Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_K17
(645 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 85 5e-17
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 85 5e-17
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 85 5e-17
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 85 5e-17
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 81 5e-16
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 44 7e-05
Z81573-2|CAB04626.1| 294|Caenorhabditis elegans Hypothetical pr... 40 0.001
U64834-2|AAB04823.2| 1145|Caenorhabditis elegans Hypothetical pr... 34 0.075
Z82264-7|CAB05164.3| 499|Caenorhabditis elegans Hypothetical pr... 34 0.099
AL110501-1|CAB54509.1| 2129|Caenorhabditis elegans Hypothetical ... 33 0.17
AC006620-1|AAF39780.1| 754|Caenorhabditis elegans Hypothetical ... 33 0.17
Z72504-5|CAA96602.2| 812|Caenorhabditis elegans Hypothetical pr... 32 0.40
Z77662-14|CAI79239.1| 245|Caenorhabditis elegans Hypothetical p... 31 0.92
Z46241-3|CAA86317.1| 556|Caenorhabditis elegans Hypothetical pr... 31 0.92
U89792-1|AAB94380.1| 339|Caenorhabditis elegans seven-in-absent... 31 0.92
AC024759-5|AAK68432.1| 419|Caenorhabditis elegans Hypothetical ... 31 0.92
Z72504-4|CAH60755.1| 653|Caenorhabditis elegans Hypothetical pr... 30 1.2
X91045-1|CAA62505.1| 693|Caenorhabditis elegans let-653 protein. 30 1.2
Z66497-4|CAA91284.1| 401|Caenorhabditis elegans Hypothetical pr... 30 1.6
AF040661-9|AAG24214.1| 345|Caenorhabditis elegans Hypothetical ... 30 1.6
Z82282-3|CAB05275.1| 638|Caenorhabditis elegans Hypothetical pr... 29 2.1
U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical pr... 29 2.8
U40940-3|AAN39667.1| 455|Caenorhabditis elegans Nuclear hormone... 29 2.8
U40940-2|AAM69090.1| 434|Caenorhabditis elegans Nuclear hormone... 29 2.8
U40940-1|AAM69089.1| 439|Caenorhabditis elegans Nuclear hormone... 29 2.8
AF273782-1|AAG15131.1| 439|Caenorhabditis elegans nuclear recep... 29 2.8
AF016451-13|AAB66007.1| 445|Caenorhabditis elegans Activated in... 29 2.8
Z81507-4|CAL49434.1| 598|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z66563-2|CAA91469.3| 2557|Caenorhabditis elegans Hypothetical pr... 29 3.7
DQ523832-1|ABF71877.1| 598|Caenorhabditis elegans P21-activated... 29 3.7
AL032639-12|CAL49443.1| 598|Caenorhabditis elegans Hypothetical... 29 3.7
AL032623-17|CAN86638.1| 1398|Caenorhabditis elegans Hypothetical... 29 3.7
AL032623-16|CAA21511.2| 1816|Caenorhabditis elegans Hypothetical... 29 3.7
Z74029-5|CAA98433.2| 520|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z74029-4|CAA98429.2| 522|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z50858-2|CAD44134.1| 467|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z50858-1|CAA90721.1| 453|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z36238-1|CAA85275.2| 400|Caenorhabditis elegans Hypothetical pr... 28 4.9
U58751-7|AAB00658.2| 729|Caenorhabditis elegans Hepatocyte grow... 28 4.9
DQ523831-1|ABF71876.1| 522|Caenorhabditis elegans P21-activated... 28 4.9
AL031627-8|CAA20960.2| 222|Caenorhabditis elegans Hypothetical ... 28 4.9
AL023851-2|CAA19555.2| 209|Caenorhabditis elegans Hypothetical ... 28 4.9
AF408757-1|AAO27836.1| 456|Caenorhabditis elegans nucleobindin ... 28 4.9
AF098994-5|AAC67473.3| 579|Caenorhabditis elegans Hypothetical ... 28 4.9
AF098994-4|AAO21390.1| 606|Caenorhabditis elegans Hypothetical ... 28 4.9
U80436-7|AAC71109.1| 1638|Caenorhabditis elegans Uncoordinated p... 28 6.5
U80436-5|AAT68892.1| 2140|Caenorhabditis elegans Uncoordinated p... 28 6.5
U80436-1|AAC71108.1| 2488|Caenorhabditis elegans Uncoordinated p... 28 6.5
AF048835-1|AAC12932.1| 1638|Caenorhabditis elegans guanine nucle... 28 6.5
