Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_J07
(662 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0113 - 854108-854302,854399-854542,854658-854893,855036-85... 54 8e-08
05_01_0042 - 290077-290676,291093-291233,291675-291764,292364-29... 51 7e-07
05_01_0160 + 1081416-1081647,1081840-1082012,1082169-1082246,108... 40 0.002
03_01_0342 - 2695323-2697007,2697134-2697248,2697369-2697524 38 0.005
02_04_0194 + 20820985-20821027,20822168-20822367,20822477-208225... 37 0.016
03_01_0360 + 2815067-2816033,2816120-2816198,2816275-2816342,281... 33 0.20
12_02_0884 - 23986393-23987486,23988213-23988314,23988561-239886... 32 0.47
07_01_1056 - 9278744-9279354,9279888-9279984 31 0.82
04_01_0354 - 4646826-4647314 30 1.4
01_05_0421 + 21990034-21990392,21991691-21992681 30 1.9
03_06_0607 + 35037467-35038624 25 2.4
03_05_0255 + 22435027-22435072,22436022-22437085 29 2.5
02_04_0316 - 21978330-21979397 29 2.5
01_01_0335 - 2706916-2706984,2707062-2707825,2710014-2710053,271... 29 3.3
05_01_0346 - 2710420-2710683,2711595-2711672,2711861-2711888,271... 29 4.4
01_05_0736 - 24760576-24760690,24760885-24761108,24761188-247612... 29 4.4
07_03_0792 - 21541301-21542143,21542426-21542661,21543177-215433... 28 5.8
01_06_1729 + 39486553-39487413,39487953-39488020,39489574-394901... 28 5.8
01_06_1614 - 38648495-38649706 28 5.8
05_05_0117 + 22503271-22503891 28 7.6
04_03_0465 - 16227552-16227842,16227993-16228217,16228342-162284... 28 7.6
02_05_0598 + 30250535-30251218 28 7.6
01_01_0990 + 7847066-7847478,7847713-7848679 28 7.6
>02_01_0113 -
854108-854302,854399-854542,854658-854893,855036-855315,
856891-857031,857259-857372
Length = 369
Score = 54.4 bits (125), Expect = 8e-08
Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 3/90 (3%)
Frame = +3
Query: 12 EFTCNDCGRNFKQRIHIVRHMKIHSQFASKNKQFKCPYNHCQRVYSRNSNLKQHIMIKHV 191
+ TC +CG +F++ H+ +HM+ HS + F CP C Y R +L +H M+KH
Sbjct: 59 DHTCQECGASFQKPAHLKQHMQSHSD----ERSFICPLEDCPFSYIRKDHLNRH-MLKHQ 113
Query: 192 RMTHECPI--CKAQLCTKAKLLNHLK-LHD 272
C + C + KA + H+K +H+
Sbjct: 114 GKLFTCSMDGCGRKFSIKANMQRHVKEIHE 143
Score = 46.4 bits (105), Expect = 2e-05
Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 5/82 (6%)
Frame = +3
Query: 9 KEFTCN--DCGRNFKQRIHIVRHMK-IHS-QFASK-NKQFKCPYNHCQRVYSRNSNLKQH 173
K FTC+ CGR F + ++ RH+K IH + A+K N+QF C C +V+ S +K+H
Sbjct: 115 KLFTCSMDGCGRKFSIKANMQRHVKEIHEDETATKSNRQFVCKEEGCNKVFKYASKMKKH 174
Query: 174 IMIKHVRMTHECPICKAQLCTK 239
HV++ + +C C K
Sbjct: 175 -EESHVKLDYVEVVCCEPGCMK 195
Score = 41.5 bits (93), Expect = 6e-04
Identities = 22/81 (27%), Positives = 40/81 (49%)
Frame = +3
Query: 21 CNDCGRNFKQRIHIVRHMKIHSQFASKNKQFKCPYNHCQRVYSRNSNLKQHIMIKHVRMT 200
C+ CG ++ +I RH++ H + S ++ KC + C+ +S SNL +HI H ++
Sbjct: 216 CDICGEKHLKK-NIKRHLRAHEEVPS-TERIKCSFEGCECSFSNKSNLTKHIKASHDQVK 273
