BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_J18
(715 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X77635-1|CAB55438.1| 187|Drosophila melanogaster lethal(2)essen... 158 8e-39
AY047516-1|AAK77248.1| 187|Drosophila melanogaster GH01960p pro... 158 8e-39
AJ250883-1|CAB60198.1| 187|Drosophila melanogaster Efl21 protei... 158 8e-39
AE013599-3658|AAF47041.1| 187|Drosophila melanogaster CG4533-PA... 158 8e-39
AE013599-3659|AAM68267.1| 145|Drosophila melanogaster CG4533-PB... 117 1e-26
BT001462-1|AAN71217.1| 137|Drosophila melanogaster GM22862p pro... 116 2e-26
X03891-1|CAA27527.1| 213|Drosophila melanogaster heat shock pro... 110 2e-24
J01101-1|AAA28638.1| 213|Drosophila melanogaster heat shock pro... 110 2e-24
AY118471-1|AAM49840.1| 213|Drosophila melanogaster GM13686p pro... 110 2e-24
AE014296-1633|AAF50285.1| 213|Drosophila melanogaster CG4466-PA... 110 2e-24
X03889-1|CAA27525.1| 186|Drosophila melanogaster heat shock pro... 110 2e-24
V00210-1|CAA23494.1| 186|Drosophila melanogaster protein ( D. m... 110 2e-24
J01100-1|AAA28637.1| 186|Drosophila melanogaster heat shock pro... 110 2e-24
AY061081-1|AAL28629.1| 186|Drosophila melanogaster LD06759p pro... 110 2e-24
AE014296-1632|AAF50286.1| 186|Drosophila melanogaster CG4463-PA... 110 2e-24
X03890-1|CAA27526.1| 208|Drosophila melanogaster heat shock pro... 106 3e-23
J01099-1|AAA28636.1| 208|Drosophila melanogaster heat shock pro... 106 3e-23
AY069419-1|AAL39564.1| 208|Drosophila melanogaster LD11379p pro... 106 3e-23
AE014296-1630|AAF50288.1| 208|Drosophila melanogaster CG4183-PA... 106 3e-23
M26267-1|AAA28634.1| 238|Drosophila melanogaster protein ( D.me... 102 4e-22
BT016062-1|AAV36947.1| 445|Drosophila melanogaster LP13637p pro... 101 1e-21
AE014296-1631|AAF50287.1| 445|Drosophila melanogaster CG4167-PA... 101 1e-21
BT023289-1|AAY55705.1| 199|Drosophila melanogaster IP02523p pro... 94 1e-19
AE014296-1624|AAF50292.1| 199|Drosophila melanogaster CG4190-PA... 94 1e-19
BT022082-1|AAY33498.1| 154|Drosophila melanogaster RH03891p pro... 92 6e-19
AE014296-1313|AAF50518.1| 154|Drosophila melanogaster CG7409-PA... 92 6e-19
BT023400-1|AAY55816.1| 200|Drosophila melanogaster IP01061p pro... 87 3e-17
BT022727-1|AAY55143.1| 200|Drosophila melanogaster RH36186p pro... 87 3e-17
AE014296-1629|AAF50289.1| 200|Drosophila melanogaster CG4461-PA... 87 3e-17
J01098-1|AAA28635.1| 174|Drosophila melanogaster heat shock pro... 83 4e-16
AY061439-1|AAL28987.1| 183|Drosophila melanogaster LD37169p pro... 81 1e-15
AE014298-2885|AAF48980.1| 183|Drosophila melanogaster CG14207-P... 81 1e-15
AE014298-2884|AAN09508.1| 192|Drosophila melanogaster CG14207-P... 81 1e-15
AY119034-1|AAM50894.1| 174|Drosophila melanogaster LP05734p pro... 81 2e-15
AY060412-1|AAL25451.1| 174|Drosophila melanogaster LD36162p pro... 81 2e-15
AE014296-1628|AAN11962.1| 174|Drosophila melanogaster CG4460-PB... 81 2e-15
AE014296-1627|AAF50290.1| 174|Drosophila melanogaster CG4460-PA... 81 2e-15
X06542-1|CAA29788.1| 169|Drosophila melanogaster protein ( Dros... 62 7e-10
BT025130-1|ABE73301.1| 217|Drosophila melanogaster IP07647p pro... 56 4e-08
AE014134-1762|AAF52857.1| 217|Drosophila melanogaster CG13133-P... 56 4e-08
AE014297-3396|AAF56194.2| 2072|Drosophila melanogaster CG10192-P... 30 2.7
>X77635-1|CAB55438.1| 187|Drosophila melanogaster
lethal(2)essential for life protein.
Length = 187
Score = 158 bits (383), Expect = 8e-39
Identities = 77/152 (50%), Positives = 100/152 (65%), Gaps = 2/152 (1%)
Frame = +2
Query: 233 LDQHFGLALTPEDLLTIT--PTPHLAREEYYRPWRHLAAAVKDIGSSIKVDKDKFQVNLD 406
LDQHFG L +DL++ P + R Y RPW + ++ GS++ +D +KF+V LD
Sbjct: 25 LDQHFGQGLKRDDLMSSVWNSRPTVLRSGYLRPWHTNSLQKQESGSTLNIDSEKFEVILD 84
Query: 407 VQHFTPEEISVKTVDGYIVVEAKHEEKKDEHGYISRQFVRKYALPEGSAPETVESKLSSD 586
VQ F+P EI+VK D +++VE KHEEK+DEHGY+SRQF R+Y LP P+TV S LSSD
Sbjct: 85 VQQFSPSEITVKVADKFVIVEGKHEEKQDEHGYVSRQFSRRYQLPSDVNPDTVTSSLSSD 144
Query: 587 GVLTITAPRKVPEAIKGERKVAITTTGPVRKE 682
G+LTI AP K + ER V IT TGP KE
Sbjct: 145 GLLTIKAPMKALPPPQTERLVQITQTGPSSKE 176
>AY047516-1|AAK77248.1| 187|Drosophila melanogaster GH01960p
protein.
