Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_J09
(609 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY071252-1|AAL48874.1| 299|Drosophila melanogaster RE29207p pro... 226 2e-59
AE014297-3131|AAF55977.1| 299|Drosophila melanogaster CG5382-PB... 226 2e-59
AY069261-1|AAL39406.1| 276|Drosophila melanogaster GM05688p pro... 75 8e-14
AY113376-1|AAM29381.1| 1053|Drosophila melanogaster LP10764p pro... 31 0.93
AF262977-1|AAF76150.1| 5233|Drosophila melanogaster highwire pro... 31 0.93
AE014298-2087|AAF48411.3| 5233|Drosophila melanogaster CG32592-P... 31 0.93
AY119074-1|AAM50934.1| 137|Drosophila melanogaster LP09251p pro... 31 1.6
AE014297-1274|AAF54619.1| 137|Drosophila melanogaster CG17721-P... 31 1.6
BT001574-1|AAN71329.1| 312|Drosophila melanogaster RE22765p pro... 29 3.8
AY060824-1|AAL28372.1| 319|Drosophila melanogaster GM01182p pro... 29 3.8
AE014297-370|AAN14328.1| 312|Drosophila melanogaster CG10981-PB... 29 3.8
AE014297-369|AAF51944.1| 319|Drosophila melanogaster CG10981-PA... 29 3.8
BT024228-1|ABC86290.1| 841|Drosophila melanogaster LD33620p pro... 29 5.0
AY118388-1|AAM48417.1| 528|Drosophila melanogaster RE35406p pro... 29 5.0
AF034571-1|AAC26488.1| 841|Drosophila melanogaster light protein. 29 5.0
AE014134-3625|EAL24548.1| 528|Drosophila melanogaster CG18028-P... 29 5.0
AE014134-3624|EAA46035.1| 804|Drosophila melanogaster CG18028-P... 29 5.0
AE014134-3623|EAA46034.1| 841|Drosophila melanogaster CG18028-P... 29 5.0
BT003306-1|AAO25066.1| 1102|Drosophila melanogaster GH08706p pro... 29 6.6
AE013599-1167|AAF58756.2| 1102|Drosophila melanogaster CG33144-P... 29 6.6
AE013599-399|AAM68891.2| 409|Drosophila melanogaster CG11112-PB... 29 6.6
S48157-1|AAB24152.1| 1490|Drosophila melanogaster DNA polymerase... 28 8.7
AY070529-1|AAL48000.1| 746|Drosophila melanogaster GM13460p pro... 28 8.7
AJ487856-1|CAD32253.1| 1830|Drosophila melanogaster hypothetical... 28 8.7
AE014297-3026|AAF55908.2| 1488|Drosophila melanogaster CG6349-PA... 28 8.7
>AY071252-1|AAL48874.1| 299|Drosophila melanogaster RE29207p
protein.
Length = 299
Score = 226 bits (552), Expect = 2e-59
Identities = 95/141 (67%), Positives = 110/141 (78%)
Frame = +3
Query: 117 MGLCKCPKRRVTNQFCFEHRVNVCENCMVANHPKCIIQSYLQWLQDSDYNPICEICTKPL 296
MGLCKCPKR VTNQFCFEHRVNVCE+CMV +HPKCI+QSYLQWL+DSDY C +C L
Sbjct: 1 MGLCKCPKRLVTNQFCFEHRVNVCEHCMVQSHPKCIVQSYLQWLRDSDYISNCTLCGTTL 60
Query: 297 AEEECIRLTCYHVFHWACAESRYRALPRTTAPAGYQCPSCATPVFPPPNLVSPVADVLKE 476
+ +C+RL CYHVFHW C +R ALP TAP G+QCP+C+ +FP NLVSPVAD LK
Sbjct: 61 EQGDCVRLVCYHVFHWDCLNARQAALPANTAPRGHQCPACSVEIFPNANLVSPVADALKS 120
Query: 477 KLAGVNWARAGLGLPLLSEDQ 539
L+ VNW R GLGL LLSE+Q
Sbjct: 121 FLSQVNWGRNGLGLALLSEEQ 141
>AE014297-3131|AAF55977.1| 299|Drosophila melanogaster CG5382-PB
protein.
