Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_K09
(627 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_01_0103 + 1082077-1082167,1083037-1085477 218 3e-57
02_04_0017 + 18937774-18937864,18938505-18940945 216 1e-56
01_06_0662 + 30987187-30987277,30987825-30990214 216 1e-56
01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912 216 1e-56
06_03_0715 - 23823427-23823525,23823616-23823822,23823907-238240... 133 1e-31
05_05_0156 + 22792783-22793410,22797153-22797227,22797644-227988... 88 6e-18
03_05_0511 + 25056018-25059107 81 7e-16
02_04_0148 - 20198407-20201424 78 7e-15
04_04_0640 - 26891552-26891725,26891814-26892326,26892698-268936... 40 0.001
08_02_1420 + 26942777-26942905,26944415-26944511,26944596-269449... 32 0.32
08_02_0586 - 19024584-19024655,19024745-19024855,19024967-190250... 32 0.43
02_05_0312 - 27792127-27792360,27793282-27793412,27793534-27793837 31 0.99
04_04_1015 - 30115377-30115477,30115570-30115615,30116491-301165... 30 1.3
04_04_1008 - 30054674-30054774,30054867-30054912,30055788-300558... 30 1.3
02_05_0363 - 28297295-28298167 30 1.3
01_06_0930 + 33134385-33138257 30 1.3
12_01_0121 - 920988-921296,921556-921620,921874-921923,922009-92... 29 3.0
05_06_0198 + 26300872-26301519,26302939-26303028,26303118-26303189 29 3.0
04_01_0410 - 5411135-5411581 29 4.0
02_05_0112 - 25931775-25932078,25932554-25932732,25934033-25935184 29 4.0
01_06_0929 + 33091184-33091510,33092503-33092646,33093054-33097001 29 4.0
12_01_0342 + 2634678-2635937 28 7.0
12_01_0334 - 2573375-2574634 28 7.0
07_03_1643 + 28329090-28329125,28329260-28329335,28329413-28330305 28 7.0
06_02_0334 + 14582925-14583404,14583533-14583540,14584070-145845... 28 7.0
04_03_0436 + 15918144-15918377,15918514-15918717,15918813-15918911 28 7.0
05_03_0498 - 14720989-14722119,14722225-14722839 27 9.2
04_03_0439 + 15937934-15938167,15938276-15938476,15938852-159389... 27 9.2
03_05_0060 + 20363857-20365359 27 9.2
02_01_0656 - 4870315-4870975,4872018-4872245,4872874-4872987,487... 27 9.2
>04_01_0103 + 1082077-1082167,1083037-1085477
Length = 843
Score = 218 bits (532), Expect = 3e-57
Identities = 101/163 (61%), Positives = 126/163 (77%), Gaps = 2/163 (1%)
Frame = +1
Query: 145 PVVAQKYRMEMLYEGPHDDEAALGIKTCDPEAPLMMYVSKMVPTSDKGRFYAFGRVFSGK 324
P AQKYR+E LYEGP DD A I+ CDPE PLM+YVSKM+P SDKGRF+AFGRVFSG+
Sbjct: 343 PSKAQKYRVENLYEGPLDDVYATAIRNCDPEGPLMLYVSKMIPASDKGRFFAFGRVFSGR 402
Query: 325 VVTGQKARIMGPNFQPGKKEDLYEKTIQRTILMMGRYVEAIEDVPSGNICGLVGVDQFLV 504
V TG K RIMGPN+ PG+K+DLY K++QRT++ MG+ E++EDVP GN +VG+DQF+
