Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_K04
(665 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132902-1|CAB81996.1| 246|Caenorhabditis elegans Hypothetical ... 227 4e-60
L15313-8|AAA28196.1| 469|Caenorhabditis elegans Hypothetical pr... 35 0.045
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 33 0.24
Z46792-1|CAA86764.1| 266|Caenorhabditis elegans Hypothetical pr... 31 0.56
L23648-7|AAA28031.2| 962|Caenorhabditis elegans Abnormal cell l... 31 0.97
AF104917-1|AAD22772.1| 962|Caenorhabditis elegans LIN-36 protein. 31 0.97
Z46267-15|CAI79255.1| 1100|Caenorhabditis elegans Hypothetical p... 30 1.7
Z46267-14|CAI79254.1| 1030|Caenorhabditis elegans Hypothetical p... 30 1.7
Z46267-13|CAH04746.1| 845|Caenorhabditis elegans Hypothetical p... 30 1.7
Z46267-12|CAD45595.2| 528|Caenorhabditis elegans Hypothetical p... 30 1.7
Z46267-11|CAA86426.1| 611|Caenorhabditis elegans Hypothetical p... 30 1.7
Z46267-10|CAA86425.1| 581|Caenorhabditis elegans Hypothetical p... 30 1.7
Z46267-9|CAA86427.2| 889|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z46267-8|CAA86424.2| 1030|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z46267-7|CAA86429.2| 947|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z46267-6|CAA86428.2| 1215|Caenorhabditis elegans Hypothetical pr... 30 1.7
U00058-2|AAL02528.2| 832|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 29 3.9
U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z77652-11|CAI70405.1| 310|Caenorhabditis elegans Hypothetical p... 28 6.8
Z32683-4|CAA83629.1| 443|Caenorhabditis elegans Hypothetical pr... 28 6.8
U41992-7|AAA83358.1| 374|Caenorhabditis elegans Hypothetical pr... 28 6.8
U23139-6|AAK31489.2| 520|Caenorhabditis elegans Hypothetical pr... 28 6.8
AF098989-2|AAK18954.3| 346|Caenorhabditis elegans Hypothetical ... 28 6.8
Z81541-1|CAB04411.1| 1291|Caenorhabditis elegans Hypothetical pr... 27 9.1
Z71266-12|CAA95848.1| 1938|Caenorhabditis elegans Hypothetical p... 27 9.1
Z71261-8|CAA95806.1| 1938|Caenorhabditis elegans Hypothetical pr... 27 9.1
X08065-1|CAA30854.1| 1938|Caenorhabditis elegans myosin 1 protein. 27 9.1
AF003139-10|AAB54160.3| 294|Caenorhabditis elegans Hypothetical... 27 9.1
>AL132902-1|CAB81996.1| 246|Caenorhabditis elegans Hypothetical
protein Y71A12B.1 protein.
Length = 246
Score = 227 bits (556), Expect = 4e-60
Identities = 116/191 (60%), Positives = 140/191 (73%)
Frame = +2
Query: 11 EVDADLLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKR 190
EV D LGDEWKGYV+R+ GGNDKQGFPMKQG+LTN RVRLL+ KG SCYR R++GERKR
Sbjct: 35 EVAIDALGDEWKGYVVRIGGGNDKQGFPMKQGILTNGRVRLLLKKGQSCYRERKNGERKR 94
Query: 191 KSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGEVPRRLGPKRASKIRKLFNLKKEDDVR 370
KSVRGCIVDAN+S L+LVIV+KG EI GLTD +PR+LGPKRASKIRKLFNL K DDV
Sbjct: 95 KSVRGCIVDANMSALSLVIVKKGDGEIEGLTDSVLPRKLGPKRASKIRKLFNLTKHDDVT 154
Query: 371 RYVVKRLLPAKEGKENAKPRYKAPKIQRLVTPVVLQRRTSIALSPSQKKRLAKRKSAEAD 550
+YV+ +G + APKIQRL+TP + R+ + L + +++ R A A
Sbjct: 155 KYVITHDKTFPDG----VTKTIAPKIQRLITPARIARKKYL-LRQKRNQKIKMRDDAAA- 208
Query: 551 YAKLLAQRKKE 583
Y KLLA+ KE
Sbjct: 209 YHKLLAKYSKE 219
>L15313-8|AAA28196.1| 469|Caenorhabditis elegans Hypothetical
protein ZK353.8 protein.
