Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_K10
(564 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0360 + 22353057-22353691,22354716-22355144,22355233-223553... 174 4e-44
04_04_0141 + 23079516-23079925,23080006-23080084,23080204-230803... 172 1e-43
08_02_0753 - 20805672-20805731,20805825-20805941,20806394-208065... 167 7e-42
03_05_0881 + 28461857-28462263,28462357-28462435,28462798-284629... 164 4e-41
08_02_1026 + 23743186-23743686,23743793-23743915,23744734-237448... 157 8e-39
11_06_0360 - 22699524-22699529,22699865-22699899,22700650-227007... 145 2e-35
11_06_0036 + 19474848-19475188,19475696-19475774,19475880-194760... 138 3e-33
01_01_0767 + 5931031-5931281,5931414-5931594,5932020-5932129,593... 89 3e-18
08_02_1528 + 27666356-27667081 31 0.63
07_03_1647 + 28370226-28370369,28370452-28370611,28370704-283708... 29 1.9
11_01_0419 + 3226224-3226756,3228010-3228169,3228256-3228435,322... 29 2.6
10_07_0052 - 12382975-12383141,12384032-12384458,12385047-12385097 29 3.4
02_05_0699 + 31013176-31013345,31013749-31013872,31013950-310140... 28 4.5
02_01_0167 - 1159231-1159263,1159348-1159419,1159957-1160052,116... 28 4.5
11_06_0284 + 21909758-21913645 28 5.9
08_02_0539 + 18338781-18339592,18347885-18349860,18350030-18350034 27 7.8
04_01_0275 + 3648866-3649951 27 7.8
01_06_0343 + 28566513-28566644,28566791-28568494,28569178-285692... 27 7.8
>02_04_0360 +
22353057-22353691,22354716-22355144,22355233-22355311,
22355472-22355594,22356256-22356372,22356636-22356833
Length = 526
Score = 174 bits (424), Expect = 4e-44
Identities = 89/144 (61%), Positives = 109/144 (75%), Gaps = 4/144 (2%)
Frame = +3
Query: 123 SSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTET--GVELSNEERNLLSVAYKNVVG 296
S + +EE V AKLAEQAERY++M M++V +T EL+ EERNLLSVAYKNV+G
Sbjct: 220 SQPAELSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDSEELTVEERNLLSVAYKNVIG 279
Query: 297 ARRSSWRVISSIEQKTE--GSERKQQMAKEYRVKVEKELREICYDVLCLLDKHLIPKASN 470
ARR+SWR+ISSIEQK E G+E + + KEYR K+E EL +IC +L LLD HL+P ++
Sbjct: 280 ARRASWRIISSIEQKEESRGNEDRCTLIKEYRGKIETELSKICDGILKLLDSHLVPSSTA 339
Query: 471 PESKVFYLKMKGDYYRYLAEVATG 542
PESKVFYLKMKGDYYRYLAE TG
Sbjct: 340 PESKVFYLKMKGDYYRYLAEFKTG 363
>04_04_0141 +
23079516-23079925,23080006-23080084,23080204-23080326,
23081655-23081771,23081886-23081945
Length = 262
Score = 172 bits (419), Expect = 1e-43
Identities = 87/144 (60%), Positives = 110/144 (76%), Gaps = 4/144 (2%)
Frame = +3
Query: 123 SSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTET--GVELSNEERNLLSVAYKNVVG 296
S+ + +EE V AKLAEQAERY++M M++V +T EL+ EERNLLSVAYKNV+G
Sbjct: 2 SAQAELSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDSEELTVEERNLLSVAYKNVIG 61
Query: 297 ARRSSWRVISSIEQKTE--GSERKQQMAKEYRVKVEKELREICYDVLCLLDKHLIPKASN 470
ARR+SWR+ISSIEQK E G+E + + K+YR K+E EL +IC +L LL+ HL+P ++
Sbjct: 62 ARRASWRIISSIEQKEESRGNEDRVTLIKDYRGKIETELTKICDGILKLLESHLVPSSTA 121
Query: 471 PESKVFYLKMKGDYYRYLAEVATG 542
PESKVFYLKMKGDYYRYLAE TG
Sbjct: 122 PESKVFYLKMKGDYYRYLAEFKTG 145
>08_02_0753 -
20805672-20805731,20805825-20805941,20806394-20806516,
20806700-20806778,20806867-20807258
Length = 256
Score = 167 bits (405), Expect = 7e-42
Identities = 85/139 (61%), Positives = 106/139 (76%), Gaps = 4/139 (2%)