Sbjct: 403 VATGMKVRIMGPNYVPGQKKDLYVKSVQRTVIWMGKKQESVEDVPCGNTVAMVGLDQFIT 462
Query: 505 KTGTITTFKNAH--NMKVMKFSVSPVVRIAVEPKNPADLPKLV 627
K T+T K A ++ MKFSVSPVVR+AV+ K +DLPKLV
Sbjct: 463 KNATLTNEKEADACPIRAMKFSVSPVVRVAVQCKVASDLPKLV 505
Score = 41.1 bits (92), Expect = 7e-04
Identities = 21/46 (45%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Frame = +2
Query: 11 LLKKIGVTLKHEDSDQDGKALLKVVIGSWLRAVKP-TSMMCYPLPS 145
+L+K+GV +K ++ D GKAL+K V+ +WL A MM Y LPS
Sbjct: 297 MLQKLGVVMKADEKDLMGKALMKRVMQTWLPASNALLEMMIYHLPS 342
>02_04_0017 + 18937774-18937864,18938505-18940945
Length = 843
Score = 216 bits (528), Expect = 1e-56
Identities = 100/163 (61%), Positives = 127/163 (77%), Gaps = 2/163 (1%)
Frame = +1
Query: 145 PVVAQKYRMEMLYEGPHDDEAALGIKTCDPEAPLMMYVSKMVPTSDKGRFYAFGRVFSGK 324
P AQ+YR+E LYEGP DD A I+ CDPE PLM+YVSKM+P SDKGRF+AFGRVFSG+
Sbjct: 343 PSKAQRYRVENLYEGPLDDVYATAIRNCDPEGPLMLYVSKMIPASDKGRFFAFGRVFSGR 402
Query: 325 VVTGQKARIMGPNFQPGKKEDLYEKTIQRTILMMGRYVEAIEDVPSGNICGLVGVDQFLV 504
V TG K RIMGPN+ PG+K+DLY K++QRT++ MG+ E++EDVP GN +VG+DQF+
Sbjct: 403 VATGMKVRIMGPNYVPGQKKDLYVKSVQRTVIWMGKKQESVEDVPCGNTVAMVGLDQFIT 462
Query: 505 KTGTITTFK--NAHNMKVMKFSVSPVVRIAVEPKNPADLPKLV 627
K T+T K +A ++ MKFSVSPVVR+AV+ K +DLPKLV
Sbjct: 463 KNATLTNEKESDACPIRAMKFSVSPVVRVAVQCKVASDLPKLV 505
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/46 (43%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Frame = +2
Query: 11 LLKKIGVTLKHEDSDQDGKALLKVVIGSWLRAVKP-TSMMCYPLPS 145
+L+K+GV +K ++ + GKAL+K V+ +WL A MM Y LPS
Sbjct: 297 MLQKLGVVMKADEKELMGKALMKRVMQTWLPASNALLEMMIYHLPS 342
>01_06_0662 + 30987187-30987277,30987825-30990214
Length = 826
Score = 216 bits (528), Expect = 1e-56
Identities = 101/163 (61%), Positives = 125/163 (76%), Gaps = 2/163 (1%)
Frame = +1
Query: 145 PVVAQKYRMEMLYEGPHDDEAALGIKTCDPEAPLMMYVSKMVPTSDKGRFYAFGRVFSGK 324
P AQ+YR+E LYEGP DD A I+ CDPE PLM+YVSKM+P SDKGRFYAFGRVFSG+
Sbjct: 339 PAKAQRYRVENLYEGPLDDIYASAIRNCDPEGPLMLYVSKMIPASDKGRFYAFGRVFSGR 398
Query: 325 VVTGQKARIMGPNFQPGKKEDLYEKTIQRTILMMGRYVEAIEDVPSGNICGLVGVDQFLV 504
V TG K RIMGPN+ PG+K+DLY K +QRT++ MG+ E++E VP GN +VG+DQF+
Sbjct: 399 VATGMKVRIMGPNYAPGQKKDLYVKNVQRTVIWMGKKQESVEGVPCGNTVAMVGLDQFIT 458
Query: 505 KTGTITTFK--NAHNMKVMKFSVSPVVRIAVEPKNPADLPKLV 627
K T+T K +A +K MKFSVSPVVR+AV+ K +DLPKLV
Sbjct: 459 KNATLTNEKEVDACPIKAMKFSVSPVVRVAVQCKVASDLPKLV 501
Score = 36.3 bits (80), Expect = 0.020
Identities = 22/46 (47%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Frame = +2
Query: 11 LLKKIGVTLKHEDSDQDGKALLKVVIGSWLRAVKP-TSMMCYPLPS 145
+L+K+GVT+K D GKAL+K V+ +WL A MM Y LPS