Length = 469
Score = 35.1 bits (77), Expect = 0.045
Identities = 29/118 (24%), Positives = 56/118 (47%), Gaps = 5/118 (4%)
Frame = +2
Query: 266 EIPGLTDGEVPRRL---GPKRASKIRKLFNLKKEDDVRRYVVKRLLPAKEGKENAKPRYK 436
++P TD +P P ++S + + + V R K LL K+ K+ K R
Sbjct: 137 QVPASTDAPIPAPTPVTAPIQSSSTSQEMTRELAEKVAR--AKALLEQKKQKDAEKKREA 194
Query: 437 APKIQRLVTPV--VLQRRTSIALSPSQKKRLAKRKSAEADYAKLLAQRKKESKVRRQE 604
++ +T Q R + AL + K+R ++ +AE+D ++LAQ K + + +++
Sbjct: 195 DKHVKEEMTKAREAKQERDAEALVKAAKQRKMEKLAAESDKKRILAQIKADREAAQKK 252
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 32.7 bits (71), Expect = 0.24
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Frame = +2
Query: 356 EDDVRRYVVKRLLPAK-EGKENAKPRYKAPKIQRLVTPVVLQRRTSIALSPSQKK-RLAK 529
E + ++ + K+ P K E E + K + +RL L+R+ +A + QKK RLAK
Sbjct: 42 EVETKKGMKKKNKPKKVENTERPEEDAKCVEERRLAKK--LRRKEQMAANRKQKKERLAK 99
Query: 530 RKSAEADYAKLLAQRKKESKVRRQEEIK 613
RK EA+ + ++ E+ + +E K
Sbjct: 100 RKQKEAESSAKKSENATETTTEKPKEQK 127
>Z46792-1|CAA86764.1| 266|Caenorhabditis elegans Hypothetical
protein C52A11.2 protein.
Length = 266
Score = 31.5 bits (68), Expect = 0.56
Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 8/82 (9%)
Frame = +2
Query: 392 LPAKEGKENAKPR----YKAPKI----QRLVTPVVLQRRTSIALSPSQKKRLAKRKSAEA 547
LP+ EGKEN K R Y +I ++ + V+ Q S L +++K K+
Sbjct: 166 LPSSEGKENKKVRFAQNYTTSQITDVWKKFLNTVISQMTDSFELERAKQKSAQTTKALAP 225
Query: 548 DYAKLLAQRKKESKVRRQEEIK 613
+++RKK+ +Q EI+
Sbjct: 226 HQHIEISERKKKRVAEKQSEIE 247
>L23648-7|AAA28031.2| 962|Caenorhabditis elegans Abnormal cell
lineage protein 36 protein.
Length = 962
Score = 30.7 bits (66), Expect = 0.97
Identities = 23/111 (20%), Positives = 51/111 (45%), Gaps = 1/111 (0%)
Frame = +2
Query: 260 AQEIPGLTDGEVPRR-LGPKRASKIRKLFNLKKEDDVRRYVVKRLLPAKEGKENAKPRYK 436
+ ++ LT + P+ +G K +L +++ V K +PA AK R
Sbjct: 475 SDDVSELTSHQSPQAPMGSGERRKATRLATSATNSPIKK-VAKHEVPATAPSTPAKKRKI 533
Query: 437 APKIQRLVTPVVLQRRTSIALSPSQKKRLAKRKSAEADYAKLLAQRKKESK 589
+ + + TP ++R ++ SP+ + + K + +AK++ +R ++ K
Sbjct: 534 SHEEEHDPTPESVEREPTV--SPNDPRERLRLKERDEQFAKMVQKRSQQVK 582
>AF104917-1|AAD22772.1| 962|Caenorhabditis elegans LIN-36 protein.
