Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_J12
(589 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical... 170 5e-43
AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical... 170 5e-43
AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical ... 115 3e-26
Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical pr... 109 1e-24
U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein. 109 1e-24
Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical p... 105 2e-23
U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein. 105 2e-23
Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical pr... 103 1e-22
Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical pr... 103 1e-22
U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein. 103 1e-22
Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical p... 96 2e-20
U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein. 96 2e-20
AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical ... 96 2e-20
AC024827-1|AAF60806.2| 581|Caenorhabditis elegans Hypothetical ... 87 7e-18
U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin cont... 70 1e-12
U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin cont... 70 1e-12
AC084153-6|AAK84594.1| 568|Caenorhabditis elegans Heat shock pr... 58 6e-09
L36035-1|AAA28077.1| 568|Caenorhabditis elegans HSP60 protein. 56 2e-08
AF016676-4|AAG24104.1| 463|Caenorhabditis elegans Cytochrome p4... 29 1.9
Z82266-11|CAB05177.4| 1192|Caenorhabditis elegans Hypothetical p... 29 2.4
DQ360810-1|ABC88647.1| 1192|Caenorhabditis elegans intraflagella... 29 2.4
AF016676-3|AAG24101.2| 494|Caenorhabditis elegans Cytochrome p4... 29 3.2
Z82259-6|CAB97264.1| 339|Caenorhabditis elegans Hypothetical pr... 27 7.5
U49795-1|AAB03859.1| 673|Caenorhabditis elegans DNA-binding pro... 27 7.5
U49794-1|AAB03858.1| 673|Caenorhabditis elegans lag-1 protein. 27 7.5
AF100663-8|AAM98006.1| 671|Caenorhabditis elegans Lin-12 and gl... 27 7.5
AF100663-7|AAC68978.3| 673|Caenorhabditis elegans Lin-12 and gl... 27 7.5
AF016438-14|AAB65888.1| 493|Caenorhabditis elegans Cytochrome p... 27 7.5
Z70682-7|CAA94585.2| 531|Caenorhabditis elegans Hypothetical pr... 27 9.9
U88167-10|AAB42222.1| 804|Caenorhabditis elegans Hypothetical p... 27 9.9
>AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical
protein T10B5.5b protein.
Length = 455
Score = 170 bits (414), Expect = 5e-43
Identities = 78/109 (71%), Positives = 96/109 (88%)
Frame = +3
Query: 21 MQPQILLLREGTDQTQGKPQLISNINACQLVVDAVRTTLGPRGMDKLIVDHSGKAVISND 200
M+P I+LL++GT+ QGK Q+ISNINACQ+V D++RTTLGPRG+DKLIVD G ISND
Sbjct: 2 MRPPIILLKDGTENKQGKGQIISNINACQVVADSIRTTLGPRGLDKLIVDSKGATTISND 61
Query: 201 GATIMKLLDIVHPAAKTLVDIAKSQDAEVGDGTTSVVILAGELLKRLRP 347
GATI+KLLDIV PAA T+VDIA+SQDAEVGDGTTSVV+LA E+LK+++P
Sbjct: 62 GATILKLLDIVFPAASTMVDIARSQDAEVGDGTTSVVVLAAEILKQMKP 110
Score = 63.7 bits (148), Expect = 9e-11
Identities = 32/80 (40%), Positives = 55/80 (68%)
Frame = +1
Query: 346 PFA*KQGVHPRVIVRAVRTAAKLAVDKVKELAVKIDKKSPEEQRELLRKCAETAMSSQLI 525
PF + GVHP++++RA+ A + + + +L +KI+ ++ E RE+L KCA T +SS+L+
Sbjct: 110 PFI-EDGVHPQLLIRAIGKACEKTLKNLADLEIKINGET--ELREMLVKCAATTLSSKLV 166
Query: 526 YRRKDHFSKMVVDAVLSLDA 585
+ + F+ M+VDAV +LDA
Sbjct: 167 SQERLFFANMIVDAVNTLDA 186
>AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical
protein T10B5.5a protein.
