Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_K12
(648 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_1530 - 34182235-34182336,34182436-34182543,34183627-341837... 107 6e-24
01_01_0524 - 3845637-3845727,3845803-3845896,3846415-3846497,384... 106 1e-23
01_05_0685 + 24273331-24273569,24275429-24275465,24275739-242758... 104 7e-23
04_01_0383 + 5085697-5085724,5085816-5085927,5087249-5087285,508... 101 7e-22
05_07_0299 - 29073900-29073984,29074125-29074158,29074269-290743... 99 2e-21
04_04_1531 - 34184899-34185030,34185130-34185240,34185344-341854... 89 4e-18
04_04_1532 - 34187153-34187308,34187426-34187551,34187856-341879... 67 1e-11
01_06_0962 + 33402971-33403345,33403633-33403767,33408316-33408597 38 0.009
02_04_0371 + 22434710-22435102,22435428-22435624,22435707-224358... 36 0.037
01_05_0331 - 21057957-21058205,21059213-21059791 36 0.037
05_04_0074 - 17677298-17677591,17679060-17679197,17682705-17683130 35 0.064
08_02_1422 - 26971803-26971900,26974083-26975061 33 0.15
05_04_0076 - 17697893-17697922,17698312-17698707 33 0.20
08_02_1411 + 26880766-26880911,26881000-26881097,26881207-268812... 33 0.26
05_06_0117 - 25728193-25728230,25728795-25728867,25729113-257292... 30 1.8
11_05_0100 - 19056465-19056470,19057043-19057276,19058391-190585... 29 2.4
11_08_0079 + 28189782-28189907,28190445-28190553,28190876-281909... 29 3.2
11_05_0099 - 19044772-19044837,19044896-19045051,19045529-190456... 29 3.2
06_03_1033 - 27035977-27036144,27036420-27036544,27036695-270367... 29 3.2
02_02_0279 - 8507603-8507620,8508040-8508060,8508613-8508835,850... 29 3.2
07_03_0955 + 22867448-22868248 29 4.2
03_04_0205 - 18485933-18488446 28 5.6
08_02_1287 - 25886509-25886766,25886887-25887004,25887098-258871... 28 7.4
02_05_1073 - 33895608-33895880,33896133-33896180,33896273-338965... 28 7.4
07_03_1003 + 23239829-23240121,23240257-23240349,23240785-232409... 27 9.7
06_01_0579 + 4099039-4099086,4099798-4099848,4100151-4100286,410... 27 9.7
05_01_0329 - 2580083-2580115,2580787-2580864,2580986-2581078,258... 27 9.7
03_06_0542 - 34611864-34612364,34613932-34614132,34614745-34615059 27 9.7
>04_04_1530 -
34182235-34182336,34182436-34182543,34183627-34183748,
34183817-34183961,34184045-34184097,34184187-34184478
Length = 273
Score = 107 bits (258), Expect = 6e-24
Identities = 71/201 (35%), Positives = 100/201 (49%), Gaps = 13/201 (6%)
Frame = +2
Query: 77 PNPVIIASTARQTASLIFLHGLGDTGHGWASTIASIRGPHVKVI---CPTAATMSVTLNA 247
P P+ A+ AR + +++LHGLGD+G P ++ P+A V+ N