Length = 187
Score = 158 bits (383), Expect = 8e-39
Identities = 77/152 (50%), Positives = 100/152 (65%), Gaps = 2/152 (1%)
Frame = +2
Query: 233 LDQHFGLALTPEDLLTIT--PTPHLAREEYYRPWRHLAAAVKDIGSSIKVDKDKFQVNLD 406
LDQHFG L +DL++ P + R Y RPW + ++ GS++ +D +KF+V LD
Sbjct: 25 LDQHFGQGLKRDDLMSSVWNSRPTVLRSGYLRPWHTNSLQKQESGSTLNIDSEKFEVILD 84
Query: 407 VQHFTPEEISVKTVDGYIVVEAKHEEKKDEHGYISRQFVRKYALPEGSAPETVESKLSSD 586
VQ F+P EI+VK D +++VE KHEEK+DEHGY+SRQF R+Y LP P+TV S LSSD
Sbjct: 85 VQQFSPSEITVKVADKFVIVEGKHEEKQDEHGYVSRQFSRRYQLPSDVNPDTVTSSLSSD 144
Query: 587 GVLTITAPRKVPEAIKGERKVAITTTGPVRKE 682
G+LTI AP K + ER V IT TGP KE
Sbjct: 145 GLLTIKAPMKALPPPQTERLVQITQTGPSSKE 176
>AJ250883-1|CAB60198.1| 187|Drosophila melanogaster Efl21 protein
protein.
Length = 187
Score = 158 bits (383), Expect = 8e-39
Identities = 77/152 (50%), Positives = 100/152 (65%), Gaps = 2/152 (1%)
Frame = +2
Query: 233 LDQHFGLALTPEDLLTIT--PTPHLAREEYYRPWRHLAAAVKDIGSSIKVDKDKFQVNLD 406
LDQHFG L +DL++ P + R Y RPW + ++ GS++ +D +KF+V LD
Sbjct: 25 LDQHFGQGLKRDDLMSSVWNSRPTVLRSGYLRPWHTNSLQKQESGSTLNIDSEKFEVILD 84
Query: 407 VQHFTPEEISVKTVDGYIVVEAKHEEKKDEHGYISRQFVRKYALPEGSAPETVESKLSSD 586
VQ F+P EI+VK D +++VE KHEEK+DEHGY+SRQF R+Y LP P+TV S LSSD
Sbjct: 85 VQQFSPSEITVKVADKFVIVEGKHEEKQDEHGYVSRQFSRRYQLPSDVNPDTVTSSLSSD 144
Query: 587 GVLTITAPRKVPEAIKGERKVAITTTGPVRKE 682
G+LTI AP K + ER V IT TGP KE
Sbjct: 145 GLLTIKAPMKALPPPQTERLVQITQTGPSSKE 176
>AE013599-3658|AAF47041.1| 187|Drosophila melanogaster CG4533-PA,
isoform A protein.
Length = 187
Score = 158 bits (383), Expect = 8e-39
Identities = 77/152 (50%), Positives = 100/152 (65%), Gaps = 2/152 (1%)
Frame = +2
Query: 233 LDQHFGLALTPEDLLTIT--PTPHLAREEYYRPWRHLAAAVKDIGSSIKVDKDKFQVNLD 406
LDQHFG L +DL++ P + R Y RPW + ++ GS++ +D +KF+V LD
Sbjct: 25 LDQHFGQGLKRDDLMSSVWNSRPTVLRSGYLRPWHTNSLQKQESGSTLNIDSEKFEVILD 84
Query: 407 VQHFTPEEISVKTVDGYIVVEAKHEEKKDEHGYISRQFVRKYALPEGSAPETVESKLSSD 586
VQ F+P EI+VK D +++VE KHEEK+DEHGY+SRQF R+Y LP P+TV S LSSD
Sbjct: 85 VQQFSPSEITVKVADKFVIVEGKHEEKQDEHGYVSRQFSRRYQLPSDVNPDTVTSSLSSD 144
Query: 587 GVLTITAPRKVPEAIKGERKVAITTTGPVRKE 682
G+LTI AP K + ER V IT TGP KE
Sbjct: 145 GLLTIKAPMKALPPPQTERLVQITQTGPSSKE 176
>AE013599-3659|AAM68267.1| 145|Drosophila melanogaster CG4533-PB,
isoform B protein.
Length = 145
Score = 117 bits (282), Expect = 1e-26
Identities = 53/108 (49%), Positives = 73/108 (67%), Gaps = 2/108 (1%)
Frame = +2
Query: 233 LDQHFGLALTPEDLLTIT--PTPHLAREEYYRPWRHLAAAVKDIGSSIKVDKDKFQVNLD 406
LDQHFG L +DL++ P + R Y RPW + ++ GS++ +D +KF+V LD
Sbjct: 25 LDQHFGQGLKRDDLMSSVWNSRPTVLRSGYLRPWHTNSLQKQESGSTLNIDSEKFEVILD 84
Query: 407 VQHFTPEEISVKTVDGYIVVEAKHEEKKDEHGYISRQFVRKYALPEGS 550
VQ F+P EI+VK D +++VE KHEEK+DEHGY+SRQF R+Y LP S
Sbjct: 85 VQQFSPSEITVKVADKFVIVEGKHEEKQDEHGYVSRQFSRRYQLPSES 132
>BT001462-1|AAN71217.1| 137|Drosophila melanogaster GM22862p
protein.
Length = 137
Score = 116 bits (280), Expect = 2e-26
Identities = 52/105 (49%), Positives = 72/105 (68%), Gaps = 2/105 (1%)
Frame = +2
Query: 233 LDQHFGLALTPEDLLTIT--PTPHLAREEYYRPWRHLAAAVKDIGSSIKVDKDKFQVNLD 406
LDQHFG L +DL++ P + R Y RPW + ++ GS++ +D +KF+V LD
Sbjct: 25 LDQHFGQGLKRDDLMSSVWNSRPTVLRSGYLRPWHTNSLQKQESGSTLNIDSEKFEVILD 84
Query: 407 VQHFTPEEISVKTVDGYIVVEAKHEEKKDEHGYISRQFVRKYALP 541
VQ F+P EI+VK D +++VE KHEEK+DEHGY+SRQF R+Y LP
Sbjct: 85 VQQFSPSEITVKVADKFVIVEGKHEEKQDEHGYVSRQFSRRYQLP 129
>X03891-1|CAA27527.1| 213|Drosophila melanogaster heat shock
protein hsp 27 protein.