Length = 299
Score = 226 bits (552), Expect = 2e-59
Identities = 95/141 (67%), Positives = 110/141 (78%)
Frame = +3
Query: 117 MGLCKCPKRRVTNQFCFEHRVNVCENCMVANHPKCIIQSYLQWLQDSDYNPICEICTKPL 296
MGLCKCPKR VTNQFCFEHRVNVCE+CMV +HPKCI+QSYLQWL+DSDY C +C L
Sbjct: 1 MGLCKCPKRLVTNQFCFEHRVNVCEHCMVQSHPKCIVQSYLQWLRDSDYISNCTLCGTTL 60
Query: 297 AEEECIRLTCYHVFHWACAESRYRALPRTTAPAGYQCPSCATPVFPPPNLVSPVADVLKE 476
+ +C+RL CYHVFHW C +R ALP TAP G+QCP+C+ +FP NLVSPVAD LK
Sbjct: 61 EQGDCVRLVCYHVFHWDCLNARQAALPANTAPRGHQCPACSVEIFPNANLVSPVADALKS 120
Query: 477 KLAGVNWARAGLGLPLLSEDQ 539
L+ VNW R GLGL LLSE+Q
Sbjct: 121 FLSQVNWGRNGLGLALLSEEQ 141
>AY069261-1|AAL39406.1| 276|Drosophila melanogaster GM05688p
protein.
Length = 276
Score = 74.9 bits (176), Expect = 8e-14
Identities = 32/51 (62%), Positives = 40/51 (78%)
Frame = +3
Query: 387 APAGYQCPSCATPVFPPPNLVSPVADVLKEKLAGVNWARAGLGLPLLSEDQ 539
+P+G+QCP+C+ +FP NLVSPVAD LK L+ VNW R GLGL LLSE+Q
Sbjct: 68 SPSGHQCPACSVEIFPNANLVSPVADALKSFLSQVNWGRNGLGLALLSEEQ 118
>AY113376-1|AAM29381.1| 1053|Drosophila melanogaster LP10764p
protein.
Length = 1053
Score = 31.5 bits (68), Expect = 0.93
Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 6/66 (9%)
Frame = +3
Query: 258 DYNPICEIC-TKPLAEEECIRLTCYHVFHWACA----ESRYRALPRTTAPAGYQ-CPSCA 419
D + +C IC + L+ I L C HVFH+ C E R+ PR T G+ CP C
Sbjct: 806 DADDMCMICFVEALSCAPSIHLECGHVFHYHCCKAVLEKRWSG-PRIT--FGFSLCPICK 862
Query: 420 TPVFPP 437
+ P
Sbjct: 863 ADIQHP 868
>AF262977-1|AAF76150.1| 5233|Drosophila melanogaster highwire protein.
Length = 5233
Score = 31.5 bits (68), Expect = 0.93
Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 6/66 (9%)
Frame = +3
Query: 258 DYNPICEIC-TKPLAEEECIRLTCYHVFHWACA----ESRYRALPRTTAPAGYQ-CPSCA 419
D + +C IC + L+ I L C HVFH+ C E R+ PR T G+ CP C
Sbjct: 4986 DADDMCMICFVEALSCAPSIHLECGHVFHYHCCKAVLEKRWSG-PRIT--FGFSLCPICK 5042
Query: 420 TPVFPP 437
+ P
Sbjct: 5043 ADIQHP 5048
>AE014298-2087|AAF48411.3| 5233|Drosophila melanogaster CG32592-PA
protein.
Length = 5233
Score = 31.5 bits (68), Expect = 0.93
Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 6/66 (9%)
Frame = +3
Query: 258 DYNPICEIC-TKPLAEEECIRLTCYHVFHWACA----ESRYRALPRTTAPAGYQ-CPSCA 419
D + +C IC + L+ I L C HVFH+ C E R+ PR T G+ CP C
Sbjct: 4986 DADDMCMICFVEALSCAPSIHLECGHVFHYHCCKAVLEKRWSG-PRIT--FGFSLCPICK 5042
Query: 420 TPVFPP 437
+ P
Sbjct: 5043 ADIQHP 5048
>AY119074-1|AAM50934.1| 137|Drosophila melanogaster LP09251p
protein.