Sbjct: 40 PAPMA-AAAARNRSFVLWLHGLGDSGPANEPIRNFFSAPEFRLTKWAFPSAPNSPVSCNH 98
Query: 248 GFRMPSWFDLRSLDATA--PEDEEGITRATSLVHGLIADEIKAGIPANRVLLGGFSQGG- 418
G MPSWFD+ L ++ P+D+ G+ +A VH +I E+ GIP + + GFSQGG
Sbjct: 99 GAVMPSWFDIHELPMSSGSPQDDSGVLKAVENVHAMIDKEVADGIPPENIFVCGFSQGGR 158
Query: 419 ALALHAALT------YPERLAGVVSLSCWLPRHTHFPEEVKAPL-DIPIFQAHGDCDPVV 577
ALH ALT YP+ L G S WLP + E + PI +HG D VV
Sbjct: 159 TSALHCALTLASVLLYPKTLGGGAVFSGWLPFGSSVTERISPEARKTPILWSHGIADNVV 218
Query: 578 PFKWGQMTASFLKTFMXNLEF 640
F+ GQ FL+ + EF
Sbjct: 219 LFEAGQAGPPFLQNAGFSCEF 239
>01_01_0524 -
3845637-3845727,3845803-3845896,3846415-3846497,
3846587-3846737,3847113-3847217,3847351-3847420,
3847551-3847587,3848155-3848257,3848441-3848480
Length = 257
Score = 106 bits (255), Expect = 1e-23
Identities = 65/196 (33%), Positives = 102/196 (52%), Gaps = 19/196 (9%)
Frame = +2
Query: 89 IIASTARQTASLIFLHGLGDTGHGWASTIASIRGPHVKVICPTAATMSVTLNAGFRMPSW 268
++ A++++LHGLGD G W+ + ++ P++K ICPTA T V + GF +W
Sbjct: 25 VVRPKGAHKATIVWLHGLGDNGASWSQLLETLPLPNIKWICPTAPTRPVAVFGGFPSTAW 84
Query: 269 FDLRSLDATAPEDEEGITRATSLVHGLIADEIKAGIPAN-RVLLGGFSQGGALALHAAL- 442
FD+ L AP+D EG+ + + V L++ E PA+ ++ +GGFS G A AL++A
Sbjct: 85 FDVADLSEDAPDDVEGLDASAAHVANLLSTE-----PADIKLGVGGFSMGAATALYSATC 139
Query: 443 ----------TYPERLAGVVSLSCWLPRHTHFPEEVKAPLD-------IPIFQAHGDCDP 571
YP L+ V LS WLP ++++ + IP+ HG D
Sbjct: 140 YAHGKYGNGNPYPVNLSVSVGLSGWLPCARSLKNKIESSQEAAQKASSIPLLLCHGKADD 199
Query: 572 VVPFKWGQMTASFLKT 619
VV +K G+ +A LKT
Sbjct: 200 VVLYKHGEKSADALKT 215
>01_05_0685 +
24273331-24273569,24275429-24275465,24275739-24275808,
24275978-24276082,24276205-24276355,24276454-24276536,
24276619-24276712,24276796-24276883
Length = 288
Score = 104 bits (249), Expect = 7e-23
Identities = 62/195 (31%), Positives = 100/195 (51%), Gaps = 19/195 (9%)
Frame = +2
Query: 89 IIASTARQTASLIFLHGLGDTGHGWASTIASIRGPHVKVICPTAATMSVTLNAGFRMPSW 268
++ R A++++LHGLGD G W+ + S+ P++K ICPTA T V GF +W
Sbjct: 57 VVRPKGRHQATIVWLHGLGDNGASWSQLLDSLPLPNIKWICPTAPTRPVAAFGGFPCTAW 116
Query: 269 FDLRSLDATAPEDEEGITRATSLVHGLIADEIKAGIPAN-RVLLGGFSQGGALALHAA-- 439
FD+ +D EG+ + + V L++ E P++ ++ +GGFS G A ALH+A
Sbjct: 117 FDVEDTSVDGRDDIEGLDASAAHVANLLSSE-----PSDVKLGIGGFSMGAAAALHSAAC 171
Query: 440 ---------LTYPERLAGVVSLSCWLPRHTHFPEEVKAPLD-------IPIFQAHGDCDP 571
+ YP L+ V+ LS WLP ++ + +PI +HG D
Sbjct: 172 YAHGRFTNGVAYPVTLSAVIGLSGWLPCSRTLKSKMDSSQTALRRAGALPILLSHGRADE 231
Query: 572 VVPFKWGQMTASFLK 616
VV ++ G+ +A FL+
Sbjct: 232 VVTYRNGEKSADFLR 246
>04_01_0383 +
5085697-5085724,5085816-5085927,5087249-5087285,