Length = 213
Score = 110 bits (265), Expect = 2e-24
Identities = 58/109 (53%), Positives = 68/109 (62%), Gaps = 1/109 (0%)
Frame = +2
Query: 374 VDKDKFQVNLDVQHFTPEEISVKTVDGYIVVEAKHEEKKDEHGYISRQFVRKYALPEGSA 553
V KD FQV +DV F P E++VK VD +VVE KHEE++D HG I R FVRKY LP+G
Sbjct: 85 VGKDGFQVCMDVSQFKPNELTVKVVDNTVVVEGKHEEREDGHGMIQRHFVRKYTLPKGFD 144
Query: 554 PETVESKLSSDGVLTITA-PRKVPEAIKGERKVAITTTGPVRKEVRIGA 697
P V S +SSDGVLT+ A P E K ER V I TGP V+ A
Sbjct: 145 PNEVVSTVSSDGVLTLKAPPPPSKEQAKSERIVQIQQTGPAHLSVKAPA 193
>J01101-1|AAA28638.1| 213|Drosophila melanogaster heat shock
protein hsp27 protein.
Length = 213
Score = 110 bits (265), Expect = 2e-24
Identities = 58/109 (53%), Positives = 68/109 (62%), Gaps = 1/109 (0%)
Frame = +2
Query: 374 VDKDKFQVNLDVQHFTPEEISVKTVDGYIVVEAKHEEKKDEHGYISRQFVRKYALPEGSA 553
V KD FQV +DV F P E++VK VD +VVE KHEE++D HG I R FVRKY LP+G
Sbjct: 85 VGKDGFQVCMDVSQFKPNELTVKVVDNTVVVEGKHEEREDGHGMIQRHFVRKYTLPKGFD 144
Query: 554 PETVESKLSSDGVLTITA-PRKVPEAIKGERKVAITTTGPVRKEVRIGA 697
P V S +SSDGVLT+ A P E K ER V I TGP V+ A
Sbjct: 145 PNEVVSTVSSDGVLTLKAPPPPSKEQAKSERIVQIQQTGPAHLSVKAPA 193
>AY118471-1|AAM49840.1| 213|Drosophila melanogaster GM13686p
protein.
Length = 213
Score = 110 bits (265), Expect = 2e-24
Identities = 58/109 (53%), Positives = 68/109 (62%), Gaps = 1/109 (0%)
Frame = +2
Query: 374 VDKDKFQVNLDVQHFTPEEISVKTVDGYIVVEAKHEEKKDEHGYISRQFVRKYALPEGSA 553
V KD FQV +DV F P E++VK VD +VVE KHEE++D HG I R FVRKY LP+G
Sbjct: 85 VGKDGFQVCMDVSQFKPNELTVKVVDNTVVVEGKHEEREDGHGMIQRHFVRKYTLPKGFD 144
Query: 554 PETVESKLSSDGVLTITA-PRKVPEAIKGERKVAITTTGPVRKEVRIGA 697
P V S +SSDGVLT+ A P E K ER V I TGP V+ A
Sbjct: 145 PNEVVSTVSSDGVLTLKAPPPPSKEQAKSERIVQIQQTGPAHLSVKAPA 193
>AE014296-1633|AAF50285.1| 213|Drosophila melanogaster CG4466-PA
protein.
Length = 213
Score = 110 bits (265), Expect = 2e-24
Identities = 58/109 (53%), Positives = 68/109 (62%), Gaps = 1/109 (0%)
Frame = +2
Query: 374 VDKDKFQVNLDVQHFTPEEISVKTVDGYIVVEAKHEEKKDEHGYISRQFVRKYALPEGSA 553
V KD FQV +DV F P E++VK VD +VVE KHEE++D HG I R FVRKY LP+G
Sbjct: 85 VGKDGFQVCMDVSQFKPNELTVKVVDNTVVVEGKHEEREDGHGMIQRHFVRKYTLPKGFD 144
Query: 554 PETVESKLSSDGVLTITA-PRKVPEAIKGERKVAITTTGPVRKEVRIGA 697
P V S +SSDGVLT+ A P E K ER V I TGP V+ A
Sbjct: 145 PNEVVSTVSSDGVLTLKAPPPPSKEQAKSERIVQIQQTGPAHLSVKAPA 193
>X03889-1|CAA27525.1| 186|Drosophila melanogaster heat shock
protein hsp 23 protein.
Length = 186
Score = 110 bits (264), Expect = 2e-24
Identities = 56/121 (46%), Positives = 74/121 (61%), Gaps = 1/121 (0%)
Frame = +2
Query: 329 RHLAAAVKDIGSSIKVDKDKFQVNLDVQHFTPEEISVKTVDGYIVVEAKHEEKKDEHGYI 508
+ + A+ G+ K+ KD FQV +DV HF P E+ VK D ++VE HEE++D+HG+I
Sbjct: 51 KQVGASSGSSGAVSKIGKDGFQVCMDVSHFKPSELVVKVQDNSVLVEGNHEEREDDHGFI 110
Query: 509 SRQFVRKYALPEGSAPETVESKLSSDGVLTITAPRKVPEAIKG-ERKVAITTTGPVRKEV 685
+R FVR+YALP G + V S LSSDGVLTI P+ KG ER V I GP V
Sbjct: 111 TRHFVRRYALPPGYEADKVASTLSSDGVLTIKVPKPPAIEDKGNERIVQIQQVGPAHLNV 170
Query: 686 R 688
+
Sbjct: 171 K 171
>V00210-1|CAA23494.1| 186|Drosophila melanogaster protein ( D.
melanogaster heatshock gene hsp23 with flanking
sequences. ).
Length = 186
Score = 110 bits (264), Expect = 2e-24
Identities = 56/121 (46%), Positives = 74/121 (61%), Gaps = 1/121 (0%)
Frame = +2
Query: 329 RHLAAAVKDIGSSIKVDKDKFQVNLDVQHFTPEEISVKTVDGYIVVEAKHEEKKDEHGYI 508
+ + A+ G+ K+ KD FQV +DV HF P E+ VK D ++VE HEE++D+HG+I
Sbjct: 51 KQVGASSGSSGAVSKIGKDGFQVCMDVSHFKPSELVVKVQDNSVLVEGNHEEREDDHGFI 110
Query: 509 SRQFVRKYALPEGSAPETVESKLSSDGVLTITAPRKVPEAIKG-ERKVAITTTGPVRKEV 685
+R FVR+YALP G + V S LSSDGVLTI P+ KG ER V I GP V
Sbjct: 111 TRHFVRRYALPPGYEADKVASTLSSDGVLTIKVPKPPAIEDKGNERIVQIQQVGPAHLNV 170
Query: 686 R 688
+
Sbjct: 171 K 171
>J01100-1|AAA28637.1| 186|Drosophila melanogaster heat shock
protein hsp23 protein.