AF048834-1|AAC12931.1| 2488|Caenorhabditis elegans guanine nucle... 28 6.5
AF025458-5|AAB70974.1| 298|Caenorhabditis elegans Squat protein... 28 6.5
Z83232-1|CAB05755.3| 1764|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 27 8.6
U97194-8|AAB52447.3| 1254|Caenorhabditis elegans Prion-like-(q/n... 27 8.6
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 27 8.6
AB162421-1|BAD36749.1| 1766|Caenorhabditis elegans plexin protein. 27 8.6
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 84.6 bits (200), Expect = 5e-17
Identities = 52/120 (43%), Positives = 68/120 (56%), Gaps = 9/120 (7%)
Frame = +3
Query: 306 RAPLVTQSSRPAGYKYTANMRNPPAPQPA-------VHIQGQEXXXXXXXXXXXXQEQKQ 464
R P Q RPA + PP P A + I GQE QEQKQ
Sbjct: 529 RPPQQQQQQRPA----PTGPKAPPQPYQAYQQRPQGIVIGGQEPLTSAMLAAAAPQEQKQ 584
Query: 465 MLGERLFPLIQRMHPDL--AGKITGMLLEIDNSELLHMLEHGESLKAKVDEAVAVLQAHQ 638
+LGER++ LI++++P AGKITGM+LEIDNSEL+ ML+ E ++KVDEA +VL + Q
Sbjct: 585 LLGERIYALIEKLYPGHKDAGKITGMMLEIDNSELIMMLQDSELFRSKVDEAASVLVSAQ 644
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 84.6 bits (200), Expect = 5e-17
Identities = 52/120 (43%), Positives = 68/120 (56%), Gaps = 9/120 (7%)
Frame = +3
Query: 306 RAPLVTQSSRPAGYKYTANMRNPPAPQPA-------VHIQGQEXXXXXXXXXXXXQEQKQ 464
R P Q RPA + PP P A + I GQE QEQKQ
Sbjct: 469 RPPQQQQQQRPA----PTGPKAPPQPYQAYQQRPQGIVIGGQEPLTSAMLAAAAPQEQKQ 524
Query: 465 MLGERLFPLIQRMHPDL--AGKITGMLLEIDNSELLHMLEHGESLKAKVDEAVAVLQAHQ 638
+LGER++ LI++++P AGKITGM+LEIDNSEL+ ML+ E ++KVDEA +VL + Q
Sbjct: 525 LLGERIYALIEKLYPGHKDAGKITGMMLEIDNSELIMMLQDSELFRSKVDEAASVLVSAQ 584
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 84.6 bits (200), Expect = 5e-17
Identities = 52/120 (43%), Positives = 68/120 (56%), Gaps = 9/120 (7%)
Frame = +3
Query: 306 RAPLVTQSSRPAGYKYTANMRNPPAPQPA-------VHIQGQEXXXXXXXXXXXXQEQKQ 464
R P Q RPA + PP P A + I GQE QEQKQ
Sbjct: 466 RPPQQQQQQRPA----PTGPKAPPQPYQAYQQRPQGIVIGGQEPLTSAMLAAAAPQEQKQ 521
Query: 465 MLGERLFPLIQRMHPDL--AGKITGMLLEIDNSELLHMLEHGESLKAKVDEAVAVLQAHQ 638
+LGER++ LI++++P AGKITGM+LEIDNSEL+ ML+ E ++KVDEA +VL + Q
Sbjct: 522 LLGERIYALIEKLYPGHKDAGKITGMMLEIDNSELIMMLQDSELFRSKVDEAASVLVSAQ 581
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 84.6 bits (200), Expect = 5e-17
Identities = 52/120 (43%), Positives = 68/120 (56%), Gaps = 9/120 (7%)
Frame = +3
Query: 306 RAPLVTQSSRPAGYKYTANMRNPPAPQPA-------VHIQGQEXXXXXXXXXXXXQEQKQ 464
R P Q RPA + PP P A + I GQE QEQKQ
Sbjct: 529 RPPQQQQQQRPA----PTGPKAPPQPYQAYQQRPQGIVIGGQEPLTSAMLAAAAPQEQKQ 584
Query: 465 MLGERLFPLIQRMHPDL--AGKITGMLLEIDNSELLHMLEHGESLKAKVDEAVAVLQAHQ 638
+LGER++ LI++++P AGKITGM+LEIDNSEL+ ML+ E ++KVDEA +VL + Q
Sbjct: 585 LLGERIYALIEKLYPGHKDAGKITGMMLEIDNSELIMMLQDSELFRSKVDEAASVLVSAQ 644
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 81.4 bits (192), Expect = 5e-16
Identities = 42/88 (47%), Positives = 57/88 (64%), Gaps = 2/88 (2%)
Frame = +3
Query: 384 QPAVHIQGQEXXXXXXXXXXXXQEQKQMLGERLFPLIQRMHPDL--AGKITGMLLEIDNS 557
Q + I GQE QEQKQ+LGER++ LI++M P+ AGKITGM+LEIDN+
Sbjct: 593 QSGIVIHGQETLTSHMLAQAAPQEQKQLLGERIYALIEKMFPNHKEAGKITGMMLEIDNA 652
Query: 558 ELLHMLEHGESLKAKVDEAVAVLQAHQA 641
EL+ ML+ E ++KV+EA VL Q+
Sbjct: 653 ELIMMLQDAELFRSKVEEAFGVLTNAQS 680
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 44.4 bits (100), Expect = 7e-05
Identities = 27/90 (30%), Positives = 40/90 (44%), Gaps = 3/90 (3%)
Frame = +2
Query: 68 TSCTTLLWSSTNAANTTYTPMDCPTTCKTKHSNTCIGLRKYATTLPSSTKSSNTGCITYF 247
T+ TT ++T TT TP PTT T + T +TT + T + + T
Sbjct: 257 TTPTTTTQTTTKPTTTTTTPTTTPTTTTTPTTTTTTAKTTKSTTTTTKTTKTTSTPTTTT 316
Query: 248 SRSKTNHRTTRC---CWHGWINPCTSCYSK 328
+ KT T++C C GW+ CY+K
Sbjct: 317 TTPKTPFDTSKCTVMCSTGWVYYNNLCYAK 346
>Z81573-2|CAB04626.1| 294|Caenorhabditis elegans Hypothetical
protein M02G9.3 protein.
