Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_J09
(609 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006768-2|AAF60574.1| 309|Caenorhabditis elegans Hypothetical ... 201 3e-52
AC006768-3|AAK70665.1| 246|Caenorhabditis elegans Hypothetical ... 83 2e-16
U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of pr... 40 0.001
U00044-6|AAA50679.2| 670|Caenorhabditis elegans Bard homolog (t... 38 0.004
U10402-5|AAA19066.2| 650|Caenorhabditis elegans Tryptophanyl (w... 32 0.28
U13644-5|AAB52681.1| 451|Caenorhabditis elegans Hypothetical pr... 31 0.49
AF067622-3|ABD63225.1| 447|Caenorhabditis elegans Hypothetical ... 31 0.49
L07144-6|AAK21443.1| 834|Caenorhabditis elegans Temporarily ass... 30 1.1
L07144-5|AAU20841.1| 837|Caenorhabditis elegans Temporarily ass... 30 1.1
Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical p... 29 2.0
AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical ... 29 2.0
AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha... 29 2.0
Z82080-4|CAC70117.1| 1125|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z81515-10|CAH60782.1| 413|Caenorhabditis elegans Hypothetical p... 29 2.6
Z81515-9|CAH04722.1| 2266|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z81515-8|CAB54234.3| 692|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z81515-7|CAB04195.1| 510|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z81515-6|CAB04198.1| 405|Caenorhabditis elegans Hypothetical pr... 29 2.6
AL031620-4|CAA20925.1| 456|Caenorhabditis elegans Hypothetical ... 29 2.6
AC006629-1|AAK18925.1| 330|Caenorhabditis elegans Hypothetical ... 29 2.6
Z81143-1|CAB03513.1| 381|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z46242-13|CAA86328.1| 135|Caenorhabditis elegans Hypothetical p... 29 3.4
U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical pr... 29 3.4
AF101310-1|AAC69216.2| 765|Caenorhabditis elegans Hypothetical ... 29 3.4
Z72511-3|CAA96657.1| 610|Caenorhabditis elegans Hypothetical pr... 28 4.5
AC024809-5|AAF59544.3| 287|Caenorhabditis elegans Hypothetical ... 28 6.0
Z82062-2|CAB04890.1| 489|Caenorhabditis elegans Hypothetical pr... 27 7.9
AL132862-5|CAB70227.1| 419|Caenorhabditis elegans Hypothetical ... 27 7.9
AL132862-4|CAB60533.1| 420|Caenorhabditis elegans Hypothetical ... 27 7.9
AL117195-28|CAB55014.1| 458|Caenorhabditis elegans Hypothetical... 27 7.9
>AC006768-2|AAF60574.1| 309|Caenorhabditis elegans Hypothetical
protein Y45G12B.2a protein.
Length = 309
Score = 201 bits (491), Expect = 3e-52
Identities = 84/139 (60%), Positives = 100/139 (71%)
Frame = +3
Query: 117 MGLCKCPKRRVTNQFCFEHRVNVCENCMVANHPKCIIQSYLQWLQDSDYNPICEICTKPL 296
MGLCKCPKR+VTN FC+EHRVNVCE C+V NHP C++QSYL WL D DY+P C +C L
Sbjct: 1 MGLCKCPKRKVTNLFCYEHRVNVCEFCLVDNHPNCVVQSYLTWLTDQDYDPNCSLCKTTL 60
Query: 297 AEEECIRLTCYHVFHWACAESRYRALPRTTAPAGYQCPSCATPVFPPPNLVSPVADVLKE 476
AE + IRL C H+ HW C + P TTAPAGY+CP C+ VFPP N VSP+ + L+E
Sbjct: 61 AEGDTIRLNCLHLLHWKCFDEWAANFPATTAPAGYRCPCCSQEVFPPINEVSPLIEKLRE 120
Query: 477 KLAGVNWARAGLGLPLLSE 533
+L NWARA LGLP L E
Sbjct: 121 QLKQSNWARAALGLPTLPE 139
>AC006768-3|AAK70665.1| 246|Caenorhabditis elegans Hypothetical
protein Y45G12B.2b protein.