Length = 962
Score = 30.7 bits (66), Expect = 0.97
Identities = 23/111 (20%), Positives = 51/111 (45%), Gaps = 1/111 (0%)
Frame = +2
Query: 260 AQEIPGLTDGEVPRR-LGPKRASKIRKLFNLKKEDDVRRYVVKRLLPAKEGKENAKPRYK 436
+ ++ LT + P+ +G K +L +++ V K +PA AK R
Sbjct: 475 SDDVSELTSHQSPQAPMGSGERRKATRLATSATNSPIKK-VAKHEVPATAPSTPAKKRKI 533
Query: 437 APKIQRLVTPVVLQRRTSIALSPSQKKRLAKRKSAEADYAKLLAQRKKESK 589
+ + + TP ++R ++ SP+ + + K + +AK++ +R ++ K
Sbjct: 534 SHEEEHDPTPESVEREPTV--SPNDPRERLRLKERDEQFAKMVQKRSQQVK 582
>Z46267-15|CAI79255.1| 1100|Caenorhabditis elegans Hypothetical
protein F49E2.5j protein.
Length = 1100
Score = 29.9 bits (64), Expect = 1.7
Identities = 23/102 (22%), Positives = 47/102 (46%), Gaps = 1/102 (0%)
Frame = +2
Query: 311 PKRASKIRKLFNLKKEDDVRR-YVVKRLLPAKEGKENAKPRYKAPKIQRLVTPVVLQRRT 487
P++ K++K K + + + + ++ + AK+ E R +A +R Q
Sbjct: 64 PQQVEKVKKSEKKKAQKQIAKDHEAEQKVNAKKAAEKEARRAEAEAKKRAA-----QEEE 118
Query: 488 SIALSPSQKKRLAKRKSAEADYAKLLAQRKKESKVRRQEEIK 613
Q++ +++ EAD KL A++KKE V+ ++ K
Sbjct: 119 HKQWKAEQERIQKEQEKKEADLKKLQAEKKKEKAVKAEKAEK 160
>Z46267-14|CAI79254.1| 1030|Caenorhabditis elegans Hypothetical
protein F49E2.5i protein.
Length = 1030
Score = 29.9 bits (64), Expect = 1.7
Identities = 23/102 (22%), Positives = 47/102 (46%), Gaps = 1/102 (0%)
Frame = +2
Query: 311 PKRASKIRKLFNLKKEDDVRR-YVVKRLLPAKEGKENAKPRYKAPKIQRLVTPVVLQRRT 487
P++ K++K K + + + + ++ + AK+ E R +A +R Q
Sbjct: 64 PQQVEKVKKSEKKKAQKQIAKDHEAEQKVNAKKAAEKEARRAEAEAKKRAA-----QEEE 118
Query: 488 SIALSPSQKKRLAKRKSAEADYAKLLAQRKKESKVRRQEEIK 613
Q++ +++ EAD KL A++KKE V+ ++ K
Sbjct: 119 HKQWKAEQERIQKEQEKKEADLKKLQAEKKKEKAVKAEKAEK 160
>Z46267-13|CAH04746.1| 845|Caenorhabditis elegans Hypothetical
protein F49E2.5h protein.
Length = 845
Score = 29.9 bits (64), Expect = 1.7
Identities = 23/102 (22%), Positives = 47/102 (46%), Gaps = 1/102 (0%)
Frame = +2
Query: 311 PKRASKIRKLFNLKKEDDVRR-YVVKRLLPAKEGKENAKPRYKAPKIQRLVTPVVLQRRT 487
P++ K++K K + + + + ++ + AK+ E R +A +R Q
Sbjct: 64 PQQVEKVKKSEKKKAQKQIAKDHEAEQKVNAKKAAEKEARRAEAEAKKRAA-----QEEE 118
Query: 488 SIALSPSQKKRLAKRKSAEADYAKLLAQRKKESKVRRQEEIK 613
Q++ +++ EAD KL A++KKE V+ ++ K
Sbjct: 119 HKQWKAEQERIQKEQEKKEADLKKLQAEKKKEKAVKAEKAEK 160
>Z46267-12|CAD45595.2| 528|Caenorhabditis elegans Hypothetical
protein F49E2.5g protein.