Length = 294
Score = 40.3 bits (90), Expect = 0.001
Identities = 28/99 (28%), Positives = 40/99 (40%), Gaps = 6/99 (6%)
Frame = +2
Query: 41 CRRILCSHHTSCTTLLWSSTNAANTTY----TPMDCPTTCKTKHSNTCI--GLRKYATTL 202
C+R CS+ C T S TN N+ T C TC SN C G + +
Sbjct: 112 CQRNSCSN--LCNTGSNSCTNRCNSQCLQICTTPSCTNTCSNSCSNACSNGGNQPIVIVI 169
Query: 203 PSSTKSSNTGCITYFSRSKTNHRTTRCCWHGWINPCTSC 319
PSS+++ C S + T + C + + C SC
Sbjct: 170 PSSSRNCQNSCQNQCSSACTTMTCRQTCQNTCLGSCNSC 208
>U64834-2|AAB04823.2| 1145|Caenorhabditis elegans Hypothetical
protein F54D11.2 protein.
Length = 1145
Score = 34.3 bits (75), Expect = 0.075
Identities = 31/113 (27%), Positives = 40/113 (35%), Gaps = 1/113 (0%)
Frame = +3
Query: 72 PAQRFYGPAQMPQIRPTPRWTAQPPVRPSTQTPASAYANMQXXXXXXXXXXXXXXXXTSL 251
PA P + P+I P ++ P++ P A A + L
Sbjct: 210 PAPEPLVPEKKPKIEDAPTTSSPKKSTPTSAPPTRASARVSKPNRLYADGSFNTEI---L 266
Query: 252 GARPITGQQGVAGTAGSIRAPLVTQSSRPAGY-KYTANMRNPPAPQPAVHIQG 407
G IT Q V P + PAG K TA R PPAP+P I G
Sbjct: 267 GRTRITEQNPVKEAQAKESTPELADLPLPAGRRKSTAAPRAPPAPKPIPVING 319
>Z82264-7|CAB05164.3| 499|Caenorhabditis elegans Hypothetical
protein C49C3.13 protein.
Length = 499
Score = 33.9 bits (74), Expect = 0.099
Identities = 23/87 (26%), Positives = 35/87 (40%)
Frame = +2
Query: 68 TSCTTLLWSSTNAANTTYTPMDCPTTCKTKHSNTCIGLRKYATTLPSSTKSSNTGCITYF 247
T TT +ST TT T TT T T TT P++T ++ T
Sbjct: 299 TESTTTETTSTTTPTTTTTAPTTTTTASTTTFKTTTITTTTQTTTPTTTATTTKPTTTTP 358
Query: 248 SRSKTNHRTTRCCWHGWINPCTSCYSK 328
+ ++T + C W++ CY+K
Sbjct: 359 TTTRTPVDCSAKCDPFWVSYSDGCYAK 385
>AL110501-1|CAB54509.1| 2129|Caenorhabditis elegans Hypothetical
protein Y79H2A.3a protein.
Length = 2129
Score = 33.1 bits (72), Expect = 0.17
Identities = 19/42 (45%), Positives = 23/42 (54%)
Frame = +3
Query: 69 PPAQRFYGPAQMPQIRPTPRWTAQPPVRPSTQTPASAYANMQ 194
PP Q+F P Q Q P+ A P V+P QTPAS+Y Q
Sbjct: 2080 PPVQQFQ-PQQQQQYYQ-PQQQALPQVQPQFQTPASSYGGGQ 2119
>AC006620-1|AAF39780.1| 754|Caenorhabditis elegans Hypothetical
protein C51G7.3 protein.
Length = 754
Score = 33.1 bits (72), Expect = 0.17
Identities = 19/42 (45%), Positives = 23/42 (54%)
Frame = +3
Query: 69 PPAQRFYGPAQMPQIRPTPRWTAQPPVRPSTQTPASAYANMQ 194
PP Q+F P Q Q P+ A P V+P QTPAS+Y Q
Sbjct: 705 PPVQQFQ-PQQQQQYYQ-PQQQALPQVQPQFQTPASSYGGGQ 744
>Z72504-5|CAA96602.2| 812|Caenorhabditis elegans Hypothetical
protein C29E6.1a protein.