Length = 246
Score = 83.0 bits (196), Expect = 2e-16
Identities = 36/67 (53%), Positives = 44/67 (65%)
Frame = +3
Query: 333 VFHWACAESRYRALPRTTAPAGYQCPSCATPVFPPPNLVSPVADVLKEKLAGVNWARAGL 512
+ HW C + P TTAPAGY+CP C+ VFPP N VSP+ + L+E+L NWARA L
Sbjct: 10 LLHWKCFDEWAANFPATTAPAGYRCPCCSQEVFPPINEVSPLIEKLREQLKQSNWARAAL 69
Query: 513 GLPLLSE 533
GLP L E
Sbjct: 70 GLPTLPE 76
>U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of
presynaptic morphologyprotein 1 protein.
Length = 3766
Score = 40.3 bits (90), Expect = 0.001
Identities = 27/80 (33%), Positives = 39/80 (48%), Gaps = 7/80 (8%)
Frame = +3
Query: 258 DYNPICEIC-TKPLAEEECIRLTCYHVFHWACA----ESRYRALPRTTAPAGYQCPSCAT 422
D + +C IC T+ L CIRL C H+FH+ C E R+ PR QCP C
Sbjct: 3512 DGDDVCVICFTERLGAAPCIRLGCGHMFHFHCVRMILERRWNG-PRIVF-RFMQCPLCIQ 3569
Query: 423 PVFPP--PNLVSPVADVLKE 476
P+ +L+ P+ + +E
Sbjct: 3570 PIEHSGLQDLIEPLKTIRQE 3589
>U00044-6|AAA50679.2| 670|Caenorhabditis elegans Bard homolog
(tumor suppressorgene bard1) protein 1 protein.
Length = 670
Score = 38.3 bits (85), Expect = 0.004
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +3
Query: 273 CEICTKPLAEEECIRLTCYHVFHWAC-AESRYRALPRTTAPAGYQCPSCATPV 428
C C KP + + + +C H + W C A + + + ++ A + CPSCA P+
Sbjct: 18 CVKCKKPRGDLQYLGSSCKHAYCWECIATFQQKPSGKRSSVARHMCPSCAFPL 70
>U10402-5|AAA19066.2| 650|Caenorhabditis elegans Tryptophanyl (w)
trna synthetaseprotein 2, isoform a protein.
Length = 650
Score = 32.3 bits (70), Expect = 0.28
Identities = 18/60 (30%), Positives = 25/60 (41%), Gaps = 2/60 (3%)
Frame = +3
Query: 273 CEICTKPLAEEECIRLTCYHVFHWACAESRYRALPRTTAPAGYQCPSCATPVFP--PPNL 446
C IC L + L C H+F W C + A + + + +CP C P P NL
Sbjct: 255 CSIC---LENKNPSALFCGHLFCWTCIQEHAVAATSSASTSSARCPQCRLEFQPRDPNNL 311
>U13644-5|AAB52681.1| 451|Caenorhabditis elegans Hypothetical
protein F56D2.2 protein.
Length = 451
Score = 31.5 bits (68), Expect = 0.49
Identities = 14/46 (30%), Positives = 19/46 (41%), Gaps = 1/46 (2%)
Frame = +3
Query: 273 CEICTKPLAEEECIRLT-CYHVFHWACAESRYRALPRTTAPAGYQC 407
CE+C + CI+ C HVF C YR + + QC
Sbjct: 186 CEVCYDSQMGQHCIKFQPCSHVFCKQCTFDYYRTISKGVVSKAMQC 231
>AF067622-3|ABD63225.1| 447|Caenorhabditis elegans Hypothetical
protein F33E11.6b protein.