Query: 201 HECPICKAQLCTKAKLLNHLK 263
C+ C K H++
Sbjct: 274 PFA--CRFTGCEKVFPYKHVR 292
>05_01_0042 -
290077-290676,291093-291233,291675-291764,292364-292563,
292685-292743,292827-292942
Length = 401
Score = 51.2 bits (117), Expect = 7e-07
Identities = 26/92 (28%), Positives = 46/92 (50%), Gaps = 4/92 (4%)
Frame = +3
Query: 9 KEFTCND--CGRNFKQRIHIVRHMKIHSQFASKNKQFKCPYNHCQRVYSRNSNLKQHIMI 182
+++ C + CG+ F + RH IH+ K F CP+ C + +S + NL+ H+
Sbjct: 114 RQYICQEPGCGKKFVDSSKLKRHHLIHTG----QKDFICPHPGCGKAFSLDFNLRSHLKT 169
Query: 183 KHVRMTHECPI--CKAQLCTKAKLLNHLKLHD 272
+ H CP C + + +KL +H+K H+
Sbjct: 170 HALENYHVCPFPACGKRFTSDSKLKSHVKGHE 201
>05_01_0160 +
1081416-1081647,1081840-1082012,1082169-1082246,
1082372-1082529,1082558-1082709,1083232-1083290,
1083633-1083912,1084235-1084470,1084601-1084744,
1084845-1085012
Length = 559
Score = 39.5 bits (88), Expect = 0.002
Identities = 29/94 (30%), Positives = 45/94 (47%), Gaps = 6/94 (6%)
Frame = +3
Query: 9 KEFTC--NDCGRNFKQRIHIVRHMK-IHSQFA--SKNKQFKCPYNHCQRVYSRNSNLKQH 173
K F C C R F + +I RH++ +H + K+F CP +C + + S L++H
Sbjct: 314 KLFACPMEGCNRKFTIKGNIQRHVQEMHKDGSPCESKKEFICPEENCGKTFKYASKLQKH 373
Query: 174 IMIKHVRMTHECPICKAQLCTKA-KLLNHLKLHD 272
HV++ + IC C KA L LK H+
Sbjct: 374 -EESHVKLDYSEVICCEPGCMKAFTNLECLKAHN 406
Score = 36.7 bits (81), Expect = 0.016
Identities = 16/63 (25%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = +3
Query: 6 RKEFTCN--DCGRNFKQRIHIVRHMKIHSQFASKNKQFKCPYNHCQRVYSRNSNLKQHIM 179
++ F+C+ C ++ ++ H+ RH+ H + K F CP C R ++ N+++H+
Sbjct: 284 QRPFSCHVDGCPFSYSRKDHLNRHLLTH-----QGKLFACPMEGCNRKFTIKGNIQRHVQ 338
Query: 180 IKH 188
H
Sbjct: 339 EMH 341
Score = 35.1 bits (77), Expect = 0.050
Identities = 27/123 (21%), Positives = 56/123 (45%), Gaps = 3/123 (2%)
Frame = +3
Query: 9 KEFTCNDCGRNFKQRIHIVRHMKIHSQFASKNKQFKCPYNHCQRVYSRNSNLKQHIMIKH 188
+ C+ CG ++ + RH ++H + + ++ +C C+ +S+ SNL +H +K
Sbjct: 411 RHVVCDVCGTKQLKK-NFKRHQRMH-EGSCVTERVRCHLKDCKLSFSKKSNLDKH--VKA 466
Query: 189 VRMTHECPICKAQLCTKAKLLNHLK-LHDVQKPNVIVPKT--KATGRKERKDAGIPRISI 359
V +C C K+ H++ H+ +V V + G + R+ G R +I
Sbjct: 467 VHEQKRPFVCGFSGCGKSFSYKHVRDNHEKSSAHVYVQANFEEIDGERPRQAGGRKRKAI 526
Query: 360 ALK 368
++
Sbjct: 527 PVE 529
>03_01_0342 - 2695323-2697007,2697134-2697248,2697369-2697524
Length = 651
Score = 38.3 bits (85), Expect = 0.005
Identities = 15/64 (23%), Positives = 31/64 (48%)
Frame = +3
Query: 18 TCNDCGRNFKQRIHIVRHMKIHSQFASKNKQFKCPYNHCQRVYSRNSNLKQHIMIKHVRM 197
T CGR+F+ ++ RH IH+ + +KCP+ C + + + +H + +
Sbjct: 566 TVKSCGRHFRSHKYLRRHQSIHND----DMPYKCPWEGCSMAFKWSWDRGEHFQVHAGKR 621
Query: 198 THEC 209
++C
Sbjct: 622 PYKC 625
>02_04_0194 +
20820985-20821027,20822168-20822367,20822477-20822566,
20822820-20822825,20822866-20823009,20823089-20823580
Length = 324