Length = 535
Score = 170 bits (414), Expect = 5e-43
Identities = 78/109 (71%), Positives = 96/109 (88%)
Frame = +3
Query: 21 MQPQILLLREGTDQTQGKPQLISNINACQLVVDAVRTTLGPRGMDKLIVDHSGKAVISND 200
M+P I+LL++GT+ QGK Q+ISNINACQ+V D++RTTLGPRG+DKLIVD G ISND
Sbjct: 2 MRPPIILLKDGTENKQGKGQIISNINACQVVADSIRTTLGPRGLDKLIVDSKGATTISND 61
Query: 201 GATIMKLLDIVHPAAKTLVDIAKSQDAEVGDGTTSVVILAGELLKRLRP 347
GATI+KLLDIV PAA T+VDIA+SQDAEVGDGTTSVV+LA E+LK+++P
Sbjct: 62 GATILKLLDIVFPAASTMVDIARSQDAEVGDGTTSVVVLAAEILKQMKP 110
Score = 63.7 bits (148), Expect = 9e-11
Identities = 32/80 (40%), Positives = 55/80 (68%)
Frame = +1
Query: 346 PFA*KQGVHPRVIVRAVRTAAKLAVDKVKELAVKIDKKSPEEQRELLRKCAETAMSSQLI 525
PF + GVHP++++RA+ A + + + +L +KI+ ++ E RE+L KCA T +SS+L+
Sbjct: 110 PFI-EDGVHPQLLIRAIGKACEKTLKNLADLEIKINGET--ELREMLVKCAATTLSSKLV 166
Query: 526 YRRKDHFSKMVVDAVLSLDA 585
+ + F+ M+VDAV +LDA
Sbjct: 167 SQERLFFANMIVDAVNTLDA 186
>AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical
protein F54A3.3 protein.
Length = 543
Score = 115 bits (276), Expect = 3e-26
Identities = 50/103 (48%), Positives = 76/103 (73%)
Frame = +3
Query: 24 QPQILLLREGTDQTQGKPQLISNINACQLVVDAVRTTLGPRGMDKLIVDHSGKAVISNDG 203
Q I++L +GT + G I NINAC+ + D +RT+LGPR M K+++D G V++NDG
Sbjct: 6 QQPIIVLSQGTKRESGHQVQIGNINACKTIADVIRTSLGPRAMLKMLMDPMGGIVMTNDG 65
Query: 204 ATIMKLLDIVHPAAKTLVDIAKSQDAEVGDGTTSVVILAGELL 332
I++ + + HPAAK++++IA++QD E GDGTTSV+ILAGE++
Sbjct: 66 NAILREITVKHPAAKSMIEIARTQDEETGDGTTSVIILAGEVM 108
>Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical
protein K01C8.10 protein.
Length = 540
Score = 109 bits (263), Expect = 1e-24
Identities = 52/98 (53%), Positives = 72/98 (73%), Gaps = 2/98 (2%)
Frame = +3
Query: 45 REGTDQTQGKPQLI--SNINACQLVVDAVRTTLGPRGMDKLIVDHSGKAVISNDGATIMK 218
RE + + KP+ + SNI A + V DAVRT+LGPRGMDK+I +G I+NDGATI+
Sbjct: 19 RERNFKDKDKPESVRNSNIVAAKAVADAVRTSLGPRGMDKMIQSGNGDVTITNDGATILN 78
Query: 219 LLDIVHPAAKTLVDIAKSQDAEVGDGTTSVVILAGELL 332
+ ++HP AK LV+++K+QD E GDGTT+VV++AG LL
Sbjct: 79 QMSVIHPTAKMLVELSKAQDIEAGDGTTTVVVMAGALL 116
>U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein.
Length = 540
Score = 109 bits (263), Expect = 1e-24
Identities = 52/98 (53%), Positives = 72/98 (73%), Gaps = 2/98 (2%)
Frame = +3
Query: 45 REGTDQTQGKPQLI--SNINACQLVVDAVRTTLGPRGMDKLIVDHSGKAVISNDGATIMK 218
RE + + KP+ + SNI A + V DAVRT+LGPRGMDK+I +G I+NDGATI+
Sbjct: 19 RERNFKDKDKPESVRNSNIVAAKAVADAVRTSLGPRGMDKMIQSGNGDVTITNDGATILN 78
Query: 219 LLDIVHPAAKTLVDIAKSQDAEVGDGTTSVVILAGELL 332
+ ++HP AK LV+++K+QD E GDGTT+VV++AG LL
Sbjct: 79 QMSVIHPTAKMLVELSKAQDIEAGDGTTTVVVMAGALL 116
>Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical
protein T05C12.7 protein.
