Samia BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0008_K12
         (648 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC8E11.04c |||phospholipase |Schizosaccharomyces pombe|chr 1||...   151   6e-38
SPAC9G1.08c |||phospholipase |Schizosaccharomyces pombe|chr 1|||...    44   2e-05
SPAC12G12.02 ||SPAC630.01c|rRNA processing protein, unnamed|Schi...    28   1.3  
SPAC6G10.03c |||abhydrolase family protein, unknown biological r...    27   2.3  
SPAC1834.07 |klp3|krp1|kinesin-like protein Klp3|Schizosaccharom...    27   3.1  
SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase Tor2|S...    26   4.1  
SPCC737.09c |hmt1|SPCC74.08c|ATP-binding cassette-type vacuolar ...    26   4.1  
SPAC959.06c |||sequence orphan|Schizosaccharomyces pombe|chr 1||...    26   5.4  
SPAC1399.04c |||uracil phosphoribosyltransferase |Schizosaccharo...    25   7.1  
SPAC823.10c |||mitochondrial carrier with solute carrier repeats...    25   9.4  
SPAC17G8.11c |||mannosyltransferase complex subunit |Schizosacch...    25   9.4  

>SPAC8E11.04c |||phospholipase |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 224

 Score =  151 bits (367), Expect = 6e-38
 Identities = 78/182 (42%), Positives = 116/182 (63%), Gaps = 4/182 (2%)
 Frame = +2

Query: 80  NPVIIASTARQTASLIFLHGLGDTGHGW---ASTIASIRGPHVKVICPTAATMSVTLNAG 250
           N VII  +   TA++IFLHGLGD+G GW   A+T ++ +  H+K I P A ++ VT+N G
Sbjct: 6   NSVIINPSVAHTATVIFLHGLGDSGQGWSFMANTWSNFK--HIKWIFPNAPSIPVTVNNG 63

Query: 251 FRMPSWFDLRSLDATAPEDEEGITRATSLVHGLIADEIKAGIPANRVLLGGFSQGGALAL 430
            +MP+W+D+ S      EDE GI R+   +H LI  E+  GIP++R+L+GGFSQG  ++L
Sbjct: 64  MKMPAWYDIYSFADMKREDENGILRSAGQLHELIDAELALGIPSDRILIGGFSQGCMVSL 123

Query: 431 HAALTYPERLAGVVSLSCWLPRHTHFPEEV-KAPLDIPIFQAHGDCDPVVPFKWGQMTAS 607
           +A LTYP+RLAG++  S +LP  + FP  + +   +IPI   +   DP+VP      +A 
Sbjct: 124 YAGLTYPKRLAGIMGHSGFLPLASKFPSALSRVAKEIPILLTYMTEDPIVPSVLSSASAK 183

Query: 608 FL 613
           +L
Sbjct: 184 YL 185


>SPAC9G1.08c |||phospholipase |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 241

 Score = 44.0 bits (99), Expect = 2e-05
 Identities = 35/148 (23%), Positives = 66/148 (44%), Gaps = 6/148 (4%)
 Frame = +2

Query: 122 LIFLHGLGDTGHGWASTIASIRGPHVKVIC---PTAATMSVTLNAGFRMPSWFDLRSLDA 292
           +I +HGLGD+   +A+   ++  P+   I    P    +      G  M  W +    D 
Sbjct: 27  VILMHGLGDSHKSFANMAKNVPLPNTSYISLRGPYRLPLDFENPGGNWM--WGEDVHFDQ 84

Query: 293 TAP-EDEEGITRATSLVHGLIADEIKAGIPANRVLLGGFSQGGALALHAA--LTYPERLA 463
               + E   +++ +++  LI + +  GI ++R+   GF QG  +AL++   L+   +L 
Sbjct: 85  NGELQSEADFSKSFTMISNLIGNLLSYGILSSRIFFFGFGQGAMVALYSCYKLSTKYQLG 144

Query: 464 GVVSLSCWLPRHTHFPEEVKAPLDIPIF 547
           G+ S    LP     P     P  +P++
Sbjct: 145 GIFSFGGTLPLSITLPNH---PFHVPVY 169


>SPAC12G12.02 ||SPAC630.01c|rRNA processing protein,
           unnamed|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 183

