPAQMPQIRPTPRWTAQPPVRPSTQTPASAYANMQX 197
FQP+ AGGYFVP +P AQ +Y P Q+ Q+RP PRW Q RP +
Sbjct: 401 FQPA-AGGYFVPAVPQAQGRPPYYTPNQLAQMRPNPRW--QQGGRPQGFQGMPSAIRQSG 457
Query: 198 XXXXXXXXXXXXXXXTSLGARPITG----QQGVAGTAGSIRAPLVTQSSRP--------- 338
A G QQG+ + S P Q+ P
Sbjct: 458 PRPTLRHLAPTGSECPDRLAMDFGGAGAAQQGLTDSCQSGGVPTAVQNLAPRAAVAAAAP 517
Query: 339 ---AGYKYTANMRNP-------PAPQPAVHIQGQEXXXXXXXXXXXXQEQKQMLGERLFP 488
A YKY +++R+P APQPAVH+QGQE QEQKQMLGERLFP
Sbjct: 518 RAVAPYKYASSVRSPHPAIQPLQAPQPAVHVQGQEPLTASMLAAAPPQEQKQMLGERLFP 577
Query: 489 LIQRMHPDLAGKITGMLLEIDNSELLHMLEHGESLKAKVDEAVAVLQAHQAK 644
LIQ MH +LAGKITGMLLEIDNSELLHMLE ESL++KVDEAVAVLQAH AK
Sbjct: 578 LIQTMHSNLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVLQAHHAK 629
>AL365277-4|CAI16414.1| 644|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (induciblepeptide, antigen CD29 includes
protein.
Length = 644
Score = 165 bits (402), Expect = 9e-41
Identities = 108/232 (46%), Positives = 125/232 (53%), Gaps = 26/232 (11%)
Frame = +3
Query: 27 FQPSSAGGYFVPTIPPAQR---FYGPAQMPQIRPTPRWTAQPPVRPSTQTPASAYANMQX 197
FQP+ AGGYFVP +P AQ +Y P Q+ Q+RP PRW Q RP +
Sbjct: 401 FQPA-AGGYFVPAVPQAQGRPPYYTPNQLAQMRPNPRW--QQGGRPQGFQGMPSAIRQSG 457
Query: 198 XXXXXXXXXXXXXXXTSLGARPITG----QQGVAGTAGSIRAPLVTQSSRP--------- 338
A G QQG+ + S P Q+ P
Sbjct: 458 PRPTLRHLAPTGSECPDRLAMDFGGAGAAQQGLTDSCQSGGVPTAVQNLAPRAAVAAAAP 517
Query: 339 ---AGYKYTANMRNP-------PAPQPAVHIQGQEXXXXXXXXXXXXQEQKQMLGERLFP 488
A YKY +++R+P APQPAVH+QGQE QEQKQMLGERLFP
Sbjct: 518 RAVAPYKYASSVRSPHPAIQPLQAPQPAVHVQGQEPLTASMLAAAPPQEQKQMLGERLFP 577
Query: 489 LIQRMHPDLAGKITGMLLEIDNSELLHMLEHGESLKAKVDEAVAVLQAHQAK 644
LIQ MH +LAGKITGMLLEIDNSELLHMLE ESL++KVDEAVAVLQAH AK
Sbjct: 578 LIQTMHSNLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVLQAHHAK 629
>AL845289-1|CAI12299.1| 615|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducibleeudogene protein.
Length = 615
Score = 164 bits (399), Expect = 2e-40
Identities = 106/216 (49%), Positives = 125/216 (57%), Gaps = 10/216 (4%)
Frame = +3
Query: 27 FQPSSAGGYFVPTIPPAQR---FYGPAQMPQIRPTPRWTAQPPVRPSTQTPASAYANMQX 197
FQP+ AGGYFVP +P AQ +Y P Q+ Q+RP PRW Q RP + A Q
Sbjct: 401 FQPA-AGGYFVPAVPQAQGRPPYYTPNQLAQMRPNPRW--QQGGRPQGFQGMPS-AIRQS 456
Query: 198 XXXXXXXXXXXXXXXTSLGARPITGQQGVAGTAGSIRAPLVTQSSRPAGYKYTANMRNP- 374
T++ + + + VA A AP YKY +++R+P
Sbjct: 457 GPRPTLRHLAPTGVPTAV--QNLAPRAAVAAAAPRAVAP----------YKYASSVRSPH 504
Query: 375 ------PAPQPAVHIQGQEXXXXXXXXXXXXQEQKQMLGERLFPLIQRMHPDLAGKITGM 536
APQPAVH+QGQE QEQKQMLGERLFPLIQ MH +LAGKITGM
Sbjct: 505 PAIQPLQAPQPAVHVQGQEPLTASMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGM 564
Query: 537 LLEIDNSELLHMLEHGESLKAKVDEAVAVLQAHQAK 644
LLEIDNSELLHMLE ESL++KVDEAVAVLQAH AK
Sbjct: 565 LLEIDNSELLHMLESPESLRSKVDEAVAVLQAHHAK 600
>AL365277-2|CAI16413.1| 615|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (induciblely, member 5 protein.
Length = 615
Score = 164 bits (399), Expect = 2e-40
Identities = 106/216 (49%), Positives = 125/216 (57%), Gaps = 10/216 (4%)
Frame = +3
Query: 27 FQPSSAGGYFVPTIPPAQR---FYGPAQMPQIRPTPRWTAQPPVRPSTQTPASAYANMQX 197
FQP+ AGGYFVP +P AQ +Y P Q+ Q+RP PRW Q RP + A Q
Sbjct: 401 FQPA-AGGYFVPAVPQAQGRPPYYTPNQLAQMRPNPRW--QQGGRPQGFQGMPS-AIRQS 456
Query: 198 XXXXXXXXXXXXXXXTSLGARPITGQQGVAGTAGSIRAPLVTQSSRPAGYKYTANMRNP- 374
T++ + + + VA A AP YKY +++R+P
Sbjct: 457 GPRPTLRHLAPTGVPTAV--QNLAPRAAVAAAAPRAVAP----------YKYASSVRSPH 504
Query: 375 ------PAPQPAVHIQGQEXXXXXXXXXXXXQEQKQMLGERLFPLIQRMHPDLAGKITGM 536
APQPAVH+QGQE QEQKQMLGERLFPLIQ MH +LAGKITGM
Sbjct: 505 PAIQPLQAPQPAVHVQGQEPLTASMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGM 564
Query: 537 LLEIDNSELLHMLEHGESLKAKVDEAVAVLQAHQAK 644
LLEIDNSELLHMLE ESL++KVDEAVAVLQAH AK
Sbjct: 565 LLEIDNSELLHMLESPESLRSKVDEAVAVLQAHHAK 600
>AF132026-1|AAG38953.1| 631|Homo sapiens testis-specific
poly(A)-binding protein protein.
Length = 631
Score = 161 bits (390), Expect = 3e-39
Identities = 100/221 (45%), Positives = 120/221 (54%), Gaps = 16/221 (7%)
Frame = +3
Query: 30 QPSSAGGYFVPTIPPAQR---FYGPAQMPQIRPTPRWTAQPPVRPSTQTPASAYANMQXX 200
Q + GYF+ +P Q +Y P+Q+ ++RP+PRWTAQ Q SA
Sbjct: 395 QRAPPSGYFMTAVPQTQNHAAYYPPSQIARLRPSPRWTAQGARPHPFQNKPSAIRPGAPR 454
Query: 201 XXXXXXXXXXXXXXTSLGARPI--TGQQGVAGTAGSIRAPLVTQSSRPAG-YKYTANMRN 371
+ + + T Q V + RA T + R YKY A +RN
Sbjct: 455 VPFSTMRPASSQVPRVMSTQRVANTSTQTVGPRPAAARAAAATPAVRTVPRYKYAAGVRN 514
Query: 372 PPA---PQP-------AVHIQGQEXXXXXXXXXXXXQEQKQMLGERLFPLIQRMHPDLAG 521
P QP AVH+QGQE Q+QKQMLGERLFPLIQ MHP LAG
Sbjct: 515 PQQHRNAQPQVTMQQLAVHVQGQETLTASRLASAPPQKQKQMLGERLFPLIQAMHPTLAG 574
Query: 522 KITGMLLEIDNSELLHMLEHGESLKAKVDEAVAVLQAHQAK 644
KITGMLLEIDNSELL+MLE ESL++KVDEAVAVLQAHQAK
Sbjct: 575 KITGMLLEIDNSELLYMLESPESLRSKVDEAVAVLQAHQAK 615
>DQ120640-1|ABB92425.1| 630|Homo sapiens PABP3 protein.