Length = 528
Score = 29.9 bits (64), Expect = 1.7
Identities = 23/102 (22%), Positives = 47/102 (46%), Gaps = 1/102 (0%)
Frame = +2
Query: 311 PKRASKIRKLFNLKKEDDVRR-YVVKRLLPAKEGKENAKPRYKAPKIQRLVTPVVLQRRT 487
P++ K++K K + + + + ++ + AK+ E R +A +R Q
Sbjct: 64 PQQVEKVKKSEKKKAQKQIAKDHEAEQKVNAKKAAEKEARRAEAEAKKRAA-----QEEE 118
Query: 488 SIALSPSQKKRLAKRKSAEADYAKLLAQRKKESKVRRQEEIK 613
Q++ +++ EAD KL A++KKE V+ ++ K
Sbjct: 119 HKQWKAEQERIQKEQEKKEADLKKLQAEKKKEKAVKAEKAEK 160
>Z46267-11|CAA86426.1| 611|Caenorhabditis elegans Hypothetical
protein F49E2.5f protein.
Length = 611
Score = 29.9 bits (64), Expect = 1.7
Identities = 23/102 (22%), Positives = 47/102 (46%), Gaps = 1/102 (0%)
Frame = +2
Query: 311 PKRASKIRKLFNLKKEDDVRR-YVVKRLLPAKEGKENAKPRYKAPKIQRLVTPVVLQRRT 487
P++ K++K K + + + + ++ + AK+ E R +A +R Q
Sbjct: 64 PQQVEKVKKSEKKKAQKQIAKDHEAEQKVNAKKAAEKEARRAEAEAKKRAA-----QEEE 118
Query: 488 SIALSPSQKKRLAKRKSAEADYAKLLAQRKKESKVRRQEEIK 613
Q++ +++ EAD KL A++KKE V+ ++ K
Sbjct: 119 HKQWKAEQERIQKEQEKKEADLKKLQAEKKKEKAVKAEKAEK 160
>Z46267-10|CAA86425.1| 581|Caenorhabditis elegans Hypothetical
protein F49E2.5e protein.
Length = 581
Score = 29.9 bits (64), Expect = 1.7
Identities = 23/102 (22%), Positives = 47/102 (46%), Gaps = 1/102 (0%)
Frame = +2
Query: 311 PKRASKIRKLFNLKKEDDVRR-YVVKRLLPAKEGKENAKPRYKAPKIQRLVTPVVLQRRT 487
P++ K++K K + + + + ++ + AK+ E R +A +R Q
Sbjct: 64 PQQVEKVKKSEKKKAQKQIAKDHEAEQKVNAKKAAEKEARRAEAEAKKRAA-----QEEE 118
Query: 488 SIALSPSQKKRLAKRKSAEADYAKLLAQRKKESKVRRQEEIK 613
Q++ +++ EAD KL A++KKE V+ ++ K
Sbjct: 119 HKQWKAEQERIQKEQEKKEADLKKLQAEKKKEKAVKAEKAEK 160
>Z46267-9|CAA86427.2| 889|Caenorhabditis elegans Hypothetical
protein F49E2.5d protein.
Length = 889
Score = 29.9 bits (64), Expect = 1.7
Identities = 23/102 (22%), Positives = 47/102 (46%), Gaps = 1/102 (0%)
Frame = +2
Query: 311 PKRASKIRKLFNLKKEDDVRR-YVVKRLLPAKEGKENAKPRYKAPKIQRLVTPVVLQRRT 487
P++ K++K K + + + + ++ + AK+ E R +A +R Q
Sbjct: 64 PQQVEKVKKSEKKKAQKQIAKDHEAEQKVNAKKAAEKEARRAEAEAKKRAA-----QEEE 118
Query: 488 SIALSPSQKKRLAKRKSAEADYAKLLAQRKKESKVRRQEEIK 613
Q++ +++ EAD KL A++KKE V+ ++ K
Sbjct: 119 HKQWKAEQERIQKEQEKKEADLKKLQAEKKKEKAVKAEKAEK 160
>Z46267-8|CAA86424.2| 1030|Caenorhabditis elegans Hypothetical
protein F49E2.5c protein.