Frame = +3
Query: 138 VDKEELVQRAKLAEQAERYDDMAAAMKEVTETG--VELSNEERNLLSVAYKNVVGARRSS 311
+ +EE V AKLAEQAERY++M M++V +T EL+ EERNLLSVAYKNV+GARR+S
Sbjct: 1 MSREENVYMAKLAEQAERYEEMVEYMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRAS 60
Query: 312 WRVISSIEQKTEG--SERKQQMAKEYRVKVEKELREICYDVLCLLDKHLIPKASNPESKV 485
WR++SSIEQK EG +E + KEYR K+E EL +IC +L LLD HL+P ++ ESKV
Sbjct: 61 WRIVSSIEQKEEGRGNEEHVTLIKEYRGKIEAELSKICDGILKLLDSHLVPSSTAAESKV 120
Query: 486 FYLKMKGDYYRYLAEVATG 542
FYLKMKGDY+RYLAE TG
Sbjct: 121 FYLKMKGDYHRYLAEFKTG 139
>03_05_0881 +
28461857-28462263,28462357-28462435,28462798-28462920,
28463632-28463748,28463861-28463917
Length = 260
Score = 164 bits (399), Expect = 4e-41
Identities = 86/143 (60%), Positives = 105/143 (73%), Gaps = 4/143 (2%)
Frame = +3
Query: 126 STMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGV--ELSNEERNLLSVAYKNVVGA 299
S +EE V AKLAEQAERY++M M++V +T EL+ EERNLLSVAYKNV+GA
Sbjct: 2 SPAEASREENVYMAKLAEQAERYEEMVEFMEKVAKTTDVGELTVEERNLLSVAYKNVIGA 61
Query: 300 RRSSWRVISSIEQKTE--GSERKQQMAKEYRVKVEKELREICYDVLCLLDKHLIPKASNP 473
RR+SWR+ISSIEQK E G+E KEYR ++E EL +IC +L LLD HL+P A+
Sbjct: 62 RRASWRIISSIEQKEESRGNEAYVASIKEYRSRIETELSKICDGILKLLDSHLVPSATAA 121
Query: 474 ESKVFYLKMKGDYYRYLAEVATG 542
ESKVFYLKMKGDY+RYLAE +G
Sbjct: 122 ESKVFYLKMKGDYHRYLAEFKSG 144
>08_02_1026 +
23743186-23743686,23743793-23743915,23744734-23744850,
23744948-23745001
Length = 264
Score = 157 bits (380), Expect = 8e-39
Identities = 81/140 (57%), Positives = 102/140 (72%), Gaps = 7/140 (5%)
Frame = +3
Query: 144 KEELVQRAKLAEQAERYDDMAAAMKEVTET-----GVELSNEERNLLSVAYKNVVGARRS 308
+EE+V AKLAEQAERY++M M++V G EL+ EERNLLSVAYKNV+GARR+
Sbjct: 10 REEMVYMAKLAEQAERYEEMVEFMEKVVTAAAAGGGGELTVEERNLLSVAYKNVIGARRA 69
Query: 309 SWRVISSIEQKTEG--SERKQQMAKEYRVKVEKELREICYDVLCLLDKHLIPKASNPESK 482
SWR++SSIEQK EG + A+ YR +VE EL IC +L LLD+ L+P A+ ++K
Sbjct: 70 SWRIVSSIEQKEEGRGAAGHAAAARSYRARVEAELSNICAGILRLLDERLVPAAAAVDAK 129
Query: 483 VFYLKMKGDYYRYLAEVATG 542
VFYLKMKGDY+RYLAE TG
Sbjct: 130 VFYLKMKGDYHRYLAEFKTG 149
>11_06_0360 -
22699524-22699529,22699865-22699899,22700650-22700792,
22701165-22701220,22701367-22701454,22702737-22703037,
22704365-22704428
Length = 230
Score = 145 bits (351), Expect = 2e-35
Identities = 67/134 (50%), Positives = 94/134 (70%)
Frame = +3
Query: 141 DKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRV 320
++E++V+ AKLAEQAERYDDM MK + V++S EER L SV +K +GARR+SWR+
Sbjct: 3 EREKVVRLAKLAEQAERYDDMVEFMKTLARMDVDMSAEERLLFSVGFKKTIGARRASWRI 62
Query: 321 ISSIEQKTEGSERKQQMAKEYRVKVEKELREICYDVLCLLDKHLIPKASNPESKVFYLKM 500
+ S+EQK ++ Y+ KVE ELR +C +VL ++ H +P A++ E+ VF+ KM
Sbjct: 63 LESLEQKVTAGDQPGVTINGYKKKVEDELRAVCNEVLSIIAIHCLPLANSGENVVFFYKM 122
Query: 501 KGDYYRYLAEVATG 542
KGDYYRYLAE +TG
Sbjct: 123 KGDYYRYLAEFSTG 136
>11_06_0036 +
19474848-19475188,19475696-19475774,19475880-19476002,
19476970-19477086,19477169-19477228
Length = 239
Score = 138 bits (334), Expect = 3e-33
Identities = 68/106 (64%), Positives = 79/106 (74%), Gaps = 2/106 (1%)
Frame = +3
Query: 234 GVELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSERKQQMA--KEYRVKVEKEL 407
G EL+ EERNLLSVAYKNV+GARR+SWR+ISSIEQK EG A + YR K+E EL