Length = 630
Score = 158 bits (384), Expect = 1e-38
Identities = 99/221 (44%), Positives = 119/221 (53%), Gaps = 16/221 (7%)
Frame = +3
Query: 30 QPSSAGGYFVPTIPPAQR---FYGPAQMPQIRPTPRWTAQPPVRPSTQTPASAYANMQXX 200
Q + GYF+ +P Q +Y P+Q+ ++RP+PRWTAQ Q SA
Sbjct: 395 QRAPPSGYFMTAVPQTQNHAAYYPPSQIARLRPSPRWTAQGARPHPFQNKPSAIRPGAPR 454
Query: 201 XXXXXXXXXXXXXXTSLGARPI--TGQQGVAGTAGSIRAPLVTQSSRPAG-YKYTANMRN 371
+ + + T Q V + A T + R YKY A +RN
Sbjct: 455 VPFSTMRPASSQVPRVMSTQRVANTSTQTVGPRPAAAAAAAATPAVRTVPRYKYAAGVRN 514
Query: 372 PPA---PQP-------AVHIQGQEXXXXXXXXXXXXQEQKQMLGERLFPLIQRMHPDLAG 521
P QP AVH+QGQE Q+QKQMLGERLFPLIQ MHP LAG
Sbjct: 515 PQQHRNAQPQVTMQQLAVHVQGQETLTASRLASAPPQKQKQMLGERLFPLIQAMHPTLAG 574
Query: 522 KITGMLLEIDNSELLHMLEHGESLKAKVDEAVAVLQAHQAK 644
KITGMLLEIDNSELL+MLE ESL++KVDEAVAVLQAHQAK
Sbjct: 575 KITGMLLEIDNSELLYMLESPESLRSKVDEAVAVLQAHQAK 615
>BC027617-1|AAH27617.1| 631|Homo sapiens poly(A) binding protein,
cytoplasmic 3 protein.
Length = 631
Score = 158 bits (384), Expect = 1e-38
Identities = 99/221 (44%), Positives = 119/221 (53%), Gaps = 16/221 (7%)
Frame = +3
Query: 30 QPSSAGGYFVPTIPPAQR---FYGPAQMPQIRPTPRWTAQPPVRPSTQTPASAYANMQXX 200
Q + GYF+ +P Q +Y P+Q+ ++RP+PRWTAQ Q SA
Sbjct: 395 QRAPPSGYFMTAVPQTQNHAAYYPPSQIARLRPSPRWTAQGARPHPFQNKPSAIRPGAPR 454
Query: 201 XXXXXXXXXXXXXXTSLGARPI--TGQQGVAGTAGSIRAPLVTQSSRPAG-YKYTANMRN 371
+ + + T Q V + A T + R YKY A +RN
Sbjct: 455 VPFSTMRPASSQVPRVMSTQRVANTSTQTVGPRPAAAAAAAATPAVRTVPRYKYAAGVRN 514
Query: 372 PPA---PQP-------AVHIQGQEXXXXXXXXXXXXQEQKQMLGERLFPLIQRMHPDLAG 521
P QP AVH+QGQE Q+QKQMLGERLFPLIQ MHP LAG
Sbjct: 515 PQQHRNAQPQVTMQQLAVHVQGQETLTASRLASAPPQKQKQMLGERLFPLIQAMHPTLAG 574
Query: 522 KITGMLLEIDNSELLHMLEHGESLKAKVDEAVAVLQAHQAK 644
KITGMLLEIDNSELL+MLE ESL++KVDEAVAVLQAHQAK
Sbjct: 575 KITGMLLEIDNSELLYMLESPESLRSKVDEAVAVLQAHQAK 615
>AL359757-1|CAH70805.1| 631|Homo sapiens poly(A) binding protein,
cytoplasmic 3 protein.
Length = 631
Score = 158 bits (384), Expect = 1e-38
Identities = 99/221 (44%), Positives = 119/221 (53%), Gaps = 16/221 (7%)
Frame = +3
Query: 30 QPSSAGGYFVPTIPPAQR---FYGPAQMPQIRPTPRWTAQPPVRPSTQTPASAYANMQXX 200
Q + GYF+ +P Q +Y P+Q+ ++RP+PRWTAQ Q SA
Sbjct: 395 QRAPPSGYFMTAVPQTQNHAAYYPPSQIARLRPSPRWTAQGARPHPFQNKPSAIRPGAPR 454
Query: 201 XXXXXXXXXXXXXXTSLGARPI--TGQQGVAGTAGSIRAPLVTQSSRPAG-YKYTANMRN 371
+ + + T Q V + A T + R YKY A +RN
Sbjct: 455 VPFSTMRPASSQVPRVMSTQRVANTSTQTVGPRPAAAAAAAATPAVRTVPRYKYAAGVRN 514
Query: 372 PPA---PQP-------AVHIQGQEXXXXXXXXXXXXQEQKQMLGERLFPLIQRMHPDLAG 521
P QP AVH+QGQE Q+QKQMLGERLFPLIQ MHP LAG
Sbjct: 515 PQQHRNAQPQVTMQQLAVHVQGQETLTASRLASAPPQKQKQMLGERLFPLIQAMHPTLAG 574
Query: 522 KITGMLLEIDNSELLHMLEHGESLKAKVDEAVAVLQAHQAK 644
KITGMLLEIDNSELL+MLE ESL++KVDEAVAVLQAHQAK
Sbjct: 575 KITGMLLEIDNSELLYMLESPESLRSKVDEAVAVLQAHQAK 615
>BC045608-1|AAH45608.1| 631|Homo sapiens poly(A) binding protein,
cytoplasmic 3 protein.
Length = 631
Score = 155 bits (376), Expect = 1e-37
Identities = 98/221 (44%), Positives = 118/221 (53%), Gaps = 16/221 (7%)
Frame = +3
Query: 30 QPSSAGGYFVPTIPPAQR---FYGPAQMPQIRPTPRWTAQPPVRPSTQTPASAYANMQXX 200
Q + GYF+ + Q +Y P+Q+ ++RP+PRWTAQ Q SA
Sbjct: 395 QRAPPSGYFMTAVTQTQNHAAYYPPSQIARLRPSPRWTAQGARPHPFQNKPSAIRPGAPR 454
Query: 201 XXXXXXXXXXXXXXTSLGARPI--TGQQGVAGTAGSIRAPLVTQSSRPAG-YKYTANMRN 371
+ + + T Q V + A T + R YKY A +RN
Sbjct: 455 VPFSTMRPASSQVPRVMSTQRVANTSTQTVGPRPAAAAAAAATPAVRTVPRYKYAAGVRN 514
Query: 372 PPA---PQP-------AVHIQGQEXXXXXXXXXXXXQEQKQMLGERLFPLIQRMHPDLAG 521
P QP AVH+QGQE Q+QKQMLGERLFPLIQ MHP LAG
Sbjct: 515 PQQHRNAQPQVTMQQLAVHVQGQETLTASRLASAPPQKQKQMLGERLFPLIQAMHPTLAG 574
Query: 522 KITGMLLEIDNSELLHMLEHGESLKAKVDEAVAVLQAHQAK 644
KITGMLLEIDNSELL+MLE ESL++KVDEAVAVLQAHQAK
Sbjct: 575 KITGMLLEIDNSELLYMLESPESLRSKVDEAVAVLQAHQAK 615
>BC094755-1|AAH94755.1| 660|Homo sapiens PABPC4 protein protein.
