Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_K08
(471 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X13382-1|CAA31759.1| 407|Drosophila melanogaster protein ( Dros... 192 2e-49
BT025959-1|ABG02203.1| 233|Drosophila melanogaster IP15855p pro... 192 2e-49
AY069485-1|AAL39630.1| 401|Drosophila melanogaster LD21756p pro... 192 2e-49
AE014297-4196|AAG22173.1| 401|Drosophila melanogaster CG5502-PA... 192 2e-49
X06881-1|CAA29998.1| 123|Drosophila melanogaster protein ( Dros... 173 1e-43
AY071142-1|AAL48764.1| 572|Drosophila melanogaster RE17942p pro... 30 1.8
AF223064-1|AAF34687.1| 571|Drosophila melanogaster putative mic... 30 1.8
AE014297-195|AAF52059.2| 572|Drosophila melanogaster CG10229-PA... 30 1.8
BT025138-1|ABE73309.1| 175|Drosophila melanogaster IP06825p pro... 29 4.2
AY071124-1|AAL48746.1| 420|Drosophila melanogaster RE17165p pro... 29 4.2
AE014296-854|AAF47906.1| 172|Drosophila melanogaster CG15023-PA... 29 4.2
AE014296-850|AAF47902.2| 420|Drosophila melanogaster CG15021-PA... 29 4.2
AF239608-1|AAF63500.1| 1551|Drosophila melanogaster SP1070 protein. 28 5.5
AE014134-1211|AAF52472.1| 3396|Drosophila melanogaster CG9138-PA... 28 5.5
AE014134-668|AAF51067.1| 1131|Drosophila melanogaster CG10019-PA... 28 5.5
L08845-1|AAB08527.1| 2412|Drosophila melanogaster disabled protein. 28 7.3
AE014296-2787|AAF49424.2| 2224|Drosophila melanogaster CG9695-PA... 28 7.3
>X13382-1|CAA31759.1| 407|Drosophila melanogaster protein (
Drosophila melanogastermRNA for put. ribosomal protein
L1. ).
Length = 407
Score = 192 bits (468), Expect = 2e-49
Identities = 87/134 (64%), Positives = 101/134 (75%)
Frame = +3
Query: 9 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXX 188
HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 63 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNVNQ 122
Query: 189 XXXXXXXXXXXXXXXXXXQARGHIVEKIPELPLVVSDKVQEINKTKQAVIFLRRIKAWSD 368
Q++GH+++ + E PLVVSD+VQ++ KTKQAVIFLRR+K W+D
Sbjct: 123 RRYALVSAIAASGVPALVQSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWAD 182
Query: 369 VLKVYKSQRLRAGK 410
+ KVYKSQR RAG+
Sbjct: 183 IQKVYKSQRFRAGR 196
Score = 32.7 bits (71), Expect = 0.26
Identities = 11/18 (61%), Positives = 17/18 (94%)
Frame = +1
Query: 418 MRNRRRVQRKGPLIIYNK 471
MR+RRR+ R+GPL++Y+K
Sbjct: 199 MRDRRRIARRGPLVVYDK 216
>BT025959-1|ABG02203.1| 233|Drosophila melanogaster IP15855p
protein.
Length = 233
Score = 192 bits (468), Expect = 2e-49
Identities = 87/134 (64%), Positives = 101/134 (75%)
Frame = +3
Query: 9 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXX 188
HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 63 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNVNQ 122
Query: 189 XXXXXXXXXXXXXXXXXXQARGHIVEKIPELPLVVSDKVQEINKTKQAVIFLRRIKAWSD 368
Q++GH+++ + E PLVVSD+VQ++ KTKQAVIFLRR+K W+D
Sbjct: 123 RRYALVSAIAASGVPALVQSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWAD 182
Query: 369 VLKVYKSQRLRAGK 410
+ KVYKSQR RAG+
Sbjct: 183 IQKVYKSQRFRAGR 196
Score = 32.7 bits (71), Expect = 0.26
Identities = 11/18 (61%), Positives = 17/18 (94%)
Frame = +1
Query: 418 MRNRRRVQRKGPLIIYNK 471
MR+RRR+ R+GPL++Y+K
Sbjct: 199 MRDRRRIARRGPLVVYDK 216
>AY069485-1|AAL39630.1| 401|Drosophila melanogaster LD21756p
protein.