Sbjct: 18 GEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEEGRGNDAHAATIRSYRGKIEAEL 77
Query: 408 REICYDVLCLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGE 545
IC +L LLD HL+P A ESKVFYLKMKGDY+RYLAE +G+
Sbjct: 78 ARICDGILALLDSHLVPSAGAAESKVFYLKMKGDYHRYLAEFKSGD 123
>01_01_0767 +
5931031-5931281,5931414-5931594,5932020-5932129,
5932212-5932360,5932686-5932738,5933168-5933260
Length = 278
Score = 88.6 bits (210), Expect = 3e-18
Identities = 52/116 (44%), Positives = 69/116 (59%), Gaps = 2/116 (1%)
Frame = +3
Query: 201 MAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRVISSIE--QKTEGSERKQQMA 374
M AM V + L+ EERNLLSV YKN++GA+R++ R+I SIE ++T+G E +
Sbjct: 1 MVEAMNSVAKLDEGLTKEERNLLSVGYKNLIGAKRAAMRIIGSIELKEETKGKESHVRQT 60
Query: 375 KEYRVKVEKELREICYDVLCLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATG 542
EYR KVE E+ +IC DV+ ++DK KGDYYRYLAE TG
Sbjct: 61 AEYRRKVEAEMDKICCDVINIIDK------------------KGDYYRYLAEFKTG 98
>08_02_1528 + 27666356-27667081
Length = 241
Score = 31.1 bits (67), Expect = 0.63
Identities = 22/94 (23%), Positives = 37/94 (39%), Gaps = 1/94 (1%)
Frame = +3
Query: 111 QYLPSSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNV 290
QY T V K+ K A + + + E E + + +LLS K +
Sbjct: 124 QYFIRLTKKVQKQSKKISKKSASAEQEGSRVIKLLAEAREVAISMLESSSHLLS---KKI 180
Query: 291 VGARRSSWRVISSIEQKTE-GSERKQQMAKEYRV 389
+ S W ++S QKT + +Q A E+ +
Sbjct: 181 TTSNSSKWSLVSKAFQKTRLACQEEQLQALEFAI 214
>07_03_1647 +
28370226-28370369,28370452-28370611,28370704-28370831,
28372512-28372628,28372729-28372782,28372985-28373075,
28373517-28373688,28374452-28374573,28374726-28374817,
28375331-28375373,28375596-28375656,28376367-28376515,
28376659-28376729,28376805-28376975,28377056-28377124,
28377427-28377528,28377629-28377697,28378060-28378138,
28378238-28378337,28378438-28378513,28378715-28378894,
28379430-28379552,28379634-28379717,28380068-28380252,
28380339-28380477,28380585-28380644,28380926-28381030,
28381332-28381445
Length = 1019
Score = 29.5 bits (63), Expect = 1.9
Identities = 29/100 (29%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Frame = +3
Query: 249 NEERNLLSVAYKNVVGARRSSW-RVISSIEQKTEGSERKQQMAKEYRVKVEKELREICYD 425
N + LLS AY N+ W + ISS+ Q+ S ++ Y+ + K L +
Sbjct: 291 NTKNALLSSAYVNLCCKESIKWTKHISSLCQRVLLSGPAG--SEIYQESLVKALTKHFGA 348
Query: 426 VLCLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEV-ATG 542
L ++D L+ + +SK KGD RY+ V +TG
Sbjct: 349 KLLIIDPSLLASGQSSKSKESESYKKGDRVRYIGSVQSTG 388
>11_01_0419 +
3226224-3226756,3228010-3228169,3228256-3228435,
3228525-3228659,3229262-3229344,3229442-3229535,
3229649-3229735
Length = 423
Score = 29.1 bits (62), Expect = 2.6
Identities = 16/38 (42%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = +2
Query: 203 GGRDEGSDGNRRRAQQ-RRKKPSFRCL*KCGRRPTVIM 313
G E +DG RRR++Q RR++P R + G RP++ M
Sbjct: 91 GSAAEAADGGRRRSRQGRRRRPQRRR--RRGSRPSLFM 126
>10_07_0052 - 12382975-12383141,12384032-12384458,12385047-12385097
Length = 214
Score = 28.7 bits (61), Expect = 3.4
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -3
Query: 358 LSDPSVFCSIEEMTRHDDRRAPTTFL*ATERR 263
L+D S CSI ++TR D + A T TER+
Sbjct: 154 LADKSTGCSIRKITRSDKKPAKTRSFVETERK 185
>02_05_0699 +
31013176-31013345,31013749-31013872,31013950-31014032,