5087512-5087581,5087704-5087808,5088022-5088172,
5088257-5088339,5089152-5089372,5089465-5089501,
5089668-5089753
Length = 309
Score = 101 bits (241), Expect = 7e-22
Identities = 54/146 (36%), Positives = 81/146 (55%), Gaps = 11/146 (7%)
Frame = +2
Query: 89 IIASTARQTASLIFLHGLGDTGHGWASTIASIRGPHVKVICPTAATMSVTLNAGFRMPSW 268
I+ R A++++LHGLGD G W+ + S+ P++K ICPTAAT VT GF +W
Sbjct: 24 IVRPKGRHQATIVWLHGLGDNGASWSQLLDSLSLPNIKWICPTAATRPVTAFGGFPCTAW 83
Query: 269 FDLRSLDATAPEDEEGITRATSLVHGLIADEIKAGIPANRVLLGGFSQGGALALHAA--- 439
FD+ + +D EG+ + + + L++ E P ++ +GGFS G A ALH+A
Sbjct: 84 FDVEDISVDGRDDIEGLDASAAHIANLLSSE----PPDVKLGIGGFSMGAAAALHSAACY 139
Query: 440 --------LTYPERLAGVVSLSCWLP 493
+ YP L+ V+SLS WLP
Sbjct: 140 AHGKFANSMPYPITLSAVISLSGWLP 165
>05_07_0299 -
29073900-29073984,29074125-29074158,29074269-29074351,
29074457-29074607,29074853-29074957,29075099-29075168,
29075374-29075410,29076732-29076843,29076956-29076983
Length = 234
Score = 99 bits (238), Expect = 2e-21
Identities = 60/184 (32%), Positives = 94/184 (51%), Gaps = 18/184 (9%)
Frame = +2
Query: 89 IIASTARQTASLIFLHGLGDTGHGWASTIASIRGPHVKVICPTAATMSVTLNAGFRMPSW 268
++ R A++++LHGLGD G W+ + S+ P++K ICPTAAT VT GF +W
Sbjct: 24 VVRPKGRHQATIVWLHGLGDNGASWSQLLDSLSLPNIKWICPTAATQPVTAFGGFPCTAW 83
Query: 269 FDLRSLDATAPEDEEGITRATSLVHGLIADEIKAGIPANRVLLGGFSQGGALALHAA--- 439
FD+ +D EG+ + + + L++ E P ++ +GGFS G A +L++A
Sbjct: 84 FDVEDTSVDGRDDIEGLDASAAHIANLLSSE----PPDVKLGIGGFSMGAAASLYSAACY 139
Query: 440 --------LTYPERLAGVVSLSCWLP--RHTHFPEE-----VKAPLDIPIFQAHGDCDPV 574
+ YP L+ V+SLS WLP R E + +PI +HG D V
Sbjct: 140 AHGKFASGIPYPITLSAVISLSGWLPCSRTLRGKMESSHIAARRAASLPILLSHGRADEV 199
Query: 575 VPFK 586
V ++
Sbjct: 200 VSYR 203
>04_04_1531 -
34184899-34185030,34185130-34185240,34185344-34185465,
34185541-34185664,34185815-34185867,34185984-34186146
Length = 234
Score = 88.6 bits (210), Expect = 4e-18
Identities = 58/180 (32%), Positives = 87/180 (48%), Gaps = 7/180 (3%)
Frame = +2
Query: 122 LIFLHGLGDTGHGWASTIAS-IRGPH---VKVICPTAATMSVTLNAGFRMPSWFDLRSLD 289
+++LHG G TG + +A P V+ PTA T S+ G + +WF + +
Sbjct: 10 VLWLHGSGQTGEESRAQVAPYFAAPELASVRFSFPTAPTSSIPCYGGEVITAWFAIPEVP 69
Query: 290 ATA--PEDEEGITRATSLVHGLIADEIKAGIPANRVLLGGFSQGGALALHAALTYPERLA 463
TA DE+ + +A VH ++ E+ AG + + + G SQGGALA+ + L YP L
Sbjct: 70 ITARTARDEKEVLKAVERVHEMLDGEVAAGTSPSNIFVCGLSQGGALAIASVLLYPMTLG 129
Query: 464 GVVSLSCWLPRHTHFPEEVKAPL-DIPIFQAHGDCDPVVPFKWGQMTASFLKTFMXNLEF 640
G V S LP F E + + P+ HG D VV F+ G +FL+ + EF