 Score = 27.9 bits (59), Expect = 1.3
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +1

Query: 184 QRSSCESNMSNCRNDVCYIKRWFP 255
           +R  CE +M  C+ D+ YIK + P
Sbjct: 94  KRKQCEKSMRKCQIDLMYIKEYPP 117


>SPAC6G10.03c |||abhydrolase family protein, unknown biological
           role|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 428

 Score = 27.1 bits (57), Expect = 2.3
 Identities = 13/39 (33%), Positives = 23/39 (58%)
 Frame = +2

Query: 365 KAGIPANRVLLGGFSQGGALALHAALTYPERLAGVVSLS 481
           + G    +++L G S GG L+   A+ YPER+  ++ +S
Sbjct: 166 RIGHGIEKMILVGHSMGGYLSAVYAMQYPERVEKLLLVS 204


>SPAC1834.07 |klp3|krp1|kinesin-like protein
           Klp3|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 554

 Score = 26.6 bits (56), Expect = 3.1
 Identities = 12/40 (30%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
 Frame = -3

Query: 643 HKLKVXHKSLQKRSCHLTPFERNDRVTI-SVRLENWYIQG 527
           +++KV +  +     H    E+NDR+T+   +L+  Y+QG
Sbjct: 127 YEVKVSYMEIYMEKIHDLLSEKNDRLTVHEDKLQGVYVQG 166


>SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase
            Tor2|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 2337

 Score = 26.2 bits (55), Expect = 4.1
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +2

Query: 476  LSCWLPRHTHFPEEVKAPLDIPIFQAH 556
            +SCW   + HF EE+   ++I +   H
Sbjct: 1173 VSCWSELYDHFQEELVKSIEIALTSPH 1199


>SPCC737.09c |hmt1|SPCC74.08c|ATP-binding cassette-type vacuolar
           membrane transporter Hmt1|Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 830

 Score = 26.2 bits (55), Expect = 4.1
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = +3

Query: 378 LQTECYWVVSLKVVLWHSMQH*LILNAWLE 467
           + T CY  V++K+  W +     ++N+W E
Sbjct: 413 IMTLCYCYVTVKITSWRTEARRKMVNSWRE 442


>SPAC959.06c |||sequence orphan|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 225

 Score = 25.8 bits (54), Expect = 5.4
 Identities = 15/59 (25%), Positives = 28/59 (47%)
 Frame = +2

Query: 269 FDLRSLDATAPEDEEGITRATSLVHGLIADEIKAGIPANRVLLGGFSQGGALALHAALT 445
           F +  LDAT         +  +++  L    I +      +LLGG+S G  +++H ++T
Sbjct: 60  FTVYVLDATTRRSALLSGKHDTMIFTLFVKYITSLNHPEYLLLGGYSYGARISMHKSIT 118


>SPAC1399.04c |||uracil phosphoribosyltransferase
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 220

 Score = 25.4 bits (53), Expect = 7.1
 Identities = 15/48 (31%), Positives = 21/48 (43%)
 Frame = -2

Query: 578 ERQGHNLRALGKLVYPRAPLLLQGNEYVLAASMTMTQLQPSVQDKLVL 435
           E   + L A      P   LL+Q +E    A +   +L    QD+LVL
Sbjct: 90  ESMEYGLAAACNYSVPVGKLLVQRDETTFEAKLMFCKLPKDAQDRLVL 137


>SPAC823.10c |||mitochondrial carrier with solute carrier
           repeats|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 296

 Score = 25.0 bits (52), Expect = 9.4
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -3

Query: 334 TGSSCYAFFIFW 299
           TGSSCY +F+ W
Sbjct: 80  TGSSCYFYFLNW 91


>SPAC17G8.11c |||mannosyltransferase complex subunit
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 356

 Score = 25.0 bits (52), Expect = 9.4
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = +3

Query: 66  EVWNLILLLLPQRPDKQHH*YF 131
           E W+ I +++P+  +K HH +F
Sbjct: 225 EAWHHIWVMVPELYEKSHHAFF 246


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,765,863
Number of Sequences: 5004
Number of extensions: 58016
Number of successful extensions: 144
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 140
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 142
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 291768710
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)