Length = 660
Score = 143 bits (346), Expect = 5e-34
Identities = 77/121 (63%), Positives = 87/121 (71%), Gaps = 8/121 (6%)
Frame = +3
Query: 306 RAPLVTQSSRP-AGYKYTANMRNP-------PAPQPAVHIQGQEXXXXXXXXXXXXQEQK 461
RA + + R A YKY +++R+P APQPAVH+QGQE QEQK
Sbjct: 525 RAAVAAAAPRAVAPYKYASSVRSPHPAIQPLQAPQPAVHVQGQEPLTASMLAAAPPQEQK 584
Query: 462 QMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHGESLKAKVDEAVAVLQAHQA 641
QMLGERLFPLIQ MH +LAGKITGMLLEIDNSELLHMLE ESL++KVDEAVAVLQAH A
Sbjct: 585 QMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVLQAHHA 644
Query: 642 K 644
K
Sbjct: 645 K 645
Score = 48.0 bits (109), Expect = 3e-05
Identities = 22/38 (57%), Positives = 27/38 (71%), Gaps = 3/38 (7%)
Frame = +3
Query: 27 FQPSSAGGYFVPTIPPAQR---FYGPAQMPQIRPTPRW 131
FQP+ AGGYFVP +P AQ +Y P Q+ Q+RP PRW
Sbjct: 401 FQPA-AGGYFVPAVPQAQGRPPYYTPNQLAQMRPNPRW 437
>AL845289-2|CAI12298.1| 660|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducibleseudogene protein.
Length = 660
Score = 143 bits (346), Expect = 5e-34
Identities = 77/121 (63%), Positives = 87/121 (71%), Gaps = 8/121 (6%)
Frame = +3
Query: 306 RAPLVTQSSRP-AGYKYTANMRNP-------PAPQPAVHIQGQEXXXXXXXXXXXXQEQK 461
RA + + R A YKY +++R+P APQPAVH+QGQE QEQK
Sbjct: 525 RAAVAAAAPRAVAPYKYASSVRSPHPAIQPLQAPQPAVHVQGQEPLTASMLAAAPPQEQK 584
Query: 462 QMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHGESLKAKVDEAVAVLQAHQA 641
QMLGERLFPLIQ MH +LAGKITGMLLEIDNSELLHMLE ESL++KVDEAVAVLQAH A
Sbjct: 585 QMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVLQAHHA 644
Query: 642 K 644
K
Sbjct: 645 K 645
Score = 48.0 bits (109), Expect = 3e-05
Identities = 22/38 (57%), Positives = 27/38 (71%), Gaps = 3/38 (7%)
Frame = +3
Query: 27 FQPSSAGGYFVPTIPPAQR---FYGPAQMPQIRPTPRW 131
FQP+ AGGYFVP +P AQ +Y P Q+ Q+RP PRW
Sbjct: 401 FQPA-AGGYFVPAVPQAQGRPPYYTPNQLAQMRPNPRW 437
>AL365277-13|CAI16423.1| 194|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (induciblela) protein.
Length = 194
Score = 143 bits (346), Expect = 5e-34
Identities = 77/121 (63%), Positives = 87/121 (71%), Gaps = 8/121 (6%)
Frame = +3
Query: 306 RAPLVTQSSRP-AGYKYTANMRNP-------PAPQPAVHIQGQEXXXXXXXXXXXXQEQK 461
RA + + R A YKY +++R+P APQPAVH+QGQE QEQK
Sbjct: 63 RAAVAAAAPRAVAPYKYASSVRSPHPAIQPLQAPQPAVHVQGQEPLTASMLAAAPPQEQK 122
Query: 462 QMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHGESLKAKVDEAVAVLQAHQA 641
QMLGERLFPLIQ MH +LAGKITGMLLEIDNSELLHMLE ESL++KVDEAVAVLQAH A
Sbjct: 123 QMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVLQAHHA 182
Query: 642 K 644
K
Sbjct: 183 K 183
>AL365277-3|CAI16412.1| 660|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducible) pseudogene protein.
Length = 660
Score = 143 bits (346), Expect = 5e-34
Identities = 77/121 (63%), Positives = 87/121 (71%), Gaps = 8/121 (6%)
Frame = +3
Query: 306 RAPLVTQSSRP-AGYKYTANMRNP-------PAPQPAVHIQGQEXXXXXXXXXXXXQEQK 461
RA + + R A YKY +++R+P APQPAVH+QGQE QEQK
Sbjct: 525 RAAVAAAAPRAVAPYKYASSVRSPHPAIQPLQAPQPAVHVQGQEPLTASMLAAAPPQEQK 584
Query: 462 QMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHGESLKAKVDEAVAVLQAHQA 641
QMLGERLFPLIQ MH +LAGKITGMLLEIDNSELLHMLE ESL++KVDEAVAVLQAH A
Sbjct: 585 QMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVLQAHHA 644
Query: 642 K 644
K
Sbjct: 645 K 645
Score = 48.0 bits (109), Expect = 3e-05
Identities = 22/38 (57%), Positives = 27/38 (71%), Gaps = 3/38 (7%)
Frame = +3
Query: 27 FQPSSAGGYFVPTIPPAQR---FYGPAQMPQIRPTPRW 131
FQP+ AGGYFVP +P AQ +Y P Q+ Q+RP PRW
Sbjct: 401 FQPA-AGGYFVPAVPQAQGRPPYYTPNQLAQMRPNPRW 437
>AB208962-1|BAD92199.1| 358|Homo sapiens PABPC4 protein variant
protein.
Length = 358
Score = 143 bits (346), Expect = 5e-34
Identities = 77/121 (63%), Positives = 87/121 (71%), Gaps = 8/121 (6%)
Frame = +3
Query: 306 RAPLVTQSSRP-AGYKYTANMRNP-------PAPQPAVHIQGQEXXXXXXXXXXXXQEQK 461
RA + + R A YKY +++R+P APQPAVH+QGQE QEQK
Sbjct: 223 RAAVAAAAPRAVAPYKYASSVRSPHPAIQPLQAPQPAVHVQGQEPLTASMLAAAPPQEQK 282
Query: 462 QMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHGESLKAKVDEAVAVLQAHQA 641
QMLGERLFPLIQ MH +LAGKITGMLLEIDNSELLHMLE ESL++KVDEAVAVLQAH A
Sbjct: 283 QMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVLQAHHA 342
Query: 642 K 644
K
Sbjct: 343 K 343
Score = 48.0 bits (109), Expect = 3e-05
Identities = 22/38 (57%), Positives = 27/38 (71%), Gaps = 3/38 (7%)
Frame = +3
Query: 27 FQPSSAGGYFVPTIPPAQR---FYGPAQMPQIRPTPRW 131
FQP+ AGGYFVP +P AQ +Y P Q+ Q+RP PRW
Sbjct: 99 FQPA-AGGYFVPAVPQAQGRPPYYTPNQLAQMRPNPRW 135
>BC071591-1|AAH71591.1| 660|Homo sapiens PABPC4 protein protein.
Length = 660
Score = 142 bits (345), Expect = 7e-34
Identities = 77/121 (63%), Positives = 86/121 (71%), Gaps = 8/121 (6%)
Frame = +3
Query: 306 RAPLVTQSSRP-AGYKYTANMRNP-------PAPQPAVHIQGQEXXXXXXXXXXXXQEQK 461
RA + + R A YKY +++R P APQPAVH+QGQE QEQK
Sbjct: 525 RAAVAAAAPRAVAPYKYASSVRGPHPAIQPLQAPQPAVHVQGQEPLTASMLAAAPPQEQK 584
Query: 462 QMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHGESLKAKVDEAVAVLQAHQA 641
QMLGERLFPLIQ MH +LAGKITGMLLEIDNSELLHMLE ESL++KVDEAVAVLQAH A
Sbjct: 585 QMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVLQAHHA 644
Query: 642 K 644
K
Sbjct: 645 K 645
Score = 48.0 bits (109), Expect = 3e-05
Identities = 22/38 (57%), Positives = 27/38 (71%), Gaps = 3/38 (7%)
Frame = +3
Query: 27 FQPSSAGGYFVPTIPPAQR---FYGPAQMPQIRPTPRW 131
FQP+ AGGYFVP +P AQ +Y P Q+ Q+RP PRW
Sbjct: 401 FQPA-AGGYFVPAVPQAQGRPPYYTPNQLAQMRPNPRW 437
>AL109839-1|CAI95631.1| 614|Homo sapiens chromosome 20 open reading
frame 119 protein.