Length = 549
Score = 105 bits (253), Expect = 2e-23
Identities = 48/93 (51%), Positives = 69/93 (74%)
Frame = +3
Query: 60 QTQGKPQLISNINACQLVVDAVRTTLGPRGMDKLIVDHSGKAVISNDGATIMKLLDIVHP 239
+T G+ N+ A + + V+++LGP G+DK++VD G +++NDGATI+K L++ HP
Sbjct: 15 RTTGQGIRSQNVTAAVAIANIVKSSLGPVGLDKMLVDDVGDVIVTNDGATILKQLEVEHP 74
Query: 240 AAKTLVDIAKSQDAEVGDGTTSVVILAGELLKR 338
A K LV++A+ QD EVGDGTTSVVI+A ELLKR
Sbjct: 75 AGKVLVELAQLQDEEVGDGTTSVVIVAAELLKR 107
Score = 42.7 bits (96), Expect = 2e-04
Identities = 27/70 (38%), Positives = 37/70 (52%)
Frame = +1
Query: 358 KQGVHPRVIVRAVRTAAKLAVDKVKELAVKIDKKSPEEQRELLRKCAETAMSSQLIYRRK 537
KQ VHP I+ R A K AV + E I S R+ + A+T+MSS++I
Sbjct: 113 KQKVHPTTIINGYRLACKEAVKYISE---NISFTSDSIGRQSVVNAAKTSMSSKIIGPDA 169
Query: 538 DHFSKMVVDA 567
D F ++VVDA
Sbjct: 170 DFFGELVVDA 179
>U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein.
Length = 549
Score = 105 bits (253), Expect = 2e-23
Identities = 48/93 (51%), Positives = 69/93 (74%)
Frame = +3
Query: 60 QTQGKPQLISNINACQLVVDAVRTTLGPRGMDKLIVDHSGKAVISNDGATIMKLLDIVHP 239
+T G+ N+ A + + V+++LGP G+DK++VD G +++NDGATI+K L++ HP
Sbjct: 15 RTTGQGIRSQNVTAAVAIANIVKSSLGPVGLDKMLVDDVGDVIVTNDGATILKQLEVEHP 74
Query: 240 AAKTLVDIAKSQDAEVGDGTTSVVILAGELLKR 338
A K LV++A+ QD EVGDGTTSVVI+A ELLKR
Sbjct: 75 AGKVLVELAQLQDEEVGDGTTSVVIVAAELLKR 107
Score = 42.7 bits (96), Expect = 2e-04
Identities = 27/70 (38%), Positives = 37/70 (52%)
Frame = +1
Query: 358 KQGVHPRVIVRAVRTAAKLAVDKVKELAVKIDKKSPEEQRELLRKCAETAMSSQLIYRRK 537
KQ VHP I+ R A K AV + E I S R+ + A+T+MSS++I
Sbjct: 113 KQKVHPTTIINGYRLACKEAVKYISE---NISFTSDSIGRQSVVNAAKTSMSSKIIGPDA 169
Query: 538 DHFSKMVVDA 567
D F ++VVDA
Sbjct: 170 DFFGELVVDA 179
>Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 103 bits (246), Expect = 1e-22
Identities = 50/105 (47%), Positives = 74/105 (70%), Gaps = 1/105 (0%)
Frame = +3
Query: 24 QPQILLL-REGTDQTQGKPQLISNINACQLVVDAVRTTLGPRGMDKLIVDHSGKAVISND 200
QP I++ +E + G + S+I A + V + +RT+LGPRG+DK++V G I+ND
Sbjct: 15 QPFIVMREQENQKRITGVEAVKSHILAARAVANTLRTSLGPRGLDKMLVSPDGDVTITND 74
Query: 201 GATIMKLLDIVHPAAKTLVDIAKSQDAEVGDGTTSVVILAGELLK 335
GATIM+ +D+ H AK +V+++KSQD E+GDGTT VV+LAG LL+
Sbjct: 75 GATIMEKMDVQHHVAKLMVELSKSQDHEIGDGTTGVVVLAGALLE 119
Score = 43.2 bits (97), Expect = 1e-04
Identities = 25/73 (34%), Positives = 41/73 (56%)
Frame = +1
Query: 361 QGVHPRVIVRAVRTAAKLAVDKVKELAVKIDKKSPEEQRELLRKCAETAMSSQLIYRRKD 540
+G+HP I A K A++ + I K P E RE L + A+T++ S+++ R