Length = 812
Score = 31.9 bits (69), Expect = 0.40
Identities = 29/86 (33%), Positives = 36/86 (41%), Gaps = 6/86 (6%)
Frame = +2
Query: 2 HEATNGSDIPTK*CRRILCSHHTSCTTLLWSSTNAANTTYTPMDCPT-TCKTKHSNTCIG 178
H +T D+PT + TS T S A TT TP T T T S T +
Sbjct: 487 HPSTQKIDVPTT-------TVQTSTTVPTTPSKTTATTTTTPKPTTTETATTSSSTTTVT 539
Query: 179 LRK-----YATTLPSSTKSSNTGCIT 241
+K TTLPS+T S+ T T
Sbjct: 540 TQKPTTVTSTTTLPSTTASTTTKTTT 565
>Z77662-14|CAI79239.1| 245|Caenorhabditis elegans Hypothetical
protein F47B8.13 protein.
Length = 245
Score = 30.7 bits (66), Expect = 0.92
Identities = 32/118 (27%), Positives = 40/118 (33%), Gaps = 1/118 (0%)
Frame = +3
Query: 42 AGGYFVPTIPPAQRFYGPAQMPQIRPTPRWTAQPPVRPSTQTPASAYANMQXXXXXXXXX 221
A G PT P A+ PA P+ P P A+P + PS +A
Sbjct: 97 AEGGAAPTAP-AEPVPAPAPEPEAAPAPAPVAEPALAPSPDAAPAADGASYSAGAAAPAG 155
Query: 222 XXXXXXXTSLGARPITGQQGVAGTAGSIRAPLVTQSSRPAGYKYTANMRNP-PAPQPA 392
AR + G A A + AP + PA A P PAP PA
Sbjct: 156 GASYPAKKRRVARDY-AEGGAAPAAPAEPAPEPAPAPAPAPEAALAPETAPAPAPAPA 212
>Z46241-3|CAA86317.1| 556|Caenorhabditis elegans Hypothetical
protein C38D4.4 protein.
Length = 556
Score = 30.7 bits (66), Expect = 0.92
Identities = 22/61 (36%), Positives = 26/61 (42%), Gaps = 7/61 (11%)
Frame = +3
Query: 27 FQPSSAGGYFVPTIPPAQRFYGPAQMPQIRPT-PRWTA------QPPVRPSTQTPASAYA 185
F S GY P F PA + P P+ T PPVRPST T S++A
Sbjct: 116 FHNKSGFGYAAHLRSPKPSFMYPASSARANPAKPQATGYRNTVRHPPVRPSTATGHSSFA 175
Query: 186 N 188
N
Sbjct: 176 N 176
>U89792-1|AAB94380.1| 339|Caenorhabditis elegans seven-in-absentia
protein homologue-1 protein.
Length = 339
Score = 30.7 bits (66), Expect = 0.92
Identities = 20/66 (30%), Positives = 27/66 (40%), Gaps = 1/66 (1%)
Frame = +2
Query: 134 CPTTCKTKHSNTCIGLRKYATTLPSSTKSSNTGC-ITYFSRSKTNHRTTRCCWHGWINPC 310
CPT S +GL K A T+ K S +GC + + KT H C + + PC
Sbjct: 121 CPTCRGPTPSVRNLGLEKIANTVRFPCKFSTSGCPLNFHHADKTEHEEL-CEFRPYCCPC 179
Query: 311 TSCYSK 328
K
Sbjct: 180 PGASCK 185
>AC024759-5|AAK68432.1| 419|Caenorhabditis elegans Hypothetical
protein Y37E11AR.2 protein.
Length = 419
Score = 30.7 bits (66), Expect = 0.92
Identities = 20/66 (30%), Positives = 27/66 (40%), Gaps = 1/66 (1%)
Frame = +2
Query: 134 CPTTCKTKHSNTCIGLRKYATTLPSSTKSSNTGC-ITYFSRSKTNHRTTRCCWHGWINPC 310
CPT S +GL K A T+ K S +GC + + KT H C + + PC
Sbjct: 187 CPTCRGPTPSVRNLGLEKIANTVRFPCKFSTSGCPLNFHHADKTEHEEL-CEFRPYCCPC 245
Query: 311 TSCYSK 328
K
Sbjct: 246 PGASCK 251
>Z72504-4|CAH60755.1| 653|Caenorhabditis elegans Hypothetical
protein C29E6.1b protein.
Length = 653
Score = 30.3 bits (65), Expect = 1.2
Identities = 24/64 (37%), Positives = 28/64 (43%), Gaps = 6/64 (9%)
Frame = +2
Query: 68 TSCTTLLWSSTNAANTTYTPMDCPT-TCKTKHSNTCIGLRK-----YATTLPSSTKSSNT 229
TS T S A TT TP T T T S T + +K TTLPS+T S+ T
Sbjct: 343 TSTTVPTTPSKTTATTTTTPKPTTTETATTSSSTTTVTTQKPTTVTSTTTLPSTTASTTT 402
Query: 230 GCIT 241
T
Sbjct: 403 KTTT 406
>X91045-1|CAA62505.1| 693|Caenorhabditis elegans let-653 protein.