Score = 36.7 bits (81), Expect = 0.016
Identities = 26/98 (26%), Positives = 41/98 (41%), Gaps = 6/98 (6%)
Frame = +3
Query: 15 FTCN--DCGRNFKQRIHIVRHMKIHSQFASKNKQFKCPYNHCQRVYSRNSNLKQHIMIKH 188
F C+ CG+ F + +H +H + +Q+ C Y C + + +S LK+H +I
Sbjct: 43 FLCSYEGCGKTFVDAGALRKHAHVHGE-----RQYVCHYAGCDKKFLDSSKLKRHFLIHT 97
Query: 189 VRMTHECPI--CKAQLCTKA--KLLNHLKLHDVQKPNV 290
CP C L L H+K H V +V
Sbjct: 98 GEKNFVCPHEGCGKVLAFSLDFNLKAHMKTHSVDNYHV 135
Score = 34.3 bits (75), Expect = 0.088
Identities = 27/105 (25%), Positives = 42/105 (40%), Gaps = 4/105 (3%)
Frame = +3
Query: 9 KEFTC--NDCGR--NFKQRIHIVRHMKIHSQFASKNKQFKCPYNHCQRVYSRNSNLKQHI 176
K F C CG+ F ++ HMK HS + C Y C R +++ S L+ HI
Sbjct: 100 KNFVCPHEGCGKVLAFSLDFNLKAHMKTHSV----DNYHVCKYPECARRFTQESKLRAHI 155
Query: 177 MIKHVRMTHECPICKAQLCTKAKLLNHLKLHDVQKPNVIVPKTKA 311
+H + + P ++ L +H KP+ P A
Sbjct: 156 KQQHEKGGLQNP--GGSATNRSGLADHSHNSHTPKPSAAPPTPSA 198
>03_01_0360 + 2815067-2816033,2816120-2816198,2816275-2816342,
2817382-2817464,2821566-2823083
Length = 904
Score = 33.1 bits (72), Expect = 0.20
Identities = 16/65 (24%), Positives = 28/65 (43%), Gaps = 2/65 (3%)
Frame = +3
Query: 21 CND--CGRNFKQRIHIVRHMKIHSQFASKNKQFKCPYNHCQRVYSRNSNLKQHIMIKHVR 194
C D CG+ F ++ RH +H + FKCP++ C + +HI +
Sbjct: 819 CTDESCGKRFSSHKYLKRHQCVHRD----ERPFKCPWDGCPMTFKWLWAQTEHIRVHTGE 874
Query: 195 MTHEC 209
++C
Sbjct: 875 RPYKC 879
>12_02_0884 -
23986393-23987486,23988213-23988314,23988561-23988642,
23989231-23989368
Length = 471
Score = 31.9 bits (69), Expect = 0.47
Identities = 20/99 (20%), Positives = 40/99 (40%)
Frame = +3
Query: 21 CNDCGRNFKQRIHIVRHMKIHSQFASKNKQFKCPYNHCQRVYSRNSNLKQHIMIKHVRMT 200
CN C ++F+ + HM H ++ K P S+ ++++ +
Sbjct: 120 CNKCDKSFRSGNALGGHMSCHRSVGNQPKSTSSPPTVVDLHMPLLSSCDDNLLL--LPPE 177
Query: 201 HECPICKAQLCTKAKLLNHLKLHDVQKPNVIVPKTKATG 317
+C +C T L H+ +H +K V+ + +A G
Sbjct: 178 TQCQMCSKVFSTSGSLREHMMMHGGEKV-VVKAEEEAAG 215
>07_01_1056 - 9278744-9279354,9279888-9279984
Length = 235
Score = 31.1 bits (67), Expect = 0.82
Identities = 12/31 (38%), Positives = 21/31 (67%), Gaps = 2/31 (6%)
Frame = +3
Query: 93 ASKNKQFKCPYNHC--QRVYSRNSNLKQHIM 179
A K K+ KCP HC Q+ ++ +S ++QH++
Sbjct: 69 AKKTKEIKCPCKHCKNQKFWNDSSVIEQHLV 99
>04_01_0354 - 4646826-4647314
Length = 162
Score = 30.3 bits (65), Expect = 1.4
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +3
Query: 15 FTCNDCGRNFKQRIHIVRHMKIHSQFASKNKQFKCPYNH 131
+TC C R F+ + HM +H + ++ +QF P H
Sbjct: 46 YTCGYCRREFRSAQALGGHMNVHRRERARLRQFPNPRPH 84
>01_05_0421 + 21990034-21990392,21991691-21992681
Length = 449
Score = 29.9 bits (64), Expect = 1.9
Identities = 22/99 (22%), Positives = 38/99 (38%), Gaps = 15/99 (15%)
Frame = +3
Query: 15 FTCNDCGRNFKQRIHIVRHMKIH----------SQFASKNKQFKCPYNHC-----QRVYS 149
F C CG+ F++ ++ H + H S+ A + K + CP C R