Sbjct: 127 RGIHPIKIADGFDLACKKALETLDS----ISDKFPVENRERLVETAQTSLGSKIVNRSLR 182
Query: 541 HFSKMVVDAVLSL 579
F+++ VDAVLS+
Sbjct: 183 QFAEIAVDAVLSV 195
>Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 103 bits (246), Expect = 1e-22
Identities = 50/105 (47%), Positives = 74/105 (70%), Gaps = 1/105 (0%)
Frame = +3
Query: 24 QPQILLL-REGTDQTQGKPQLISNINACQLVVDAVRTTLGPRGMDKLIVDHSGKAVISND 200
QP I++ +E + G + S+I A + V + +RT+LGPRG+DK++V G I+ND
Sbjct: 15 QPFIVMREQENQKRITGVEAVKSHILAARAVANTLRTSLGPRGLDKMLVSPDGDVTITND 74
Query: 201 GATIMKLLDIVHPAAKTLVDIAKSQDAEVGDGTTSVVILAGELLK 335
GATIM+ +D+ H AK +V+++KSQD E+GDGTT VV+LAG LL+
Sbjct: 75 GATIMEKMDVQHHVAKLMVELSKSQDHEIGDGTTGVVVLAGALLE 119
Score = 43.2 bits (97), Expect = 1e-04
Identities = 25/73 (34%), Positives = 41/73 (56%)
Frame = +1
Query: 361 QGVHPRVIVRAVRTAAKLAVDKVKELAVKIDKKSPEEQRELLRKCAETAMSSQLIYRRKD 540
+G+HP I A K A++ + I K P E RE L + A+T++ S+++ R
Sbjct: 127 RGIHPIKIADGFDLACKKALETLDS----ISDKFPVENRERLVETAQTSLGSKIVNRSLR 182
Query: 541 HFSKMVVDAVLSL 579
F+++ VDAVLS+
Sbjct: 183 QFAEIAVDAVLSV 195
>U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein.
Length = 542
Score = 103 bits (246), Expect = 1e-22
Identities = 50/105 (47%), Positives = 74/105 (70%), Gaps = 1/105 (0%)
Frame = +3
Query: 24 QPQILLL-REGTDQTQGKPQLISNINACQLVVDAVRTTLGPRGMDKLIVDHSGKAVISND 200
QP I++ +E + G + S+I A + V + +RT+LGPRG+DK++V G I+ND
Sbjct: 15 QPFIVMREQENQKRITGVEAVKSHILAARAVANTLRTSLGPRGLDKMLVSPDGDVTITND 74
Query: 201 GATIMKLLDIVHPAAKTLVDIAKSQDAEVGDGTTSVVILAGELLK 335
GATIM+ +D+ H AK +V+++KSQD E+GDGTT VV+LAG LL+
Sbjct: 75 GATIMEKMDVQHHVAKLMVELSKSQDHEIGDGTTGVVVLAGALLE 119
Score = 43.2 bits (97), Expect = 1e-04
Identities = 25/73 (34%), Positives = 41/73 (56%)
Frame = +1
Query: 361 QGVHPRVIVRAVRTAAKLAVDKVKELAVKIDKKSPEEQRELLRKCAETAMSSQLIYRRKD 540
+G+HP I A K A++ + I K P E RE L + A+T++ S+++ R
Sbjct: 127 RGIHPIKIADGFDLACKKALETLDS----ISDKFPVENRERLVETAQTSLGSKIVNRSLR 182
Query: 541 HFSKMVVDAVLSL 579
F+++ VDAVLS+
Sbjct: 183 QFAEIAVDAVLSV 195
>Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 95.9 bits (228), Expect = 2e-20
Identities = 45/105 (42%), Positives = 73/105 (69%), Gaps = 4/105 (3%)
Frame = +3
Query: 33 ILLLREGTDQTQGKPQLISNINACQLVVDAVRTTLGPRGMDKLIV----DHSGKAVISND 200
+ +L++ + +G+ +S+ + D V++TLGP+GMDK+++ + +G ++ND
Sbjct: 4 VQILKDNAQEERGESARLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKVTND 63
Query: 201 GATIMKLLDIVHPAAKTLVDIAKSQDAEVGDGTTSVVILAGELLK 335
GATI+K + + +PAAK LVD++ +QD EVGDGTTSV +LA ELLK