Length = 693
Score = 30.3 bits (65), Expect = 1.2
Identities = 24/64 (37%), Positives = 28/64 (43%), Gaps = 6/64 (9%)
Frame = +2
Query: 68 TSCTTLLWSSTNAANTTYTPMDCPT-TCKTKHSNTCIGLRK-----YATTLPSSTKSSNT 229
TS T S A TT TP T T T S T + +K TTLPS+T S+ T
Sbjct: 383 TSTTVPTTPSKTTATTTTTPKPTTTETATTSSSTTTVTTQKPTTVTSTTTLPSTTASTTT 442
Query: 230 GCIT 241
T
Sbjct: 443 KTTT 446
>Z66497-4|CAA91284.1| 401|Caenorhabditis elegans Hypothetical
protein K08F8.2 protein.
Length = 401
Score = 29.9 bits (64), Expect = 1.6
Identities = 18/44 (40%), Positives = 23/44 (52%)
Frame = +3
Query: 57 VPTIPPAQRFYGPAQMPQIRPTPRWTAQPPVRPSTQTPASAYAN 188
VP + A Q+ Q++PT T Q PV STQ PAS A+
Sbjct: 143 VPLLQAASHIPSMLQLCQLQPT---TIQSPVYASTQQPASTSAS 183
>AF040661-9|AAG24214.1| 345|Caenorhabditis elegans Hypothetical
protein W10G11.5 protein.
Length = 345
Score = 29.9 bits (64), Expect = 1.6
Identities = 19/61 (31%), Positives = 26/61 (42%)
Frame = +2
Query: 95 STNAANTTYTPMDCPTTCKTKHSNTCIGLRKYATTLPSSTKSSNTGCITYFSRSKTNHRT 274
+T + TT T PTT + H T + TT+P ST+ T T + T T
Sbjct: 96 TTTSTTTTVTTTPIPTTVTSTHIPTTVTTTSIPTTVP-STQLPTTVTTTPIPTTTTRKTT 154
Query: 275 T 277
T
Sbjct: 155 T 155
>Z82282-3|CAB05275.1| 638|Caenorhabditis elegans Hypothetical
protein T07G12.3 protein.
Length = 638
Score = 29.5 bits (63), Expect = 2.1
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +1
Query: 109 KYDLHPDGLPNHL*DQALKHLHR 177
K+++H + L NHL ++ L H+HR
Sbjct: 511 KFEIHNETLKNHLGEKLLNHVHR 533
>U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical
protein C12D12.1a protein.
Length = 769
Score = 29.1 bits (62), Expect = 2.8
Identities = 17/74 (22%), Positives = 26/74 (35%)
Frame = +3
Query: 117 PTPRWTAQPPVRPSTQTPASAYANMQXXXXXXXXXXXXXXXXTSLGARPITGQQGVAGTA 296
P P T PP P+T TP + T+ P+T + V +
Sbjct: 492 PVPTTTNTPPANPTTATPTTVGTMTPSTGTTTVPVPTTTGSPTTQTTAPVT-KPTVPSST 550
Query: 297 GSIRAPLVTQSSRP 338
P+ T +S+P
Sbjct: 551 TQTAPPVTTPTSQP 564
>U40940-3|AAN39667.1| 455|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 40, isoform c protein.
Length = 455
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = +2
Query: 149 KTKHSNTCIGLRKYATTLPSSTKSSNTGCITYFSRSKTNHRTTRCCWHG 295
K C+ +A+ + S S N GC T+F R+ N +T C + G
Sbjct: 24 KIPEGTLCVVCSDFASGIHYSVASCN-GCKTFFRRALVNKQTFTCQFSG 71
>U40940-2|AAM69090.1| 434|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 40, isoform b protein.
Length = 434
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = +2
Query: 149 KTKHSNTCIGLRKYATTLPSSTKSSNTGCITYFSRSKTNHRTTRCCWHG 295
K C+ +A+ + S S N GC T+F R+ N +T C + G
Sbjct: 8 KIPEGTLCVVCSDFASGIHYSVASCN-GCKTFFRRALVNKQTFTCQFSG 55
>U40940-1|AAM69089.1| 439|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 40, isoform a protein.
Length = 439
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = +2
Query: 149 KTKHSNTCIGLRKYATTLPSSTKSSNTGCITYFSRSKTNHRTTRCCWHG 295
K C+ +A+ + S S N GC T+F R+ N +T C + G
Sbjct: 8 KIPEGTLCVVCSDFASGIHYSVASCN-GCKTFFRRALVNKQTFTCQFSG 55
>AF273782-1|AAG15131.1| 439|Caenorhabditis elegans nuclear receptor
NHR-40 protein.
Length = 439
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = +2
Query: 149 KTKHSNTCIGLRKYATTLPSSTKSSNTGCITYFSRSKTNHRTTRCCWHG 295
K C+ +A+ + S S N GC T+F R+ N +T C + G
Sbjct: 8 KIPEGTLCVVCSDFASGIHYSVASCN-GCKTFFRRALVNKQTFTCQFSG 55
>AF016451-13|AAB66007.1| 445|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 8 protein.