Sbjct: 297 MLQKLGVTMK----DLTGKALMKRVMQTWLPASNALLEMMIYHLPS 338
>01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912
Length = 853
Score = 216 bits (527), Expect = 1e-56
Identities = 99/163 (60%), Positives = 126/163 (77%), Gaps = 2/163 (1%)
Frame = +1
Query: 145 PVVAQKYRMEMLYEGPHDDEAALGIKTCDPEAPLMMYVSKMVPTSDKGRFYAFGRVFSGK 324
P AQ+YR++ LY+GP DD A I+ CDP+ PLM+YVSKM+P SDKGRF+AFGRVFSG
Sbjct: 345 PAKAQQYRVDTLYDGPLDDPYATAIRNCDPKGPLMVYVSKMIPASDKGRFFAFGRVFSGT 404
Query: 325 VVTGQKARIMGPNFQPGKKEDLYEKTIQRTILMMGRYVEAIEDVPSGNICGLVGVDQFLV 504
V TG K RIMGPNF PG+K+DLY KT+QRT++ MG+ E+++DVP GN +VG+DQF+
Sbjct: 405 VATGNKVRIMGPNFVPGEKKDLYVKTVQRTVIWMGKKQESVDDVPCGNTVAMVGLDQFIT 464
Query: 505 KTGTITTFK--NAHNMKVMKFSVSPVVRIAVEPKNPADLPKLV 627
K T+T K +AH +K MKFSVSPVVR +V KN ++LPKLV
Sbjct: 465 KNATLTDEKAVDAHPIKAMKFSVSPVVRKSVACKNASELPKLV 507
Score = 34.3 bits (75), Expect = 0.080
Identities = 18/46 (39%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +2
Query: 11 LLKKIGVTLKHEDSDQDGKALLKVVIGSWLRAVKP-TSMMCYPLPS 145
+L K+ +TLK E+ + GK L+K V+ +WL A M+ + LPS
Sbjct: 299 MLTKLKITLKAEEKELTGKKLMKRVMQAWLPASDALLEMIVFHLPS 344
>06_03_0715 -
23823427-23823525,23823616-23823822,23823907-23824017,
23824124-23824322,23824410-23824495,23824940-23825098,
23825204-23825302,23825385-23826578,23826666-23826734,
23828042-23828812
Length = 997
Score = 133 bits (321), Expect = 1e-31
Identities = 70/180 (38%), Positives = 103/180 (57%), Gaps = 5/180 (2%)
Frame = +1
Query: 103 GGEAYFDDVLSTSIPVV--AQKYRMEMLYEGPHDDEAALGIKTCDPEAPLMMYVSKMVPT 276
G F D+L IP V A ++E +Y GP D +K CDP APLM+ V+K+ P
Sbjct: 449 GTSTGFTDMLVKHIPSVKDAAPRKIEHIYTGPQDSTIVDAMKKCDPHAPLMVNVTKLYPK 508
Query: 277 SDKGRFYAFGRVFSGKVVTGQKARIMGPNFQPGKKEDLYEKTIQRTILMMGRYVEAIEDV 456
SD F AFGRV+SG + TGQ R++G + P +ED+ K + + + RY I
Sbjct: 509 SDCSVFDAFGRVYSGTIQTGQTVRVLGEGYSPDDEEDMTVKEVTKLWVYQARYRVPISKA 568
Query: 457 PSGNICGLVGVDQFLVKTGTITTFK---NAHNMKVMKFSVSPVVRIAVEPKNPADLPKLV 627
P+G+ + GVD ++KT TI K + + + ++F+ PVV+IA EP NP++LPK+V
Sbjct: 569 PAGSWVLIEGVDASIMKTATICPMKMDEDVYIFRPLRFNTLPVVKIAAEPLNPSELPKMV 628
>05_05_0156 +
22792783-22793410,22797153-22797227,22797644-22798879,
22798947-22799155,22799240-22800209,22800395-22800465
Length = 1062
Score = 87.8 bits (208), Expect = 6e-18
Identities = 52/145 (35%), Positives = 82/145 (56%), Gaps = 8/145 (5%)
Frame = +1
Query: 217 IKTCDPEAPLMMYVSKMVPTSDKGRFYAFGRVFSGKVVTGQKARIMGPNFQPGKKEDLYE 396
++ CD E PL++YVSKM KGR++A GRVFSGKV +G + + P++ G+++DLY
Sbjct: 546 VRNCDAEGPLVLYVSKMTLALGKGRYFALGRVFSGKVTSGMNVQFLSPSYGIGERKDLYI 605