Length = 447
Score = 31.5 bits (68), Expect = 0.49
Identities = 19/62 (30%), Positives = 24/62 (38%), Gaps = 7/62 (11%)
Frame = +3
Query: 186 CENCMVANHPKCIIQSYLQWLQDSDYN------PICEICTKPLAEEECIRL-TCYHVFHW 344
C C +A HP+CI Y +C IC KP E+E + C FH
Sbjct: 348 CATCKIAYHPQCIEMPERMAALVKTYEWSCVDCRLCSICNKPEKEDEIVFCDRCDRGFHT 407
Query: 345 AC 350
C
Sbjct: 408 YC 409
>L07144-6|AAK21443.1| 834|Caenorhabditis elegans Temporarily
assigned gene nameprotein 84, isoform a protein.
Length = 834
Score = 30.3 bits (65), Expect = 1.1
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +3
Query: 273 CEIC-TKPLAEEECIRLTCYHVFHWACAESRYRALPRTTAPAGYQCPSC 416
C C T+P ++CI L CYH+F C ++ Y R +CP C
Sbjct: 782 CPSCKTRP---KDCIMLKCYHLFCETCIKTMYDTRQR-------KCPKC 820
>L07144-5|AAU20841.1| 837|Caenorhabditis elegans Temporarily
assigned gene nameprotein 84, isoform b protein.
Length = 837
Score = 30.3 bits (65), Expect = 1.1
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +3
Query: 273 CEIC-TKPLAEEECIRLTCYHVFHWACAESRYRALPRTTAPAGYQCPSC 416
C C T+P ++CI L CYH+F C ++ Y R +CP C
Sbjct: 785 CPSCKTRP---KDCIMLKCYHLFCETCIKTMYDTRQR-------KCPKC 823
>Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 29.5 bits (63), Expect = 2.0
Identities = 25/98 (25%), Positives = 40/98 (40%), Gaps = 2/98 (2%)
Frame = +3
Query: 132 CPKRRVTNQFCFEHRVNVC-ENCMVANHPKCIIQSYLQWLQDSDYNP-ICEICTKPLAEE 305
CP VT QF E R N C E+C + C + + L W ++ +P +C+ C
Sbjct: 305 CPSDPVTGQFKCECRHNTCGESC----NRCCPLFNQLPWKPGTNSHPNVCQQC------- 353
Query: 306 ECIRLTCYHVFHWACAESRYRALPRTTAPAGYQCPSCA 419
+C V+ +++ P G +C CA
Sbjct: 354 QCFNHAHSCVYDDELDRNKWSITPEGVYEGGGRCLECA 391
>AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 29.5 bits (63), Expect = 2.0
Identities = 25/98 (25%), Positives = 40/98 (40%), Gaps = 2/98 (2%)
Frame = +3
Query: 132 CPKRRVTNQFCFEHRVNVC-ENCMVANHPKCIIQSYLQWLQDSDYNP-ICEICTKPLAEE 305
CP VT QF E R N C E+C + C + + L W ++ +P +C+ C
Sbjct: 305 CPSDPVTGQFKCECRHNTCGESC----NRCCPLFNQLPWKPGTNSHPNVCQQC------- 353
Query: 306 ECIRLTCYHVFHWACAESRYRALPRTTAPAGYQCPSCA 419
+C V+ +++ P G +C CA
Sbjct: 354 QCFNHAHSCVYDDELDRNKWSITPEGVYEGGGRCLECA 391
>AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3102
Score = 29.5 bits (63), Expect = 2.0
Identities = 25/98 (25%), Positives = 40/98 (40%), Gaps = 2/98 (2%)
Frame = +3
Query: 132 CPKRRVTNQFCFEHRVNVC-ENCMVANHPKCIIQSYLQWLQDSDYNP-ICEICTKPLAEE 305
CP VT QF E R N C E+C + C + + L W ++ +P +C+ C
Sbjct: 305 CPSDPVTGQFKCECRHNTCGESC----NRCCPLFNQLPWKPGTNSHPNVCQQC------- 353
Query: 306 ECIRLTCYHVFHWACAESRYRALPRTTAPAGYQCPSCA 419
+C V+ +++ P G +C CA
Sbjct: 354 QCFNHAHSCVYDDELDRNKWSITPEGVYEGGGRCLECA 391
>Z82080-4|CAC70117.1| 1125|Caenorhabditis elegans Hypothetical protein
W09G3.6 protein.
Length = 1125
Score = 29.1 bits (62), Expect = 2.6
Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 6/53 (11%)
Frame = +3
Query: 231 SYLQWLQDSDYNPICEICTKPL------AEEECIRLTCYHVFHWACAESRYRA 371
S W+ D+ N C +CT P+ A+ I C HV+H C R+ A
Sbjct: 1039 SISSWIVDT--NGKCPMCTLPVKMVVGGADRGVISYFCGHVYHKICLTGRFNA 1089
>Z81515-10|CAH60782.1| 413|Caenorhabditis elegans Hypothetical
protein F26H11.2g protein.
Length = 413
Score = 29.1 bits (62), Expect = 2.6
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +3
Query: 186 CENCMVANHPKCIIQSYLQWLQDSDYNPICEICTK 290
C++C HP+C+ + + Q +DYN C CT+
Sbjct: 196 CDSCQGWFHPECVGTTRAEAEQAADYN--CPACTR 228
>Z81515-9|CAH04722.1| 2266|Caenorhabditis elegans Hypothetical protein
F26H11.2c protein.
Length = 2266
Score = 29.1 bits (62), Expect = 2.6
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +3
Query: 186 CENCMVANHPKCIIQSYLQWLQDSDYNPICEICTK 290
C++C HP+C+ + + Q +DYN C CT+
Sbjct: 2049 CDSCQGWFHPECVGTTRAEAEQAADYN--CPACTR 2081
>Z81515-8|CAB54234.3| 692|Caenorhabditis elegans Hypothetical
protein F26H11.2d protein.
Length = 692
Score = 29.1 bits (62), Expect = 2.6
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +3
Query: 186 CENCMVANHPKCIIQSYLQWLQDSDYNPICEICTK 290
C++C HP+C+ + + Q +DYN C CT+
Sbjct: 475 CDSCQGWFHPECVGTTRAEAEQAADYN--CPACTR 507
>Z81515-7|CAB04195.1| 510|Caenorhabditis elegans Hypothetical
protein F26H11.2f protein.
Length = 510
Score = 29.1 bits (62), Expect = 2.6
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +3
Query: 186 CENCMVANHPKCIIQSYLQWLQDSDYNPICEICTK 290
C++C HP+C+ + + Q +DYN C CT+
Sbjct: 293 CDSCQGWFHPECVGTTRAEAEQAADYN--CPACTR 325
>Z81515-6|CAB04198.1| 405|Caenorhabditis elegans Hypothetical
protein F26H11.2e protein.
Length = 405
Score = 29.1 bits (62), Expect = 2.6
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +3
Query: 186 CENCMVANHPKCIIQSYLQWLQDSDYNPICEICTK 290
C++C HP+C+ + + Q +DYN C CT+
Sbjct: 188 CDSCQGWFHPECVGTTRAEAEQAADYN--CPACTR 220
>AL031620-4|CAA20925.1| 456|Caenorhabditis elegans Hypothetical
protein C18B12.4 protein.
Length = 456
Score = 29.1 bits (62), Expect = 2.6
Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = +3
Query: 273 CEICTKPLAEEECIR-LTCYHVFHWACAE 356
C IC + A E +R L C HVFH C +
Sbjct: 247 CAICLESFASGEKLRHLPCRHVFHCNCID 275
>AC006629-1|AAK18925.1| 330|Caenorhabditis elegans Hypothetical
protein F12E12.5 protein.
Length = 330
Score = 29.1 bits (62), Expect = 2.6
Identities = 17/66 (25%), Positives = 28/66 (42%)
Frame = +3
Query: 249 QDSDYNPICEICTKPLAEEECIRLTCYHVFHWACAESRYRALPRTTAPAGYQCPSCATPV 428
QDS P C++C + A ++ +R H+ H C R + ++C +C
Sbjct: 21 QDSAKVPQCQVCKRKFANQKTLRT---HMKHITCRPGRSNVVNHK-----FRCENCEKQF 72
Query: 429 FPPPNL 446
PNL
Sbjct: 73 TNKPNL 78
>Z81143-1|CAB03513.1| 381|Caenorhabditis elegans Hypothetical
protein ZK265.2 protein.
Length = 381
Score = 28.7 bits (61), Expect = 3.4
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +3
Query: 375 PRTTAPAGYQCPSCATPVFPPPNLVSP 455
P AP GY P+ P PPP V+P
Sbjct: 319 PAPAAPKGYDAPAPTAPHPPPPAPVAP 345
>Z46242-13|CAA86328.1| 135|Caenorhabditis elegans Hypothetical
protein F35G12.9 protein.
Length = 135
Score = 28.7 bits (61), Expect = 3.4
Identities = 16/53 (30%), Positives = 24/53 (45%)
Frame = +3
Query: 258 DYNPICEICTKPLAEEECIRLTCYHVFHWACAESRYRALPRTTAPAGYQCPSC 416
++ C +C P + + C H FH C + ++ A P T P QCP C
Sbjct: 78 EFESACNMCKFPGDDCPLVLGICRHAFHRHCID-KWIAAP-TNQPRA-QCPLC 127
>U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical
protein C16A3.7 protein.
Length = 1119
Score = 28.7 bits (61), Expect = 3.4
Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 4/63 (6%)
Frame = +3
Query: 246 LQDSDYNPICEICTKPLAEEECIRL--TCYHVFH--WACAESRYRALPRTTAPAGYQCPS 413
L+++ Y C IC + + + TCYH+FH C R+ ++CP+
Sbjct: 228 LENNKYE--CAICYTRITTRQGVWSCKTCYHIFHISTGCITDWARSSRDKEGANTWRCPT 285
Query: 414 CAT 422
C T
Sbjct: 286 CQT 288
>AF101310-1|AAC69216.2| 765|Caenorhabditis elegans Hypothetical
protein C39F7.2 protein.
Length = 765
Score = 28.7 bits (61), Expect = 3.4
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +3
Query: 123 LCKCPKRRVTNQFCFEHRVNVCENCMVANHP 215
LC+ + R+ N FC + + C C A HP
Sbjct: 210 LCEGSENRMANVFCEQCDIYYCTPCQTALHP 240
>Z72511-3|CAA96657.1| 610|Caenorhabditis elegans Hypothetical
protein F55A11.3 protein.
Length = 610
Score = 28.3 bits (60), Expect = 4.5
Identities = 25/88 (28%), Positives = 36/88 (40%), Gaps = 5/88 (5%)
Frame = +3
Query: 273 CEICTKPLAEEECI-RLTCYHVFHWACAESRYRALPRTTAPAGYQCPSCATPVFPPPNLV 449
C IC + + + RL C HVFH C S ++ CP+C T ++ N
Sbjct: 292 CIICREEMTVDASPKRLPCSHVFHAHCLRSWFQ--------RQQTCPTCRTDIWQGRNGA 343
Query: 450 SP---VADVLKEKL-AGVNWARAGLGLP 521
+ AD A V A+ G G+P
Sbjct: 344 AAGGNAADAAANVADANVAGAQIGAGMP 371
>AC024809-5|AAF59544.3| 287|Caenorhabditis elegans Hypothetical
protein Y53G8AR.5 protein.
Length = 287
Score = 27.9 bits (59), Expect = 6.0
Identities = 15/44 (34%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Frame = +3
Query: 222 IIQSYLQWLQDSDY-NPICEICTKPLAEEECIRLTCYHVFHWAC 350
I Q +L ++ + N C IC LA I C H H+AC
Sbjct: 101 IFQHCSDFLTENQHQNMDCSICLICLASSPIIVTACDHFMHFAC 144
>Z82062-2|CAB04890.1| 489|Caenorhabditis elegans Hypothetical
protein W02A11.3 protein.
Length = 489
Score = 27.5 bits (58), Expect = 7.9
Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 1/59 (1%)
Frame = +3
Query: 273 CEICTKPLAEEECI-RLTCYHVFHWACAESRYRALPRTTAPAGYQCPSCATPVFPPPNL 446
C +C + E I +L C HVFH C Y+ L +CP C + P +L
Sbjct: 433 CTVCLSSFEDGESIQKLRCNHVFHPECI---YKWL-----DINKRCPMCREEIDRPESL 483
>AL132862-5|CAB70227.1| 419|Caenorhabditis elegans Hypothetical
protein Y73F8A.9 protein.
Length = 419
Score = 27.5 bits (58), Expect = 7.9
Identities = 26/109 (23%), Positives = 42/109 (38%), Gaps = 7/109 (6%)
Frame = +3
Query: 129 KCPKRRVTNQFCFEHRVNVCENCMVANHPKCIIQSYLQWLQDSDYNPICEICTK------ 290
+C ++V Q C++ C+ P+C+ Q Q Q S P C+ C
Sbjct: 213 QCLLQQVPVQQCYQECTQPCQTTCQQAAPQCVQQCAPQCQQPS--APQCQQCQNTCQQYA 270
Query: 291 PLAEEECIRLTCYHVFHWACAESRYRALPRTTAPAGYQC-PSCATPVFP 434
P+ +++C C AC + + + T QC P C P P
Sbjct: 271 PVCQQQCAP-QCTLPSAPACQQCQTSC--QQTQQCQQQCIPQCQQPAAP 316
>AL132862-4|CAB60533.1| 420|Caenorhabditis elegans Hypothetical
protein Y73F8A.8 protein.
Length = 420
Score = 27.5 bits (58), Expect = 7.9
Identities = 26/109 (23%), Positives = 42/109 (38%), Gaps = 7/109 (6%)
Frame = +3
Query: 129 KCPKRRVTNQFCFEHRVNVCENCMVANHPKCIIQSYLQWLQDSDYNPICEICTK------ 290
+C ++V Q C++ C+ P+C+ Q Q Q S P C+ C
Sbjct: 214 QCLLQQVPVQQCYQECTQPCQTTCQQAAPQCVQQCAPQCQQPS--APQCQQCQNTCQQYA 271
Query: 291 PLAEEECIRLTCYHVFHWACAESRYRALPRTTAPAGYQC-PSCATPVFP 434
P+ +++C C AC + + + T QC P C P P
Sbjct: 272 PVCQQQCAP-QCTLPSAPACQQCQTSC--QQTQQCQQQCIPQCQQPAAP 317
>AL117195-28|CAB55014.1| 458|Caenorhabditis elegans Hypothetical
protein Y57A10A.11 protein.
Length = 458
Score = 27.5 bits (58), Expect = 7.9
Identities = 14/38 (36%), Positives = 17/38 (44%)
Frame = +3
Query: 366 RALPRTTAPAGYQCPSCATPVFPPPNLVSPVADVLKEK 479
R RT AGY+ + T F PP PV KE+
Sbjct: 73 RGFNRTARQAGYEYSNDETTPFAPPKFGYPVVGEAKEE 110
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,685,515
Number of Sequences: 27780
Number of extensions: 290004
Number of successful extensions: 863
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 828
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 858
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1311096392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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