Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0008_K01
         (456 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC130630-1|AAI30631.1|  830|Homo sapiens PHC2 protein protein.         32   0.81 
AL513327-5|CAI13957.1|  858|Homo sapiens polyhomeotic homolog 2 ...    32   0.81 
AL513327-4|CAI13956.1|  464|Homo sapiens polyhomeotic homolog 2 ...    32   0.81 
AJ419231-1|CAD11673.1|  858|Homo sapiens polyhomeotic 2 protein.       32   0.81 
AK126604-1|BAC86609.1|  210|Homo sapiens protein ( Homo sapiens ...    31   2.5  
BC120938-1|AAI20939.1|   72|Homo sapiens small proline-rich prot...    29   7.6  
AL356867-7|CAI19806.1|   72|Homo sapiens small proline-rich prot...    29   7.6  
AF333954-1|AAK70941.1|   72|Homo sapiens small proline-rich prot...    29   7.6  
BC127820-1|AAI27821.1|  230|Homo sapiens FLJ10081 protein protein.     29   10.0 
BC069157-1|AAH69157.1|  345|Homo sapiens trace amine associated ...    29   10.0 
BC063792-1|AAH63792.1|  878|Homo sapiens FLJ10081 protein protein.     29   10.0 
BC051763-1|AAH51763.1|  830|Homo sapiens FLJ10081 protein protein.     29   10.0 
AY183470-1|AAO24661.1|  345|Homo sapiens trace amine receptor 4 ...    29   10.0 
AY050169-1|AAL13159.1|  791|Homo sapiens serum inhibited-related...    29   10.0 
AL513524-4|CAH72099.1|  345|Homo sapiens RP11-295F4.3 protein.         29   10.0 
AK023813-1|BAB14688.1|  789|Homo sapiens protein ( Homo sapiens ...    29   10.0 
AK000943-1|BAA91437.1|  530|Homo sapiens protein ( Homo sapiens ...    29   10.0 
AF380192-1|AAK71243.1|  345|Homo sapiens trace amine receptor 4 ...    29   10.0 
AF311326-1|AAG33852.1|  764|Homo sapiens testis development prot...    29   10.0 
AC079754-1|AAX88890.1|  791|Homo sapiens unknown protein.              29   10.0 
AB037731-1|BAA92548.1|  794|Homo sapiens KIAA1310 protein protein.     29   10.0 

>BC130630-1|AAI30631.1|  830|Homo sapiens PHC2 protein protein.
          Length = 830

 Score = 32.3 bits (70), Expect = 0.81
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = -3

Query: 178 EPGSTPRCPSGTPSMSPQKGYPASQPYTLNR 86
           +PG + +C   TP   PQ G+P   P+T  R
Sbjct: 387 KPGGSQQCHPPTPDTGPQNGHPEGVPHTPQR 417


>AL513327-5|CAI13957.1|  858|Homo sapiens polyhomeotic homolog 2
           (Drosophila) protein.
          Length = 858

 Score = 32.3 bits (70), Expect = 0.81
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = -3

Query: 178 EPGSTPRCPSGTPSMSPQKGYPASQPYTLNR 86
           +PG + +C   TP   PQ G+P   P+T  R
Sbjct: 416 KPGGSQQCHPPTPDTGPQNGHPEGVPHTPQR 446


>AL513327-4|CAI13956.1|  464|Homo sapiens polyhomeotic homolog 2
           (Drosophila) protein.
          Length = 464

 Score = 32.3 bits (70), Expect = 0.81
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = -3

Query: 178 EPGSTPRCPSGTPSMSPQKGYPASQPYTLNR 86
           +PG + +C   TP   PQ G+P   P+T  R
Sbjct: 21  KPGGSQQCHPPTPDTGPQNGHPEGVPHTPQR 51


>AJ419231-1|CAD11673.1|  858|Homo sapiens polyhomeotic 2 protein.
          Length = 858

