Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_K11
(486 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC26A3.07c |rpl1101|rpl11-1, rpl11|60S ribosomal protein L11|S... 122 2e-29
SPBC17G9.10 |rpl1102|rpl11-2|60S ribosomal protein L11|Schizosac... 122 2e-29
SPAC20H4.08 |||phosphatase activator |Schizosaccharomyces pombe|... 32 0.040
SPAC24C9.06c |||aconitate hydratase|Schizosaccharomyces pombe|ch... 25 4.6
SPBC32H8.11 |mei4||meiotic forkhead transcription factor Mei4 |S... 25 4.6
SPAC2E1P3.02c |amt3||ammonium transporter Amt3|Schizosaccharomyc... 25 6.1
SPCC5E4.04 |cut1||separase|Schizosaccharomyces pombe|chr 3|||Manual 25 6.1
SPAC521.02 |||WLM domain protein|Schizosaccharomyces pombe|chr 1... 25 6.1
SPAC3C7.10 |pex13||peroxin-13|Schizosaccharomyces pombe|chr 1|||... 25 6.1
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 25 6.1
SPAC31G5.15 |||phosphatidylserine decarboxylase |Schizosaccharom... 25 8.0
SPAC1F5.09c |shk2|pak2|PAK-related kinase Shk2 |Schizosaccharomy... 25 8.0
SPCC1393.08 |||transcription factor, zf-GATA type |Schizosacchar... 25 8.0
SPAC13G6.01c |rad8|SPAC5H10.14c|ubiquitin-protein ligase E3 |Sch... 25 8.0
SPCC1322.03 |||TRP-like ion channel|Schizosaccharomyces pombe|ch... 25 8.0
SPCC1620.12c |||GTPase activating protein |Schizosaccharomyces p... 25 8.0
>SPAC26A3.07c |rpl1101|rpl11-1, rpl11|60S ribosomal protein
L11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 174
Score = 122 bits (295), Expect = 2e-29
Identities = 55/64 (85%), Positives = 60/64 (93%)
Frame = +2
Query: 290 AEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPG 469
AEEILERGLKV+EYEL++ NFSATGNFGFGIQEHIDLGIKYDPSIGIYG+DFYVV+ RPG
Sbjct: 76 AEEILERGLKVKEYELKKRNFSATGNFGFGIQEHIDLGIKYDPSIGIYGMDFYVVMDRPG 135
Query: 470 FNVA 481
VA
Sbjct: 136 MRVA 139
Score = 111 bits (268), Expect = 4e-26
Identities = 54/71 (76%), Positives = 60/71 (84%)
Frame = +1
Query: 76 SKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEK 255
++N M+ L I KL LNI +GESGDRLTRAAKVLEQL+GQ PVFSKARYT+R FGIRRNEK
Sbjct: 5 AQNPMKELRISKLVLNISLGESGDRLTRAAKVLEQLSGQTPVFSKARYTIRRFGIRRNEK 64
Query: 256 IAVHCTVRGAK 288
IA H TVRG K
Sbjct: 65 IACHVTVRGPK 75
>SPBC17G9.10 |rpl1102|rpl11-2|60S ribosomal protein
L11|Schizosaccharomyces pombe|chr 2|||Manual
Length = 174
Score = 122 bits (295), Expect = 2e-29
Identities = 55/64 (85%), Positives = 60/64 (93%)
Frame = +2
Query: 290 AEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPG 469
AEEILERGLKV+EYEL++ NFSATGNFGFGIQEHIDLGIKYDPSIGIYG+DFYVV+ RPG
Sbjct: 76 AEEILERGLKVKEYELKKRNFSATGNFGFGIQEHIDLGIKYDPSIGIYGMDFYVVMDRPG 135
Query: 470 FNVA 481
VA
Sbjct: 136 MRVA 139
Score = 111 bits (268), Expect = 4e-26
Identities = 54/71 (76%), Positives = 60/71 (84%)
Frame = +1
Query: 76 SKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEK 255
++N M+ L I KL LNI +GESGDRLTRAAKVLEQL+GQ PVFSKARYT+R FGIRRNEK
Sbjct: 5 AQNPMKELRISKLVLNISLGESGDRLTRAAKVLEQLSGQTPVFSKARYTIRRFGIRRNEK 64
Query: 256 IAVHCTVRGAK 288
IA H TVRG K
Sbjct: 65 IACHVTVRGPK 75
>SPAC20H4.08 |||phosphatase activator |Schizosaccharomyces pombe|chr
1|||Manual
Length = 270
Score = 32.3 bits (70), Expect = 0.040
Identities = 16/60 (26%), Positives = 29/60 (48%)
Frame = -1
Query: 405 IPKSMCSWIPKPKLPVAEKLSRLNSYSLTFNPLSRISSALSTSNSAMDSNLFITTNTKRP 226
I S+C WI LP+ +K + + FNP+S + L + N+++ + K+P
Sbjct: 81 IDPSICKWILDTYLPLFKKSNNAYPSKIAFNPISNTTLVLFLTECC---NIYLFSENKKP 137
>SPAC24C9.06c |||aconitate hydratase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 778
Score = 25.4 bits (53), Expect = 4.6
Identities = 13/48 (27%), Positives = 20/48 (41%)
Frame = +1
Query: 100 HIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIR 243
H++ + N +G A K+ +QLTG+ R GIR
Sbjct: 604 HLQNISNNYMIGAINAENGEANKLKDQLTGEYKTVPNVAIDYRDHGIR 651
>SPBC32H8.11 |mei4||meiotic forkhead transcription factor Mei4
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 517
Score = 25.4 bits (53), Expect = 4.6
Identities = 21/50 (42%), Positives = 26/50 (52%), Gaps = 5/50 (10%)
Frame = -1
Query: 402 PKSMCSWIPKP----KLPVAEKLSRLNSY-SLTFNPLSRISSALSTSNSA 268
P S C I KP ++P+A K SRLNS+ S T S + A SN A