Sbjct: 6 FVCEICGKGFQRDQNLQLHRRGHNLPWKLKQRGSKEAVRKKVYICPEASCVHHDPSRALG 65
Query: 150 RNSNLKQHIMIKHVRMTHECPICKAQLCTKAKLLNHLKL 266
+ +K+H KH +C C + + H K+
Sbjct: 66 DLTGIKKHFFRKHGEKKWKCDKCSKKYAVHSDWKAHSKI 104
>03_06_0607 + 35037467-35038624
Length = 385
Score = 25.0 bits (52), Expect(2) = 2.4
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = +3
Query: 21 CNDCGRNFKQRIHIVRHMKIHSQ 89
C CG+ FK+ ++ HM+ H +
Sbjct: 166 CGVCGKGFKRDANLRMHMRGHGE 188
Score = 23.0 bits (47), Expect(2) = 2.4
Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
Frame = +3
Query: 93 ASKNKQFKCPYNHCQRVYSRNS--NLKQHIMIK-HVRMTH 203
A++ + + CPY C+R S LK +K H R +H
Sbjct: 213 AARRRFYSCPYVGCKRNREHKSFQPLKTPTCVKNHYRRSH 252
>03_05_0255 + 22435027-22435072,22436022-22437085
Length = 369
Score = 29.5 bits (63), Expect = 2.5
Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 3/45 (6%)
Frame = +3
Query: 201 HECPICKAQLCTKAKLLNHLKLHDV--QKPNVIVPKTKAT-GRKE 326
HEC +C L + + L H+K H V K PKT T RK+
Sbjct: 277 HECRLCGKVLASGSALGGHMKSHSVPAHKKVATFPKTSVTPSRKQ 321
>02_04_0316 - 21978330-21979397
Length = 355
Score = 29.5 bits (63), Expect = 2.5
Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 19/83 (22%)
Frame = +3
Query: 21 CNDCGRNFKQRIHIVRHMKIHS-QF---------------ASKNKQFKCPYNHC--QRVY 146
C+ CG+ F++ ++ HM+ H +F A + +F CPY C R +
Sbjct: 146 CDICGKGFRRDANLRMHMRAHGDRFKTLDALSRPGQPKPPAGREVRFSCPYAGCNRNRAH 205
Query: 147 SRNSNLKQHIMIK-HVRMTHECP 212
R LK + + H R +H CP
Sbjct: 206 RRFRPLKSAVCARNHFRRSH-CP 227
>01_01_0335 -
2706916-2706984,2707062-2707825,2710014-2710053,
2710105-2710173,2710268-2710336
Length = 336
Score = 29.1 bits (62), Expect = 3.3
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = -2
Query: 562 KYFNKNNKYLVVSVDTFSTYFLTFYLLKRILQT 464
KYF + ++ V T++ Y+ F+ KRI++T
Sbjct: 140 KYFGYEGERVMHPVQTYAMYYWCFHYFKRIMET 172
>05_01_0346 -
2710420-2710683,2711595-2711672,2711861-2711888,
2711973-2712022,2712112-2712165,2712240-2712281,
2712583-2712646,2713831-2713851,2714310-2714479,
2714746-2714910
Length = 311
Score = 28.7 bits (61), Expect = 4.4
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +3
Query: 69 HMKIHSQFASKNKQFKCPYNHCQ-RVYSRNSNLKQHIMIKHVRMTHEC 209
H+K+ Q K + HCQ R +NS +K I + HV++ ++C
Sbjct: 245 HLKLSCQLGKKLEM-----EHCQVRFLIKNSFVKMLIQVSHVQLLYKC 287
>01_05_0736 -
24760576-24760690,24760885-24761108,24761188-24761248,
24761909-24763992
Length = 827
Score = 28.7 bits (61), Expect = 4.4
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -1
Query: 377 ASQFECYRYPRNPCIFSLFSARSL 306
A Q ECYR+ R+P + S + RS+
Sbjct: 174 AGQHECYRFERSPSVSSDYDRRSV 197
>07_03_0792 -
21541301-21542143,21542426-21542661,21543177-21543373,
21543459-21544173,21544250-21544892,21545970-21546139,
21546442-21546943
Length = 1101
Score = 28.3 bits (60), Expect = 5.8