Sbjct: 64 GATILKSIGVDNPAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLK 108
Score = 48.4 bits (110), Expect = 4e-06
Identities = 24/73 (32%), Positives = 45/73 (61%)
Frame = +1
Query: 361 QGVHPRVIVRAVRTAAKLAVDKVKELAVKIDKKSPEEQRELLRKCAETAMSSQLIYRRKD 540
Q +HP+ I+ R A +A + +K+ +++ S + R+ L K A T + S+++ + K+
Sbjct: 116 QRIHPQTIISGYRRALGIAQESLKKSSIE----SGDNIRDDLLKIARTTLGSKILSQHKE 171
Query: 541 HFSKMVVDAVLSL 579
HF+++ VDAVL L
Sbjct: 172 HFAQLAVDAVLRL 184
>U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein.
Length = 529
Score = 95.9 bits (228), Expect = 2e-20
Identities = 45/105 (42%), Positives = 73/105 (69%), Gaps = 4/105 (3%)
Frame = +3
Query: 33 ILLLREGTDQTQGKPQLISNINACQLVVDAVRTTLGPRGMDKLIV----DHSGKAVISND 200
+ +L++ + +G+ +S+ + D V++TLGP+GMDK+++ + +G ++ND
Sbjct: 4 VQILKDNAQEERGESARLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKVTND 63
Query: 201 GATIMKLLDIVHPAAKTLVDIAKSQDAEVGDGTTSVVILAGELLK 335
GATI+K + + +PAAK LVD++ +QD EVGDGTTSV +LA ELLK
Sbjct: 64 GATILKSIGVDNPAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLK 108
Score = 48.4 bits (110), Expect = 4e-06
Identities = 24/73 (32%), Positives = 45/73 (61%)
Frame = +1
Query: 361 QGVHPRVIVRAVRTAAKLAVDKVKELAVKIDKKSPEEQRELLRKCAETAMSSQLIYRRKD 540
Q +HP+ I+ R A +A + +K+ +++ S + R+ L K A T + S+++ + K+
Sbjct: 116 QRIHPQTIISGYRRALGIAQESLKKSSIE----SGDNIRDDLLKIARTTLGSKILSQHKE 171
Query: 541 HFSKMVVDAVLSL 579
HF+++ VDAVL L
Sbjct: 172 HFAQLAVDAVLRL 184
>AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 95.9 bits (228), Expect = 2e-20
Identities = 45/105 (42%), Positives = 73/105 (69%), Gaps = 4/105 (3%)
Frame = +3
Query: 33 ILLLREGTDQTQGKPQLISNINACQLVVDAVRTTLGPRGMDKLIV----DHSGKAVISND 200
+ +L++ + +G+ +S+ + D V++TLGP+GMDK+++ + +G ++ND
Sbjct: 4 VQILKDNAQEERGESARLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKVTND 63
Query: 201 GATIMKLLDIVHPAAKTLVDIAKSQDAEVGDGTTSVVILAGELLK 335
GATI+K + + +PAAK LVD++ +QD EVGDGTTSV +LA ELLK
Sbjct: 64 GATILKSIGVDNPAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLK 108
Score = 48.4 bits (110), Expect = 4e-06
Identities = 24/73 (32%), Positives = 45/73 (61%)
Frame = +1
Query: 361 QGVHPRVIVRAVRTAAKLAVDKVKELAVKIDKKSPEEQRELLRKCAETAMSSQLIYRRKD 540
Q +HP+ I+ R A +A + +K+ +++ S + R+ L K A T + S+++ + K+
Sbjct: 116 QRIHPQTIISGYRRALGIAQESLKKSSIE----SGDNIRDDLLKIARTTLGSKILSQHKE 171
Query: 541 HFSKMVVDAVLSL 579
HF+++ VDAVL L
Sbjct: 172 HFAQLAVDAVLRL 184
>AC024827-1|AAF60806.2| 581|Caenorhabditis elegans Hypothetical
protein Y55F3AR.3 protein.