 Score = 32.3 bits (70), Expect = 0.81
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = -3

Query: 178 EPGSTPRCPSGTPSMSPQKGYPASQPYTLNR 86
           +PG + +C   TP   PQ G+P   P+T  R
Sbjct: 416 KPGGSQQCHPPTPDTGPQNGHPEGVPHTPQR 446


>AK126604-1|BAC86609.1|  210|Homo sapiens protein ( Homo sapiens
           cDNA FLJ44641 fis, clone BRACE2030039. ).
          Length = 210

 Score = 30.7 bits (66), Expect = 2.5
 Identities = 13/40 (32%), Positives = 23/40 (57%)
 Frame = +3

Query: 9   IFLCCAHVFSVCGEFSWLLTAATVQFLFNVYGCEAGYPFC 128
           ++  C HV +VCG ++W +   TV + + V+ C   Y +C
Sbjct: 13  VYAWCVHVCTVCGVYAWCVHMCTV-YAWCVHVCTV-YAWC 50



 Score = 29.5 bits (63), Expect = 5.7
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = +3

Query: 9   IFLCCAHVFSVCGEFSWLLTAATVQFLFNVYGCEAGYPFC 128
           ++  C HV +VCG ++W +   TV     V+ C   Y +C
Sbjct: 150 VYAWCVHVCTVCGVYAWCVHVCTV--CMRVW-CVCMYAWC 186


>BC120938-1|AAI20939.1|   72|Homo sapiens small proline-rich protein
           2D protein.
          Length = 72

 Score = 29.1 bits (62), Expect = 7.6
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = -3

Query: 184 CVEPGSTPRCPSGTPSMSPQKGYPASQP 101
           C EP  +P+CP   P    Q+ YP   P
Sbjct: 32  CPEPCPSPKCPQPCPPQQCQQKYPPVTP 59


>AL356867-7|CAI19806.1|   72|Homo sapiens small proline-rich protein
           2D protein.
          Length = 72

 Score = 29.1 bits (62), Expect = 7.6
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = -3

Query: 184 CVEPGSTPRCPSGTPSMSPQKGYPASQP 101
           C EP  +P+CP   P    Q+ YP   P
Sbjct: 32  CPEPCPSPKCPQPCPPQQCQQKYPPVTP 59


>AF333954-1|AAK70941.1|   72|Homo sapiens small proline-rich protein
           2D protein.
          Length = 72

 Score = 29.1 bits (62), Expect = 7.6
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = -3

Query: 184 CVEPGSTPRCPSGTPSMSPQKGYPASQP 101
           C EP  +P+CP   P    Q+ YP   P
Sbjct: 32  CPEPCPSPKCPQPCPPQQCQQKYPPVTP 59


>BC127820-1|AAI27821.1|  230|Homo sapiens FLJ10081 protein protein.
          Length = 230

 Score = 28.7 bits (61), Expect = 10.0
 Identities = 18/54 (33%), Positives = 23/54 (42%)
 Frame = -3

Query: 163 PRCPSGTPSMSPQKGYPASQPYTLNRN*TVAAVSSQENSPHTLKTCAQHKKILV 2
           P  PSG+  +S     P S P T     T A  SSQ  S   LK   Q  + ++
Sbjct: 29  PASPSGSEDLSSVSSSPTSSPKTKVTTVTSAQKSSQIGSSQLLKRHVQRTEAVL 82


>BC069157-1|AAH69157.1|  345|Homo sapiens trace amine associated
           receptor 6 protein.
          Length = 345

 Score = 28.7 bits (61), Expect = 10.0
 Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 5/60 (8%)
 Frame = +2

Query: 290 HFATLHPPTVSLNSDIN----FIGC-ISPILVCKQCDTNLWFYPXNYCCFHSTFCTFVYC 454
           HF  LH PT  L + +      +G  + P  + +  ++  W++  ++C FH T C   +C
Sbjct: 59  HFKQLHSPTNFLVASLACADFLVGVTVMPFSMVRTVES-CWYFGRSFCTFH-TCCDVAFC 116