Length = 1030
Score = 29.9 bits (64), Expect = 1.7
Identities = 23/102 (22%), Positives = 47/102 (46%), Gaps = 1/102 (0%)
Frame = +2
Query: 311 PKRASKIRKLFNLKKEDDVRR-YVVKRLLPAKEGKENAKPRYKAPKIQRLVTPVVLQRRT 487
P++ K++K K + + + + ++ + AK+ E R +A +R Q
Sbjct: 64 PQQVEKVKKSEKKKAQKQIAKDHEAEQKVNAKKAAEKEARRAEAEAKKRAA-----QEEE 118
Query: 488 SIALSPSQKKRLAKRKSAEADYAKLLAQRKKESKVRRQEEIK 613
Q++ +++ EAD KL A++KKE V+ ++ K
Sbjct: 119 HKQWKAEQERIQKEQEKKEADLKKLQAEKKKEKAVKAEKAEK 160
>Z46267-7|CAA86429.2| 947|Caenorhabditis elegans Hypothetical
protein F49E2.5b protein.
Length = 947
Score = 29.9 bits (64), Expect = 1.7
Identities = 23/102 (22%), Positives = 47/102 (46%), Gaps = 1/102 (0%)
Frame = +2
Query: 311 PKRASKIRKLFNLKKEDDVRR-YVVKRLLPAKEGKENAKPRYKAPKIQRLVTPVVLQRRT 487
P++ K++K K + + + + ++ + AK+ E R +A +R Q
Sbjct: 64 PQQVEKVKKSEKKKAQKQIAKDHEAEQKVNAKKAAEKEARRAEAEAKKRAA-----QEEE 118
Query: 488 SIALSPSQKKRLAKRKSAEADYAKLLAQRKKESKVRRQEEIK 613
Q++ +++ EAD KL A++KKE V+ ++ K
Sbjct: 119 HKQWKAEQERIQKEQEKKEADLKKLQAEKKKEKAVKAEKAEK 160
>Z46267-6|CAA86428.2| 1215|Caenorhabditis elegans Hypothetical
protein F49E2.5a protein.
Length = 1215
Score = 29.9 bits (64), Expect = 1.7
Identities = 23/102 (22%), Positives = 47/102 (46%), Gaps = 1/102 (0%)
Frame = +2
Query: 311 PKRASKIRKLFNLKKEDDVRR-YVVKRLLPAKEGKENAKPRYKAPKIQRLVTPVVLQRRT 487
P++ K++K K + + + + ++ + AK+ E R +A +R Q
Sbjct: 64 PQQVEKVKKSEKKKAQKQIAKDHEAEQKVNAKKAAEKEARRAEAEAKKRAA-----QEEE 118
Query: 488 SIALSPSQKKRLAKRKSAEADYAKLLAQRKKESKVRRQEEIK 613
Q++ +++ EAD KL A++KKE V+ ++ K
Sbjct: 119 HKQWKAEQERIQKEQEKKEADLKKLQAEKKKEKAVKAEKAEK 160
>U00058-2|AAL02528.2| 832|Caenorhabditis elegans Hypothetical
protein W03A5.1 protein.
Length = 832
Score = 29.9 bits (64), Expect = 1.7
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +2
Query: 356 EDDVRRYVVKRLLPAKEGKENAKPRYKAPKIQRL 457
+DD RRY K L + N KPRYK K +
Sbjct: 276 DDDGRRYFCKLLKQIAQKTANPKPRYKLSKCSHI 309
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 28.7 bits (61), Expect = 3.9
Identities = 17/62 (27%), Positives = 29/62 (46%)
Frame = -3
Query: 309 PRRRGTSPSVSPGISCAPLRTMTRAKTERLASTMQPRTDLRFLSPSRRGL*QEWPFDIKR 130
P T+P+ +P + P T T AKT + ++T +T +P+ + PFD +
Sbjct: 269 PTTTTTTPTTTPTTTTTPTTTTTTAKTTK-STTTTTKTTKTTSTPTTTTTTPKTPFDTSK 327
Query: 129 RT 124
T
Sbjct: 328 CT 329
>U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical protein
T24H7.2 protein.