Length = 581
Score = 87.4 bits (207), Expect = 7e-18
Identities = 38/99 (38%), Positives = 64/99 (64%), Gaps = 1/99 (1%)
Frame = +3
Query: 42 LREGTDQTQGKPQLIS-NINACQLVVDAVRTTLGPRGMDKLIVDHSGKAVISNDGATIMK 218
++EG +G + + NI AC + +R+ GP GM+K++++H K ++ND ATI+K
Sbjct: 14 MKEGAQHFKGTDEAVQRNIEACTELASQIRSAYGPNGMNKMVINHIEKLFVTNDAATILK 73
Query: 219 LLDIVHPAAKTLVDIAKSQDAEVGDGTTSVVILAGELLK 335
L+I HPAA+ ++ + Q+ ++GD T +VVILA LL+
Sbjct: 74 ELEIQHPAARIIIMATEMQEKQIGDNTNTVVILAAALLE 112
>U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform b protein.
Length = 429
Score = 70.1 bits (164), Expect = 1e-12
Identities = 33/90 (36%), Positives = 54/90 (60%)
Frame = +3
Query: 90 NINACQLVVDAVRTTLGPRGMDKLIVDHSGKAVISNDGATIMKLLDIVHPAAKTLVDIAK 269
NI+ + + D +R+ LGP+G K++V +G ++ DG ++ + I HP A + +
Sbjct: 23 NISGARGLQDVMRSNLGPKGTLKMLVSGAGDIKLTKDGNVLLHEMAIQHPTASMIAKAST 82
Query: 270 SQDAEVGDGTTSVVILAGELLKRLRPVCLK 359
+QD GDGTTS V+L GELLK+ + L+
Sbjct: 83 AQDDVTGDGTTSTVLLIGELLKQAESLVLE 112
Score = 45.2 bits (102), Expect = 3e-05
Identities = 26/73 (35%), Positives = 42/73 (57%)
Frame = +1
Query: 361 QGVHPRVIVRAVRTAAKLAVDKVKELAVKIDKKSPEEQRELLRKCAETAMSSQLIYRRKD 540
+G+HPR++ A K EL K K++P E R+LL + TA+ ++L + D
Sbjct: 112 EGLHPRIVTEGFEWANT----KTLELLEKFKKEAPVE-RDLLVEVCRTALRTKLHQKLAD 166
Query: 541 HFSKMVVDAVLSL 579
H ++ VVDAVL++
Sbjct: 167 HITECVVDAVLAI 179
>U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform a protein.
Length = 539
Score = 70.1 bits (164), Expect = 1e-12
Identities = 33/90 (36%), Positives = 54/90 (60%)
Frame = +3
Query: 90 NINACQLVVDAVRTTLGPRGMDKLIVDHSGKAVISNDGATIMKLLDIVHPAAKTLVDIAK 269
NI+ + + D +R+ LGP+G K++V +G ++ DG ++ + I HP A + +
Sbjct: 23 NISGARGLQDVMRSNLGPKGTLKMLVSGAGDIKLTKDGNVLLHEMAIQHPTASMIAKAST 82
Query: 270 SQDAEVGDGTTSVVILAGELLKRLRPVCLK 359
+QD GDGTTS V+L GELLK+ + L+
Sbjct: 83 AQDDVTGDGTTSTVLLIGELLKQAESLVLE 112
Score = 45.2 bits (102), Expect = 3e-05
Identities = 26/73 (35%), Positives = 42/73 (57%)
Frame = +1
Query: 361 QGVHPRVIVRAVRTAAKLAVDKVKELAVKIDKKSPEEQRELLRKCAETAMSSQLIYRRKD 540
+G+HPR++ A K EL K K++P E R+LL + TA+ ++L + D
Sbjct: 112 EGLHPRIVTEGFEWANT----KTLELLEKFKKEAPVE-RDLLVEVCRTALRTKLHQKLAD 166
Query: 541 HFSKMVVDAVLSL 579
H ++ VVDAVL++
Sbjct: 167 HITECVVDAVLAI 179
>AC084153-6|AAK84594.1| 568|Caenorhabditis elegans Heat shock
protein protein 60 protein.