Sbjct: 130 GCVVFSGSLPLSKTFAESIPSEARKTPVLWFHGMADGVVLFEAGHAGCAFLQEIGMHCEF 189
>04_04_1532 -
34187153-34187308,34187426-34187551,34187856-34187977,
34188058-34188181,34189671-34189821,34190506-34190720,
34191142-34191343,34191423-34191597,34191746-34192055,
34192141-34192356
Length = 598
Score = 67.3 bits (157), Expect = 1e-11
Identities = 41/119 (34%), Positives = 57/119 (47%), Gaps = 7/119 (5%)
Frame = +2
Query: 305 DEEGITRATSLVHGLIADEIKAGIPANRVLLGGFSQGGALALHAALTYPERLAGVVSLSC 484
DEE + RA VH +I EI AG V + G SQGGAL + + L +P+ L G S
Sbjct: 428 DEEDVLRAVQSVHAMIDREIAAGTNPQDVFVFGLSQGGALGIASVLLHPKTLGGCAVFSG 487
Query: 485 WLPRHTHFPEEVKAP-------LDIPIFQAHGDCDPVVPFKWGQMTASFLKTFMXNLEF 640
+LP ++ F V A L P+ HG ++P K G+ FL+ + EF
Sbjct: 488 FLPFNSSFAVRVTAQAKKLQCGLQTPVLWIHGQAGSLIPIKEGRDGIKFLRGLGMSCEF 546
>01_06_0962 + 33402971-33403345,33403633-33403767,33408316-33408597
Length = 263
Score = 37.5 bits (83), Expect = 0.009
Identities = 18/48 (37%), Positives = 26/48 (54%)
Frame = +2
Query: 377 PANRVLLGGFSQGGALALHAALTYPERLAGVVSLSCWLPRHTHFPEEV 520
P +V+L G S GG AA +P+++A V L ++P HT P V
Sbjct: 75 PGEKVVLVGHSLGGINVALAAELFPDKIAAAVFLCAFMPDHTSRPSHV 122
>02_04_0371 + 22434710-22435102,22435428-22435624,22435707-22435824,
22436458-22436574,22436702-22436803,22437431-22437487,
22437976-22438044,22438423-22438533,22438597-22438791,
22439023-22439121,22439656-22440222,22440344-22440568,
22441036-22441338,22441640-22441707,22441947-22442105,
22442230-22442475,22442549-22442680,22443243-22443351,
22444131-22444283,22444359-22444601,22444695-22444862,
22445013-22445156,22445238-22445699,22446495-22446791,
22446867-22447024,22447139-22447246,22447474-22447732
Length = 1752
Score = 35.5 bits (78), Expect = 0.037
Identities = 32/120 (26%), Positives = 53/120 (44%)
Frame = +2
Query: 122 LIFLHGLGDTGHGWASTIASIRGPHVKVICPTAATMSVTLNAGFRMPSWFDLRSLDATAP 301
++FLHG T W P +K + P+A ++V L P + L
Sbjct: 1483 ILFLHGFLGTSEDWV--------PMMKALSPSARVIAVDL------PGHGESEILQHDV- 1527
Query: 302 EDEEGITRATSLVHGLIADEIKAGIPANRVLLGGFSQGGALALHAALTYPERLAGVVSLS 481
E+ I+ + V L+ I+ I V++ G+S G +ALH AL +++G V +S
Sbjct: 1528 ENSNQISFSVQSVADLLLKLIR-NITDGAVVVVGYSMGARIALHMALNQNHKISGAVIIS 1586
>01_05_0331 - 21057957-21058205,21059213-21059791
Length = 275
Score = 35.5 bits (78), Expect = 0.037
Identities = 22/71 (30%), Positives = 35/71 (49%)
Frame = +2
Query: 350 IADEIKAGIPANRVLLGGFSQGGALALHAALTYPERLAGVVSLSCWLPRHTHFPEEVKAP 529
+ D ++A R +L G S GG AA T+P+++A V ++ +LP + P P
Sbjct: 70 LLDAVRALPDGERAVLVGHSFGGMSVALAAETFPDKVAAAVFVAAFLPDCANPPSH---P 126