Length = 614
Score = 142 bits (343), Expect = 1e-33
Identities = 95/222 (42%), Positives = 119/222 (53%), Gaps = 13/222 (5%)
Frame = +3
Query: 15 MGQIFQPSSAGGYFVPTIP--PAQR-FYGPAQMPQIRPTPRWTAQPP-------VRPST- 161
+G QPSS YF+P +P PAQ +YG + +P PRWT+QPP VRP
Sbjct: 397 LGSFQQPSS---YFLPAMPQPPAQAAYYGCGPVTPTQPAPRWTSQPPRPSCASMVRPPVV 453
Query: 162 -QTPASAYANMQXXXXXXXXXXXXXXXXTSLGARPITGQQGVAG-TAGSIRAPLVTQSSR 335
+ P + ++++ ++G + TG GV T G P S+
Sbjct: 454 PRRPPAHISSVRQASTQVPRTVPHTQRVANIGTQT-TGPSGVGCCTPGRPLLPCKCSSAA 512
Query: 336 PAGYKYTANMRNPPAPQPAVHIQGQEXXXXXXXXXXXXQEQKQMLGERLFPLIQRMHPDL 515
+ Y+ +PAVHI GQE EQKQM+GERL+PLI +H L
Sbjct: 513 HSTYR---------VQEPAVHIPGQEPLTASMLAAAPLHEQKQMIGERLYPLIHDVHTQL 563
Query: 516 AGKITGMLLEIDNSELLHMLEHGESLKAKVDEAVAVLQAHQA 641
AGKITGMLLEIDNSELL MLE ESL AK+DEAVAVLQAHQA
Sbjct: 564 AGKITGMLLEIDNSELLLMLESPESLHAKIDEAVAVLQAHQA 605
>AL008725-4|CAI95662.1| 614|Homo sapiens chromosome 20 open reading
frame 119 protein.
Length = 614
Score = 142 bits (343), Expect = 1e-33
Identities = 95/222 (42%), Positives = 119/222 (53%), Gaps = 13/222 (5%)
Frame = +3
Query: 15 MGQIFQPSSAGGYFVPTIP--PAQR-FYGPAQMPQIRPTPRWTAQPP-------VRPST- 161
+G QPSS YF+P +P PAQ +YG + +P PRWT+QPP VRP
Sbjct: 397 LGSFQQPSS---YFLPAMPQPPAQAAYYGCGPVTPTQPAPRWTSQPPRPSCASMVRPPVV 453
Query: 162 -QTPASAYANMQXXXXXXXXXXXXXXXXTSLGARPITGQQGVAG-TAGSIRAPLVTQSSR 335
+ P + ++++ ++G + TG GV T G P S+
Sbjct: 454 PRRPPAHISSVRQASTQVPRTVPHTQRVANIGTQT-TGPSGVGCCTPGRPLLPCKCSSAA 512
Query: 336 PAGYKYTANMRNPPAPQPAVHIQGQEXXXXXXXXXXXXQEQKQMLGERLFPLIQRMHPDL 515
+ Y+ +PAVHI GQE EQKQM+GERL+PLI +H L
Sbjct: 513 HSTYR---------VQEPAVHIPGQEPLTASMLAAAPLHEQKQMIGERLYPLIHDVHTQL 563
Query: 516 AGKITGMLLEIDNSELLHMLEHGESLKAKVDEAVAVLQAHQA 641
AGKITGMLLEIDNSELL MLE ESL AK+DEAVAVLQAHQA
Sbjct: 564 AGKITGMLLEIDNSELLLMLESPESLHAKIDEAVAVLQAHQA 605
>AK222917-1|BAD96637.1| 371|Homo sapiens PABPC4 protein variant
protein.
Length = 371
Score = 141 bits (342), Expect = 2e-33
Identities = 76/121 (62%), Positives = 86/121 (71%), Gaps = 8/121 (6%)
Frame = +3
Query: 306 RAPLVTQSSRP-AGYKYTANMRNP-------PAPQPAVHIQGQEXXXXXXXXXXXXQEQK 461
RA + + R A YKY +++R+P APQPAVH+QGQE QEQK
Sbjct: 236 RAAVAAAAPRAVAPYKYASSVRSPHPAIQPLQAPQPAVHVQGQEPLTASMLAAAPPQEQK 295
Query: 462 QMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHGESLKAKVDEAVAVLQAHQA 641
QMLGERLFPLIQ MH +LAGKITGMLLEIDNSELLHMLE ESL++KVDEA AVLQAH A
Sbjct: 296 QMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAAAVLQAHHA 355
Query: 642 K 644
K
Sbjct: 356 K 356
Score = 48.0 bits (109), Expect = 3e-05
Identities = 22/38 (57%), Positives = 27/38 (71%), Gaps = 3/38 (7%)
Frame = +3
Query: 27 FQPSSAGGYFVPTIPPAQR---FYGPAQMPQIRPTPRW 131
FQP+ AGGYFVP +P AQ +Y P Q+ Q+RP PRW
Sbjct: 112 FQPA-AGGYFVPAVPQAQGRPPYYTPNQLAQMRPNPRW 148
>Z48501-1|CAA88401.1| 522|Homo sapiens polyadenylate binding
protein II protein.
Length = 522
Score = 138 bits (334), Expect = 2e-32
Identities = 68/88 (77%), Positives = 71/88 (80%)
Frame = +3
Query: 381 PQPAVHIQGQEXXXXXXXXXXXXQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSE 560
P PAVH+QGQE QEQKQMLGERLFPLIQ MHP LAGKITGMLLEIDNSE
Sbjct: 419 PHPAVHVQGQEPLTASMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSE 478
Query: 561 LLHMLEHGESLKAKVDEAVAVLQAHQAK 644
LLHMLE ESL++KVDEAVAVLQAHQAK
Sbjct: 479 LLHMLESPESLRSKVDEAVAVLQAHQAK 506
Score = 50.4 bits (115), Expect = 5e-06
Identities = 25/59 (42%), Positives = 34/59 (57%), Gaps = 8/59 (13%)
Frame = +3
Query: 27 FQPSSAGGYFVPTIPPAQR---FYGPAQMPQIRPTPRWTAQ-----PPVRPSTQTPASA 179
+QP+ GYF+ IP Q +Y P+Q+ Q+RP+PRWTAQ P V Q P +A
Sbjct: 375 YQPAPPSGYFIAAIPQTQNRAAYYPPSQIAQLRPSPRWTAQGARPHPAVHVQGQEPLTA 433
>AK127880-1|BAC87174.1| 146|Homo sapiens protein ( Homo sapiens
cDNA FLJ45986 fis, clone PUAEN2000594, highly similar
to Polyadenylate-binding protein 1. ).
Length = 146
Score = 126 bits (305), Expect = 5e-29
Identities = 70/110 (63%), Positives = 76/110 (69%), Gaps = 10/110 (9%)
Frame = +3
Query: 345 YKYTANMRNPP----------APQPAVHIQGQEXXXXXXXXXXXXQEQKQMLGERLFPLI 494
YKY A + NP QPA+H+QGQE QEQKQMLGE LFPLI
Sbjct: 22 YKYAAGVCNPQQHLNAQPQVTVQQPAIHVQGQEPLTVSMLASAP-QEQKQMLGEWLFPLI 80
Query: 495 QRMHPDLAGKITGMLLEIDNSELLHMLEHGESLKAKVDEAVAVLQAHQAK 644
Q MHP LAGKITG+LLEIDNSELLHML+ ESL +KVDEAVAVLQAHQAK
Sbjct: 81 QAMHPTLAGKITGVLLEIDNSELLHMLKSPESLHSKVDEAVAVLQAHQAK 130
>AL109839-10|CAI95639.1| 168|Homo sapiens chromosome 20 open
reading frame 119 protein.