Length = 568
Score = 57.6 bits (133), Expect = 6e-09
Identities = 31/94 (32%), Positives = 51/94 (54%), Gaps = 4/94 (4%)
Frame = +3
Query: 66 QGKPQLISNINACQLVVDAVRTTLGPRGMDKLIVDHSGKAVISNDGATIMKLLDI----V 233
+G+ ++ +N L+ DAV T+GP+G + +I G I+ DG T+ K +D+
Sbjct: 26 EGRQAMLVGVN---LLADAVSVTMGPKGRNVIIEQSWGSPKITKDGVTVAKSIDLKDKYQ 82
Query: 234 HPAAKTLVDIAKSQDAEVGDGTTSVVILAGELLK 335
+ AK + D+A + E GDGTT +LA + K
Sbjct: 83 NLGAKLIQDVANKANEEAGDGTTCATVLARAIAK 116
>L36035-1|AAA28077.1| 568|Caenorhabditis elegans HSP60 protein.
Length = 568
Score = 56.0 bits (129), Expect = 2e-08
Identities = 30/94 (31%), Positives = 50/94 (53%), Gaps = 4/94 (4%)
Frame = +3
Query: 66 QGKPQLISNINACQLVVDAVRTTLGPRGMDKLIVDHSGKAVISNDGATIMKLLDI----V 233
+G+ ++ +N L+ DAV T+GP+G + +I G I+ DG T+ K +D+
Sbjct: 26 EGRQAMLVGVN---LLADAVSVTMGPKGRNVIIEQSWGSPKITKDGVTVAKSIDLKDKYQ 82
Query: 234 HPAAKTLVDIAKSQDAEVGDGTTSVVILAGELLK 335
+ AK + D+A + E GDGTT +L + K
Sbjct: 83 NLGAKLIQDVANKANEEAGDGTTCATVLTRAIAK 116
>AF016676-4|AAG24104.1| 463|Caenorhabditis elegans Cytochrome p450
family protein 33C6 protein.
Length = 463
Score = 29.5 bits (63), Expect = 1.9
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = -3
Query: 410 LAAVRTARTITLGWTPCFQANGPQSLQK 327
LA V T T T+ WT C+ N P+ LQK
Sbjct: 300 LAGVSTTNT-TVNWTICYVLNHPEVLQK 326
>Z82266-11|CAB05177.4| 1192|Caenorhabditis elegans Hypothetical
protein F23B2.4 protein.
Length = 1192
Score = 29.1 bits (62), Expect = 2.4
Identities = 19/61 (31%), Positives = 26/61 (42%)
Frame = -3
Query: 575 DSTASTTILEK*SFRLYISWEDIAVSAHFLRSSLCSSGDFLSIFTANSLTLSTANLAAVR 396
D A+ T+L L W DIA L+ C S F ++ N +T N+ VR
Sbjct: 484 DINANRTVLASIEDTLVCKWSDIATGETLLQEPGCYSVVFNTV-NENLFAFTTNNMLHVR 542
Query: 395 T 393
T
Sbjct: 543 T 543
>DQ360810-1|ABC88647.1| 1192|Caenorhabditis elegans intraflagellar
transport protein protein.
Length = 1192
Score = 29.1 bits (62), Expect = 2.4
Identities = 19/61 (31%), Positives = 26/61 (42%)
Frame = -3
Query: 575 DSTASTTILEK*SFRLYISWEDIAVSAHFLRSSLCSSGDFLSIFTANSLTLSTANLAAVR 396
D A+ T+L L W DIA L+ C S F ++ N +T N+ VR
Sbjct: 484 DINANRTVLASIEDTLVCKWSDIATGETLLQEPGCYSVVFNTV-NENLFAFTTNNMLHVR 542
Query: 395 T 393
T
Sbjct: 543 T 543
>AF016676-3|AAG24101.2| 494|Caenorhabditis elegans Cytochrome p450
family protein 33C5 protein.
Length = 494
Score = 28.7 bits (61), Expect = 3.2
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = -3
Query: 410 LAAVRTARTITLGWTPCFQANGPQSLQK 327
LA V T T T+ WT C+ N P LQK
Sbjct: 300 LAGVSTTNT-TVNWTICYVLNHPDVLQK 326
>Z82259-6|CAB97264.1| 339|Caenorhabditis elegans Hypothetical
protein C28D4.7 protein.