Length = 137
Score = 30.7 bits (66), Expect = 1.6
Identities = 21/79 (26%), Positives = 31/79 (39%)
Frame = +3
Query: 180 NVCENCMVANHPKCIIQSYLQWLQDSDYNPICEICTKPLAEEECIRLTCYHVFHWACAES 359
N+C +H KC+ + + + +C IC PL+ + L C H H C
Sbjct: 62 NLCYLVFRYSHRKCLECDKV--VNVNIAGDLCTICLDPLSVYTMVYLRCSHALHEKC--- 116
Query: 360 RYRALPRTTAPAGYQCPSC 416
L + A G CP C
Sbjct: 117 ----LHQYQANGGRHCPVC 131
>AE014297-1274|AAF54619.1| 137|Drosophila melanogaster CG17721-PA
protein.
Length = 137
Score = 30.7 bits (66), Expect = 1.6
Identities = 21/79 (26%), Positives = 31/79 (39%)
Frame = +3
Query: 180 NVCENCMVANHPKCIIQSYLQWLQDSDYNPICEICTKPLAEEECIRLTCYHVFHWACAES 359
N+C +H KC+ + + + +C IC PL+ + L C H H C
Sbjct: 62 NLCYLVFRYSHRKCLECDKV--VNVNIAGDLCTICLDPLSVYTMVYLRCSHALHEKC--- 116
Query: 360 RYRALPRTTAPAGYQCPSC 416
L + A G CP C
Sbjct: 117 ----LHQYQANGGRHCPVC 131
>BT001574-1|AAN71329.1| 312|Drosophila melanogaster RE22765p
protein.
Length = 312
Score = 29.5 bits (63), Expect = 3.8
Identities = 17/57 (29%), Positives = 28/57 (49%)
Frame = +3
Query: 201 VANHPKCIIQSYLQWLQDSDYNPICEICTKPLAEEECIRLTCYHVFHWACAESRYRA 371
VA+ PK + + + ++ Y C IC +++ E + C HVF C E+ RA
Sbjct: 237 VASPPKRVNRDIDESQKEELYK--CPICMDSVSKREPVSTKCGHVFCRECIETAIRA 291
>AY060824-1|AAL28372.1| 319|Drosophila melanogaster GM01182p
protein.
Length = 319
Score = 29.5 bits (63), Expect = 3.8
Identities = 17/57 (29%), Positives = 28/57 (49%)
Frame = +3
Query: 201 VANHPKCIIQSYLQWLQDSDYNPICEICTKPLAEEECIRLTCYHVFHWACAESRYRA 371
VA+ PK + + + ++ Y C IC +++ E + C HVF C E+ RA
Sbjct: 244 VASPPKRVNRDIDESQKEELYK--CPICMDSVSKREPVSTKCGHVFCRECIETAIRA 298
>AE014297-370|AAN14328.1| 312|Drosophila melanogaster CG10981-PB,
isoform B protein.
Length = 312
Score = 29.5 bits (63), Expect = 3.8
Identities = 17/57 (29%), Positives = 28/57 (49%)
Frame = +3
Query: 201 VANHPKCIIQSYLQWLQDSDYNPICEICTKPLAEEECIRLTCYHVFHWACAESRYRA 371
VA+ PK + + + ++ Y C IC +++ E + C HVF C E+ RA
Sbjct: 237 VASPPKRVNRDIDESQKEELYK--CPICMDSVSKREPVSTKCGHVFCRECIETAIRA 291
>AE014297-369|AAF51944.1| 319|Drosophila melanogaster CG10981-PA,
isoform A protein.
Length = 319
Score = 29.5 bits (63), Expect = 3.8
Identities = 17/57 (29%), Positives = 28/57 (49%)
Frame = +3
Query: 201 VANHPKCIIQSYLQWLQDSDYNPICEICTKPLAEEECIRLTCYHVFHWACAESRYRA 371
VA+ PK + + + ++ Y C IC +++ E + C HVF C E+ RA
Sbjct: 244 VASPPKRVNRDIDESQKEELYK--CPICMDSVSKREPVSTKCGHVFCRECIETAIRA 298
>BT024228-1|ABC86290.1| 841|Drosophila melanogaster LD33620p
protein.
Length = 841
Score = 29.1 bits (62), Expect = 5.0
Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 5/41 (12%)
Frame = +3
Query: 249 QDSDYNPICEICTKPL----AEEECI-RLTCYHVFHWACAE 356
Q Y +C +C +P+ CI RL C HV+H C +
Sbjct: 782 QQVSYEQLCSLCHRPVLMAGTHLYCIIRLECGHVYHKPCIQ 822
>AY118388-1|AAM48417.1| 528|Drosophila melanogaster RE35406p
protein.
Length = 528
Score = 29.1 bits (62), Expect = 5.0
Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 5/41 (12%)
Frame = +3
Query: 249 QDSDYNPICEICTKPL----AEEECI-RLTCYHVFHWACAE 356
Q Y +C +C +P+ CI RL C HV+H C +
Sbjct: 469 QQVSYEQLCSLCHRPVLMAGTHLYCIIRLECGHVYHKPCIQ 509
>AF034571-1|AAC26488.1| 841|Drosophila melanogaster light protein.
Length = 841
Score = 29.1 bits (62), Expect = 5.0
Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 5/41 (12%)
Frame = +3
Query: 249 QDSDYNPICEICTKPL----AEEECI-RLTCYHVFHWACAE 356
Q Y +C +C +P+ CI RL C HV+H C +
Sbjct: 782 QQVSYEQLCSLCHRPVLMAGTHLYCIIRLECGHVYHKPCIQ 822
>AE014134-3625|EAL24548.1| 528|Drosophila melanogaster CG18028-PC,
isoform C protein.
Length = 528
Score = 29.1 bits (62), Expect = 5.0
Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 5/41 (12%)
Frame = +3
Query: 249 QDSDYNPICEICTKPL----AEEECI-RLTCYHVFHWACAE 356
Q Y +C +C +P+ CI RL C HV+H C +
Sbjct: 469 QQVSYEQLCSLCHRPVLMAGTHLYCIIRLECGHVYHKPCIQ 509
>AE014134-3624|EAA46035.1| 804|Drosophila melanogaster CG18028-PB,
isoform B protein.
Length = 804
Score = 29.1 bits (62), Expect = 5.0
Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 5/41 (12%)
Frame = +3
Query: 249 QDSDYNPICEICTKPL----AEEECI-RLTCYHVFHWACAE 356
Q Y +C +C +P+ CI RL C HV+H C +
Sbjct: 745 QQVSYEQLCSLCHRPVLMAGTHLYCIIRLECGHVYHKPCIQ 785
>AE014134-3623|EAA46034.1| 841|Drosophila melanogaster CG18028-PA,
isoform A protein.
Length = 841
Score = 29.1 bits (62), Expect = 5.0
Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 5/41 (12%)
Frame = +3
Query: 249 QDSDYNPICEICTKPL----AEEECI-RLTCYHVFHWACAE 356
Q Y +C +C +P+ CI RL C HV+H C +
Sbjct: 782 QQVSYEQLCSLCHRPVLMAGTHLYCIIRLECGHVYHKPCIQ 822
>BT003306-1|AAO25066.1| 1102|Drosophila melanogaster GH08706p protein.
Length = 1102
Score = 28.7 bits (61), Expect = 6.6
Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 4/40 (10%)
Frame = +3
Query: 252 DSDYNPICEICTKPLAEEE-CIRLTCY---HVFHWACAES 359
D++ C +C P+ ++E C ++ C HVF W C S
Sbjct: 976 DNELIKCCPMCAVPIEKDEGCAQMMCKRCKHVFCWYCLAS 1015
>AE013599-1167|AAF58756.2| 1102|Drosophila melanogaster CG33144-PA
protein.
Length = 1102
Score = 28.7 bits (61), Expect = 6.6
Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 4/40 (10%)
Frame = +3
Query: 252 DSDYNPICEICTKPLAEEE-CIRLTCY---HVFHWACAES 359
D++ C +C P+ ++E C ++ C HVF W C S
Sbjct: 976 DNELIKCCPMCAVPIEKDEGCAQMMCKRCKHVFCWYCLAS 1015
>AE013599-399|AAM68891.2| 409|Drosophila melanogaster CG11112-PB,
isoform B protein.
Length = 409
Score = 28.7 bits (61), Expect = 6.6
Identities = 21/61 (34%), Positives = 25/61 (40%), Gaps = 1/61 (1%)
Frame = +3
Query: 267 PICEICTKPLAEEECIRLTCYHVFHWACAESRYRALPRTTAPAGYQCPS-CATPVFPPPN 443
P C C P + +C+ CY C E LP T P CPS C P+ P N
Sbjct: 303 PYCYPCRSPHCDSKCVPPDCYP----PCKEPGC-TLPPTCWPP--YCPSPCTPPMCIPGN 355
Query: 444 L 446
L
Sbjct: 356 L 356
>S48157-1|AAB24152.1| 1490|Drosophila melanogaster DNA
polymerase-primase 180 kdasubunit protein.
Length = 1490
Score = 28.3 bits (60), Expect = 8.7
Identities = 15/71 (21%), Positives = 28/71 (39%), Gaps = 5/71 (7%)
Frame = +3
Query: 189 ENCMVANHPKCIIQSYLQWLQDSDYNPICEIC-----TKPLAEEECIRLTCYHVFHWACA 353
+N +V +HP C + L+ + P+C+ C + E + CY F +
Sbjct: 1359 KNWLVCDHPDCNFNTRTHSLRKKSHRPLCQKCRSGTLLRQYTERDLYNQLCYLRFMFDLG 1418
Query: 354 ESRYRALPRTT 386
+ + P T
Sbjct: 1419 KQTLQQKPTLT 1429
>AY070529-1|AAL48000.1| 746|Drosophila melanogaster GM13460p
protein.
Length = 746
Score = 28.3 bits (60), Expect = 8.7
Identities = 15/71 (21%), Positives = 28/71 (39%), Gaps = 5/71 (7%)
Frame = +3
Query: 189 ENCMVANHPKCIIQSYLQWLQDSDYNPICEIC-----TKPLAEEECIRLTCYHVFHWACA 353
+N +V +HP C + L+ + P+C+ C + E + CY F +
Sbjct: 615 KNWLVCDHPDCNFNTRTHSLRKKSHRPLCQKCRSGSLLRQYTERDLYNQLCYLRFMFDLG 674
Query: 354 ESRYRALPRTT 386
+ + P T
Sbjct: 675 KQTLQQKPTLT 685
>AJ487856-1|CAD32253.1| 1830|Drosophila melanogaster hypothetical
protein protein.
Length = 1830
Score = 28.3 bits (60), Expect = 8.7
Identities = 37/158 (23%), Positives = 59/158 (37%), Gaps = 5/158 (3%)
Frame = +3
Query: 135 PKRRVTNQFCFEHRVNVCENCMVANHPKCIIQSYLQWLQD--SDYNPICEICTKPLAEEE 308
PKR + + + C+ C NHP + +LQ D S Y ++C A
Sbjct: 413 PKRLQSFETKVSTKQKGCDICSKENHPVRLCPRFLQMSVDSRSGYIKKKQLCLNCFARGH 472
Query: 309 CIRLTCYHVFHWACAESRYRALPRTTAPAGYQCPSCATPVFPPPNLVSPVADVLKEKLAG 488
+R C + + R+ L + P S +P P L P + +
Sbjct: 473 QLR-DCTSMHSCFTCKGRHHTLLHRSPPNSENASSSTSP--PTQQLPRPSSRNASASTSA 529
Query: 489 V-NWARAGLGLPLLSEDQ-DM-KSAVNRRSQSPIDQSS 593
V N+ +G LLS D+ N R+++ ID S
Sbjct: 530 VQNFFASGTSAVLLSTAMIDVCHLGTNYRARALIDSGS 567
>AE014297-3026|AAF55908.2| 1488|Drosophila melanogaster CG6349-PA
protein.
Length = 1488
Score = 28.3 bits (60), Expect = 8.7
Identities = 15/71 (21%), Positives = 28/71 (39%), Gaps = 5/71 (7%)
Frame = +3
Query: 189 ENCMVANHPKCIIQSYLQWLQDSDYNPICEIC-----TKPLAEEECIRLTCYHVFHWACA 353
+N +V +HP C + L+ + P+C+ C + E + CY F +
Sbjct: 1357 KNWLVCDHPDCNFNTRTHSLRKKSHRPLCQKCRSGSLLRQYTERDLYNQLCYLRFMFDLG 1416
Query: 354 ESRYRALPRTT 386
+ + P T
Sbjct: 1417 KQTLQQKPTLT 1427
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,447,380
Number of Sequences: 53049
Number of extensions: 557096
Number of successful extensions: 1713
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1616
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1713
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2503659279
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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