Query: 530 LDIPIFQAHGD 562
+D I H D
Sbjct: 127 IDTVINSYHDD 137
>05_04_0074 - 17677298-17677591,17679060-17679197,17682705-17683130
Length = 285
Score = 34.7 bits (76), Expect = 0.064
Identities = 19/41 (46%), Positives = 24/41 (58%)
Frame = +2
Query: 371 GIPANRVLLGGFSQGGALALHAALTYPERLAGVVSLSCWLP 493
G RV+L G SQGG AA +PER+A VV L+ +P
Sbjct: 90 GDDEERVVLVGHSQGGFSVALAAERFPERVAAVVFLTAAMP 130
>08_02_1422 - 26971803-26971900,26974083-26975061
Length = 358
Score = 33.5 bits (73), Expect = 0.15
Identities = 18/52 (34%), Positives = 25/52 (48%)
Frame = +2
Query: 131 LHGLGDTGHGWASTIASIRGPHVKVICPTAATMSVTLNAGFRMPSWFDLRSL 286
LHG GD G W+S++ + PHV + P + N G FDL +L
Sbjct: 112 LHGYGDNGESWSSSLEQVPLPHVYPL-PVIEEFGIVPNGG----KHFDLAAL 158
>05_04_0076 - 17697893-17697922,17698312-17698707
Length = 141
Score = 33.1 bits (72), Expect = 0.20
Identities = 18/36 (50%), Positives = 22/36 (61%)
Frame = +2
Query: 386 RVLLGGFSQGGALALHAALTYPERLAGVVSLSCWLP 493
RV+L G S GG AA +PERLA VV L+ +P
Sbjct: 85 RVVLVGHSHGGFSVALAAEWFPERLAAVVFLTASMP 120
>08_02_1411 +
26880766-26880911,26881000-26881097,26881207-26881274,
26881595-26881683,26881786-26882007,26883056-26883790,
26883880-26884078,26884319-26884404,26886175-26886536,
26887290-26887921
Length = 878
Score = 32.7 bits (71), Expect = 0.26
Identities = 32/100 (32%), Positives = 45/100 (45%), Gaps = 16/100 (16%)
Frame = +2
Query: 290 ATAPEDEEGITRATSLVH---GLIADEIKAGIPANRVLLGGF--SQGGALALHAA----- 439
ATAPE ++ R + G A EI+ + A RV LG F ++ A A AA
Sbjct: 688 ATAPEQQQPRRRYRGVRQRPWGKWAAEIRDPVKAARVWLGTFDTAEDAARAYDAAAVRFK 747
Query: 440 -----LTYPERLAGVVSLSCWLPR-HTHFPEEVKAPLDIP 541
+ +P+ +AG + LPR H H P PL +P
Sbjct: 748 GSKAKVNFPDEVAGASIAAVQLPRHHQHHPPTSLPPLPVP 787
>05_06_0117 -
25728193-25728230,25728795-25728867,25729113-25729242,
25729368-25729439,25730114-25730152,25730340-25730408,
25730504-25730634,25732784-25732890,25734194-25734289,
25734762-25734903
Length = 298
Score = 29.9 bits (64), Expect = 1.8
Identities = 24/96 (25%), Positives = 42/96 (43%), Gaps = 3/96 (3%)
Frame = +2
Query: 74 EPNPVIIASTARQTASLIFLHGLGD-TGHGWAST--IASIRGPHVKVICPTAATMSVTLN 244
EP+ I ++ + F + G+ G A+T +A + G ++++ AA ++V
Sbjct: 190 EPHIASIGASRVKNECTSFRNFCGEENAEGLAATAAVAVVNGCRLQLVSTAAAAVAVATR 249
Query: 245 AGFRMPSWFDLRSLDATAPEDEEGITRATSLVHGLI 352
A R + L PE EEG R + V L+
Sbjct: 250 ASNRPDHYGKTNKLHEILPESEEGACRPQAEVGVLL 285
>11_05_0100 -
19056465-19056470,19057043-19057276,19058391-19058546,
19059639-19059763,19059912-19059983,19060080-19060184,
19060691-19060745,19061576-19061656,19062806-19062869,