Length = 186
Score = 110 bits (264), Expect = 2e-24
Identities = 56/121 (46%), Positives = 74/121 (61%), Gaps = 1/121 (0%)
Frame = +2
Query: 329 RHLAAAVKDIGSSIKVDKDKFQVNLDVQHFTPEEISVKTVDGYIVVEAKHEEKKDEHGYI 508
+ + A+ G+ K+ KD FQV +DV HF P E+ VK D ++VE HEE++D+HG+I
Sbjct: 51 KQVGASSGSSGAVSKIGKDGFQVCMDVSHFKPSELVVKVQDNSVLVEGNHEEREDDHGFI 110
Query: 509 SRQFVRKYALPEGSAPETVESKLSSDGVLTITAPRKVPEAIKG-ERKVAITTTGPVRKEV 685
+R FVR+YALP G + V S LSSDGVLTI P+ KG ER V I GP V
Sbjct: 111 TRHFVRRYALPPGYEADKVASTLSSDGVLTIKVPKPPAIEDKGNERIVQIQQVGPAHLNV 170
Query: 686 R 688
+
Sbjct: 171 K 171
>AY061081-1|AAL28629.1| 186|Drosophila melanogaster LD06759p
protein.
Length = 186
Score = 110 bits (264), Expect = 2e-24
Identities = 56/121 (46%), Positives = 74/121 (61%), Gaps = 1/121 (0%)
Frame = +2
Query: 329 RHLAAAVKDIGSSIKVDKDKFQVNLDVQHFTPEEISVKTVDGYIVVEAKHEEKKDEHGYI 508
+ + A+ G+ K+ KD FQV +DV HF P E+ VK D ++VE HEE++D+HG+I
Sbjct: 51 KQVGASSGSSGAVSKIGKDGFQVCMDVSHFKPSELVVKVQDNSVLVEGNHEEREDDHGFI 110
Query: 509 SRQFVRKYALPEGSAPETVESKLSSDGVLTITAPRKVPEAIKG-ERKVAITTTGPVRKEV 685
+R FVR+YALP G + V S LSSDGVLTI P+ KG ER V I GP V
Sbjct: 111 TRHFVRRYALPPGYEADKVASTLSSDGVLTIKVPKPPAIEDKGNERIVQIQQVGPAHLNV 170
Query: 686 R 688
+
Sbjct: 171 K 171
>AE014296-1632|AAF50286.1| 186|Drosophila melanogaster CG4463-PA
protein.
Length = 186
Score = 110 bits (264), Expect = 2e-24
Identities = 56/121 (46%), Positives = 74/121 (61%), Gaps = 1/121 (0%)
Frame = +2
Query: 329 RHLAAAVKDIGSSIKVDKDKFQVNLDVQHFTPEEISVKTVDGYIVVEAKHEEKKDEHGYI 508
+ + A+ G+ K+ KD FQV +DV HF P E+ VK D ++VE HEE++D+HG+I
Sbjct: 51 KQVGASSGSSGAVSKIGKDGFQVCMDVSHFKPSELVVKVQDNSVLVEGNHEEREDDHGFI 110
Query: 509 SRQFVRKYALPEGSAPETVESKLSSDGVLTITAPRKVPEAIKG-ERKVAITTTGPVRKEV 685
+R FVR+YALP G + V S LSSDGVLTI P+ KG ER V I GP V
Sbjct: 111 TRHFVRRYALPPGYEADKVASTLSSDGVLTIKVPKPPAIEDKGNERIVQIQQVGPAHLNV 170
Query: 686 R 688
+
Sbjct: 171 K 171
>X03890-1|CAA27526.1| 208|Drosophila melanogaster heat shock
protein hsp26 protein.
Length = 208
Score = 106 bits (254), Expect = 3e-23
Identities = 53/108 (49%), Positives = 73/108 (67%), Gaps = 3/108 (2%)
Frame = +2
Query: 374 VDKDKFQVNLDVQHFTPEEISVKTVDGYIVVEAKHEEKKDEHGYISRQFVRKYALPEGSA 553
V KD FQV +DV F P E++VK VD I+VE KHEE++D+HG+I R FVR+Y +P+G
Sbjct: 84 VGKDGFQVCMDVAQFKPSELNVKVVDDSILVEGKHEERQDDHGHIMRHFVRRYKVPDGYK 143
Query: 554 PETVESKLSSDGVLTITAPRKVPEAIKG---ERKVAITTTGPVRKEVR 688
E V S+LSSDGVLT++ P+ P+A++ ER + I GP V+
Sbjct: 144 AEQVVSQLSSDGVLTVSIPK--PQAVEDKSKERIIQIQQVGPAHLNVK 189
>J01099-1|AAA28636.1| 208|Drosophila melanogaster heat shock
protein hsp26 protein.
Length = 208
Score = 106 bits (254), Expect = 3e-23
Identities = 53/108 (49%), Positives = 73/108 (67%), Gaps = 3/108 (2%)
Frame = +2
Query: 374 VDKDKFQVNLDVQHFTPEEISVKTVDGYIVVEAKHEEKKDEHGYISRQFVRKYALPEGSA 553
V KD FQV +DV F P E++VK VD I+VE KHEE++D+HG+I R FVR+Y +P+G
Sbjct: 84 VGKDGFQVCMDVAQFKPSELNVKVVDDSILVEGKHEERQDDHGHIMRHFVRRYKVPDGYK 143
Query: 554 PETVESKLSSDGVLTITAPRKVPEAIKG---ERKVAITTTGPVRKEVR 688
E V S+LSSDGVLT++ P+ P+A++ ER + I GP V+
Sbjct: 144 AEQVVSQLSSDGVLTVSIPK--PQAVEDKSKERIIQIQQVGPAHLNVK 189
>AY069419-1|AAL39564.1| 208|Drosophila melanogaster LD11379p
protein.