Query: 397 KTIQRTILMMGRYVEAIEDVPSGNICGLVGVDQFLVKTGTITTF------KNA--HNMKV 552
K I+ +++ +G E +E G+ C + + L T TT KN+ ++KV
Sbjct: 606 KCIKSSLIWIGDKRELVE----GSSCSSIPGHRDLFDKATYTTVNYQLIKKNSTLTSVKV 661
Query: 553 MKFSVSPVVRIAVEPKNPADLPKLV 627
M +P V + V+ K DLPK +
Sbjct: 662 MPMR-APAVTVRVDCKAYPDLPKFL 685
>03_05_0511 + 25056018-25059107
Length = 1029
Score = 81.0 bits (191), Expect = 7e-16
Identities = 41/116 (35%), Positives = 66/116 (56%), Gaps = 4/116 (3%)
Frame = +1
Query: 292 FYAFGRVFSGKVVTGQKARIMGPNFQPGKKEDLY----EKTIQRTILMMGRYVEAIEDVP 459
F AF RVF G + GQK ++ P + P K E + E +Q M+G+ + + V
Sbjct: 439 FMAFARVFCGVLRAGQKVFVLSPLYDPMKGEAMQKHVQEVELQYLYEMLGQGLRPVSSVC 498
Query: 460 SGNICGLVGVDQFLVKTGTITTFKNAHNMKVMKFSVSPVVRIAVEPKNPADLPKLV 627
+GN+ + G+ ++K+ T+++ KN M F VSP++++A+EP NPADL LV
Sbjct: 499 AGNVVAIQGLGHHILKSATLSSTKNCWPFSSMMFQVSPMLKVAIEPSNPADLGALV 554
>02_04_0148 - 20198407-20201424
Length = 1005
Score = 77.8 bits (183), Expect = 7e-15
Identities = 41/119 (34%), Positives = 65/119 (54%), Gaps = 7/119 (5%)
Frame = +1
Query: 292 FYAFGRVFSGKVVTGQKARIMGPNFQPGKKED-------LYEKTIQRTILMMGRYVEAIE 450
F AF RVFSG + G K ++ P + P + D L E +Q MMG +E +
Sbjct: 416 FLAFARVFSGVLRAGHKVFVLSPMYDPLRGGDDAMQQKHLQEVELQHLYQMMGPDLEIVS 475
Query: 451 DVPSGNICGLVGVDQFLVKTGTITTFKNAHNMKVMKFSVSPVVRIAVEPKNPADLPKLV 627
V +G++ + G+ ++K T+++ KN M F VSP++++A+EP NP+DL LV
Sbjct: 476 AVRAGDVLAIEGLGHHVLKNATLSSTKNCQPFSGMMFQVSPMLKVAIEPSNPSDLGALV 534
>04_04_0640 -
26891552-26891725,26891814-26892326,26892698-26893644,
26893778-26894114,26894413-26894462,26895020-26895248
Length = 749
Score = 40.3 bits (90), Expect = 0.001
Identities = 44/146 (30%), Positives = 64/146 (43%), Gaps = 1/146 (0%)
Frame = +1
Query: 190 PHDDEAALGIKTCDPEAPLMMYVSKMVPTSDKGRFYAFGRVFSGKVVTGQKARIMGPNFQ 369
P D E L K D E P K++ G F R++SGK+V G N
Sbjct: 343 PEDPELILERKPSDDE-PFSGLAFKIMTDPFVGSL-TFVRIYSGKLVAGSYVL----NAN 396
Query: 370 PGKKEDLYEKTIQRTILMMGRYVEAIEDVPSGNICGLVGVDQFLVKTG-TITTFKNAHNM 546
KKE I R + M E I +G+I L G+ + TG T++ +
Sbjct: 397 KDKKE-----RIGRLLEMHANSKEDITVAVAGDIVALAGLKDTI--TGETLSDPDKPVVL 449
Query: 547 KVMKFSVSPVVRIAVEPKNPADLPKL 624
+ M+F PV+++A+EPK AD K+
Sbjct: 450 ERMEFP-DPVIKVAIEPKTKADADKM 474
>08_02_1420 +
26942777-26942905,26944415-26944511,26944596-26944962,
26945286-26945793
Length = 366
Score = 32.3 bits (70), Expect = 0.32
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 6/42 (14%)
Frame = -3
Query: 184 HTTSPYGI------SGRPQGWKWIAHHRSRLHRPQPRTNHNL 77
H+ +P+GI S Q + AHHR +HRP PR N+
Sbjct: 166 HSVAPFGIGLPRYDSSSQQRTRPYAHHRPLVHRPTPRNGSNM 207
>08_02_0586 -