Length = 925
Score = 28.7 bits (61), Expect = 3.9
Identities = 27/97 (27%), Positives = 45/97 (46%), Gaps = 2/97 (2%)
Frame = +2
Query: 329 IRKLFNLKKEDDVRRYVVKRLLPAKEGKENAKPRYKAPKIQRLVTPVVLQRRTSIALSPS 508
+RK +LKK+ D + K + + R+ K++++ T L + I +
Sbjct: 829 VRKHLDLKKKTDDFNFTGKDIDTKTKNLNREVDRFMK-KMKKITTLDDLAKDGKIDIDTI 887
Query: 509 QKKRLAKRKSAEADYAKLLAQRKK--ESKVRRQEEIK 613
++ A++K AE D K KK ESKV + EIK
Sbjct: 888 VEE--AEKKKAEQDKKKEKKSTKKANESKVENESEIK 922
>Z77652-11|CAI70405.1| 310|Caenorhabditis elegans Hypothetical
protein C06B3.13 protein.
Length = 310
Score = 27.9 bits (59), Expect = 6.8
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = +3
Query: 393 YLPKRARKMQNPDTRRLKSR 452
YL KR +KM+NP ++L++R
Sbjct: 190 YLSKRRKKMENPAMKKLRTR 209
>Z32683-4|CAA83629.1| 443|Caenorhabditis elegans Hypothetical
protein R07E5.6 protein.
Length = 443
Score = 27.9 bits (59), Expect = 6.8
Identities = 20/87 (22%), Positives = 43/87 (49%)
Frame = +2
Query: 353 KEDDVRRYVVKRLLPAKEGKENAKPRYKAPKIQRLVTPVVLQRRTSIALSPSQKKRLAKR 532
KE DVRR R KE E + + + ++ ++++ + +K+R+ K
Sbjct: 217 KEIDVRR----READIKEMAETERKEKEKVEKNKMEMTEKIKKKDEDEKAKKEKERIDKE 272
Query: 533 KSAEADYAKLLAQRKKESKVRRQEEIK 613
+ + + + ++KKE K +R++E+K
Sbjct: 273 EKIKKEVEEA-EKKKKEEKEKRRKEVK 298
>U41992-7|AAA83358.1| 374|Caenorhabditis elegans Hypothetical
protein F32E10.6 protein.
Length = 374
Score = 27.9 bits (59), Expect = 6.8
Identities = 24/112 (21%), Positives = 47/112 (41%), Gaps = 3/112 (2%)
Frame = +2
Query: 284 DGEVPRRLGPKRASKIRKLFNLKKEDDVRRYVVKRLLPAKEGKENAKPRYKAPKIQRLVT 463
D E + K++ K ++ ++EDD VVK K+ K P + +++ V
Sbjct: 228 DDEEEEPVATKKSKKSKRAETPEEEDDEEEEVVKTPKKTKKSKRAETPE-EEDEVEEEV- 285
Query: 464 PVVLQRRTSIALSPSQKKRLA---KRKSAEADYAKLLAQRKKESKVRRQEEI 610
V +++ + SP + KR + E D + KK+ K + + +
Sbjct: 286 -VKTPKKSKSSKSPKKSKRAETSDEEDEDEEDEKEAPKSSKKQEKAKSSKRV 336
>U23139-6|AAK31489.2| 520|Caenorhabditis elegans Hypothetical
protein F13H8.8 protein.
Length = 520
Score = 27.9 bits (59), Expect = 6.8
Identities = 23/78 (29%), Positives = 35/78 (44%)
Frame = +2
Query: 314 KRASKIRKLFNLKKEDDVRRYVVKRLLPAKEGKENAKPRYKAPKIQRLVTPVVLQRRTSI 493
KR S RK +K+ DVR+ K K+N+K K + +P +T
Sbjct: 153 KRNSSRRKKNGRRKKSDVRKAQQGSDERKKHKKQNSKNLSKEQIRSLVASPAANVDKTLE 212
Query: 494 ALSPSQKKRLAKRKSAEA 547
+ + KRL+ KSAE+
Sbjct: 213 NFASKKGKRLSVVKSAES 230
>AF098989-2|AAK18954.3| 346|Caenorhabditis elegans Hypothetical
protein F47G6.3 protein.