Length = 208
Score = 106 bits (254), Expect = 3e-23
Identities = 53/108 (49%), Positives = 73/108 (67%), Gaps = 3/108 (2%)
Frame = +2
Query: 374 VDKDKFQVNLDVQHFTPEEISVKTVDGYIVVEAKHEEKKDEHGYISRQFVRKYALPEGSA 553
V KD FQV +DV F P E++VK VD I+VE KHEE++D+HG+I R FVR+Y +P+G
Sbjct: 84 VGKDGFQVCMDVAQFKPSELNVKVVDDSILVEGKHEERQDDHGHIMRHFVRRYKVPDGYK 143
Query: 554 PETVESKLSSDGVLTITAPRKVPEAIKG---ERKVAITTTGPVRKEVR 688
E V S+LSSDGVLT++ P+ P+A++ ER + I GP V+
Sbjct: 144 AEQVVSQLSSDGVLTVSIPK--PQAVEDKSKERIIQIQQVGPAHLNVK 189
>AE014296-1630|AAF50288.1| 208|Drosophila melanogaster CG4183-PA
protein.
Length = 208
Score = 106 bits (254), Expect = 3e-23
Identities = 53/108 (49%), Positives = 73/108 (67%), Gaps = 3/108 (2%)
Frame = +2
Query: 374 VDKDKFQVNLDVQHFTPEEISVKTVDGYIVVEAKHEEKKDEHGYISRQFVRKYALPEGSA 553
V KD FQV +DV F P E++VK VD I+VE KHEE++D+HG+I R FVR+Y +P+G
Sbjct: 84 VGKDGFQVCMDVAQFKPSELNVKVVDDSILVEGKHEERQDDHGHIMRHFVRRYKVPDGYK 143
Query: 554 PETVESKLSSDGVLTITAPRKVPEAIKG---ERKVAITTTGPVRKEVR 688
E V S+LSSDGVLT++ P+ P+A++ ER + I GP V+
Sbjct: 144 AEQVVSQLSSDGVLTVSIPK--PQAVEDKSKERIIQIQQVGPAHLNVK 189
>M26267-1|AAA28634.1| 238|Drosophila melanogaster protein (
D.melanogaster heatshock protein 1 gene, complete cds.
).
Length = 238
Score = 102 bits (245), Expect = 4e-22
Identities = 46/88 (52%), Positives = 66/88 (75%)
Frame = +2
Query: 374 VDKDKFQVNLDVQHFTPEEISVKTVDGYIVVEAKHEEKKDEHGYISRQFVRKYALPEGSA 553
V+++ FQV+++V+ F E++VKT+D IVVE +H+EK+D HG ISR F+RKY LP+G
Sbjct: 122 VNRNGFQVSMNVKQFAANELTVKTIDNCIVVEGQHDEKEDGHGVISRHFIRKYILPKGYD 181
Query: 554 PETVESKLSSDGVLTITAPRKVPEAIKG 637
P V S LSSDG+LT+ AP+ +P +KG
Sbjct: 182 PNEVHSTLSSDGILTVKAPQPLP-VVKG 208
>BT016062-1|AAV36947.1| 445|Drosophila melanogaster LP13637p
protein.
Length = 445
Score = 101 bits (242), Expect = 1e-21
Identities = 46/88 (52%), Positives = 65/88 (73%)
Frame = +2
Query: 374 VDKDKFQVNLDVQHFTPEEISVKTVDGYIVVEAKHEEKKDEHGYISRQFVRKYALPEGSA 553
V+++ FQV+++V+ F E++VKT+D IVVE +H+EK+D HG ISR F+RKY LP+G
Sbjct: 122 VNRNGFQVSMNVKQFAANELTVKTIDNCIVVEGQHDEKEDGHGVISRHFIRKYILPKGYD 181
Query: 554 PETVESKLSSDGVLTITAPRKVPEAIKG 637
P V S LSSDG+LT+ AP +P +KG
Sbjct: 182 PNEVHSTLSSDGILTVKAPPPLP-VVKG 208
>AE014296-1631|AAF50287.1| 445|Drosophila melanogaster CG4167-PA
protein.
Length = 445
Score = 101 bits (242), Expect = 1e-21
Identities = 46/88 (52%), Positives = 65/88 (73%)
Frame = +2
Query: 374 VDKDKFQVNLDVQHFTPEEISVKTVDGYIVVEAKHEEKKDEHGYISRQFVRKYALPEGSA 553
V+++ FQV+++V+ F E++VKT+D IVVE +H+EK+D HG ISR F+RKY LP+G
Sbjct: 122 VNRNGFQVSMNVKQFAANELTVKTIDNCIVVEGQHDEKEDGHGVISRHFIRKYILPKGYD 181
Query: 554 PETVESKLSSDGVLTITAPRKVPEAIKG 637
P V S LSSDG+LT+ AP +P +KG
Sbjct: 182 PNEVHSTLSSDGILTVKAPPPLP-VVKG 208
>BT023289-1|AAY55705.1| 199|Drosophila melanogaster IP02523p
protein.
Length = 199
Score = 94.3 bits (224), Expect = 1e-19
Identities = 51/110 (46%), Positives = 70/110 (63%)
Frame = +2
Query: 341 AAVKDIGSSIKVDKDKFQVNLDVQHFTPEEISVKTVDGYIVVEAKHEEKKDEHGYISRQF 520
AA+ G+S K + F+V+LDV F P E++VK V+ IVVE KHEE++D+HG++SR F
Sbjct: 67 AALSRGGASNK--QGNFEVHLDVGLFQPGELTVKLVNECIVVEGKHEEREDDHGHVSRHF 124
Query: 521 VRKYALPEGSAPETVESKLSSDGVLTITAPRKVPEAIKGERKVAITTTGP 670
VR+Y LP+ + + S LS DGVL IT P V + ER + I GP
Sbjct: 125 VRRYPLPKEFDSDAIVSTLSEDGVLNITVPPLVSKEELKERIIPIKHVGP 174
>AE014296-1624|AAF50292.1| 199|Drosophila melanogaster CG4190-PA
protein.
Length = 199
Score = 94.3 bits (224), Expect = 1e-19
Identities = 51/110 (46%), Positives = 70/110 (63%)
Frame = +2
Query: 341 AAVKDIGSSIKVDKDKFQVNLDVQHFTPEEISVKTVDGYIVVEAKHEEKKDEHGYISRQF 520
AA+ G+S K + F+V+LDV F P E++VK V+ IVVE KHEE++D+HG++SR F
Sbjct: 67 AALSRGGASNK--QGNFEVHLDVGLFQPGELTVKLVNECIVVEGKHEEREDDHGHVSRHF 124
Query: 521 VRKYALPEGSAPETVESKLSSDGVLTITAPRKVPEAIKGERKVAITTTGP 670
VR+Y LP+ + + S LS DGVL IT P V + ER + I GP
Sbjct: 125 VRRYPLPKEFDSDAIVSTLSEDGVLNITVPPLVSKEELKERIIPIKHVGP 174
>BT022082-1|AAY33498.1| 154|Drosophila melanogaster RH03891p
protein.
Length = 154
Score = 92.3 bits (219), Expect = 6e-19
Identities = 46/103 (44%), Positives = 63/103 (61%)
Frame = +2
Query: 362 SSIKVDKDKFQVNLDVQHFTPEEISVKTVDGYIVVEAKHEEKKDEHGYISRQFVRKYALP 541
S + V KD F+ N+DV F P EISVKT +VVEAKHE+++D ++ R V+++ LP
Sbjct: 49 SRVIVGKDGFEANVDVHLFKPYEISVKTSGDTVVVEAKHEKRRDGDTFVGRHIVKRFVLP 108
Query: 542 EGSAPETVESKLSSDGVLTITAPRKVPEAIKGERKVAITTTGP 670
G P V S+LSSDG+LT+ K P + ER V + GP
Sbjct: 109 RGYYPNDVRSELSSDGILTV----KCPPYLTNERSVYVRQVGP 147
>AE014296-1313|AAF50518.1| 154|Drosophila melanogaster CG7409-PA
protein.
Length = 154
Score = 92.3 bits (219), Expect = 6e-19
Identities = 46/103 (44%), Positives = 63/103 (61%)
Frame = +2
Query: 362 SSIKVDKDKFQVNLDVQHFTPEEISVKTVDGYIVVEAKHEEKKDEHGYISRQFVRKYALP 541
S + V KD F+ N+DV F P EISVKT +VVEAKHE+++D ++ R V+++ LP
Sbjct: 49 SRVIVGKDGFEANVDVHLFKPYEISVKTSGDTVVVEAKHEKRRDGDTFVGRHIVKRFVLP 108
Query: 542 EGSAPETVESKLSSDGVLTITAPRKVPEAIKGERKVAITTTGP 670
G P V S+LSSDG+LT+ K P + ER V + GP
Sbjct: 109 RGYYPNDVRSELSSDGILTV----KCPPYLTNERSVYVRQVGP 147
>BT023400-1|AAY55816.1| 200|Drosophila melanogaster IP01061p
protein.
Length = 200
Score = 86.6 bits (205), Expect = 3e-17
Identities = 44/106 (41%), Positives = 62/106 (58%), Gaps = 3/106 (2%)
Frame = +2
Query: 359 GSSIKVDKDKFQVNLDVQHFTPEEISVKTVDGYIVVEAKHEEKKD-EHGYISRQFVRKYA 535
G + VD+ F++++DV+ F P +I VKT D Y++V+ H + + +G + R FVRKY
Sbjct: 88 GERVHVDEKGFRIDIDVRQFHPHDIVVKTNDDYVIVQGNHNRRDEGSNGLVERHFVRKYL 147
Query: 536 LPEGSAPETVESKLSSDGVLTITAPRKVPEA--IKGERKVAITTTG 667
LP G V S +SSDG+LTI AP P GER V + TG
Sbjct: 148 LPRGYNANEVISDISSDGILTIKAPPPPPAKYYTPGERLVRVHETG 193
>BT022727-1|AAY55143.1| 200|Drosophila melanogaster RH36186p
protein.
Length = 200
Score = 86.6 bits (205), Expect = 3e-17
Identities = 44/106 (41%), Positives = 62/106 (58%), Gaps = 3/106 (2%)
Frame = +2
Query: 359 GSSIKVDKDKFQVNLDVQHFTPEEISVKTVDGYIVVEAKHEEKKD-EHGYISRQFVRKYA 535
G + VD+ F++++DV+ F P +I VKT D Y++V+ H + + +G + R FVRKY
Sbjct: 88 GERVHVDEKGFRIDIDVRQFHPHDIVVKTNDDYVIVQGNHNRRDEGSNGLVERHFVRKYL 147
Query: 536 LPEGSAPETVESKLSSDGVLTITAPRKVPEA--IKGERKVAITTTG 667
LP G V S +SSDG+LTI AP P GER V + TG
Sbjct: 148 LPRGYNANEVISDISSDGILTIKAPPPPPAKYYTPGERLVRVHETG 193
>AE014296-1629|AAF50289.1| 200|Drosophila melanogaster CG4461-PA
protein.
Length = 200
Score = 86.6 bits (205), Expect = 3e-17
Identities = 44/106 (41%), Positives = 62/106 (58%), Gaps = 3/106 (2%)
Frame = +2
Query: 359 GSSIKVDKDKFQVNLDVQHFTPEEISVKTVDGYIVVEAKHEEKKD-EHGYISRQFVRKYA 535
G + VD+ F++++DV+ F P +I VKT D Y++V+ H + + +G + R FVRKY
Sbjct: 88 GERVHVDEKGFRIDIDVRQFHPHDIVVKTNDDYVIVQGNHNRRDEGSNGLVERHFVRKYL 147
Query: 536 LPEGSAPETVESKLSSDGVLTITAPRKVPEA--IKGERKVAITTTG 667
LP G V S +SSDG+LTI AP P GER V + TG
Sbjct: 148 LPRGYNANEVISDISSDGILTIKAPPPPPAKYYTPGERLVRVHETG 193
>J01098-1|AAA28635.1| 174|Drosophila melanogaster heat shock
protein hsp22 protein.
Length = 174
Score = 83.0 bits (196), Expect = 4e-16
Identities = 52/126 (41%), Positives = 78/126 (61%), Gaps = 6/126 (4%)
Frame = +2
Query: 320 RPWRHLAA-AVKDIGSSIKVDKDKFQVNLDVQHFTPEEISVKTVDGYIV-VEAKHEEKKD 493
R W+H+A +++ V+KD +++ LDV+ ++ E+ VK +D +V VEAK E+++
Sbjct: 40 RNWQHIARWQEQELAPPATVNKDGYKLTLDVKDYS--ELKVKVLDESVVLVEAKSEQQEA 97
Query: 494 EHG-YISRQFVRKYALPEGSAPETVESKLSSDGVLTITAPRK--VPEAIKGERKVAITTT 664
E G Y SR F+ +Y LP+G + V S LS DGVLTI+ P V E +K ER+V I T
Sbjct: 98 EQGGYSSRHFLGRYVLPDGYEADKVSSSLSDDGVLTISVPNPPGVQETLK-EREVTIEQT 156
Query: 665 G-PVRK 679
G P +K
Sbjct: 157 GEPAKK 162
>AY061439-1|AAL28987.1| 183|Drosophila melanogaster LD37169p
protein.
Length = 183
Score = 81.4 bits (192), Expect = 1e-15
Identities = 45/106 (42%), Positives = 63/106 (59%), Gaps = 3/106 (2%)
Frame = +2
Query: 347 VKDIGSSI---KVDKDKFQVNLDVQHFTPEEISVKTVDGYIVVEAKHEEKKDEHGYISRQ 517
V DI S + + D ++ DV + PEEI VKTVD ++V AKHEEK D + R+
Sbjct: 78 VSDISSPLIQDEGDNKVLKLRFDVSQYAPEEIVVKTVDQKLLVHAKHEEKSDTKS-VYRE 136
Query: 518 FVRKYALPEGSAPETVESKLSSDGVLTITAPRKVPEAIKGERKVAI 655
+ R++ LP+G PE++ S LS DGVLT+ AP +P GE + I
Sbjct: 137 YNREFLLPKGVNPESIRSSLSKDGVLTVDAP--LPALTAGETLIPI 180
>AE014298-2885|AAF48980.1| 183|Drosophila melanogaster CG14207-PA,
isoform A protein.
Length = 183
Score = 81.4 bits (192), Expect = 1e-15
Identities = 45/106 (42%), Positives = 63/106 (59%), Gaps = 3/106 (2%)
Frame = +2
Query: 347 VKDIGSSI---KVDKDKFQVNLDVQHFTPEEISVKTVDGYIVVEAKHEEKKDEHGYISRQ 517
V DI S + + D ++ DV + PEEI VKTVD ++V AKHEEK D + R+
Sbjct: 78 VSDISSPLIQDEGDNKVLKLRFDVSQYAPEEIVVKTVDQKLLVHAKHEEKSDTKS-VYRE 136
Query: 518 FVRKYALPEGSAPETVESKLSSDGVLTITAPRKVPEAIKGERKVAI 655
+ R++ LP+G PE++ S LS DGVLT+ AP +P GE + I
Sbjct: 137 YNREFLLPKGVNPESIRSSLSKDGVLTVDAP--LPALTAGETLIPI 180
>AE014298-2884|AAN09508.1| 192|Drosophila melanogaster CG14207-PB,
isoform B protein.
Length = 192
Score = 81.4 bits (192), Expect = 1e-15
Identities = 45/106 (42%), Positives = 63/106 (59%), Gaps = 3/106 (2%)
Frame = +2
Query: 347 VKDIGSSI---KVDKDKFQVNLDVQHFTPEEISVKTVDGYIVVEAKHEEKKDEHGYISRQ 517
V DI S + + D ++ DV + PEEI VKTVD ++V AKHEEK D + R+
Sbjct: 87 VSDISSPLIQDEGDNKVLKLRFDVSQYAPEEIVVKTVDQKLLVHAKHEEKSDTKS-VYRE 145
Query: 518 FVRKYALPEGSAPETVESKLSSDGVLTITAPRKVPEAIKGERKVAI 655
+ R++ LP+G PE++ S LS DGVLT+ AP +P GE + I
Sbjct: 146 YNREFLLPKGVNPESIRSSLSKDGVLTVDAP--LPALTAGETLIPI 189
>AY119034-1|AAM50894.1| 174|Drosophila melanogaster LP05734p
protein.
Length = 174
Score = 80.6 bits (190), Expect = 2e-15
Identities = 52/126 (41%), Positives = 77/126 (61%), Gaps = 6/126 (4%)
Frame = +2
Query: 320 RPWRHLAA-AVKDIGSSIKVDKDKFQVNLDVQHFTPEEISVKTVDGYIV-VEAKHEEKKD 493
R W+ +A ++ V+KD +++ LDV+ ++ E+ VK +D +V VE K E+++
Sbjct: 40 RNWQQIARWQEQEFAPPATVNKDGYKLTLDVKDYS--ELKVKVLDESVVLVEGKSEQQEA 97
Query: 494 EHG-YISRQFVRKYALPEGSAPETVESKLSSDGVLTITAPRK--VPEAIKGERKVAITTT 664
E G Y SR F+R++ LPEG + V S LSSDGVLTI+ P V E +K ER+V I T
Sbjct: 98 EQGGYSSRHFLRRFVLPEGYEADKVTSTLSSDGVLTISVPNPPGVQETLK-EREVTIEQT 156
Query: 665 G-PVRK 679
G P +K
Sbjct: 157 GEPAKK 162
>AY060412-1|AAL25451.1| 174|Drosophila melanogaster LD36162p
protein.
Length = 174
Score = 80.6 bits (190), Expect = 2e-15
Identities = 52/126 (41%), Positives = 77/126 (61%), Gaps = 6/126 (4%)
Frame = +2
Query: 320 RPWRHLAA-AVKDIGSSIKVDKDKFQVNLDVQHFTPEEISVKTVDGYIV-VEAKHEEKKD 493
R W+ +A ++ V+KD +++ LDV+ ++ E+ VK +D +V VE K E+++
Sbjct: 40 RNWQQIARWQEQEFAPPATVNKDGYKLTLDVKDYS--ELKVKVLDESVVLVEGKSEQQEA 97
Query: 494 EHG-YISRQFVRKYALPEGSAPETVESKLSSDGVLTITAPRK--VPEAIKGERKVAITTT 664
E G Y SR F+R++ LPEG + V S LSSDGVLTI+ P V E +K ER+V I T
Sbjct: 98 EQGGYSSRHFLRRFVLPEGYEADKVTSTLSSDGVLTISVPNPPGVQETLK-EREVTIEQT 156
Query: 665 G-PVRK 679
G P +K
Sbjct: 157 GEPAKK 162
>AE014296-1628|AAN11962.1| 174|Drosophila melanogaster CG4460-PB,
isoform B protein.
Length = 174
Score = 80.6 bits (190), Expect = 2e-15
Identities = 52/126 (41%), Positives = 77/126 (61%), Gaps = 6/126 (4%)
Frame = +2
Query: 320 RPWRHLAA-AVKDIGSSIKVDKDKFQVNLDVQHFTPEEISVKTVDGYIV-VEAKHEEKKD 493
R W+ +A ++ V+KD +++ LDV+ ++ E+ VK +D +V VE K E+++
Sbjct: 40 RNWQQIARWQEQEFAPPATVNKDGYKLTLDVKDYS--ELKVKVLDESVVLVEGKSEQQEA 97
Query: 494 EHG-YISRQFVRKYALPEGSAPETVESKLSSDGVLTITAPRK--VPEAIKGERKVAITTT 664
E G Y SR F+R++ LPEG + V S LSSDGVLTI+ P V E +K ER+V I T
Sbjct: 98 EQGGYSSRHFLRRFVLPEGYEADKVTSTLSSDGVLTISVPNPPGVQETLK-EREVTIEQT 156
Query: 665 G-PVRK 679
G P +K
Sbjct: 157 GEPAKK 162
>AE014296-1627|AAF50290.1| 174|Drosophila melanogaster CG4460-PA,
isoform A protein.
Length = 174
Score = 80.6 bits (190), Expect = 2e-15
Identities = 52/126 (41%), Positives = 77/126 (61%), Gaps = 6/126 (4%)
Frame = +2
Query: 320 RPWRHLAA-AVKDIGSSIKVDKDKFQVNLDVQHFTPEEISVKTVDGYIV-VEAKHEEKKD 493
R W+ +A ++ V+KD +++ LDV+ ++ E+ VK +D +V VE K E+++
Sbjct: 40 RNWQQIARWQEQEFAPPATVNKDGYKLTLDVKDYS--ELKVKVLDESVVLVEGKSEQQEA 97
Query: 494 EHG-YISRQFVRKYALPEGSAPETVESKLSSDGVLTITAPRK--VPEAIKGERKVAITTT 664
E G Y SR F+R++ LPEG + V S LSSDGVLTI+ P V E +K ER+V I T
Sbjct: 98 EQGGYSSRHFLRRFVLPEGYEADKVTSTLSSDGVLTISVPNPPGVQETLK-EREVTIEQT 156
Query: 665 G-PVRK 679
G P +K
Sbjct: 157 GEPAKK 162
>X06542-1|CAA29788.1| 169|Drosophila melanogaster protein (
Drosophila heat shockgene 3 from 67B locus. ).
Length = 169
Score = 62.1 bits (144), Expect = 7e-10
Identities = 32/69 (46%), Positives = 47/69 (68%)
Frame = +2
Query: 341 AAVKDIGSSIKVDKDKFQVNLDVQHFTPEEISVKTVDGYIVVEAKHEEKKDEHGYISRQF 520
AA+ G+S K + F+V+LDV F P E++VK V+ IVVE KHEE++D+HG++SR F
Sbjct: 67 AALSRGGASNK--QGNFEVHLDVGLFQPGELTVKLVNECIVVEGKHEEREDDHGHVSRHF 124
Query: 521 VRKYALPEG 547
V + +G
Sbjct: 125 VPAVSAAQG 133
>BT025130-1|ABE73301.1| 217|Drosophila melanogaster IP07647p
protein.
Length = 217
Score = 56.4 bits (130), Expect = 4e-08
Identities = 36/96 (37%), Positives = 50/96 (52%), Gaps = 3/96 (3%)
Frame = +2
Query: 389 FQVNLDVQHFTPEEISVKTVDGYIV-VEAKHEEKKDEHGY--ISRQFVRKYALPEGSAPE 559
F+V LDV HF E++VK + V VE K + + E G I+R+F R Y LP
Sbjct: 87 FKVVLDVHHFQISELTVKAKNSDTVCVEGKQADDRAEKGQLCITREFTRSYKLPRHYDAT 146
Query: 560 TVESKLSSDGVLTITAPRKVPEAIKGERKVAITTTG 667
+ S+DG+L IT P P+ ER++ I TG
Sbjct: 147 QARATFSADGILMITVPAP-PKLDDVEREIEIEPTG 181
>AE014134-1762|AAF52857.1| 217|Drosophila melanogaster CG13133-PA
protein.
Length = 217
Score = 56.4 bits (130), Expect = 4e-08
Identities = 36/96 (37%), Positives = 50/96 (52%), Gaps = 3/96 (3%)
Frame = +2
Query: 389 FQVNLDVQHFTPEEISVKTVDGYIV-VEAKHEEKKDEHGY--ISRQFVRKYALPEGSAPE 559
F+V LDV HF E++VK + V VE K + + E G I+R+F R Y LP
Sbjct: 87 FKVVLDVHHFQISELTVKAKNSDTVCVEGKQADDRAEKGQLCITREFTRSYKLPRHYDAT 146
Query: 560 TVESKLSSDGVLTITAPRKVPEAIKGERKVAITTTG 667
+ S+DG+L IT P P+ ER++ I TG
Sbjct: 147 QARATFSADGILMITVPAP-PKLDDVEREIEIEPTG 181
>AE014297-3396|AAF56194.2| 2072|Drosophila melanogaster CG10192-PA
protein.
Length = 2072
Score = 30.3 bits (65), Expect = 2.7
Identities = 20/73 (27%), Positives = 35/73 (47%)
Frame = +2
Query: 476 HEEKKDEHGYISRQFVRKYALPEGSAPETVESKLSSDGVLTITAPRKVPEAIKGERKVAI 655
HE+ +++ G+I + + + ++ +S S+D V AP KV E I E+ +
Sbjct: 1024 HEDPRNDTGFICSSTWSSSTISKAAEDDSSQSSRSADNV--DCAP-KVVEQISEEKSASS 1080
Query: 656 TTTGPVRKEVRIG 694
T + PV K G
Sbjct: 1081 TKSSPVHKATGSG 1093
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,453,933
Number of Sequences: 53049
Number of extensions: 514073
Number of successful extensions: 1642
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 1564
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1628
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3170136354
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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