Length = 445
Score = 29.1 bits (62), Expect = 2.8
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = +2
Query: 134 CPTTCKTKHSNTCIGLRKYATTLPSSTKSSNTGCITYFS 250
C T C++ SN+C + T S + S+ C T +S
Sbjct: 396 CQTACQSSCSNSCQAAQPATTACQQSPQQSSCSCQTNYS 434
>Z81507-4|CAL49434.1| 598|Caenorhabditis elegans Hypothetical
protein Y38F1A.10a protein.
Length = 598
Score = 28.7 bits (61), Expect = 3.7
Identities = 17/51 (33%), Positives = 24/51 (47%)
Frame = +3
Query: 33 PSSAGGYFVPTIPPAQRFYGPAQMPQIRPTPRWTAQPPVRPSTQTPASAYA 185
PS A + + P + F G + P++ P + QPPV P ASA A
Sbjct: 186 PSPAPVPYSESAPQLKTFTG--ETPKLHPRSPFPPQPPVLPQRSKTASAVA 234
>Z66563-2|CAA91469.3| 2557|Caenorhabditis elegans Hypothetical protein
F46C3.3 protein.
Length = 2557
Score = 28.7 bits (61), Expect = 3.7
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 315 LVTQSSRPAGYKYTANMRNPPAPQ 386
LV + + AGY YT +N PAPQ
Sbjct: 1117 LVREYNEEAGYAYTLPRKNKPAPQ 1140
>DQ523832-1|ABF71877.1| 598|Caenorhabditis elegans P21-activated
kinase MAX-2 protein.
Length = 598
Score = 28.7 bits (61), Expect = 3.7
Identities = 17/51 (33%), Positives = 24/51 (47%)
Frame = +3
Query: 33 PSSAGGYFVPTIPPAQRFYGPAQMPQIRPTPRWTAQPPVRPSTQTPASAYA 185
PS A + + P + F G + P++ P + QPPV P ASA A
Sbjct: 186 PSPAPVPYSESAPQLKTFTG--ETPKLHPRSPFPPQPPVLPQRSKTASAVA 234
>AL032639-12|CAL49443.1| 598|Caenorhabditis elegans Hypothetical
protein Y38F1A.10a protein.
Length = 598
Score = 28.7 bits (61), Expect = 3.7
Identities = 17/51 (33%), Positives = 24/51 (47%)
Frame = +3
Query: 33 PSSAGGYFVPTIPPAQRFYGPAQMPQIRPTPRWTAQPPVRPSTQTPASAYA 185
PS A + + P + F G + P++ P + QPPV P ASA A
Sbjct: 186 PSPAPVPYSESAPQLKTFTG--ETPKLHPRSPFPPQPPVLPQRSKTASAVA 234
>AL032623-17|CAN86638.1| 1398|Caenorhabditis elegans Hypothetical
protein Y43F8B.3b protein.
Length = 1398
Score = 28.7 bits (61), Expect = 3.7
Identities = 19/59 (32%), Positives = 23/59 (38%)
Frame = +2
Query: 110 NTTYTPMDCPTTCKTKHSNTCIGLRKYATTLPSSTKSSNTGCITYFSRSKTNHRTTRCC 286
N T DC TC +N C TL S T SS+T + N +T CC
Sbjct: 733 NNFLTQEDCAATCDV-FTNPCNQPIALPATLCSGTGSSDTCGANMWCHIGANQDSTVCC 790
>AL032623-16|CAA21511.2| 1816|Caenorhabditis elegans Hypothetical
protein Y43F8B.3a protein.
Length = 1816
Score = 28.7 bits (61), Expect = 3.7
Identities = 19/59 (32%), Positives = 23/59 (38%)
Frame = +2
Query: 110 NTTYTPMDCPTTCKTKHSNTCIGLRKYATTLPSSTKSSNTGCITYFSRSKTNHRTTRCC 286
N T DC TC +N C TL S T SS+T + N +T CC
Sbjct: 1151 NNFLTQEDCAATCDV-FTNPCNQPIALPATLCSGTGSSDTCGANMWCHIGANQDSTVCC 1208
>Z74029-5|CAA98433.2| 520|Caenorhabditis elegans Hypothetical
protein C45B11.1b protein.
Length = 520
Score = 28.3 bits (60), Expect = 4.9
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +3
Query: 36 SSAGGYFVPTIPP-AQRFYGPAQMPQIRPTPRWTAQPPV 149
SSA F PT+PP +QR Y P P P P +PP+
Sbjct: 120 SSARHSFRPTLPPVSQRGY-PFNDPSYAPLPLRNQKPPM 157
>Z74029-4|CAA98429.2| 522|Caenorhabditis elegans Hypothetical
protein C45B11.1a protein.
Length = 522
Score = 28.3 bits (60), Expect = 4.9
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +3
Query: 36 SSAGGYFVPTIPP-AQRFYGPAQMPQIRPTPRWTAQPPV 149
SSA F PT+PP +QR Y P P P P +PP+
Sbjct: 122 SSARHSFRPTLPPVSQRGY-PFNDPSYAPLPLRNQKPPM 159
>Z50858-2|CAD44134.1| 467|Caenorhabditis elegans Hypothetical
protein F44A6.1b protein.
