Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0008_K11
         (486 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    24   0.75 
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        23   2.3  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        23   2.3  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        23   2.3  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    23   2.3  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    23   2.3  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    23   2.3  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    22   3.0  

>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 24.2 bits (50), Expect = 0.75
 Identities = 16/58 (27%), Positives = 26/58 (44%), Gaps = 4/58 (6%)
 Frame = +1

Query: 121 NICVGESGDRLTRAAKVLEQL--TGQQPVFSKARYTVR--SFGIRRNEKIAVHCTVRG 282
           N+    SGD    AA    ++  T +  V    R+ V      + RN+ +A+HC  +G
Sbjct: 678 NLAAEHSGDYTCVAANPAAEVRYTAKLQVKVPPRWIVEPTDVSVERNKHVALHCQAQG 735


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = +2

Query: 179 SLPANNLYSQRPDTL 223
           +L A+ LYS+RPD L
Sbjct: 654 TLAASTLYSKRPDLL 668


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = +2

Query: 179 SLPANNLYSQRPDTL 223
           +L A+ LYS+RPD L
Sbjct: 654 TLAASTLYSKRPDLL 668


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = +2

Query: 179 SLPANNLYSQRPDTL 223
           +L A+ LYS+RPD L
Sbjct: 654 TLAASTLYSKRPDLL 668


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = +2

Query: 287 SAEEILERGLKVREYELRRDNFSATGNFGFGIQ 385
           +AEE   +G+    Y + R+  S+T   GF ++
Sbjct: 385 NAEERRVQGVTKPRYMVWRETISSTATLGFRVE 417


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = +2

Query: 287 SAEEILERGLKVREYELRRDNFSATGNFGFGIQ 385
           +AEE   +G+    Y + R+  S+T   GF ++
Sbjct: 300 NAEERRVQGVTKPRYMVWRETISSTATLGFRVE 332


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = +2

Query: 287 SAEEILERGLKVREYELRRDNFSATGNFGFGIQ 385
           +AEE   +G+    Y + R+  S+T   GF ++
Sbjct: 619 NAEERRVQGVTKPRYMVWRETISSTATLGFRVE 651


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = +1

Query: 238 IRRNEKIAVHCTVRG 282
           + RN+ +A+HC  +G
Sbjct: 717 VERNKHVALHCQAQG 731


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,228
Number of Sequences: 438
Number of extensions: 3014
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13297932
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)