Length = 339
Score = 27.5 bits (58), Expect = 7.5
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +2
Query: 95 QCLPTGC*CCPHNTWPKGHGQADSGS*RQSSDFK 196
QC+PT N W K HGQ D+G + S +K
Sbjct: 155 QCMPTSM-----NLWKKMHGQNDAGHIQNVSYYK 183
>U49795-1|AAB03859.1| 673|Caenorhabditis elegans DNA-binding
protein LAG-1 protein.
Length = 673
Score = 27.5 bits (58), Expect = 7.5
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = +1
Query: 409 KLAVDKVKELAVKIDKKSPEEQRELLRKCAETAMSSQLIYRRKDH 543
+L + KV + V +D EE L KCA + ++L+Y H
Sbjct: 468 RLRIRKVDKQQVILDASCSEEPVSQLHKCAFQMIDNELVYLCLSH 512
>U49794-1|AAB03858.1| 673|Caenorhabditis elegans lag-1 protein.
Length = 673
Score = 27.5 bits (58), Expect = 7.5
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = +1
Query: 409 KLAVDKVKELAVKIDKKSPEEQRELLRKCAETAMSSQLIYRRKDH 543
+L + KV + V +D EE L KCA + ++L+Y H
Sbjct: 468 RLRIRKVDKQQVILDASCSEEPVSQLHKCAFQMIDNELVYLCLSH 512
>AF100663-8|AAM98006.1| 671|Caenorhabditis elegans Lin-12 and glp-1
phenotype protein1, isoform b protein.
Length = 671
Score = 27.5 bits (58), Expect = 7.5
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = +1
Query: 409 KLAVDKVKELAVKIDKKSPEEQRELLRKCAETAMSSQLIYRRKDH 543
+L + KV + V +D EE L KCA + ++L+Y H
Sbjct: 466 RLRIRKVDKQQVILDASCSEEPVSQLHKCAFQMIDNELVYLCLSH 510
>AF100663-7|AAC68978.3| 673|Caenorhabditis elegans Lin-12 and glp-1
phenotype protein1, isoform a protein.
Length = 673
Score = 27.5 bits (58), Expect = 7.5
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = +1
Query: 409 KLAVDKVKELAVKIDKKSPEEQRELLRKCAETAMSSQLIYRRKDH 543
+L + KV + V +D EE L KCA + ++L+Y H
Sbjct: 468 RLRIRKVDKQQVILDASCSEEPVSQLHKCAFQMIDNELVYLCLSH 512
>AF016438-14|AAB65888.1| 493|Caenorhabditis elegans Cytochrome p450
family protein 33C4 protein.
Length = 493
Score = 27.5 bits (58), Expect = 7.5
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -3
Query: 410 LAAVRTARTITLGWTPCFQANGPQSLQK 327
LA + T T T+ WT C+ N P LQK
Sbjct: 300 LAGLSTTNT-TVNWTICYVLNHPDVLQK 326
>Z70682-7|CAA94585.2| 531|Caenorhabditis elegans Hypothetical
protein F08G5.5 protein.
Length = 531
Score = 27.1 bits (57), Expect = 9.9
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = -3
Query: 509 IAVSAHFLRSSLCSSGDFLSIFTANSLTLSTANLA 405
I + AHFL +S CS FL++F + S L+ LA
Sbjct: 11 IFLLAHFLTTSNCSRILFLNMFNSKSHALTMMPLA 45
>U88167-10|AAB42222.1| 804|Caenorhabditis elegans Hypothetical
protein D2092.1a protein.
Length = 804
Score = 27.1 bits (57), Expect = 9.9
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = +1
Query: 382 IVRAVRTAAKLAVDKVKELAVKIDKKSPEEQRELLRKCAETA 507
IVR + + + + K+K ++ + EE+ + +KCAETA
Sbjct: 9 IVRRINSTSSSSPTKLKYRSLSSTLVNDEEESDETQKCAETA 50
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,405,724
Number of Sequences: 27780
Number of extensions: 270929
Number of successful extensions: 751
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 702
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 744
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1237082886
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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