Length = 168
Score = 117 bits (281), Expect = 4e-26
Identities = 59/86 (68%), Positives = 64/86 (74%)
Frame = +3
Query: 384 QPAVHIQGQEXXXXXXXXXXXXQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSEL 563
+PAVHI GQE EQKQM+GERL+PLI +H LAGKITGMLLEIDNSEL
Sbjct: 74 EPAVHIPGQEPLTASMLAAAPLHEQKQMIGERLYPLIHDVHTQLAGKITGMLLEIDNSEL 133
Query: 564 LHMLEHGESLKAKVDEAVAVLQAHQA 641
L MLE ESL AK+DEAVAVLQAHQA
Sbjct: 134 LLMLESPESLHAKIDEAVAVLQAHQA 159
>AL109839-8|CAI95637.1| 149|Homo sapiens chromosome 20 open reading
frame 119 protein.
Length = 149
Score = 94.3 bits (224), Expect = 3e-19
Identities = 47/74 (63%), Positives = 52/74 (70%)
Frame = +3
Query: 384 QPAVHIQGQEXXXXXXXXXXXXQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSEL 563
+PAVHI GQE EQKQM+GERL+PLI +H LAGKITGMLLEIDNSEL
Sbjct: 74 EPAVHIPGQEPLTASMLAAAPLHEQKQMIGERLYPLIHDVHTQLAGKITGMLLEIDNSEL 133
Query: 564 LHMLEHGESLKAKV 605
L MLE ESL AK+
Sbjct: 134 LLMLESPESLHAKI 147
>AL109839-9|CAI95638.1| 171|Homo sapiens chromosome 20 open reading
frame 119 protein.
Length = 171
Score = 93.1 bits (221), Expect = 8e-19
Identities = 47/73 (64%), Positives = 51/73 (69%)
Frame = +3
Query: 384 QPAVHIQGQEXXXXXXXXXXXXQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSEL 563
+PAVHI GQE EQKQM+GERL+PLI +H LAGKITGMLLEIDNSEL
Sbjct: 74 EPAVHIPGQEPLTASMLAAAPLHEQKQMIGERLYPLIHDVHTQLAGKITGMLLEIDNSEL 133
Query: 564 LHMLEHGESLKAK 602
L MLE ESL AK
Sbjct: 134 LLMLESPESLHAK 146
>AL109839-7|CAI95636.1| 151|Homo sapiens chromosome 20 open reading
frame 119 protein.
Length = 151
Score = 93.1 bits (221), Expect = 8e-19
Identities = 47/73 (64%), Positives = 51/73 (69%)
Frame = +3
Query: 384 QPAVHIQGQEXXXXXXXXXXXXQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSEL 563
+PAVHI GQE EQKQM+GERL+PLI +H LAGKITGMLLEIDNSEL
Sbjct: 55 EPAVHIPGQEPLTASMLAAAPLHEQKQMIGERLYPLIHDVHTQLAGKITGMLLEIDNSEL 114
Query: 564 LHMLEHGESLKAK 602
L MLE ESL AK
Sbjct: 115 LLMLESPESLHAK 127
>U95000-1|AAF88143.1| 2798|Homo sapiens hyd protein protein.
Length = 2798
Score = 66.9 bits (156), Expect = 6e-11
Identities = 31/59 (52%), Positives = 44/59 (74%)
Frame = +3
Query: 459 KQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHGESLKAKVDEAVAVLQAH 635
+Q LGERL+P +Q M P A KITGMLLE+ ++LL +L +SL+A+VDEA+ ++ AH
Sbjct: 2393 RQALGERLYPRVQAMQPAFASKITGMLLELSPAQLLLLLASEDSLRARVDEAMELIIAH 2451
>AF006010-1|AAD01259.2| 2799|Homo sapiens progestin induced protein
protein.
Length = 2799
Score = 66.9 bits (156), Expect = 6e-11
Identities = 31/59 (52%), Positives = 44/59 (74%)
Frame = +3
Query: 459 KQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHGESLKAKVDEAVAVLQAH 635
+Q LGERL+P +Q M P A KITGMLLE+ ++LL +L +SL+A+VDEA+ ++ AH
Sbjct: 2394 RQALGERLYPRVQAMQPAFASKITGMLLELSPAQLLLLLASEDSLRARVDEAMELIIAH 2452
>AB020703-1|BAA74919.3| 2820|Homo sapiens KIAA0896 protein protein.
Length = 2820
Score = 66.9 bits (156), Expect = 6e-11
Identities = 31/59 (52%), Positives = 44/59 (74%)
Frame = +3
Query: 459 KQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHGESLKAKVDEAVAVLQAH 635
+Q LGERL+P +Q M P A KITGMLLE+ ++LL +L +SL+A+VDEA+ ++ AH
Sbjct: 2416 RQALGERLYPRVQAMQPAFASKITGMLLELSPAQLLLLLASEDSLRARVDEAMELIIAH 2474
>BC118568-1|AAI18569.1| 252|Homo sapiens PABPC4 protein protein.
Length = 252
Score = 48.0 bits (109), Expect = 3e-05
Identities = 22/38 (57%), Positives = 27/38 (71%), Gaps = 3/38 (7%)
Frame = +3
Query: 27 FQPSSAGGYFVPTIPPAQR---FYGPAQMPQIRPTPRW 131
FQP+ AGGYFVP +P AQ +Y P Q+ Q+RP PRW
Sbjct: 151 FQPA-AGGYFVPAVPQAQGRPPYYTPNQLAQMRPNPRW 187
>BC106908-1|AAI06909.1| 281|Homo sapiens PABPC4 protein protein.
Length = 281
Score = 48.0 bits (109), Expect = 3e-05
Identities = 22/38 (57%), Positives = 27/38 (71%), Gaps = 3/38 (7%)
Frame = +3
Query: 27 FQPSSAGGYFVPTIPPAQR---FYGPAQMPQIRPTPRW 131
FQP+ AGGYFVP +P AQ +Y P Q+ Q+RP PRW
Sbjct: 151 FQPA-AGGYFVPAVPQAQGRPPYYTPNQLAQMRPNPRW 187
>BC068242-1|AAH68242.1| 269|Homo sapiens LOC728773 protein protein.
Length = 269
Score = 41.1 bits (92), Expect = 0.003
Identities = 20/46 (43%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Frame = +3
Query: 27 FQPSSAGGYFVPTIPPAQR---FYGPAQMPQIRPTPRWTAQPPVRP 155
+QP+ + YFV IP Q +Y P Q+ Q+RP+P W Q VRP
Sbjct: 220 YQPAPSTCYFVAAIPQTQNRAAYYPPGQIAQLRPSPPWAVQ-SVRP 264
>BX537907-1|CAD97892.1| 372|Homo sapiens hypothetical protein
protein.
Length = 372
Score = 36.3 bits (80), Expect = 0.093
Identities = 17/45 (37%), Positives = 23/45 (51%)
Frame = +3
Query: 60 PTIPPAQRFYGPAQMPQIRPTPRWTAQPPVRPSTQTPASAYANMQ 194
PT PPAQ P P P+ +A PP P+T+ P S ++Q
Sbjct: 327 PTEPPAQSSTEPPAEPPTAPSAELSAGPPAEPATEPPPSPGHSLQ 371
>BC012055-1|AAH12055.1| 384|Homo sapiens aryl hydrocarbon receptor
interacting protein-like 1 protein.
Length = 384
Score = 36.3 bits (80), Expect = 0.093
Identities = 17/45 (37%), Positives = 23/45 (51%)
Frame = +3
Query: 60 PTIPPAQRFYGPAQMPQIRPTPRWTAQPPVRPSTQTPASAYANMQ 194
PT PPAQ P P P+ +A PP P+T+ P S ++Q
Sbjct: 339 PTEPPAQSSTEPPAEPPTAPSAELSAGPPAEPATEPPPSPGHSLQ 383
>AK023970-1|BAB14744.1| 384|Homo sapiens protein ( Homo sapiens
cDNA FLJ13908 fis, clone Y79AA1000059, highly similar to
Homo sapiens aryl-hydrocarbon interacting protein-like 1
(AIPL1) gene. ).