19024584-19024655,19024745-19024855,19024967-19025053,
19025154-19025245,19025456-19025595,19025689-19025867
Length = 226
Score = 31.9 bits (69), Expect = 0.43
Identities = 19/67 (28%), Positives = 35/67 (52%)
Frame = +2
Query: 44 EDSDQDGKALLKVVIGSWLRAVKPTSMMCYPLPSLWSPRNTVWRCCMKALMMMRLPSVSR 223
ED D D + + IG W R+ + Y LP+ +P+ C+K L +++LP +
Sbjct: 128 EDGDGDDEWQIGECIGMWWRSEFDAAPFPYLLPNARAPKE-----CIK-LFLIKLPVSRQ 181
Query: 224 LVIPKHL 244
V+P+++
Sbjct: 182 FVVPRNM 188
>02_05_0312 - 27792127-27792360,27793282-27793412,27793534-27793837
Length = 222
Score = 30.7 bits (66), Expect = 0.99
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = +2
Query: 314 SPVKSLPDRRPVSWAPTSSPARKKICMRRPSSVPSS 421
SPV + P R S P++SPAR + +RRPS++ ++
Sbjct: 11 SPVATAPTARARS-TPSASPARPSLRLRRPSTLAAA 45
>04_04_1015 -
30115377-30115477,30115570-30115615,30116491-30116590,
30116676-30116771,30119519-30119556,30119623-30119733,
30119820-30119951,30120024-30120263,30120532-30120700,
30120994-30121493,30121581-30121691,30121802-30122133,
30122603-30122737,30122839-30122988,30123809-30123947
Length = 799
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/48 (27%), Positives = 27/48 (56%)
Frame = +1
Query: 208 ALGIKTCDPEAPLMMYVSKMVPTSDKGRFYAFGRVFSGKVVTGQKARI 351
+L + + D PL++ + ++ + G+F AFG++ +G + G K I
Sbjct: 468 SLQLPSRDVSKPLILPICDVIKSQSTGQFAAFGKLETGAIRIGSKVLI 515
>04_04_1008 -
30054674-30054774,30054867-30054912,30055788-30055887,
30055973-30056068,30058816-30058853,30058920-30059030,
30059117-30059248,30059321-30059560,30059829-30059997,
30060291-30060790,30060878-30060988,30061099-30061430,
30061900-30062034,30062136-30062285,30063106-30063244
Length = 799
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/48 (27%), Positives = 27/48 (56%)
Frame = +1
Query: 208 ALGIKTCDPEAPLMMYVSKMVPTSDKGRFYAFGRVFSGKVVTGQKARI 351
+L + + D PL++ + ++ + G+F AFG++ +G + G K I
Sbjct: 468 SLQLPSRDVSKPLILPICDVIKSQSTGQFAAFGKLETGAIRIGSKVLI 515
>02_05_0363 - 28297295-28298167
Length = 290
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +2
Query: 353 WAPTSSPARKKICMRRPSSVPSS*WAVTWRPL 448
W P+ SP R+ C RR +S S +AV PL
Sbjct: 206 WQPSPSPMRRTPCRRRQTSTMPSGFAVCLSPL 237
>01_06_0930 + 33134385-33138257
Length = 1290
Score = 30.3 bits (65), Expect = 1.3
Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 6/81 (7%)
Frame = +1
Query: 370 PGKKEDL----YEKTIQRTILMMGRYVEAIEDVPSGNIC--GLVGVDQFLVKTGTITTFK 531
P + EDL Y+ T+ + L+ G Y E +E N C G + + + + T +
Sbjct: 777 PSQLEDLTIEGYKSTMYPSWLLDGSYFENLESFTLANCCVIGSLPPNTEIFRHCMTLTLE 836
Query: 532 NAHNMKVMKFSVSPVVRIAVE 594
N NMK + F + +++E