>BC063792-1|AAH63792.1|  878|Homo sapiens FLJ10081 protein protein.
          Length = 878

 Score = 28.7 bits (61), Expect = 10.0
 Identities = 18/54 (33%), Positives = 23/54 (42%)
 Frame = -3

Query: 163 PRCPSGTPSMSPQKGYPASQPYTLNRN*TVAAVSSQENSPHTLKTCAQHKKILV 2
           P  PSG+  +S     P S P T     T A  SSQ  S   LK   Q  + ++
Sbjct: 521 PASPSGSEDLSSVSSSPTSSPKTKVTTVTSAQKSSQIGSSQLLKRHVQRTEAVL 574


>BC051763-1|AAH51763.1|  830|Homo sapiens FLJ10081 protein protein.
          Length = 830

 Score = 28.7 bits (61), Expect = 10.0
 Identities = 18/54 (33%), Positives = 23/54 (42%)
 Frame = -3

Query: 163 PRCPSGTPSMSPQKGYPASQPYTLNRN*TVAAVSSQENSPHTLKTCAQHKKILV 2
           P  PSG+  +S     P S P T     T A  SSQ  S   LK   Q  + ++
Sbjct: 447 PASPSGSEDLSSVSSSPTSSPKTKVTTVTSAQKSSQIGSSQLLKRHVQRTEAVL 500


>AY183470-1|AAO24661.1|  345|Homo sapiens trace amine receptor 4
           protein.
          Length = 345

 Score = 28.7 bits (61), Expect = 10.0
 Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 5/60 (8%)
 Frame = +2

Query: 290 HFATLHPPTVSLNSDIN----FIGC-ISPILVCKQCDTNLWFYPXNYCCFHSTFCTFVYC 454
           HF  LH PT  L + +      +G  + P  + +  ++  W++  ++C FH T C   +C
Sbjct: 59  HFKQLHSPTNFLVASLACADFLVGVTVMPFSMVRTVES-CWYFGRSFCTFH-TCCDVAFC 116


>AY050169-1|AAL13159.1|  791|Homo sapiens serum inhibited-related
           protein protein.
          Length = 791

 Score = 28.7 bits (61), Expect = 10.0
 Identities = 18/54 (33%), Positives = 23/54 (42%)
 Frame = -3

Query: 163 PRCPSGTPSMSPQKGYPASQPYTLNRN*TVAAVSSQENSPHTLKTCAQHKKILV 2
           P  PSG+  +S     P S P T     T A  SSQ  S   LK   Q  + ++
Sbjct: 434 PASPSGSEDLSSVSSSPTSSPKTKVTTVTSAQKSSQIGSSQLLKRHVQRTEAVL 487


>AL513524-4|CAH72099.1|  345|Homo sapiens RP11-295F4.3 protein.
          Length = 345

 Score = 28.7 bits (61), Expect = 10.0
 Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 5/60 (8%)
 Frame = +2

Query: 290 HFATLHPPTVSLNSDIN----FIGC-ISPILVCKQCDTNLWFYPXNYCCFHSTFCTFVYC 454
           HF  LH PT  L + +      +G  + P  + +  ++  W++  ++C FH T C   +C
Sbjct: 59  HFKQLHSPTNFLVASLACADFLVGVTVMPFSMVRTVES-CWYFGRSFCTFH-TCCDVAFC 116


>AK023813-1|BAB14688.1|  789|Homo sapiens protein ( Homo sapiens
           cDNA FLJ13751 fis, clone PLACE3000339, weakly similar to
           GLUCOAMYLASE S1/S2 PRECURSOR (EC 3.2.1.3). ).
          Length = 789

 Score = 28.7 bits (61), Expect = 10.0
 Identities = 18/54 (33%), Positives = 23/54 (42%)
 Frame = -3

