Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0008_K08
         (471 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    22   3.8  
DQ325067-1|ABD14081.1|  152|Apis mellifera complementary sex det...    21   6.7  
DQ325066-1|ABD14080.1|  152|Apis mellifera complementary sex det...    21   6.7  
DQ325065-1|ABD14079.1|  152|Apis mellifera complementary sex det...    21   6.7  
DQ325064-1|ABD14078.1|  152|Apis mellifera complementary sex det...    21   6.7  
DQ325063-1|ABD14077.1|  152|Apis mellifera complementary sex det...    21   6.7  
DQ325062-1|ABD14076.1|  152|Apis mellifera complementary sex det...    21   6.7  
DQ325061-1|ABD14075.1|  152|Apis mellifera complementary sex det...    21   6.7  
AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.          21   6.7  
AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.          21   6.7  
AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.          21   6.7  
AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.          21   6.7  
AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.          21   6.7  
AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.          21   6.7  
AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.          21   6.7  
AY352276-1|AAQ67417.1|  385|Apis mellifera complementary sex det...    21   6.7  
AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex det...    21   6.7  
DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate r...    21   8.8  
AB006152-1|BAA24504.1|  178|Apis mellifera inositol 1,4,5-tripho...    21   8.8  

>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +3

Query: 93  GQGAFGNMCRGGRMFAP 143
           G G FG++CRG     P
Sbjct: 640 GGGEFGDVCRGKLKLPP 656



 Score = 20.6 bits (41), Expect = 8.8
 Identities = 5/10 (50%), Positives = 7/10 (70%)
 Frame = +1

Query: 205 PPPWQRPGYR 234
           PPPW+   Y+
Sbjct: 125 PPPWETDSYK 134


>DQ325067-1|ABD14081.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -3

Query: 121 RHMLPNAPCPDLWVPPPRTR 62
           RH+ P  P P  ++PP   R
Sbjct: 120 RHIGPLTPFPPRFIPPDMYR 139


>DQ325066-1|ABD14080.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -3

Query: 121 RHMLPNAPCPDLWVPPPRTR 62
           RH+ P  P P  ++PP   R
Sbjct: 120 RHIGPLTPFPPRFIPPDMYR 139


>DQ325065-1|ABD14079.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -3

Query: 121 RHMLPNAPCPDLWVPPPRTR 62
           RH+ P  P P  ++PP   R
Sbjct: 120 RHIGPLTPFPPRFIPPDMYR 139


>DQ325064-1|ABD14078.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -3

Query: 121 RHMLPNAPCPDLWVPPPRTR 62
           RH+ P  P P  ++PP   R
Sbjct: 120 RHIGPLTPFPPRFIPPDMYR 139


>DQ325063-1|ABD14077.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -3

Query: 121 RHMLPNAPCPDLWVPPPRTR 62
           RH+ P  P P  ++PP   R
Sbjct: 120 RHIGPLTPFPPRFIPPDMYR 139


>DQ325062-1|ABD14076.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -3

Query: 121 RHMLPNAPCPDLWVPPPRTR 62
           RH+ P  P P  ++PP   R
Sbjct: 120 RHIGPLTPFPPRFIPPDMYR 139


>DQ325061-1|ABD14075.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -3

Query: 121 RHMLPNAPCPDLWVPPPRTR 62
           RH+ P  P P  ++PP   R
Sbjct: 120 RHIGPLTPFPPRFIPPDMYR 139


>AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -3

Query: 121 RHMLPNAPCPDLWVPPPRTR 62
           RH+ P  P P  ++PP   R
Sbjct: 369 RHIGPLTPFPPRFIPPDMYR 388


>AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -3

Query: 121 RHMLPNAPCPDLWVPPPRTR 62
           RH+ P  P P  ++PP   R
Sbjct: 369 RHIGPLTPFPPRFIPPDMYR 388


>AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -3

Query: 121 RHMLPNAPCPDLWVPPPRTR 62
           RH+ P  P P  ++PP   R
Sbjct: 369 RHIGPLTPFPPRFIPPDMYR 388


>AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -3

Query: 121 RHMLPNAPCPDLWVPPPRTR 62
           RH+ P  P P  ++PP   R
Sbjct: 369 RHIGPLTPFPPRFIPPDMYR 388


>AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -3

Query: 121 RHMLPNAPCPDLWVPPPRTR 62
           RH+ P  P P  ++PP   R
Sbjct: 369 RHIGPLTPFPPRFIPPDMYR 388


>AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -3

Query: 121 RHMLPNAPCPDLWVPPPRTR 62
           RH+ P  P P  ++PP   R
Sbjct: 369 RHIGPLTPFPPRFIPPDMYR 388


>AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.
          Length = 400

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -3

Query: 121 RHMLPNAPCPDLWVPPPRTR 62
           RH+ P  P P  ++PP   R
Sbjct: 368 RHIGPLTPFPPRFIPPDMYR 387


>AY352276-1|AAQ67417.1|  385|Apis mellifera complementary sex
           determiner protein.
          Length = 385

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -3

Query: 121 RHMLPNAPCPDLWVPPPRTR 62
           RH+ P  P P  ++PP   R
Sbjct: 353 RHIGPLTPFPPRFIPPDMYR 372


>AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -3

Query: 121 RHMLPNAPCPDLWVPPPRTR 62
           RH+ P  P P  ++PP   R
Sbjct: 369 RHIGPLTPFPPRFIPPDMYR 388


>DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate
           receptor protein.
          Length = 322

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 13/48 (27%), Positives = 24/48 (50%)
 Frame = +3

Query: 249 RGHIVEKIPELPLVVSDKVQEINKTKQAVIFLRRIKAWSDVLKVYKSQ 392
           R  +++   ++ L+VSD   E  K  ++ + + R       L VYKS+
Sbjct: 157 RQEVLQAFKQVQLLVSDSDVESYKQIKSDLDVLRQSVEKSELWVYKSK 204


>AB006152-1|BAA24504.1|  178|Apis mellifera inositol
           1,4,5-triphosphate recepter protein.
          Length = 178

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 13/48 (27%), Positives = 24/48 (50%)
 Frame = +3

Query: 249 RGHIVEKIPELPLVVSDKVQEINKTKQAVIFLRRIKAWSDVLKVYKSQ 392
           R  +++   ++ L+VSD   E  K  ++ + + R       L VYKS+
Sbjct: 125 RQEVLQAFKQVQLLVSDSDVESYKQIKSDLDVLRQSVEKSELWVYKSK 172


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,685
Number of Sequences: 438
Number of extensions: 2373
Number of successful extensions: 20
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12682287
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)