Sbjct: 837 NVPNMKTLPFLPEGLTSLSIE 857
>12_01_0121 -
920988-921296,921556-921620,921874-921923,922009-922106,
923832-923867,925351-925731,925839-926324,926471-926647
Length = 533
Score = 29.1 bits (62), Expect = 3.0
Identities = 10/36 (27%), Positives = 20/36 (55%)
Frame = +2
Query: 281 TRAVSTRSGACSPVKSLPDRRPVSWAPTSSPARKKI 388
T+ + C+P+KS+ + + W P SS +R+ +
Sbjct: 484 TKGTKSMDHPCNPIKSMGNLGSMGWPPLSSESRRML 519
>05_06_0198 + 26300872-26301519,26302939-26303028,26303118-26303189
Length = 269
Score = 29.1 bits (62), Expect = 3.0
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = +2
Query: 272 RHRTRAVSTRSGACSPVKSLPDRRPVSWAPTS 367
RHR R V T S + S + P P W P S
Sbjct: 29 RHRRRRVQTLSSSSSDAAAAPSTPPPVWPPAS 60
>04_01_0410 - 5411135-5411581
Length = 148
Score = 28.7 bits (61), Expect = 4.0
Identities = 10/37 (27%), Positives = 20/37 (54%)
Frame = +2
Query: 299 RSGACSPVKSLPDRRPVSWAPTSSPARKKICMRRPSS 409
R+ SP+ + +P P+S+ KK+C ++P +
Sbjct: 98 RTSVKSPIPAKKSEQPAQKKPSSAQKSKKVCRKKPKT 134
>02_05_0112 - 25931775-25932078,25932554-25932732,25934033-25935184
Length = 544
Score = 28.7 bits (61), Expect = 4.0
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +2
Query: 308 ACSPVKSLPDRRPVSWAPTSSP 373
A S + P RRP SWAP+ +P
Sbjct: 255 AASSAPAFPPRRPNSWAPSPAP 276
>01_06_0929 + 33091184-33091510,33092503-33092646,33093054-33097001
Length = 1472
Score = 28.7 bits (61), Expect = 4.0
Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 6/70 (8%)
Frame = +1
Query: 370 PGKKEDL----YEKTIQRTILMMGRYVEAIEDVPSGNICGLVGV--DQFLVKTGTITTFK 531
P + EDL Y+ + + L+ G Y E +E N CG+ + + + + T +
Sbjct: 959 PSQLEDLTIEGYKSAMYPSWLLDGSYFENLESFTLANCCGIGSLPPNTEIFRHCLTLTLE 1018
Query: 532 NAHNMKVMKF 561
N NMK + F
Sbjct: 1019 NVPNMKTLSF 1028
>12_01_0342 + 2634678-2635937
Length = 419
Score = 27.9 bits (59), Expect = 7.0
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -3
Query: 163 ISGRPQGWKWIAHHRSRLHRPQPRTNHNL 77
I G GW A HRS LH P T L
Sbjct: 98 IVGSSHGWLVTADHRSELHLLNPATGEQL 126
>12_01_0334 - 2573375-2574634
Length = 419
Score = 27.9 bits (59), Expect = 7.0
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -3
Query: 163 ISGRPQGWKWIAHHRSRLHRPQPRTNHNL 77
I G GW A HRS LH P T L
Sbjct: 98 IVGSSHGWLVTADHRSELHLLNPATGEQL 126
>07_03_1643 + 28329090-28329125,28329260-28329335,28329413-28330305
Length = 334
Score = 27.9 bits (59), Expect = 7.0
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = -1
Query: 114 GFTARSHEPITTFSKALPSWSESSCLSVTPIFFSKPS 4
GF S +P+ +++ A PS S SS + TP+ +P+
Sbjct: 239 GFPYYSPQPVMSYNVAHPSASVSSYYAPTPVMSMQPT 275
>06_02_0334 +
