Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0008_K03
         (489 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase doma...    25   0.43 
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              22   4.0  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               21   5.3  
DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholi...    21   5.3  
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    21   5.3  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    21   7.0  
DQ435330-1|ABD92645.1|  132|Apis mellifera OBP13 protein.              21   9.3  

>DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase domain
           protein protein.
          Length = 448

 Score = 25.0 bits (52), Expect = 0.43
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = +3

Query: 339 AFRFTESYGVIFQCNVKYCLGP 404
           A      +G++ +CN++Y L P
Sbjct: 95  AINVIRHFGIVGECNIQYALNP 116


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.8 bits (44), Expect = 4.0
 Identities = 9/30 (30%), Positives = 13/30 (43%)
 Frame = +3

Query: 6    HEAKNITFGMVPIRDPEMISITASPEAPPP 95
            H     + G   +     I ++ SPE PPP
Sbjct: 1833 HYGSRGSVGRRSVGSARNIPVSGSPEPPPP 1862


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 21.4 bits (43), Expect = 5.3
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = -3

Query: 250 WKVLLESLAIATQLRAKMPY 191
           WK +LES     Q R   PY
Sbjct: 449 WKSILESGTTTLQTRTMHPY 468


>DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholine
           receptor alpha9subunit protein.
          Length = 431

 Score = 21.4 bits (43), Expect = 5.3
 Identities = 12/32 (37%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
 Frame = -2

Query: 284 WIHGT-SFVVDDLESALRIFSHSDTTASEDAI 192
           WI  T SFV+++      I + SDT  S   I
Sbjct: 349 WISTTTSFVLNNRAGRFLILTESDTKLSSQGI 380


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 5.3
 Identities = 14/52 (26%), Positives = 23/52 (44%)
 Frame = +1

Query: 88  LLHAYAFSMPVKERSKQYASETGLLSVSRFPKTLRMASSLAVVSLWLKILRA 243
           LLH       +K  + +YA  T ++  S  P  L       +  ++L+ LRA
Sbjct: 459 LLHFCRQMYAMKVNNAEYALLTAIVIFSERPNLLEGWKVEKIQEIYLEALRA 510


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -3

Query: 466 RFFRPHDSSESLPHSHTAGSRG 401
           R F PH+ +ES+       +RG
Sbjct: 376 RIFSPHEENESVDKHPNRRARG 397


>DQ435330-1|ABD92645.1|  132|Apis mellifera OBP13 protein.
          Length = 132

 Score = 20.6 bits (41), Expect = 9.3
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -2

Query: 230 FSHSDTTASEDAIRSVFGNLDTE 162
           F ++DTT +E+  R     LD+E
Sbjct: 72  FVNADTTFNEEKFRERTTKLDSE 94


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,101
Number of Sequences: 438
Number of extensions: 3068
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13421061
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)