Sbjct: 184 PSSKCHEI-KPLTTREIPLARKRSRLNSFNSSTSTSGSSSNVAAEVSNDA 232
>SPAC2E1P3.02c |amt3||ammonium transporter Amt3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 517
Score = 25.0 bits (52), Expect = 6.1
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = +1
Query: 424 WYLWFGFLRCSWSTRF 471
W WFGF SW F
Sbjct: 242 WKRWFGFKSVSWKNSF 257
>SPCC5E4.04 |cut1||separase|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1828
Score = 25.0 bits (52), Expect = 6.1
Identities = 11/39 (28%), Positives = 24/39 (61%)
Frame = +2
Query: 215 DTL*GLLVFVVMKRLLSIALFEVLSAEEILERGLKVREY 331
DT+ L + ++ +LS + ++L +E+L LK+R++
Sbjct: 463 DTVFALNISEILSWILSSVVRDILVEDELLNLQLKIRKF 501
>SPAC521.02 |||WLM domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 283
Score = 25.0 bits (52), Expect = 6.1
Identities = 11/29 (37%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = -3
Query: 466 WSTKNNVEIQTID-TNRWIIFDTQIDVFL 383
W+ +E+ D +NRW+ F+ +DVFL
Sbjct: 88 WNKGECIELVLRDASNRWLPFEFVMDVFL 116
>SPAC3C7.10 |pex13||peroxin-13|Schizosaccharomyces pombe|chr
1|||Manual
Length = 288
Score = 25.0 bits (52), Expect = 6.1
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = -1
Query: 363 PVAEKLSRLNSYSLTFNPLSRISSALSTSN 274
P+A ++ N Y++ FNP S +S + + N
Sbjct: 38 PLANRIVNPNYYNMGFNPYSGFNSFIPSFN 67
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 25.0 bits (52), Expect = 6.1
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = -1
Query: 327 SLTFNPLSRISSALSTSNSAMDSNLFITTNTKRPYSVS 214
S+ NP S ISS S+S+++ + +TK SVS
Sbjct: 346 SIALNPTSSISSTSSSSSTSSAISTISQDHTKTVTSVS 383
>SPAC31G5.15 |||phosphatidylserine decarboxylase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 980
Score = 24.6 bits (51), Expect = 8.0
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = +2
Query: 272 LFEVLSAEEILERGLKVREYELRRDNFS-ATGNFGFGIQEHIDLGIKYDPSIGIYGLD 442
LFEV + E + KV +++ N S A G+F +Q I+ + DP G+Y +
Sbjct: 336 LFEVGAFESNYDLVFKVVDHDKMSLNDSIAVGSFN--VQSIINSSAQVDPETGLYSFN 391
>SPAC1F5.09c |shk2|pak2|PAK-related kinase Shk2 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 589
Score = 24.6 bits (51), Expect = 8.0
Identities = 18/55 (32%), Positives = 28/55 (50%)
Frame = -1
Query: 426 PIDGSYLIPKSMCSWIPKPKLPVAEKLSRLNSYSLTFNPLSRISSALSTSNSAMD 262
PI YLI K+ + KP L S LNS LT + + R ++A ++S ++
Sbjct: 514 PIRALYLIAKNGTPTLKKPNLVSKNLKSFLNS-CLTIDTIFRATAAELLTHSFLN 567
>SPCC1393.08 |||transcription factor, zf-GATA type
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 557
Score = 24.6 bits (51), Expect = 8.0
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = -3
Query: 463 STKNNVEIQTIDTNRWIIFDT 401
ST+NN ++QT + RW + D+
Sbjct: 92 STENNQKLQTNPSARWSLLDS 112
>SPAC13G6.01c |rad8|SPAC5H10.14c|ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1133
Score = 24.6 bits (51), Expect = 8.0
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -3
Query: 280 LEQCNGQQSFHYDEYQKT 227
LE CN ++S H D+ KT
Sbjct: 371 LEDCNTKESIHIDDILKT 388
>SPCC1322.03 |||TRP-like ion channel|Schizosaccharomyces pombe|chr
3|||Manual
Length = 862
Score = 24.6 bits (51), Expect = 8.0
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = -1
Query: 336 NSYSLTFNPLSRISSALSTSNSAMDSNLFITTNTKRP 226
N S+ P+S S++L A LF+ TN P
Sbjct: 629 NEMSVPLTPVSVCSNSLKKDGEAAPPKLFVQTNCIPP 665
>SPCC1620.12c |||GTPase activating protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 595
Score = 24.6 bits (51), Expect = 8.0
Identities = 21/72 (29%), Positives = 32/72 (44%)
Frame = -1
Query: 468 PGRPRTT*KSKP*IPIDGSYLIPKSMCSWIPKPKLPVAEKLSRLNSYSLTFNPLSRISSA 289
P P T S P P+ + K IP P KL + S N L + +
Sbjct: 144 PSNPNATSSSPP--PLTPILELIKQNNFCIPSP----CRKLVWQSLVSAERNELLTLYAT 197
Query: 288 LSTSNSAMDSNL 253
LST+N+++DS++
Sbjct: 198 LSTTNNSLDSSI 209
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,042,904
Number of Sequences: 5004
Number of extensions: 42196
Number of successful extensions: 139
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 129
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 139
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 188065158
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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