Length = 384
Score = 36.3 bits (80), Expect = 0.093
Identities = 17/45 (37%), Positives = 23/45 (51%)
Frame = +3
Query: 60 PTIPPAQRFYGPAQMPQIRPTPRWTAQPPVRPSTQTPASAYANMQ 194
PT PPAQ P P P+ +A PP P+T+ P S ++Q
Sbjct: 339 PTEPPAQSSTEPPAEPPTAPSAELSAGPPAEPATEPPPSPGHSLQ 383
>AJ830743-1|CAH25996.1| 360|Homo sapiens aryl hydrocarbon receptor
interacting protein-like 1 protein.
Length = 360
Score = 36.3 bits (80), Expect = 0.093
Identities = 17/45 (37%), Positives = 23/45 (51%)
Frame = +3
Query: 60 PTIPPAQRFYGPAQMPQIRPTPRWTAQPPVRPSTQTPASAYANMQ 194
PT PPAQ P P P+ +A PP P+T+ P S ++Q
Sbjct: 315 PTEPPAQSSTEPPAEPPTAPSAELSAGPPAEPATEPPPSPGHSLQ 359
>AJ830742-1|CAH25995.1| 362|Homo sapiens aryl hydrocarbon receptor
interacting protein-like 1 protein.
Length = 362
Score = 36.3 bits (80), Expect = 0.093
Identities = 17/45 (37%), Positives = 23/45 (51%)
Frame = +3
Query: 60 PTIPPAQRFYGPAQMPQIRPTPRWTAQPPVRPSTQTPASAYANMQ 194
PT PPAQ P P P+ +A PP P+T+ P S ++Q
Sbjct: 317 PTEPPAQSSTEPPAEPPTAPSAELSAGPPAEPATEPPPSPGHSLQ 361
>AJ633678-1|CAG17883.1| 321|Homo sapiens aryl hydrocarbon receptor
interacting protein-like 1 protein.
Length = 321
Score = 36.3 bits (80), Expect = 0.093
Identities = 17/45 (37%), Positives = 23/45 (51%)
Frame = +3
Query: 60 PTIPPAQRFYGPAQMPQIRPTPRWTAQPPVRPSTQTPASAYANMQ 194
PT PPAQ P P P+ +A PP P+T+ P S ++Q
Sbjct: 276 PTEPPAQSSTEPPAEPPTAPSAELSAGPPAEPATEPPPSPGHSLQ 320
>AJ633677-1|CAG17882.1| 324|Homo sapiens aryl hydrocarbon receptor
interacting protein-like 1 protein.
Length = 324
Score = 36.3 bits (80), Expect = 0.093
Identities = 17/45 (37%), Positives = 23/45 (51%)
Frame = +3
Query: 60 PTIPPAQRFYGPAQMPQIRPTPRWTAQPPVRPSTQTPASAYANMQ 194
PT PPAQ P P P+ +A PP P+T+ P S ++Q
Sbjct: 279 PTEPPAQSSTEPPAEPPTAPSAELSAGPPAEPATEPPPSPGHSLQ 323
>AF525970-1|AAM88405.1| 321|Homo sapiens aryl hydrocarbon
receptor-interacting protein-like 2 protein.
Length = 321
Score = 36.3 bits (80), Expect = 0.093
Identities = 17/45 (37%), Positives = 23/45 (51%)
Frame = +3
Query: 60 PTIPPAQRFYGPAQMPQIRPTPRWTAQPPVRPSTQTPASAYANMQ 194
PT PPAQ P P P+ +A PP P+T+ P S ++Q
Sbjct: 276 PTEPPAQSSTEPPAEPPTAPSAELSAGPPAEPATEPPPSPGHSLQ 320
>AF180472-1|AAF26708.1| 384|Homo sapiens aryl-hydrocarbon
interacting protein-like 1 protein.
Length = 384
Score = 36.3 bits (80), Expect = 0.093
Identities = 17/45 (37%), Positives = 23/45 (51%)
Frame = +3
Query: 60 PTIPPAQRFYGPAQMPQIRPTPRWTAQPPVRPSTQTPASAYANMQ 194
PT PPAQ P P P+ +A PP P+T+ P S ++Q
Sbjct: 339 PTEPPAQSSTEPPAEPPTAPSAELSAGPPAEPATEPPPSPGHSLQ 383
>AF148864-1|AAF74023.1| 384|Homo sapiens aryl-hydrocarbon
interacting protein-like-1 protein.
Length = 384
Score = 36.3 bits (80), Expect = 0.093
Identities = 17/45 (37%), Positives = 23/45 (51%)
Frame = +3
Query: 60 PTIPPAQRFYGPAQMPQIRPTPRWTAQPPVRPSTQTPASAYANMQ 194
PT PPAQ P P P+ +A PP P+T+ P S ++Q
Sbjct: 339 PTEPPAQSSTEPPAEPPTAPSAELSAGPPAEPATEPPPSPGHSLQ 383
>BC030578-1|AAH30578.1| 515|Homo sapiens EIF4G3 protein protein.
Length = 515
Score = 34.3 bits (75), Expect = 0.38
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Frame = +3
Query: 30 QPSSAGGYFVPTIPPAQRFYGPAQMPQIRPTPRWT---AQPPVRPSTQTPASAY 182
QP + + PP +F+ Q PQI+P PR T + P +RP QTP + Y
Sbjct: 4 QPQTRSPFAAGPRPPHHQFF---QRPQIQP-PRATIPNSSPSIRPGAQTPTAVY 53
>AL672037-2|CAI16194.1| 630|Homo sapiens eukaryotic translation
initiation factor 4 gamma,udogene 1 protein.
Length = 630
Score = 34.3 bits (75), Expect = 0.38
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Frame = +3
Query: 30 QPSSAGGYFVPTIPPAQRFYGPAQMPQIRPTPRWT---AQPPVRPSTQTPASAY 182
QP + + PP +F+ Q PQI+P PR T + P +RP QTP + Y
Sbjct: 119 QPQTRSPFAAGPRPPHHQFF---QRPQIQP-PRATIPNSSPSIRPGAQTPTAVY 168
>AL627311-1|CAI14552.1| 630|Homo sapiens eukaryotic translation
initiation factor 4 gamma,-Asp/His) box polypeptide 11 (
protein.
Length = 630
Score = 34.3 bits (75), Expect = 0.38
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Frame = +3
Query: 30 QPSSAGGYFVPTIPPAQRFYGPAQMPQIRPTPRWT---AQPPVRPSTQTPASAY 182
QP + + PP +F+ Q PQI+P PR T + P +RP QTP + Y
Sbjct: 119 QPQTRSPFAAGPRPPHHQFF---QRPQIQP-PRATIPNSSPSIRPGAQTPTAVY 168
>AL358392-1|CAI12154.1| 630|Homo sapiens eukaryotic translation
initiation factor 4 gamma,e protein.
Length = 630
Score = 34.3 bits (75), Expect = 0.38
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Frame = +3
Query: 30 QPSSAGGYFVPTIPPAQRFYGPAQMPQIRPTPRWT---AQPPVRPSTQTPASAY 182
QP + + PP +F+ Q PQI+P PR T + P +RP QTP + Y
Sbjct: 119 QPQTRSPFAAGPRPPHHQFF---QRPQIQP-PRATIPNSSPSIRPGAQTPTAVY 168
>BT007367-1|AAP36031.1| 868|Homo sapiens programmed cell death 6
interacting protein protein.
Length = 868
Score = 33.1 bits (72), Expect = 0.87
Identities = 19/50 (38%), Positives = 26/50 (52%)
Frame = +3
Query: 27 FQPSSAGGYFVPTIPPAQRFYGPAQMPQIRPTPRWTAQPPVRPSTQTPAS 176
+Q S AGG+ PT PP P MP +P P PPV P+ + P++
Sbjct: 727 YQSSPAGGH-APT-PPTP---APRTMPPTKPQPPARPPPPVLPANRAPSA 771
>BC068454-1|AAH68454.1| 873|Homo sapiens PDCD6IP protein protein.