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +3
Query: 297 PKTKATGRKERKDAGIPRISIALKLAGI 380
P TK+ K++ +G+P I L +AGI
Sbjct: 375 PPTKSVAEKKKDSSGMPNAFIGLSIAGI 402
>01_06_1729 + 39486553-39487413,39487953-39488020,39489574-39490154,
39490623-39491432,39491738-39493035
Length = 1205
Score = 28.3 bits (60), Expect = 5.8
Identities = 12/52 (23%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Frame = +3
Query: 30 CGRNFKQRIHIVRHMKIHSQFASKNKQFKCPYNHCQRVY----SRNSNLKQH 173
CG+ F ++++H K+H+ ++ CP+ C + +R +L+ H
Sbjct: 1116 CGKKFFSHKYLLQHRKVHTD----DRPLTCPWKGCNMAFKWPWARTEHLRVH 1163
>01_06_1614 - 38648495-38649706
Length = 403
Score = 28.3 bits (60), Expect = 5.8
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = +3
Query: 6 RKEFTCNDCGRNFKQRIHIVRHMKIHSQFASKNKQ 110
R F C+ C + F R + HM++H K K+
Sbjct: 102 RVAFPCHVCSKEFGSRKAVHGHMRVHQADKDKEKE 136
>05_05_0117 + 22503271-22503891
Length = 206
Score = 27.9 bits (59), Expect = 7.6
Identities = 10/36 (27%), Positives = 16/36 (44%)
Frame = +3
Query: 201 HECPICKAQLCTKAKLLNHLKLHDVQKPNVIVPKTK 308
H CP+C + L H++ H +V P+ K
Sbjct: 120 HGCPVCGLEFAVGQALGGHMRRHRAAAGDVAAPRVK 155
>04_03_0465 -
16227552-16227842,16227993-16228217,16228342-16228477,
16229756-16229974,16230269-16230569,16231865-16232108
Length = 471
Score = 27.9 bits (59), Expect = 7.6
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = -2
Query: 397 LLSAYLMPASLSAIDILGIPASFRSFRPVALVFGTITFGFCTSCSFKWLSS 245
L + YL A S D + + A S P+ V GT+ G+ T +F+W++S
Sbjct: 304 LSTYYLQEAEPSFGDQITLTA-MSSVIPLLCVSGTVGMGYVTMETFEWVAS 353
>02_05_0598 + 30250535-30251218
Length = 227
Score = 27.9 bits (59), Expect = 7.6
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = +3
Query: 519 STETTKYLLFLLKYFSVVCHLIINTTYVLINCFEVTSSDIVV 644
S+ T +LLFL YF+VV + + +V N + + D+++
Sbjct: 121 SSPLTPFLLFLTLYFAVVRNQQAFSRFVRFNAMQAVALDVLL 162
>01_01_0990 + 7847066-7847478,7847713-7848679
Length = 459
Score = 27.9 bits (59), Expect = 7.6
Identities = 21/97 (21%), Positives = 38/97 (39%), Gaps = 14/97 (14%)
Frame = +3
Query: 15 FTCNDCGRNFKQRIHIVRHMKIHS------QFASK---NKQFKCPYNHC-----QRVYSR 152
F C CG+ F++ ++ H + H+ Q + K + + CP C R
Sbjct: 25 FVCEICGKGFQRDQNLQLHRRGHNLPWKLRQRSGKEPRKRVYVCPEKSCVHHNPSRALGD 84
Query: 153 NSNLKQHIMIKHVRMTHECPICKAQLCTKAKLLNHLK 263
+ +K+H KH +C C + ++ H K
Sbjct: 85 LTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSK 121
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,383,011
Number of Sequences: 37544
Number of extensions: 231938
Number of successful extensions: 755
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 694
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 747
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1667659452
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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