Length = 467
Score = 28.3 bits (60), Expect = 4.9
Identities = 16/38 (42%), Positives = 18/38 (47%), Gaps = 4/38 (10%)
Frame = +3
Query: 69 PPAQRFYGPAQMP----QIRPTPRWTAQPPVRPSTQTP 170
P AQ+ PAQ P P P AQPPV+ Q P
Sbjct: 399 PQAQQQVHPAQQPIQPVNANPPPVQNAQPPVQQQQQPP 436
>Z50858-1|CAA90721.1| 453|Caenorhabditis elegans Hypothetical
protein F44A6.1a protein.
Length = 453
Score = 28.3 bits (60), Expect = 4.9
Identities = 16/38 (42%), Positives = 18/38 (47%), Gaps = 4/38 (10%)
Frame = +3
Query: 69 PPAQRFYGPAQMP----QIRPTPRWTAQPPVRPSTQTP 170
P AQ+ PAQ P P P AQPPV+ Q P
Sbjct: 385 PQAQQQVHPAQQPIQPVNANPPPVQNAQPPVQQQQQPP 422
>Z36238-1|CAA85275.2| 400|Caenorhabditis elegans Hypothetical
protein R74.2 protein.
Length = 400
Score = 28.3 bits (60), Expect = 4.9
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +3
Query: 75 AQRFYGPAQMPQIRPTPRWTAQPPVRPSTQTPASAY 182
A +F P + P + P P Q PV+ +T+ P AY
Sbjct: 101 APKFDIPTRAPLLNPNPIGRNQNPVQTTTKRPVVAY 136
>U58751-7|AAB00658.2| 729|Caenorhabditis elegans Hepatocyte growth
factor-regulatedtk substrate (hrs) family protein 1
protein.
Length = 729
Score = 28.3 bits (60), Expect = 4.9
Identities = 20/58 (34%), Positives = 23/58 (39%)
Frame = +3
Query: 9 QQMGQIFQPSSAGGYFVPTIPPAQRFYGPAQMPQIRPTPRWTAQPPVRPSTQTPASAY 182
QQMG P S P PP Q +YG Q PQ + P + STQ Y
Sbjct: 553 QQMGYGAPPPSG-----PQQPPQQSYYGYQQGPQSQAPPPSSQYQQSHASTQQQQQQY 605
>DQ523831-1|ABF71876.1| 522|Caenorhabditis elegans P21-activated
kinase PAK-2 protein.
Length = 522
Score = 28.3 bits (60), Expect = 4.9
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +3
Query: 36 SSAGGYFVPTIPP-AQRFYGPAQMPQIRPTPRWTAQPPV 149
SSA F PT+PP +QR Y P P P P +PP+
Sbjct: 122 SSARHSFRPTLPPVSQRGY-PFNDPSYAPLPLRNQKPPM 159
>AL031627-8|CAA20960.2| 222|Caenorhabditis elegans Hypothetical
protein Y102A5C.17 protein.
Length = 222
Score = 28.3 bits (60), Expect = 4.9
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +2
Query: 68 TSCTTLLWSSTNAANTTYTPMDCPT 142
T+ TT ++T + TT TP+ CPT
Sbjct: 50 TTTTTTTTTTTTTSTTTTTPIPCPT 74
>AL023851-2|CAA19555.2| 209|Caenorhabditis elegans Hypothetical
protein Y68A4B.2 protein.
Length = 209
Score = 28.3 bits (60), Expect = 4.9
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +2
Query: 68 TSCTTLLWSSTNAANTTYTPMDCPT 142
T+ TT ++T + TT TP+ CPT
Sbjct: 21 TTSTTTTTTTTTTSTTTTTPIPCPT 45
>AF408757-1|AAO27836.1| 456|Caenorhabditis elegans nucleobindin
protein.
Length = 456
Score = 28.3 bits (60), Expect = 4.9
Identities = 16/38 (42%), Positives = 18/38 (47%), Gaps = 4/38 (10%)
Frame = +3
Query: 69 PPAQRFYGPAQMP----QIRPTPRWTAQPPVRPSTQTP 170
P AQ+ PAQ P P P AQPPV+ Q P
Sbjct: 388 PQAQQQVHPAQQPIQPVNANPPPVQNAQPPVQQQQQPP 425
>AF098994-5|AAC67473.3| 579|Caenorhabditis elegans Hypothetical
protein T06A4.1a protein.
Length = 579
Score = 28.3 bits (60), Expect = 4.9
Identities = 12/39 (30%), Positives = 18/39 (46%)
Frame = +3
Query: 60 PTIPPAQRFYGPAQMPQIRPTPRWTAQPPVRPSTQTPAS 176
P IPP +R Y + P T +P P+T+ P +
Sbjct: 454 PAIPPYRRGYSIIDTTTMEPVDEITQKPTEAPTTEEPTT 492
>AF098994-4|AAO21390.1| 606|Caenorhabditis elegans Hypothetical
protein T06A4.1b protein.