31014106-31014217,31014297-31014401,31014809-31014859,
31015893-31015979,31016325-31016402,31016477-31016530,
31016608-31016892
Length = 382
Score = 28.3 bits (60), Expect = 4.5
Identities = 23/91 (25%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Frame = +3
Query: 138 VDKEELVQRAKLAEQAERYDDMAAAMKEVTET-GVELSN-----EERNLLSVAYKNVVGA 299
V+ + L +R++L++ Y ++ A E+T E+ +ERN + +Y N
Sbjct: 250 VEAKILAKRSELSKFESEYREVLAKFTEMTSRYAQEMQTIDELLKERNAIHASYTNNTTL 309
Query: 300 RRSSWRVISSIEQKTEGSERKQQMAKEYRVK 392
+RSS K S+ Q + KE + K
Sbjct: 310 QRSSSSNKGKTSSKESKSDDDQTVKKEKKSK 340
>02_01_0167 -
1159231-1159263,1159348-1159419,1159957-1160052,
1160248-1160358,1160768-1160800,1160963-1161076
Length = 152
Score = 28.3 bits (60), Expect = 4.5
Identities = 12/41 (29%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +1
Query: 256 KETFFPLLIKMWSAPDGHH-GESFPLLNRKPKGRKENNRWQ 375
+E PLL+++++ GHH E F + ++PK + W+
Sbjct: 36 REKTCPLLLRVFTKVGGHHQNEEFAVRGKEPKDEVQIYTWK 76
>11_06_0284 + 21909758-21913645
Length = 1295
Score = 27.9 bits (59), Expect = 5.9
Identities = 20/88 (22%), Positives = 41/88 (46%)
Frame = +3
Query: 150 ELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRVISS 329
+L + + E+ + ++ ++E+T+ G E EE+N G + +
Sbjct: 403 KLKRHMEADEKTKEFNKQIGVVEEITKQGGERKEEEKNEGEEENGEEEG-KEKELKGRKD 461
Query: 330 IEQKTEGSERKQQMAKEYRVKVEKELRE 413
E+K +G R+++ +E+ K EKE E
Sbjct: 462 KEKKEKGG-REERKEEEHHEKQEKEKEE 488
>08_02_0539 + 18338781-18339592,18347885-18349860,18350030-18350034
Length = 930
Score = 27.5 bits (58), Expect = 7.8
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 5/40 (12%)
Frame = +3
Query: 402 ELREICYDVLCLLDKHLIPKASNPES-----KVFYLKMKG 506
+LRE+ YD+ LD+ L+ A+ P S K+ K+KG
Sbjct: 71 DLRELSYDMEDSLDRFLVKSAAEPGSCKKLFKILLTKIKG 110
>04_01_0275 + 3648866-3649951
Length = 361
Score = 27.5 bits (58), Expect = 7.8
Identities = 12/45 (26%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = +3
Query: 303 RSSWRVISSIEQKTEGSERKQQMAKEYR--VKVEKELREICYDVL 431
R SW +ISS+ +K E + Y ++V ++R++ +D +
Sbjct: 19 RRSWMLISSLGKKLASEEEWMEYEYHYSRGIRVSPDIRKVLFDCI 63
>01_06_0343 +
28566513-28566644,28566791-28568494,28569178-28569240,
28569241-28569310,28570438-28570715,28571886-28571963,
28573017-28573715,28573811-28573913,28574096-28574196,
28574272-28574446,28574843-28575013,28575534-28575634,
28575706-28575771
Length = 1246
Score = 27.5 bits (58), Expect = 7.8
Identities = 19/84 (22%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
Frame = +3
Query: 174 AEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGAR---RSSWRVISSIEQKT 344
A AE ++ A KE+ +E+ + + A +++V + +SS R I ++++
Sbjct: 129 ARYAEVVQELDQAKKELLRLRLEVRSAAE-AKAKAERDIVASACTIQSSLRAIDEMKRRV 187
Query: 345 EGSERKQQMAKEYRVKVEKELREI 416
+ + + + + R++ E+E REI
Sbjct: 188 DEANEEHVLVELARIEAERERREI 211
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,312,302
Number of Sequences: 37544
Number of extensions: 301252
Number of successful extensions: 937
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 897
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 923
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1293275844
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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