Query: 163 PRCPSGTPSMSPQKGYPASQPYTLNRN*TVAAVSSQENSPHTLKTCAQHKKILV 2
           P  PSG+  +S     P S P T     T A  SSQ  S   LK   Q  + ++
Sbjct: 434 PASPSGSEDLSSVSSSPTSSPKTKVTTVTSAQKSSQIGSSQLLKRHVQRTEAVL 487


>AK000943-1|BAA91437.1|  530|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10081 fis, clone HEMBA1002018. ).
          Length = 530

 Score = 28.7 bits (61), Expect = 10.0
 Identities = 18/54 (33%), Positives = 23/54 (42%)
 Frame = -3

Query: 163 PRCPSGTPSMSPQKGYPASQPYTLNRN*TVAAVSSQENSPHTLKTCAQHKKILV 2
           P  PSG+  +S     P S P T     T A  SSQ  S   LK   Q  + ++
Sbjct: 434 PASPSGSEGLSSVSSSPTSSPKTKVTTVTSAQKSSQIGSSQLLKRHVQRTEAVL 487


>AF380192-1|AAK71243.1|  345|Homo sapiens trace amine receptor 4
           protein.
          Length = 345

 Score = 28.7 bits (61), Expect = 10.0
 Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 5/60 (8%)
 Frame = +2

Query: 290 HFATLHPPTVSLNSDIN----FIGC-ISPILVCKQCDTNLWFYPXNYCCFHSTFCTFVYC 454
           HF  LH PT  L + +      +G  + P  + +  ++  W++  ++C FH T C   +C
Sbjct: 59  HFKQLHSPTNFLVASLACADFLVGVTVMPFSMVRTVES-CWYFGRSFCTFH-TCCDVAFC 116


>AF311326-1|AAG33852.1|  764|Homo sapiens testis development protein
           PRTD protein.
          Length = 764

 Score = 28.7 bits (61), Expect = 10.0
 Identities = 18/54 (33%), Positives = 23/54 (42%)
 Frame = -3

Query: 163 PRCPSGTPSMSPQKGYPASQPYTLNRN*TVAAVSSQENSPHTLKTCAQHKKILV 2
           P  PSG+  +S     P S P T     T A  SSQ  S   LK   Q  + ++
Sbjct: 409 PASPSGSEDLSSVSSSPTSSPKTKVTTVTSAQKSSQIGSSQLLKRHVQRTEAVL 462


>AC079754-1|AAX88890.1|  791|Homo sapiens unknown protein.
          Length = 791

 Score = 28.7 bits (61), Expect = 10.0
 Identities = 18/54 (33%), Positives = 23/54 (42%)
 Frame = -3

Query: 163 PRCPSGTPSMSPQKGYPASQPYTLNRN*TVAAVSSQENSPHTLKTCAQHKKILV 2
           P  PSG+  +S     P S P T     T A  SSQ  S   LK   Q  + ++
Sbjct: 434 PASPSGSEDLSSVSSSPTSSPKTKVTTVTSAQKSSQIGSSQLLKRHVQRTEAVL 487


>AB037731-1|BAA92548.1|  794|Homo sapiens KIAA1310 protein protein.
          Length = 794

 Score = 28.7 bits (61), Expect = 10.0
 Identities = 18/54 (33%), Positives = 23/54 (42%)
 Frame = -3

Query: 163 PRCPSGTPSMSPQKGYPASQPYTLNRN*TVAAVSSQENSPHTLKTCAQHKKILV 2
           P  PSG+  +S     P S P T     T A  SSQ  S   LK   Q  + ++
Sbjct: 535 PASPSGSEDLSSVSSSPTSSPKTKVTTVTSAQKSSQIGSSQLLKRHVQRTEAVL 588


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,175,474
Number of Sequences: 237096
Number of extensions: 1405179
Number of successful extensions: 3171
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 3068
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3170
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3815180866
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)