Length = 606
Score = 28.3 bits (60), Expect = 4.9
Identities = 12/39 (30%), Positives = 18/39 (46%)
Frame = +3
Query: 60 PTIPPAQRFYGPAQMPQIRPTPRWTAQPPVRPSTQTPAS 176
P IPP +R Y + P T +P P+T+ P +
Sbjct: 454 PAIPPYRRGYSIIDTTTMEPVDEITQKPTEAPTTEEPTT 492
>U80436-7|AAC71109.1| 1638|Caenorhabditis elegans Uncoordinated
protein 73, isoform b protein.
Length = 1638
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +3
Query: 75 AQRFYGPAQMPQIRPTPRWTAQPPVRPS 158
A+ F+ AQ PRWTAQP V P+
Sbjct: 389 AKEFFTSAQR-YFAEVPRWTAQPGVNPN 415
>U80436-5|AAT68892.1| 2140|Caenorhabditis elegans Uncoordinated
protein 73, isoform f protein.
Length = 2140
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +3
Query: 75 AQRFYGPAQMPQIRPTPRWTAQPPVRPS 158
A+ F+ AQ PRWTAQP V P+
Sbjct: 389 AKEFFTSAQR-YFAEVPRWTAQPGVNPN 415
>U80436-1|AAC71108.1| 2488|Caenorhabditis elegans Uncoordinated
protein 73, isoform a protein.
Length = 2488
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +3
Query: 75 AQRFYGPAQMPQIRPTPRWTAQPPVRPS 158
A+ F+ AQ PRWTAQP V P+
Sbjct: 389 AKEFFTSAQR-YFAEVPRWTAQPGVNPN 415
>AF048835-1|AAC12932.1| 1638|Caenorhabditis elegans guanine
nucleotide exchange factorUNC-73B protein.
Length = 1638
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +3
Query: 75 AQRFYGPAQMPQIRPTPRWTAQPPVRPS 158
A+ F+ AQ PRWTAQP V P+
Sbjct: 389 AKEFFTSAQR-YFAEVPRWTAQPGVNPN 415
>AF048834-1|AAC12931.1| 2488|Caenorhabditis elegans guanine
nucleotide exchange factorUNC-73A protein.
Length = 2488
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +3
Query: 75 AQRFYGPAQMPQIRPTPRWTAQPPVRPS 158
A+ F+ AQ PRWTAQP V P+
Sbjct: 389 AKEFFTSAQR-YFAEVPRWTAQPGVNPN 415
>AF025458-5|AAB70974.1| 298|Caenorhabditis elegans Squat protein 2
protein.
Length = 298
Score = 27.9 bits (59), Expect = 6.5
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +3
Query: 270 GQQGVAGTAGSI-RAPLVTQSSRPAGYKYTANMRNPPAPQPAVHIQG 407
G+QGV+G G+ R + + PAG+K +R PP P+ + G
Sbjct: 203 GRQGVSGPKGAPGRINQINGPAGPAGHK---GVRGPPGPRGEAGLDG 246
>Z83232-1|CAB05755.3| 1764|Caenorhabditis elegans Hypothetical
protein K04B12.1 protein.
Length = 1764
Score = 27.5 bits (58), Expect = 8.6
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = +2
Query: 56 CSHHTSCTTLLWSSTNAANTTYTPMDCPTTCK 151
CSHH+SCT L S + C T+ +
Sbjct: 445 CSHHSSCTECLVSVDPLCQWCHPTQSCTTSAR 476
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 27.5 bits (58), Expect = 8.6
Identities = 13/39 (33%), Positives = 16/39 (41%)
Frame = +3
Query: 60 PTIPPAQRFYGPAQMPQIRPTPRWTAQPPVRPSTQTPAS 176
P PP R P+ PQ + PP P TP+S
Sbjct: 465 PAPPPPSRIPNPSPSPQPAEVSKSPPPPPPLPPIATPSS 503
>U97194-8|AAB52447.3| 1254|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 20
protein.
Length = 1254
Score = 27.5 bits (58), Expect = 8.6
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +3
Query: 6 RQQMGQIFQPSSAGGYFVPTIPPAQRFYGPAQMP 107
+QQ GQ+ Q G P +PP Q + P +P
Sbjct: 706 QQQQGQMVQQPGYPGQGYPGMPPPQGAFPPGYLP 739
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 27.5 bits (58), Expect = 8.6
Identities = 13/39 (33%), Positives = 16/39 (41%)
Frame = +3
Query: 60 PTIPPAQRFYGPAQMPQIRPTPRWTAQPPVRPSTQTPAS 176
P PP R P+ PQ + PP P TP+S
Sbjct: 472 PAPPPPSRIPNPSPSPQPAEVSKSPPPPPPLPPIATPSS 510
>AB162421-1|BAD36749.1| 1766|Caenorhabditis elegans plexin protein.
Length = 1766
Score = 27.5 bits (58), Expect = 8.6
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = +2
Query: 56 CSHHTSCTTLLWSSTNAANTTYTPMDCPTTCK 151
CSHH+SCT L S + C T+ +
Sbjct: 447 CSHHSSCTECLVSVDPLCQWCHPTQSCTTSAR 478
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,812,211
Number of Sequences: 27780
Number of extensions: 359901
Number of successful extensions: 1626
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 1381
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1618
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1423653030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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