Length = 873
Score = 33.1 bits (72), Expect = 0.87
Identities = 19/50 (38%), Positives = 26/50 (52%)
Frame = +3
Query: 27 FQPSSAGGYFVPTIPPAQRFYGPAQMPQIRPTPRWTAQPPVRPSTQTPAS 176
+Q S AGG+ PT PP P MP +P P PPV P+ + P++
Sbjct: 732 YQSSPAGGH-APT-PPTP---APRTMPPTKPQPPARPPPPVLPANRAPSA 776
>BC020066-1|AAH20066.1| 868|Homo sapiens programmed cell death 6
interacting protein protein.
Length = 868
Score = 33.1 bits (72), Expect = 0.87
Identities = 19/50 (38%), Positives = 26/50 (52%)
Frame = +3
Query: 27 FQPSSAGGYFVPTIPPAQRFYGPAQMPQIRPTPRWTAQPPVRPSTQTPAS 176
+Q S AGG+ PT PP P MP +P P PPV P+ + P++
Sbjct: 727 YQSSPAGGH-APT-PPTP---APRTMPPTKPQPPARPPPPVLPANRAPSA 771
>AK002122-1|BAA92092.1| 617|Homo sapiens protein ( Homo sapiens
cDNA FLJ11260 fis, clone PLACE1009060, weakly similar to
BRO1 PROTEIN. ).
Length = 617
Score = 33.1 bits (72), Expect = 0.87
Identities = 19/50 (38%), Positives = 26/50 (52%)
Frame = +3
Query: 27 FQPSSAGGYFVPTIPPAQRFYGPAQMPQIRPTPRWTAQPPVRPSTQTPAS 176
+Q S AGG+ PT PP P MP +P P PPV P+ + P++
Sbjct: 476 YQSSPAGGH-APT-PPTP---APRTMPPTKPQPPARPPPPVLPANRAPSA 520
>AF349951-1|AAK20398.1| 868|Homo sapiens HP95 protein.
Length = 868
Score = 33.1 bits (72), Expect = 0.87
Identities = 19/50 (38%), Positives = 26/50 (52%)
Frame = +3
Query: 27 FQPSSAGGYFVPTIPPAQRFYGPAQMPQIRPTPRWTAQPPVRPSTQTPAS 176
+Q S AGG+ PT PP P MP +P P PPV P+ + P++
Sbjct: 727 YQSSPAGGH-APT-PPTP---APRTMPPTKPQPPARPPPPVLPANRAPSA 771
>AB037796-1|BAA92613.1| 546|Homo sapiens KIAA1375 protein protein.
Length = 546
Score = 33.1 bits (72), Expect = 0.87
Identities = 19/50 (38%), Positives = 26/50 (52%)
Frame = +3
Query: 27 FQPSSAGGYFVPTIPPAQRFYGPAQMPQIRPTPRWTAQPPVRPSTQTPAS 176
+Q S AGG+ PT PP P MP +P P PPV P+ + P++
Sbjct: 405 YQSSPAGGH-APT-PPTP---APRTMPPTKPQPPARPPPPVLPANRAPSA 449
>AL109839-6|CAI95635.1| 134|Homo sapiens chromosome 20 open reading
frame 119 protein.
Length = 134
Score = 31.9 bits (69), Expect = 2.0
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = +3
Query: 384 QPAVHIQGQEXXXXXXXXXXXXQEQKQMLG 473
+PAVHI GQE EQKQM+G
Sbjct: 15 EPAVHIPGQEPLTASMLAAAPLHEQKQMIG 44
>BC082241-1|AAH82241.1| 1179|Homo sapiens USP19 protein protein.
Length = 1179
Score = 31.1 bits (67), Expect = 3.5
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +3
Query: 75 AQRFYGPAQMPQIRPTPRWTAQPPVRPSTQTPASAYANMQ 194
A + GP Q P++ PT TA P+ PA Y+NM+
Sbjct: 1139 ASQGLGPGQAPEVAPTR--TAPERFAPTVDRPAPTYSNME 1176
>AB209510-1|BAD92747.1| 964|Homo sapiens EBNA-2 co-activator
variant protein.
Length = 964
Score = 31.1 bits (67), Expect = 3.5
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +3
Query: 60 PTIPPAQRFYGPA-QMPQIRPTPRWTAQPPVRPSTQTPASAYANM 191
P+ PP+ PA ++ + PTP T PPVRP+ A A +M
Sbjct: 11 PSRPPSAAGSQPAPRLDSLSPTPTPTLTPPVRPAAPLVAFASPHM 55
>AF250394-1|AAQ14260.1| 868|Homo sapiens dopamine receptor
interacting protein 4 protein.
Length = 868
Score = 30.7 bits (66), Expect = 4.6
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +3
Query: 27 FQPSSAGGYFVPTIPPAQRFYGPAQMPQIRPTPRWTAQPPVRPSTQTPAS 176
+Q AGG+ PT PP P MP +P P PPV P+ + P++
Sbjct: 727 YQSLPAGGH-APT-PPTP---APRTMPPTKPQPPARPPPPVLPANRAPSA 771
>AF151793-1|AAF08220.1| 868|Homo sapiens ALG-2 interacting protein
1 protein.
Length = 868
Score = 30.7 bits (66), Expect = 4.6
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +3
Query: 27 FQPSSAGGYFVPTIPPAQRFYGPAQMPQIRPTPRWTAQPPVRPSTQTPAS 176
+Q AGG+ PT PP P MP +P P PPV P+ + P++
Sbjct: 727 YQSLPAGGH-APT-PPTP---APRTMPPTKPQPPARPPPPVLPANRAPSA 771
>DQ846849-1|ABI15201.1| 111|Homo sapiens dopamine D4 receptor
protein.
Length = 111
Score = 30.3 bits (65), Expect = 6.1
Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 9/58 (15%)
Frame = +3
Query: 30 QPSSAGGYFVPTI-PPAQRFYGPAQMPQIRP----TPRWTAQPPVRP----STQTPAS 176
+P+S PT+ PP F G P +RP +PR A P VRP S +TPA+
Sbjct: 2 RPASPRTPAAPTVRPPRPAFPGVPAAPTVRPPRPASPRTPAAPTVRPPRPASPRTPAA 59
Score = 30.3 bits (65), Expect = 6.1
Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 9/58 (15%)
Frame = +3
Query: 30 QPSSAGGYFVPTI-PPAQRFYGPAQMPQIRP----TPRWTAQPPVRP----STQTPAS 176
+P+S PT+ PP F G P +RP +PR A P VRP S +TPA+
Sbjct: 50 RPASPRTPAAPTVRPPRPAFPGVPAAPTVRPPRPASPRTPAAPTVRPPRPDSPRTPAA 107
>DQ314886-1|ABC40745.1| 828|Homo sapiens protein phosphatase 1,
regulatory (inhibitor) subunit 13 like protein.
Length = 828
Score = 30.3 bits (65), Expect = 6.1
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +3
Query: 93 PAQMPQIRPTPRWTAQPPVRPSTQTPA 173
P PQ +P P+ QP +P T TPA
Sbjct: 412 PQPQPQSQPQPQLPPQPQTQPQTPTPA 438
>BC142727-1|AAI42728.1| 1449|Homo sapiens USP19 protein protein.
Length = 1449
Score = 30.3 bits (65), Expect = 6.1
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +3
Query: 75 AQRFYGPAQMPQIRPTPRWTAQPPVRPSTQTPASAYANMQ 194
A + GP Q P++ PT TA P PA Y+NM+
Sbjct: 1409 ASQGLGPGQAPEVAPTR--TAPERFAPPVDRPAPTYSNME 1446
>BC142660-1|AAI42661.1| 1447|Homo sapiens USP19 protein protein.