19064715-19064782,19064947-19065033,19066121-19066285,
19066310-19066429,19066485-19066607,19066738-19067019,
19067936-19068075,19068234-19068335,19068802-19068874,
19069061-19069171
Length = 722
Score = 29.5 bits (63), Expect = 2.4
Identities = 23/70 (32%), Positives = 32/70 (45%), Gaps = 6/70 (8%)
Frame = +2
Query: 89 IIASTARQTASLIFLHGLGDTGHGWASTIASIRGPHVKVICPTA------ATMSVTLNAG 250
I+A T + L + HG TGHG S + GPH P+A A+M+VT G
Sbjct: 496 ILARTPLWKSGLDYRHG---TGHGVGSYLTVHEGPHQISFRPSARNVPLQASMTVTDEPG 552
Query: 251 FRMPSWFDLR 280
+ F +R
Sbjct: 553 YYQDGSFGIR 562
>11_08_0079 +
28189782-28189907,28190445-28190553,28190876-28190958,
28191500-28191562,28191658-28192854,28193247-28193310,
28193338-28193426,28194404-28194463,28195442-28195547,
28196057-28196069,28196940-28197111
Length = 693
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +2
Query: 227 MSVTLNAGFRMPSWFDLRSLDATAPEDEEGITRATSLVHGLIADE 361
++ TLN +P W LR L +EG+T+ SL+ DE
Sbjct: 427 LAATLNGRKGVPPWEQLRDLVVELEHYQEGLTKRPSLIVANKIDE 471
>11_05_0099 -
19044772-19044837,19044896-19045051,19045529-19045653,
19045773-19045844,19045947-19046051,19046509-19046563,
19047334-19047414,19047499-19047633,19048279-19048342,
19048844-19048911,19049082-19049168,19050247-19050501,
19050616-19050738,19050866-19051150,19051712-19051851,
19052385-19052445,19052537-19052637,19052807-19052870,
19053020-19053127
Length = 716
Score = 29.1 bits (62), Expect = 3.2
Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 6/70 (8%)
Frame = +2
Query: 89 IIASTARQTASLIFLHGLGDTGHGWASTIASIRGPHVKVICPTA------ATMSVTLNAG 250
I+A T + L + HG TGHG S + GPH+ P+A A+M+VT G
Sbjct: 548 ILARTPLWRSGLDYRHG---TGHGIGSYLNVHEGPHLISFRPSARNIPLQASMTVTDEPG 604
Query: 251 FRMPSWFDLR 280
+ F +R
Sbjct: 605 YYEDGSFGIR 614
>06_03_1033 -
27035977-27036144,27036420-27036544,27036695-27036766,
27036872-27036976,27037513-27037567,27038196-27038276,
27039109-27039159,27039531-27039594,27040783-27040850,
27040993-27041079,27041401-27041655,27041768-27041890,
27042013-27042297,27042948-27043087,27043696-27043759,
27043929-27044048
Length = 620
Score = 29.1 bits (62), Expect = 3.2
Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 6/70 (8%)
Frame = +2
Query: 89 IIASTARQTASLIFLHGLGDTGHGWASTIASIRGPHVKVICPTA------ATMSVTLNAG 250
I+A T + L + HG TGHG S + GPH+ P+A A+M+VT G
Sbjct: 470 ILARTPLWRSGLDYRHG---TGHGIGSYLNVHEGPHLISFRPSARNVPLQASMTVTDEPG 526
Query: 251 FRMPSWFDLR 280
+ F +R
Sbjct: 527 YYEDGSFGIR 536
>02_02_0279 - 8507603-8507620,8508040-8508060,8508613-8508835,