14582925-14583404,14583533-14583540,14584070-14584561,
14584733-14585087,14585338-14585505
Length = 500
Score = 27.9 bits (59), Expect = 7.0
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +2
Query: 299 RSGACSPVKSLPDRRPVSWAPTSSPARKKI-CMRRPS 406
R+ SP+ + +P P+S+P KK+ CMRR S
Sbjct: 132 RTPVKSPIPAKKSEQPALKKPSSAPKSKKVNCMRRLS 168
>04_03_0436 + 15918144-15918377,15918514-15918717,15918813-15918911
Length = 178
Score = 27.9 bits (59), Expect = 7.0
Identities = 19/53 (35%), Positives = 25/53 (47%)
Frame = -1
Query: 372 GLEVGAHDTGLLSGNDFTGEHAPERVETALVRCRYHFAHVHHERCFGITSLDT 214
GLEV A G + + F H P + E +V A +HH G+T LDT
Sbjct: 20 GLEVSAQGLGCMGMSAF---HGPSKPEADMV------ALIHHAVAAGVTLLDT 63
>05_03_0498 - 14720989-14722119,14722225-14722839
Length = 581
Score = 27.5 bits (58), Expect = 9.2
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = -1
Query: 504 DEELIDADQTANVTGGHILNGLHVTAHHEDGTLDG 400
D L+DAD T N G ++N GT+DG
Sbjct: 504 DASLVDADGTVNEAGQRLVNLRREWTSDARGTIDG 538
>04_03_0439 +
15937934-15938167,15938276-15938476,15938852-15938911,
15939896-15939958,15940822-15940848,15941020-15941358
Length = 307
Score = 27.5 bits (58), Expect = 9.2
Identities = 19/53 (35%), Positives = 23/53 (43%)
Frame = -1
Query: 372 GLEVGAHDTGLLSGNDFTGEHAPERVETALVRCRYHFAHVHHERCFGITSLDT 214
GLEV A G + + F G PE AL+ HH G+T LDT
Sbjct: 20 GLEVSAQGLGCMGMSAFYGPPKPEADMVALI---------HHAVAAGVTHLDT 63
>03_05_0060 + 20363857-20365359
Length = 500
Score = 27.5 bits (58), Expect = 9.2
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -1
Query: 477 TANVTGGHILNGLHVTAHHEDGTLDGLL 394
+AN TG ++G+H HH G ++G L
Sbjct: 240 SANQTGNSFVDGIHGENHHSIGEVNGNL 267
>02_01_0656 -
4870315-4870975,4872018-4872245,4872874-4872987,
4873813-4873901
Length = 363
Score = 27.5 bits (58), Expect = 9.2
Identities = 24/76 (31%), Positives = 31/76 (40%), Gaps = 10/76 (13%)
Frame = -1
Query: 618 GQVGGILGLNGYTHDG-RHAKLHNLHVMCVL-------EGSDGTSLDEELIDADQTANVT 463
G GG+LGL G H G + AK HV + E D D L+ +D A
Sbjct: 181 GLRGGVLGLGGVGHMGVKVAKSMGHHVTVISSSARKRGEAMDDLGADAYLVSSDAAAMAA 240
Query: 462 GGHILNGL--HVTAHH 421
G L+ + V HH
Sbjct: 241 AGDSLDYIIDTVPVHH 256
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,055,876
Number of Sequences: 37544
Number of extensions: 480927
Number of successful extensions: 1534
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1462
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1527
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1525730988
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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