Length = 1447
Score = 30.3 bits (65), Expect = 6.1
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +3
Query: 75 AQRFYGPAQMPQIRPTPRWTAQPPVRPSTQTPASAYANMQ 194
A + GP Q P++ PT TA P PA Y+NM+
Sbjct: 1407 ASQGLGPGQAPEVAPTR--TAPERFAPPVDRPAPTYSNME 1444
>BC106029-1|AAI06030.1| 799|Homo sapiens USP19 protein protein.
Length = 799
Score = 30.3 bits (65), Expect = 6.1
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +3
Query: 75 AQRFYGPAQMPQIRPTPRWTAQPPVRPSTQTPASAYANMQ 194
A + GP Q P++ PT TA P PA Y+NM+
Sbjct: 759 ASQGLGPGQAPEVAPTR--TAPERFAPPVDRPAPTYSNME 796
>BC064913-1|AAH64913.1| 828|Homo sapiens protein phosphatase 1,
regulatory (inhibitor) subunit 13 like protein.
Length = 828
Score = 30.3 bits (65), Expect = 6.1
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +3
Query: 93 PAQMPQIRPTPRWTAQPPVRPSTQTPA 173
P PQ +P P+ QP +P T TPA
Sbjct: 412 PQPQPQSQPQPQLPPQPQTQPQTPTPA 438
>BC048269-1|AAH48269.1| 436|Homo sapiens USP19 protein protein.
Length = 436
Score = 30.3 bits (65), Expect = 6.1
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +3
Query: 75 AQRFYGPAQMPQIRPTPRWTAQPPVRPSTQTPASAYANMQ 194
A + GP Q P++ PT TA P PA Y+NM+
Sbjct: 396 ASQGLGPGQAPEVAPTR--TAPERFAPPVDRPAPTYSNME 433
>BC032298-1|AAH32298.1| 828|Homo sapiens protein phosphatase 1,
regulatory (inhibitor) subunit 13 like protein.
Length = 828
Score = 30.3 bits (65), Expect = 6.1
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +3
Query: 93 PAQMPQIRPTPRWTAQPPVRPSTQTPA 173
P PQ +P P+ QP +P T TPA
Sbjct: 412 PQPQPQSQPQPQLPPQPQTQPQTPTPA 438
>AY869712-1|AAW51146.1| 827|Homo sapiens NFkB interacting protein 1
protein.
Length = 827
Score = 30.3 bits (65), Expect = 6.1
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +3
Query: 93 PAQMPQIRPTPRWTAQPPVRPSTQTPA 173
P PQ +P P+ QP +P T TPA
Sbjct: 411 PQPQPQSQPQPQLPPQPQTQPQTPTPA 437
>AK130326-1|BAC85327.1| 508|Homo sapiens protein ( Homo sapiens
cDNA FLJ26816 fis, clone PRS06437. ).
Length = 508
Score = 30.3 bits (65), Expect = 6.1
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +3
Query: 93 PAQMPQIRPTPRWTAQPPVRPSTQTPA 173
P PQ +P P+ QP +P T TPA
Sbjct: 412 PQPQPQSQPQPQLPPQPQTQPQTPTPA 438
>AK128229-1|BAC87339.1| 679|Homo sapiens protein ( Homo sapiens
cDNA FLJ46362 fis, clone TESTI4050293. ).
Length = 679
Score = 30.3 bits (65), Expect = 6.1
Identities = 18/60 (30%), Positives = 26/60 (43%)
Frame = +3
Query: 456 QKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHGESLKAKVDEAVAVLQAH 635
+ QML + L+QR H TGM L +DN +L H + + + VL H
Sbjct: 451 KNQMLSQ--LKLVQRKHSQPQSHFTGMSLALDNLSSKDLLTHAQGISNQDLGTSQVLHVH 508
>AK125938-1|BAC86351.1| 679|Homo sapiens protein ( Homo sapiens
cDNA FLJ43950 fis, clone TESTI4015293. ).
Length = 679
Score = 30.3 bits (65), Expect = 6.1
Identities = 18/60 (30%), Positives = 26/60 (43%)
Frame = +3
Query: 456 QKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHGESLKAKVDEAVAVLQAH 635
+ QML + L+QR H TGM L +DN +L H + + + VL H
Sbjct: 451 KNQMLSQ--LKLVQRKHSQPQSHFTGMSLALDNLSSKDLLTHAQGISNQDLGTSQVLHVH 508
>AJ888472-1|CAI60219.1| 828|Homo sapiens inhibitor of apoptosis
stimulating protein of p53 protein.
Length = 828
Score = 30.3 bits (65), Expect = 6.1
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +3
Query: 93 PAQMPQIRPTPRWTAQPPVRPSTQTPA 173
P PQ +P P+ QP +P T TPA
Sbjct: 412 PQPQPQSQPQPQLPPQPQTQPQTPTPA 438
>AJ606308-1|CAE54436.1| 4262|Homo sapiens secreted mucin MUC17
protein.
Length = 4262
Score = 30.3 bits (65), Expect = 6.1
Identities = 20/62 (32%), Positives = 28/62 (45%)
Frame = +2
Query: 77 TTLLWSSTNAANTTYTPMDCPTTCKTKHSNTCIGLRKYATTLPSSTKSSNTGCITYFSRS 256
+T L S+ A+ T+ TP D T T + T++P+ST S IT S S
Sbjct: 578 STRLVVSSEASTTSTTPADSNTFVTTSSEASSSSTTAEGTSMPTSTYSERGTTITSMSVS 637
Query: 257 KT 262
T
Sbjct: 638 TT 639
>AJ606307-1|CAE54435.1| 4493|Homo sapiens membrane mucin MUC17
protein.
Length = 4493
Score = 30.3 bits (65), Expect = 6.1
Identities = 20/62 (32%), Positives = 28/62 (45%)
Frame = +2
Query: 77 TTLLWSSTNAANTTYTPMDCPTTCKTKHSNTCIGLRKYATTLPSSTKSSNTGCITYFSRS 256
+T L S+ A+ T+ TP D T T + T++P+ST S IT S S
Sbjct: 578 STRLVVSSEASTTSTTPADSNTFVTTSSEASSSSTTAEGTSMPTSTYSERGTTITSMSVS 637
Query: 257 KT 262
T
Sbjct: 638 TT 639
>AB209119-1|BAD92356.1| 1780|Homo sapiens eukaryotic translation
initiation factor 4 gamma, 3 variant protein.
Length = 1780
Score = 30.3 bits (65), Expect = 6.1
Identities = 25/63 (39%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Frame = +3
Query: 3 TRQQMGQIFQPSSAGGYFVPTIPPAQRFYGPAQMPQIRPTPRWT---AQPPVRPSTQTPA 173
T Q M Q S GG+ P Q F Q PQI+P PR T + P +RP QTP
Sbjct: 186 TPQTMNSQPQTRSPGGF-----RPIQFF----QRPQIQP-PRATIPNSSPSIRPGAQTPT 235
Query: 174 SAY 182
+ Y
Sbjct: 236 AVY 238
>AB001025-1|BAA23795.1| 4866|Homo sapiens brain ryanodine receptor
protein.
Length = 4866
Score = 29.9 bits (64), Expect = 8.1
Identities = 16/76 (21%), Positives = 30/76 (39%), Gaps = 1/76 (1%)
Frame = +2
Query: 107 ANTTYTPMDCPTTCKTKHSNT-CIGLRKYATTLPSSTKSSNTGCITYFSRSKTNHRTTRC 283
A+ Y + P C + S++ C+ + S+T Y++ + C
Sbjct: 1284 ADMIYCRLSMPVECHSSFSHSPCLDSEAFQKRKQMQEILSHTTTQCYYAIRIFGGQDPSC 1343
Query: 284 CWHGWINPCTSCYSKQ 331
W GW+ P YS++
Sbjct: 1344 VWVGWVTPDYHLYSEK 1359
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,732,306
Number of Sequences: 237096
Number of extensions: 2544669
Number of successful extensions: 9066
Number of sequences better than 10.0: 81
Number of HSP's better than 10.0 without gapping: 7585
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8946
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7141427170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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