Length = 346
Score = 27.9 bits (59), Expect = 6.8
Identities = 28/107 (26%), Positives = 48/107 (44%), Gaps = 5/107 (4%)
Frame = +2
Query: 308 GPKRASKIRKLFNLKKEDDVRRYVVKRLLPAKEGKENAKPRYKAPKIQRLVTPVVLQRRT 487
G KR +K ++ K+ D++ + + PA + P K + TPV + +
Sbjct: 51 GKKRGTKEKE--RSKEVDELPKTAGSVMSPAPNPPKFKPPPSTPAKTNQTSTPVPTSKDS 108
Query: 488 SIALSP-SQKKRLAKRKSAEADYAKLLA----QRKKESKVRRQEEIK 613
+ + S S + A +K +A Q+ KESKV ++EEIK
Sbjct: 109 TGSKSKKSDEVGRALTPGVPGKNSKAMAVETEQKSKESKVEKKEEIK 155
>Z81541-1|CAB04411.1| 1291|Caenorhabditis elegans Hypothetical protein
F48F5.1 protein.
Length = 1291
Score = 27.5 bits (58), Expect = 9.1
Identities = 22/92 (23%), Positives = 39/92 (42%)
Frame = +2
Query: 323 SKIRKLFNLKKEDDVRRYVVKRLLPAKEGKENAKPRYKAPKIQRLVTPVVLQRRTSIALS 502
S+ RK+ KK++ ++ +L +E E K K Q LQ +
Sbjct: 856 SEARKIAEKKKDEQNQKEKEAKLRADQEKSEARKVAEKKKDEQNQKEKDKLQAKLRADQE 915
Query: 503 PSQKKRLAKRKSAEADYAKLLAQRKKESKVRR 598
S+ +++A++K E D A+ + K K R
Sbjct: 916 KSEARKIAEKKKKEEDEAQKVKNIWKHIKKMR 947
>Z71266-12|CAA95848.1| 1938|Caenorhabditis elegans Hypothetical
protein R06C7.10 protein.
Length = 1938
Score = 27.5 bits (58), Expect = 9.1
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = +2
Query: 443 KIQRLVTPVVLQRRTSIALSPSQKKRLAKRKSAEADYAKLLAQRKK 580
K ++ ++ L KK + RKS E YAKL A+R K
Sbjct: 848 KCGKMAEEMIKMAEEQKVLEAEAKKAESARKSQEEAYAKLSAERSK 893
>Z71261-8|CAA95806.1| 1938|Caenorhabditis elegans Hypothetical
protein R06C7.10 protein.
Length = 1938
Score = 27.5 bits (58), Expect = 9.1
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = +2
Query: 443 KIQRLVTPVVLQRRTSIALSPSQKKRLAKRKSAEADYAKLLAQRKK 580
K ++ ++ L KK + RKS E YAKL A+R K
Sbjct: 848 KCGKMAEEMIKMAEEQKVLEAEAKKAESARKSQEEAYAKLSAERSK 893
>X08065-1|CAA30854.1| 1938|Caenorhabditis elegans myosin 1 protein.
Length = 1938
Score = 27.5 bits (58), Expect = 9.1
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = +2
Query: 443 KIQRLVTPVVLQRRTSIALSPSQKKRLAKRKSAEADYAKLLAQRKK 580
K ++ ++ L KK + RKS E YAKL A+R K
Sbjct: 848 KCGKMAEEMIKMAEEQKVLEAEAKKAESARKSQEEAYAKLSAERSK 893
>AF003139-10|AAB54160.3| 294|Caenorhabditis elegans Hypothetical
protein F53G12.4 protein.
Length = 294
Score = 27.5 bits (58), Expect = 9.1
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = +2
Query: 383 KRLLPAKEGKENAKPRYKAPKIQRLVTPVVLQRRTSI 493
K +LP ++ KE AK PK Q LV P+VL SI
Sbjct: 243 KSILPMEKKKEEAK-----PKEQELVEPLVLSEGESI 274
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,246,744
Number of Sequences: 27780
Number of extensions: 295675
Number of successful extensions: 905
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 854
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 900
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1497472076
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -