Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_J12
(589 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_1193 - 28298656-28298754,28299303-28299377,28299456-282995... 171 4e-43
06_03_0353 + 19810945-19810975,19811308-19811369,19811741-198118... 110 7e-25
02_02_0253 - 8325437-8325628,8325705-8325779,8325933-8326037,832... 107 6e-24
02_02_0739 - 13560241-13560622,13561192-13561239,13563727-13564949 102 2e-22
05_07_0067 + 27463703-27463705,27464309-27464365,27464779-274648... 101 6e-22
03_05_0339 + 23287620-23287676,23287784-23287849,23287937-232880... 99 1e-21
10_08_0620 - 19321612-19323237 93 2e-19
06_03_0477 - 21250811-21250981,21251261-21251374,21251447-212516... 91 8e-19
03_06_0362 + 33379489-33379624,33380161-33380423,33380524-333806... 90 1e-18
04_04_0729 + 27612106-27612195,27612284-27612370,27612469-276125... 85 5e-17
05_01_0337 - 2658647-2658722,2658797-2658915,2658995-2659102,265... 72 4e-13
12_01_1011 + 10292709-10292765,10293003-10293156,10294062-102941... 53 1e-07
03_06_0760 - 36067752-36068045,36068260-36068711,36069263-360695... 53 1e-07
02_01_0024 + 159595-159801,159892-160017,160201-160338,160431-16... 47 1e-05
06_01_0097 - 810283-810296,810398-810521,810974-811066,811144-81... 45 5e-05
05_06_0240 - 26629218-26629323,26629412-26629490,26629656-266297... 43 2e-04
03_01_0305 - 2383187-2383298,2383606-2383684,2383762-2383867,238... 43 2e-04
09_06_0292 + 22075647-22075691,22077394-22077507,22077602-220778... 38 0.004
10_08_0289 + 16534063-16534100,16534219-16534243,16534847-165349... 33 0.13
03_02_0118 - 5722988-5723329 33 0.13
07_01_0595 - 4432642-4432926,4433062-4433769,4433964-4434164,443... 30 1.6
03_02_0651 + 10183050-10184167,10184350-10184974,10185023-101852... 29 3.6
01_05_0687 + 24288648-24292746,24293737-24293844,24294333-242944... 28 4.8
09_04_0105 - 14633097-14635529 27 8.4
04_04_1136 - 31142742-31142806,31143245-31143325,31143432-311435... 27 8.4
>06_03_1193 -
28298656-28298754,28299303-28299377,28299456-28299544,
28299679-28299760,28300385-28300474,28300557-28300655,
28300733-28300852,28300968-28301084,28301174-28301309,
28301415-28301584,28301744-28301947,28302032-28302157,
28302841-28303101,28303215-28303229
Length = 560
Score = 171 bits (416), Expect = 4e-43
Identities = 80/109 (73%), Positives = 93/109 (85%)
Frame = +3
Query: 21 MQPQILLLREGTDQTQGKPQLISNINACQLVVDAVRTTLGPRGMDKLIVDHSGKAVISND 200
MQPQI+LL+EGTD +QG+ Q++SNINAC +V D VRTTLGPRGMDKLI D G ISND
Sbjct: 5 MQPQIILLKEGTDTSQGRAQVVSNINACTVVADTVRTTLGPRGMDKLIHDDKGGTTISND 64
Query: 201 GATIMKLLDIVHPAAKTLVDIAKSQDAEVGDGTTSVVILAGELLKRLRP 347
GATIM+LLDI+HPAAK LVDIAKSQD+EVGDGTT+VV+LA E LK +P
Sbjct: 65 GATIMRLLDIIHPAAKILVDIAKSQDSEVGDGTTTVVLLAAEFLKEAKP 113
Score = 85.4 bits (202), Expect = 3e-17
Identities = 40/74 (54%), Positives = 56/74 (75%)
Frame = +1
Query: 358 KQGVHPRVIVRAVRTAAKLAVDKVKELAVKIDKKSPEEQRELLRKCAETAMSSQLIYRRK 537
+ GVHP ++R+ RTA LA++KVK+LA I+ KS EE++ELL KCA T +SS+LI K
Sbjct: 116 EDGVHPHSLIRSYRTAGHLAIEKVKDLATSIEGKSLEEKKELLAKCAATTLSSKLIGGEK 175
Query: 538 DHFSKMVVDAVLSL 579
+ F+ MVVDAVL++
Sbjct: 176 EFFASMVVDAVLAI 189
>06_03_0353 +
19810945-19810975,19811308-19811369,19811741-19811813,
19813292-19813359,19813496-19813565,19813908-19813976,
19814065-19814136,19814247-19814320,19814420-19814697,
19814804-19815188,19815268-19815393,19815583-19815687,
19815986-19815994,19817040-19817114,19817202-19817390
Length = 561
Score = 110 bits (265), Expect = 7e-25
Identities = 48/100 (48%), Positives = 75/100 (75%)
Frame = +3
Query: 33 ILLLREGTDQTQGKPQLISNINACQLVVDAVRTTLGPRGMDKLIVDHSGKAVISNDGATI 212
+L+L++ + G +NI A + V D +RTTLGPR M K+++D SG V++NDG I
Sbjct: 7 VLVLKDSLKRESGTKVHHANIQAAKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAI 66
Query: 213 MKLLDIVHPAAKTLVDIAKSQDAEVGDGTTSVVILAGELL 332
++ +DI HPAAK++++++++QD EVGDGTTSV++LAGE+L
Sbjct: 67 LREIDIAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEML 106
>02_02_0253 -
8325437-8325628,8325705-8325779,8325933-8326037,
8326249-8326374,8326451-8326835,8326931-8327208,
8327294-8327367,8327476-8327547,8327637-8327705,
8340132-8340201,8340806-8340873,8341571-8341643,
8341807-8341868,8342168-8342198
Length = 559
Score = 107 bits (257), Expect = 6e-24
Identities = 46/100 (46%), Positives = 75/100 (75%)
Frame = +3
Query: 33 ILLLREGTDQTQGKPQLISNINACQLVVDAVRTTLGPRGMDKLIVDHSGKAVISNDGATI 212
+L+L++ + G +NI A + V D +RTTLGP+ M K+++D +G V++NDG I
Sbjct: 7 VLVLKDSLKRESGTKVHHANIQAAKAVADIIRTTLGPQSMLKMLLDAAGGIVVTNDGNCI 66
Query: 213 MKLLDIVHPAAKTLVDIAKSQDAEVGDGTTSVVILAGELL 332
++ LD+ HPAAK++++++++QD EVGDGTTSV++LAGE+L
Sbjct: 67 LRELDLAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEML 106
>02_02_0739 - 13560241-13560622,13561192-13561239,13563727-13564949
Length = 550
Score = 102 bits (244), Expect = 2e-22
Identities = 46/83 (55%), Positives = 64/83 (77%)
Frame = +3
Query: 90 NINACQLVVDAVRTTLGPRGMDKLIVDHSGKAVISNDGATIMKLLDIVHPAAKTLVDIAK 269
NI A + V DAVRT+LGPRGMDK+I + +I+NDGATI+ + ++ PAA+ L ++++
Sbjct: 31 NIAAARAVADAVRTSLGPRGMDKMISSGEQEVIITNDGATILSRMSLLQPAARMLAELSR 90
Query: 270 SQDAEVGDGTTSVVILAGELLKR 338
SQDA GDGTT+VV+LAG LL+R
Sbjct: 91 SQDAAAGDGTTTVVVLAGSLLRR 113
>05_07_0067 +
27463703-27463705,27464309-27464365,27464779-27464844,
27464985-27465096,27465281-27465409,27466076-27466191,
27466364-27466440,27466678-27467163,27467255-27467570,
27467618-27467797
Length = 513
Score = 101 bits (241), Expect = 6e-22
Identities = 52/101 (51%), Positives = 74/101 (73%), Gaps = 2/101 (1%)
Frame = +3
Query: 39 LLREGTDQTQGKPQLISNINACQLVVDAVRTTLGPRGMDKLIVDHS-GKAV-ISNDGATI 212
LL++ + +G+ +++ + D V+TTLGP+GMDK++ G++V ++NDGATI
Sbjct: 5 LLKDDATEEKGERARMASFVGGMAISDLVKTTLGPKGMDKILQSTGRGRSVTVTNDGATI 64
Query: 213 MKLLDIVHPAAKTLVDIAKSQDAEVGDGTTSVVILAGELLK 335
+K L I +PAAK LVDI+K QD EVGDGTTSVV+LAGELL+
Sbjct: 65 LKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLR 105
>03_05_0339 +
23287620-23287676,23287784-23287849,23287937-23288048,
23288240-23288368,23288795-23288866,23289245-23289360,
23289494-23289570,23289788-23290273,23290373-23290688,
23290769-23290915
Length = 525
Score = 99 bits (238), Expect = 1e-21
Identities = 51/101 (50%), Positives = 73/101 (72%), Gaps = 2/101 (1%)
Frame = +3
Query: 39 LLREGTDQTQGKPQLISNINACQLVVDAVRTTLGPRGMDKLIVDHS-GKAV-ISNDGATI 212
+L++ + +G+ ++ + D V+TTLGP+GMDK++ G++V ++NDGATI
Sbjct: 4 VLKDDAVEEKGERARMAAFIGAMAIADLVKTTLGPKGMDKILQSTGRGRSVTVTNDGATI 63
Query: 213 MKLLDIVHPAAKTLVDIAKSQDAEVGDGTTSVVILAGELLK 335
+K L I +PAAK LVDI+K QD EVGDGTTSVV+LAGELL+
Sbjct: 64 LKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLR 104
>10_08_0620 - 19321612-19323237
Length = 541
Score = 92.7 bits (220), Expect = 2e-19
Identities = 46/87 (52%), Positives = 62/87 (71%), Gaps = 4/87 (4%)
Frame = +3
Query: 90 NINACQLVVDAVRTTLGPRGMDKLIVDHSG----KAVISNDGATIMKLLDIVHPAAKTLV 257
NI A + V A RT+LGPRGMDK+I S +I+NDGATI+ + ++ PAA+ L
Sbjct: 31 NIAAGRAVAAAARTSLGPRGMDKMISSSSSGGDQAVIITNDGATILSRMPLLQPAARMLA 90
Query: 258 DIAKSQDAEVGDGTTSVVILAGELLKR 338
D+++SQDA GDGTT+VV+LAG LL+R
Sbjct: 91 DLSRSQDAAAGDGTTTVVVLAGSLLRR 117
>06_03_0477 -
21250811-21250981,21251261-21251374,21251447-21251613,
21252051-21252153,21252315-21252367,21252438-21252570,
21252835-21253183,21253685-21254003,21254519-21254717
Length = 535
Score = 90.6 bits (215), Expect = 8e-19
Identities = 44/102 (43%), Positives = 69/102 (67%)
Frame = +3
Query: 33 ILLLREGTDQTQGKPQLISNINACQLVVDAVRTTLGPRGMDKLIVDHSGKAVISNDGATI 212
IL +E + +G +NI A + V +RT+LGP+GMDK++ G I+NDGATI
Sbjct: 14 ILREQEKKSRLRGLDAQKANIAAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATI 73
Query: 213 MKLLDIVHPAAKTLVDIAKSQDAEVGDGTTSVVILAGELLKR 338
++ +D+ + AK +V+++ SQD E+GDGTT VV++AG LL++
Sbjct: 74 LEQMDVDNQIAKLMVELSCSQDYEIGDGTTGVVVMAGSLLEQ 115
>03_06_0362 +
33379489-33379624,33380161-33380423,33380524-33380670,
33380753-33380914,33381681-33381758,33382329-33382462,
33382702-33382774,33382852-33382929,33383002-33383124,
33383223-33383317,33383723-33383932,33384115-33384172,
33384268-33384333
Length = 540
Score = 90.2 bits (214), Expect = 1e-18
Identities = 41/101 (40%), Positives = 66/101 (65%), Gaps = 1/101 (0%)
Frame = +3
Query: 39 LLREGTDQTQGKPQ-LISNINACQLVVDAVRTTLGPRGMDKLIVDHSGKAVISNDGATIM 215
+L+EG G + ++ NI+AC+ + RT+LGP GM+K++++H K ++ND ATI+
Sbjct: 9 MLKEGHKHLSGLDEAVLKNIDACRELSAITRTSLGPNGMNKMVINHLDKLFVTNDAATIV 68
Query: 216 KLLDIVHPAAKTLVDIAKSQDAEVGDGTTSVVILAGELLKR 338
L++ HPAAK LV ++Q E+GDG + AGELL++
Sbjct: 69 NELEVQHPAAKILVLAGRAQQEEIGDGANLTISFAGELLEK 109
>04_04_0729 +
27612106-27612195,27612284-27612370,27612469-27612528,
27612554-27612688,27612769-27612864,27613149-27613214,
27613647-27613864,27614093-27614189,27614605-27614691,
27614892-27615026,27615121-27615225,27615717-27615845,
27615925-27616028,27616598-27616688,27616774-27616857
Length = 527
Score = 84.6 bits (200), Expect = 5e-17
Identities = 38/60 (63%), Positives = 50/60 (83%)
Frame = +3
Query: 159 LIVDHSGKAVISNDGATIMKLLDIVHPAAKTLVDIAKSQDAEVGDGTTSVVILAGELLKR 338
++VD G I+NDGATI+++L++ HPAAK LV++A+ QD EVGDGTTSVVI+A ELLKR
Sbjct: 1 MLVDDIGDVTITNDGATILRMLEVEHPAAKVLVELAELQDREVGDGTTSVVIIAAELLKR 60
Score = 42.3 bits (95), Expect = 3e-04
Identities = 27/60 (45%), Positives = 37/60 (61%)
Frame = +1
Query: 391 AVRTAAKLAVDKVKELAVKIDKKSPEEQRELLRKCAETAMSSQLIYRRKDHFSKMVVDAV 570
A+R A K +K LAVK+DK ++ L CA+T+MSS+LI D F+ +VVDAV
Sbjct: 109 AMREACKYVEEK---LAVKVDKLG----KDSLINCAKTSMSSKLINSDSDFFANLVVDAV 161
>05_01_0337 -
2658647-2658722,2658797-2658915,2658995-2659102,
2659187-2659255,2659561-2659655,2659740-2659944,
2660125-2660211,2660291-2660405,2660696-2660802,
2661054-2661146,2661243-2661290,2661345-2661544,
2661993-2662128,2662228-2662291,2662779-2662912
Length = 551
Score = 71.7 bits (168), Expect = 4e-13
Identities = 34/83 (40%), Positives = 53/83 (63%)
Frame = +3
Query: 90 NINACQLVVDAVRTTLGPRGMDKLIVDHSGKAVISNDGATIMKLLDIVHPAAKTLVDIAK 269
NINA + + D ++T LGP+G K++V +G ++ DG T++K + I +P A + A
Sbjct: 22 NINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAV 81
Query: 270 SQDAEVGDGTTSVVILAGELLKR 338
+QD GDGTTS V+ GEL+K+
Sbjct: 82 AQDDTSGDGTTSTVLFIGELMKQ 104
>12_01_1011 +
10292709-10292765,10293003-10293156,10294062-10294183,
10294288-10294495,10294644-10294789,10294920-10295226,
10295666-10296117,10296388-10296678
Length = 578
Score = 53.2 bits (122), Expect = 1e-07
Identities = 27/79 (34%), Positives = 46/79 (58%), Gaps = 4/79 (5%)
Frame = +3
Query: 111 VVDAVRTTLGPRGMDKLIVDHSGKAVISNDGATIMKLLDIVHP----AAKTLVDIAKSQD 278
+ +AV TLGPRG + +++D G + NDG TI + +++ P A + ++A +
Sbjct: 59 LANAVGVTLGPRGRN-VVLDEYGSPKVVNDGVTIARAIELYDPMENAGAALIREVASKTN 117
Query: 279 AEVGDGTTSVVILAGELLK 335
GDGTT+ +LA E++K
Sbjct: 118 DSAGDGTTTASVLAREIIK 136
>03_06_0760 -
36067752-36068045,36068260-36068711,36069263-36069569,
36069719-36069864,36069989-36070196,36070339-36070460,
36070621-36070789,36070875-36070931
Length = 584
Score = 53.2 bits (122), Expect = 1e-07
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 4/76 (5%)
Frame = +3
Query: 120 AVRTTLGPRGMDKLIVDHSGKAVISNDGATIMKLLDIVHP----AAKTLVDIAKSQDAEV 287
AV TLGPRG + +++D G + NDG TI + +++ P A + ++A +
Sbjct: 67 AVAVTLGPRGRN-VVLDEFGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSA 125
Query: 288 GDGTTSVVILAGELLK 335
GDGTT+ +LA E++K
Sbjct: 126 GDGTTTASVLAREIIK 141
>02_01_0024 +
159595-159801,159892-160017,160201-160338,160431-160526,
160958-161200,161249-161537,161612-161781,161975-162052,
162156-162227,162345-162449,162555-162647,162737-162829,
163109-163235,163317-163330
Length = 616
Score = 46.8 bits (106), Expect = 1e-05
Identities = 27/79 (34%), Positives = 40/79 (50%), Gaps = 4/79 (5%)
Frame = +3
Query: 96 NACQLVVDAVRTTLGPRGMDKLIVDHSGKAVISNDGATIMKLLDIVHP----AAKTLVDI 263
N + D V TLGP+G + ++ G I NDG T+ K +++ P AK +
Sbjct: 70 NGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVAKEVELEDPVENIGAKLVRQA 129
Query: 264 AKSQDAEVGDGTTSVVILA 320
A + GDGTT+ V+LA
Sbjct: 130 AAKTNDLAGDGTTTSVVLA 148
>06_01_0097 -
810283-810296,810398-810521,810974-811066,811144-811236,
811410-811514,811661-811732,811857-811934,812210-812379,
812507-812741,812832-813074,813243-813338,813445-813582,
814014-814139,814235-814453
Length = 601
Score = 44.8 bits (101), Expect = 5e-05
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 4/78 (5%)
Frame = +3
Query: 111 VVDAVRTTLGPRGMDKLIVDHSGKAVISNDGATIMKLLDIVHP----AAKTLVDIAKSQD 278
+ D V TLGP+G + ++ G I NDG T+ + +++ P AK + A +
Sbjct: 79 LADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREVELEDPVENIGAKLVRQAAAKTN 138
Query: 279 AEVGDGTTSVVILAGELL 332
GDGTT+ V+LA L+
Sbjct: 139 DLAGDGTTTSVVLAQGLI 156
>05_06_0240 -
26629218-26629323,26629412-26629490,26629656-26629761,
26629844-26629947,26630069-26630168,26630256-26630351,
26630464-26630541,26630603-26630671,26630766-26630846,
26630879-26630935,26631016-26631105,26631192-26631278,
26631690-26631794,26631899-26631994,26632222-26632397,
26632847-26633006,26633151-26633600
Length = 679
Score = 43.2 bits (97), Expect = 2e-04
Identities = 24/79 (30%), Positives = 45/79 (56%), Gaps = 5/79 (6%)
Frame = +3
Query: 111 VVDAVRTTLGPRGMDKLIVDHSGKA-VISNDGATIMKLLDIVHPA----AKTLVDIAKSQ 275
+ DAV+ T+GP+G + +I++ S +A ++ DG T+ K ++ A A + +A++
Sbjct: 139 LADAVKVTMGPKGRN-VIIERSHRAPKVTKDGVTVAKSIEFEDSAKNVGANLVKQVAEAT 197
Query: 276 DAEVGDGTTSVVILAGELL 332
+ GDGTT +L +L
Sbjct: 198 NKVAGDGTTCATVLTQAIL 216
>03_01_0305 -
2383187-2383298,2383606-2383684,2383762-2383867,
2383941-2384044,2384141-2384240,2384533-2384628,
2384724-2384801,2385355-2385423,2385511-2385591,
2385670-2385759,2385859-2385945,2386022-2386126,
2386591-2386686,2386796-2386971,2387225-2387384,
2387898-2388029,2388236-2388260,2389023-2389174
Length = 615
Score = 43.2 bits (97), Expect = 2e-04
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 4/73 (5%)
Frame = +3
Query: 111 VVDAVRTTLGPRGMDKLIVDHSGKAVISNDGATIMKLLD----IVHPAAKTLVDIAKSQD 278
+ DAV+ T+GP+G +I G ++ DG T+ K ++ + + A + +A + +
Sbjct: 92 LADAVKVTMGPKGRTVVIEQSFGAPKVTKDGVTVAKSIEFSNRVKNVGASLVKQVANATN 151
Query: 279 AEVGDGTTSVVIL 317
GDGTT +L
Sbjct: 152 DTAGDGTTCATVL 164
>09_06_0292 +
22075647-22075691,22077394-22077507,22077602-22077841,
22077926-22078003,22078094-22078162,22078420-22078545,
22079108-22079188,22079272-22079460,22079597-22080434,
22082290-22082411,22082482-22082701,22082910-22083055,
22083260-22083566,22083886-22084136,22084294-22084533,
22084930-22085238
Length = 1124
Score = 38.3 bits (85), Expect = 0.004
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 8/66 (12%)
Frame = +3
Query: 159 LIVDHSGKAVISNDGATIMKLLD----IVHPAAKTLVD----IAKSQDAEVGDGTTSVVI 314
+++D + NDG TI K ++ + H A L + IA ++ VGDGTT+ +I
Sbjct: 597 VVIDQDDVPKVINDGITIAKAIELPNAVEHAGAMLLQEHVNQIASKTNSSVGDGTTTAII 656
Query: 315 LAGELL 332
LA E++
Sbjct: 657 LAREII 662
>10_08_0289 +
16534063-16534100,16534219-16534243,16534847-16534978,
16535255-16535441,16536014-16536189,16536282-16536377,
16536511-16536615,16536654-16536683,16536698-16536784,
16536874-16536963,16537033-16537113,16537200-16537268,
16537413-16537490,16537578-16537673,16537981-16538080,
16538208-16538311,16538396-16538501,16538595-16538673,
16538861-16538963
Length = 593
Score = 33.5 bits (73), Expect = 0.13
Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 13/82 (15%)
Frame = +3
Query: 111 VVDAVRTTLGPR---------GMDKLIVDHSGKAVISNDGATIMKLLD----IVHPAAKT 251
+ DAV+ T+GP+ G + +I G ++ DG T+ K ++ + + A
Sbjct: 54 LADAVKVTMGPKIGLNVSIMQGRNVVIEQSYGSPKVTKDGVTVAKSIEFKDRVKNVGASL 113
Query: 252 LVDIAKSQDAEVGDGTTSVVIL 317
+ +A + + GDGTT +L
Sbjct: 114 VKQVANATNDTAGDGTTCATVL 135
>03_02_0118 - 5722988-5723329
Length = 113
Score = 33.5 bits (73), Expect = 0.13
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
Frame = -3
Query: 434 SLTLSTANLAAVRTARTITLGWTPCFQANGP--QSLQKFTS*DYNRCSTITDLSVLRFGN 261
++T T LAAV A + GW+P + P Q L ++ + NR S +L+ R
Sbjct: 2 AMTTRTLLLAAVCAAAALPRGWSPIKNIDDPHIQELGRWAITENNRVSPSDELTFHRVTG 61
Query: 260 VDQSFCSRMHYIQQLHDGS 204
+Q S M+Y ++ S
Sbjct: 62 GEQQVVSGMNYRLEIEAAS 80
>07_01_0595 -
