Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0008_K13
         (570 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase p...    23   2.8  
AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase p...    23   2.8  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    22   3.7  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    22   3.7  
AF134816-1|AAD40232.1|   50|Apis mellifera unknown protein.            22   4.9  

>AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +1

Query: 457 RGVVSSGCGTDLYRSSLRGTCCNRYGLLPAPQNSP 561
           RG   S  G  +YR++  G      G+LP P+ +P
Sbjct: 177 RGFGVSVQGIIIYRAAYFGFYDTARGMLPDPKKTP 211


>AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +1

Query: 457 RGVVSSGCGTDLYRSSLRGTCCNRYGLLPAPQNSP 561
           RG   S  G  +YR++  G      G+LP P+ +P
Sbjct: 177 RGFGVSVQGIIIYRAAYFGFYDTARGMLPDPKKTP 211


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 13/48 (27%), Positives = 22/48 (45%)
 Frame = -1

Query: 216 PSTNVRNLRSYVMLDVLLTMDATSSTAQSMDPSMSGGNSKMNYIVCKI 73
           P T  R    ++M +  L +  T  T   + P +  GN K+N I+  +
Sbjct: 208 PMTFCRVFPFHLMFNRDLIIVQTGCTITRVIPQVCSGNCKLNDILLTV 255


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 13/48 (27%), Positives = 22/48 (45%)
 Frame = -1

Query: 216 PSTNVRNLRSYVMLDVLLTMDATSSTAQSMDPSMSGGNSKMNYIVCKI 73
           P T  R    ++M +  L +  T  T   + P +  GN K+N I+  +
Sbjct: 208 PMTFCRVFPFHLMFNRDLIIVQTGCTITRVIPQVCSGNCKLNDILLTV 255


>AF134816-1|AAD40232.1|   50|Apis mellifera unknown protein.
          Length = 50

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 5/18 (27%), Positives = 12/18 (66%)
 Frame = -2

Query: 371 PRHSSACAYWTAHYVCTL 318
           P+  +   YW+ +++CT+
Sbjct: 31  PKDHNGSIYWSMYHLCTV 48


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,886
Number of Sequences: 438
Number of extensions: 3647
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16381902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)