Length = 401
Score = 192 bits (468), Expect = 2e-49
Identities = 87/134 (64%), Positives = 101/134 (75%)
Frame = +3
Query: 9 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXX 188
HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 63 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNVNQ 122
Query: 189 XXXXXXXXXXXXXXXXXXQARGHIVEKIPELPLVVSDKVQEINKTKQAVIFLRRIKAWSD 368
Q++GH+++ + E PLVVSD+VQ++ KTKQAVIFLRR+K W+D
Sbjct: 123 RRYALVSAIAASGVPALVQSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWAD 182
Query: 369 VLKVYKSQRLRAGK 410
+ KVYKSQR RAG+
Sbjct: 183 IQKVYKSQRFRAGR 196
Score = 32.7 bits (71), Expect = 0.26
Identities = 11/18 (61%), Positives = 17/18 (94%)
Frame = +1
Query: 418 MRNRRRVQRKGPLIIYNK 471
MR+RRR+ R+GPL++Y+K
Sbjct: 199 MRDRRRIARRGPLVVYDK 216
>AE014297-4196|AAG22173.1| 401|Drosophila melanogaster CG5502-PA
protein.
Length = 401
Score = 192 bits (468), Expect = 2e-49
Identities = 87/134 (64%), Positives = 101/134 (75%)
Frame = +3
Query: 9 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXX 188
HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 63 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNVNQ 122
Query: 189 XXXXXXXXXXXXXXXXXXQARGHIVEKIPELPLVVSDKVQEINKTKQAVIFLRRIKAWSD 368
Q++GH+++ + E PLVVSD+VQ++ KTKQAVIFLRR+K W+D
Sbjct: 123 RRYALVSAIAASGVPALVQSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWAD 182
Query: 369 VLKVYKSQRLRAGK 410
+ KVYKSQR RAG+
Sbjct: 183 IQKVYKSQRFRAGR 196
Score = 32.7 bits (71), Expect = 0.26
Identities = 11/18 (61%), Positives = 17/18 (94%)
Frame = +1
Query: 418 MRNRRRVQRKGPLIIYNK 471
MR+RRR+ R+GPL++Y+K
Sbjct: 199 MRDRRRIARRGPLVVYDK 216
>X06881-1|CAA29998.1| 123|Drosophila melanogaster protein (
Drosophila gene forribosomal protein L1 fragment. ).
Length = 123
Score = 173 bits (421), Expect = 1e-43
Identities = 78/123 (63%), Positives = 91/123 (73%)
Frame = +3
Query: 9 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXX 188
HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 1 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRRVNVNQ 60
Query: 189 XXXXXXXXXXXXXXXXXXQARGHIVEKIPELPLVVSDKVQEINKTKQAVIFLRRIKAWSD 368
Q++GH+++ + E PLVVSD+VQ++ KTKQAVIFLRR+K W+D
Sbjct: 61 RRYALVSAIAASGVPALVQSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWAD 120
Query: 369 VLK 377
+ K
Sbjct: 121 IQK 123
>AY071142-1|AAL48764.1| 572|Drosophila melanogaster RE17942p
protein.
Length = 572
Score = 29.9 bits (64), Expect = 1.8
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = -3
Query: 100 PCPDLWVPPPRTRGIRATARPVPQDSAL 17
P PD+W PPP+ + +P P A+
Sbjct: 133 PDPDIWTPPPKDPDVWGPPKPPPTTQAV 160
>AF223064-1|AAF34687.1| 571|Drosophila melanogaster putative
microtubule severingprotein katanin p60 subunit protein.
Length = 571
Score = 29.9 bits (64), Expect = 1.8
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = -3
Query: 100 PCPDLWVPPPRTRGIRATARPVPQDSAL 17
P PD+W PPP+ + +P P A+
Sbjct: 133 PDPDIWTPPPKDPDVWGPPKPPPTTQAV 160
>AE014297-195|AAF52059.2| 572|Drosophila melanogaster CG10229-PA
protein.
Length = 572
Score = 29.9 bits (64), Expect = 1.8
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = -3
Query: 100 PCPDLWVPPPRTRGIRATARPVPQDSAL 17
P PD+W PPP+ + +P P A+
Sbjct: 133 PDPDIWTPPPKDPDVWGPPKPPPTTQAV 160
>BT025138-1|ABE73309.1| 175|Drosophila melanogaster IP06825p
protein.
Length = 175
Score = 28.7 bits (61), Expect = 4.2
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = -3
Query: 127 PPRHMLPNAPCPDLWVPPPRTRGIRATARPVP 32
PP LP P P PPP T T P P
Sbjct: 62 PPPTYLPPKPVPTYLPPPPPTTTTTTTTTPAP 93
>AY071124-1|AAL48746.1| 420|Drosophila melanogaster RE17165p
protein.