4432642-4432926,4433062-4433769,4433964-4434164,
4434296-4435288
Length = 728
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +3
Query: 165 VDHSGKAVISNDGATIM-KLLDIVHPAAKTLVDIAKSQDAEVGDGTTSVVILAG 323
+ H + D A ++ +L D +HP T+ D+ DAE G+ ++ +L G
Sbjct: 45 IPHGHIEQCAEDPALLLSRLPDPIHPVPCTVADLVLDVDAESGEAYATISLLPG 98
>03_02_0651 +
10183050-10184167,10184350-10184974,10185023-10185208,
10185325-10185660
Length = 754
Score = 28.7 bits (61), Expect = 3.6
Identities = 20/88 (22%), Positives = 40/88 (45%), Gaps = 2/88 (2%)
Frame = +3
Query: 102 CQLVVDAVRTTLGPRG--MDKLIVDHSGKAVISNDGATIMKLLDIVHPAAKTLVDIAKSQ 275
C ++ +A L P G ++ I + +G+ + AT + D + P + V + +
Sbjct: 364 CNVIANAANWRLKPGGGGVNAAIYNAAGEDL---QRAT-KECADTLRPGSSVAVPLPSTS 419
Query: 276 DAEVGDGTTSVVILAGELLKRLRPVCLK 359
+G T ++ + G + +RP CLK
Sbjct: 420 PLHQREGVTHIIHVLGPNMNPMRPDCLK 447
>01_05_0687 + 24288648-24292746,24293737-24293844,24294333-24294442,
24295208-24295282
Length = 1463
Score = 28.3 bits (60), Expect = 4.8
Identities = 17/65 (26%), Positives = 30/65 (46%)
Frame = -3
Query: 266 GNVDQSFCSRMHYIQQLHDGSSII*NHCFAAMIHYQLVHAPWAKCCADSINNQLAGIDVR 87
G V + C M+Y+ + H+ + HC A ++ Y AP KC ++ +VR
Sbjct: 1387 GYVHCTCCQTMNYVLEAHEVGKVHCGHC-ATLLMYPF-GAPAVKCSLCLFVTEIGERNVR 1444
Query: 86 YKLRL 72
+L +
Sbjct: 1445 RRLSI 1449
>09_04_0105 - 14633097-14635529
Length = 810
Score = 27.5 bits (58), Expect = 8.4
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = -3
Query: 515 EDIAVSAHFLRSSLCSSGDFLSIFTANSLTLSTANLAAVRTARTI 381
+D VSA L + +G ++ +TA S+ L+ A ++ VR A I
Sbjct: 249 DDEPVSAMLLLREMVRNGVAINKYTATSILLACAQMSMVREASQI 293
>04_04_1136 -
31142742-31142806,31143245-31143325,31143432-31143588,
31143695-31143809,31144016-31144083,31144171-31144314,
31144393-31144470,31144555-31144637,31144729-31144768,
31144993-31145067,31145202-31145314,31145839-31145878,
31145977-31146128,31146351-31146405,31146717-31146776,
31147005-31147268,31148379-31148436,31148606-31148637
Length = 559
Score = 27.5 bits (58), Expect = 8.4
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +1
Query: 451 DKKSPEEQRELLRKCAETAMSSQLIYRRKDHFSKMVVDAVLSLD 582
D+ SPE+ RELL + E + + ++++ D FS + + SLD
Sbjct: 99 DELSPED-RELLVRDIEVSERGRTLHKKFDFFSPFLAGILPSLD 141
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,279,613
Number of Sequences: 37544
Number of extensions: 334426
Number of successful extensions: 866
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 836
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 856
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1388195172
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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