8509204-8509553,8509631-8509729,8509811-8510105,
8510200-8510405,8510498-8510689,8510766-8511163,
8511258-8511444,8511473-8511528,8511800-8511872,
8512012-8512872,8514353-8514778
Length = 1134
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = +2
Query: 188 GPHVKVICPTAATMSVTLNAGFRMPSWFDLRSLDATAPE 304
GP K PT+A + L+ P W LRS A+ PE
Sbjct: 1061 GPRPKRPSPTSAPGGLALSVARSAPLWLALRSKPASHPE 1099
>07_03_0955 + 22867448-22868248
Length = 266
Score = 28.7 bits (61), Expect = 4.2
Identities = 26/76 (34%), Positives = 31/76 (40%)
Frame = +2
Query: 377 PANRVLLGGFSQGGALALHAALTYPERLAGVVSLSCWLPRHTHFPEEVKAPLDIPIFQAH 556
P + LG + LAL AAL P A + L LP H A L+ P+ A
Sbjct: 99 PLGILELGSGTGAAGLALAAAL--PAH-AVLSDLPAALPNLRH-----NASLNAPLLDAR 150
Query: 557 GDCDPVVPFKWGQMTA 604
G VVP WG A
Sbjct: 151 GGSVSVVPLPWGDAAA 166
>03_04_0205 - 18485933-18488446
Length = 837
Score = 28.3 bits (60), Expect = 5.6
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = -1
Query: 579 GTTGSQSPCAWKIGISKGAFTSSG 508
G G CAWK+G AF SG
Sbjct: 179 GLAGGVHSCAWKLGHDHNAFVGSG 202
>08_02_1287 -
25886509-25886766,25886887-25887004,25887098-25887177,
25887258-25887338,25887493-25887576,25888013-25888171,
25888660-25888752,25888928-25888945,25889194-25889280,
25889634-25889760,25889849-25889920,25890319-25890404,
25890519-25890626,25890709-25890850,25891432-25891508,
25891902-25892054,25892411-25892503,25892608-25892790,
25892924-25893334
Length = 809
Score = 27.9 bits (59), Expect = 7.4
Identities = 27/90 (30%), Positives = 39/90 (43%), Gaps = 3/90 (3%)
Frame = +2
Query: 302 EDEEGITRATSLVHGLIADEIKAGIPANRVLLGGFSQGGALALHAALTYPERLAG--VVS 475
++EEG+ V ++ E A A RVL G + GA AL + + AG S
Sbjct: 67 DEEEGVEEEEEEVEAVVMPERYALGGACRVLAGMPAPLGATALDGGVNFAVYSAGASAAS 126
Query: 476 LSCWLPRHTHFPEEV-KAPLDIPIFQAHGD 562
L + P E + PLD P+F G+
Sbjct: 127 LCLFTPDDLEADEVTEEVPLD-PLFNRTGN 155
>02_05_1073 -
33895608-33895880,33896133-33896180,33896273-33896509,
33897233-33897269,33898603-33898913
Length = 301
Score = 27.9 bits (59), Expect = 7.4
Identities = 15/58 (25%), Positives = 29/58 (50%)
Frame = +2
Query: 422 LALHAALTYPERLAGVVSLSCWLPRHTHFPEEVKAPLDIPIFQAHGDCDPVVPFKWGQ 595
+ LH+A+ R+ V ++ W + +++K +D P+ HG D +V F G+
Sbjct: 169 VVLHSAILSGIRVLYPVKVTLWFDIFKNI-DKIKQ-VDCPVLVIHGTADDIVDFSHGK 224
>07_03_1003 +
23239829-23240121,23240257-23240349,23240785-23240993,
23241585-23241729,23241809-23241881,23242165-23242311,
23242411-23242536,23242653-23242712
Length = 381
Score = 27.5 bits (58), Expect = 9.7
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 509 PEEVKAPLDIPIFQAHGDCDPVVPFKWGQMTASF 610
PEE+ + P+ A G+ DP P + G+ ASF
Sbjct: 312 PEELLPRVKCPVLVAWGEKDPWEPVELGRAYASF 345
>06_01_0579 +
4099039-4099086,4099798-4099848,4100151-4100286,
4100287-4100401,4100496-4100528,4101037-4101166,
4101663-4101751,4102042-4102148,4102238-4102309,
4102384-4102764,4104907-4105064,4105581-4105674,
4106082-4106089,4106297-4106387,4107136-4107289,
4108257-4108377,4108468-4108551,4108946-4109065,
4109181-4109393,4109482-4109544,4109668-4109783,
4110132-4110190,4111126-4111445
Length = 920
Score = 27.5 bits (58), Expect = 9.7
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = +2
Query: 257 MPSWFDLRSLDATAPEDEEGITRATSLVHGLIADEIKAGIPAN 385
M +W L+ +P+ EEGI + L H I EI AG +N
Sbjct: 807 MHAWLRLKGYRTLSPDVEEGICQV--LAHMWIESEIIAGSGSN 847
>05_01_0329 -
2580083-2580115,2580787-2580864,2580986-2581078,
2581209-2581326,2583350-2583440,2585167-2585207,
2585854-2585981,2586078-2586353,2587318-2587472,
2587557-2587700,2587991-2588567
Length = 577
Score = 27.5 bits (58), Expect = 9.7
Identities = 28/101 (27%), Positives = 43/101 (42%), Gaps = 3/101 (2%)
Frame = +2
Query: 146 DTGHGWASTIASIRGPHVKVICPTAATMSVTLNAGFRMPSWFDLRSLDATAPEDEEGITR 325
D G G +++AS + +A S TL A + +D E+EEG+
Sbjct: 30 DGGSGVVASLASQSAARAERSERRSAKRSATL-ADQSSEGERAAKKMDLGVHEEEEGVKV 88
Query: 326 ATSLVHGLIADEIKAGIPANRVLLGGFS---QGGALALHAA 439
A +A+E + G GG + +GGALAL +A
Sbjct: 89 APPSASASVAEEQQGGKGGEDDGFGGSAGGGEGGALALPSA 129
>03_06_0542 - 34611864-34612364,34613932-34614132,34614745-34615059
Length = 338
Score = 27.5 bits (58), Expect = 9.7
Identities = 31/129 (24%), Positives = 53/129 (41%), Gaps = 1/129 (0%)
Frame = +2
Query: 116 ASLIFLHGLGDTGHGWASTIASIRGPHVKVICPTAATMSVTLNAGFRMPSWFDLRSL-DA 292
A+++FLHG + + W + + G + + P DLR D
Sbjct: 36 AAVLFLHGFPELWYSWRHQMEHLAGRGFRCLAP-------------------DLRGYGDT 76
Query: 293 TAPEDEEGITRATSLVHGLIADEIKAGIPANRVLLGGFSQGGALALHAALTYPERLAGVV 472
AP + E + A +V L+A G+ +V + G G +A + L P+R+ +V
Sbjct: 77 DAPPEIESYS-AFHVVGDLVALLDALGLA--KVFVVGHDWGAIIAWYMCLFRPDRVTALV 133
Query: 473 SLSCWLPRH 499
+ S RH
Sbjct: 134 NTSVAFMRH 142
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,369,870
Number of Sequences: 37544
Number of extensions: 400960
Number of successful extensions: 1060
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1022
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1046
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1608522592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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