Length = 420
Score = 28.7 bits (61), Expect = 4.2
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = -3
Query: 130 RPPRHMLPNAPCPDLWVPPPRTRGIRATARPVPQDSA 20
RPP P+AP P PP+T R +P P A
Sbjct: 128 RPPPQPTPSAPAPPPSYGPPQTPPPRPPPQPTPSAPA 164
Score = 27.5 bits (58), Expect = 9.7
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = -3
Query: 130 RPPRHMLPNAPCPDLWVPPPRTRGIRATARPVPQ 29
RPP P+AP P P P+ + + P PQ
Sbjct: 153 RPPPQPTPSAPAPSYGPPQPQPPAPQPPSPPSPQ 186
>AE014296-854|AAF47906.1| 172|Drosophila melanogaster CG15023-PA
protein.
Length = 172
Score = 28.7 bits (61), Expect = 4.2
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = -3
Query: 127 PPRHMLPNAPCPDLWVPPPRTRGIRATARPVP 32
PP LP P P PPP T T P P
Sbjct: 59 PPPTYLPPKPVPTYLPPPPPTTTTTTTTTPAP 90
>AE014296-850|AAF47902.2| 420|Drosophila melanogaster CG15021-PA
protein.
Length = 420
Score = 28.7 bits (61), Expect = 4.2
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = -3
Query: 130 RPPRHMLPNAPCPDLWVPPPRTRGIRATARPVPQDSA 20
RPP P+AP P PP+T R +P P A
Sbjct: 128 RPPPQPTPSAPAPPPSYGPPQTPPPRPPPQPTPSAPA 164
Score = 27.5 bits (58), Expect = 9.7
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = -3
Query: 130 RPPRHMLPNAPCPDLWVPPPRTRGIRATARPVPQ 29
RPP P+AP P P P+ + + P PQ
Sbjct: 153 RPPPQPTPSAPAPSYGPPQPQPPAPQPPSPPSPQ 186
>AF239608-1|AAF63500.1| 1551|Drosophila melanogaster SP1070 protein.
Length = 1551
Score = 28.3 bits (60), Expect = 5.5
Identities = 18/44 (40%), Positives = 21/44 (47%)
Frame = -2
Query: 224 GRCHGGGHGSTSLP*VHATVPAPPRLGRREHTSAAAHVTECTLP 93
GRC G+ L V + A P LGR A+ V ECTLP
Sbjct: 1230 GRCEPCPRGTYRLQGVQPSCAACP-LGRTTPKVGASSVEECTLP 1272
>AE014134-1211|AAF52472.1| 3396|Drosophila melanogaster CG9138-PA
protein.
Length = 3396
Score = 28.3 bits (60), Expect = 5.5
Identities = 18/44 (40%), Positives = 21/44 (47%)
Frame = -2
Query: 224 GRCHGGGHGSTSLP*VHATVPAPPRLGRREHTSAAAHVTECTLP 93
GRC G+ L V + A P LGR A+ V ECTLP
Sbjct: 3071 GRCEPCPRGTYRLQGVQPSCAACP-LGRTTPKVGASSVEECTLP 3113
>AE014134-668|AAF51067.1| 1131|Drosophila melanogaster CG10019-PA
protein.
Length = 1131
Score = 28.3 bits (60), Expect = 5.5
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -2
Query: 218 CHGGGHGSTSLP*VHATVPAPPRLGRREH 132
CHGG T+LP +T P PR + H
Sbjct: 174 CHGGVGTQTTLPQTTSTPPTLPRFPSKRH 202
>L08845-1|AAB08527.1| 2412|Drosophila melanogaster disabled protein.
Length = 2412
Score = 27.9 bits (59), Expect = 7.3
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = +1
Query: 136 SRRPSRGGAGTVA*TYGRDVLPWPPPWQRPGYRPS 240
S PSRG G + DV P P Q+PG PS
Sbjct: 1409 SAAPSRGAPGLHTPSQFNDVSTSPIPLQKPGMGPS 1443
>AE014296-2787|AAF49424.2| 2224|Drosophila melanogaster CG9695-PA
protein.
Length = 2224
Score = 27.9 bits (59), Expect = 7.3
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = +1
Query: 136 SRRPSRGGAGTVA*TYGRDVLPWPPPWQRPGYRPS 240
S PSRG G + DV P P Q+PG PS
Sbjct: 1349 SAAPSRGAPGLHTPSQFNDVSTSPIPLQKPGMGPS 1383
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,755,408
Number of Sequences: 53049
Number of extensions: 434718
Number of successful extensions: 2072
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1941
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2066
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1601407269
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -