Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_J06
(502 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 113 9e-26
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 113 9e-26
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 100 1e-21
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 100 1e-21
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 75 2e-14
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 75 2e-14
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 75 2e-14
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 75 2e-14
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 75 2e-14
AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical ... 62 2e-10
AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical ... 62 2e-10
AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical ... 62 2e-10
Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical pr... 52 3e-07
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 52 3e-07
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 52 3e-07
AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor pr... 50 7e-07
Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical pr... 50 1e-06
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 49 2e-06
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 49 2e-06
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 48 3e-06
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 48 3e-06
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 48 3e-06
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 48 3e-06
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 48 3e-06
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 48 5e-06
U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (dele... 47 7e-06
AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein. 47 7e-06
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 47 9e-06
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 47 9e-06
Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical pr... 44 5e-05
Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical pr... 44 8e-05
AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein... 44 8e-05
AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein... 44 8e-05
AC024810-13|AAK68518.1| 405|Caenorhabditis elegans Feminization... 44 8e-05
AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization... 44 8e-05
Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical p... 43 1e-04
Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical pr... 42 2e-04
Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical pr... 42 2e-04
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 42 2e-04
AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 42 2e-04
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 42 3e-04
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 42 3e-04
Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical pr... 42 3e-04
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 41 4e-04
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 41 4e-04
Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical p... 41 4e-04
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 41 4e-04
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 41 6e-04
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 40 0.001
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 40 0.001
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 40 0.001
EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA... 40 0.001
EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA... 40 0.001
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 40 0.001
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 40 0.001
AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily a... 40 0.001
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 39 0.002
EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA... 38 0.004
AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna... 38 0.004
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 38 0.004
Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical pr... 38 0.005
AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative RNA-... 38 0.005
Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical pr... 37 0.007
U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor... 36 0.017
AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing... 36 0.017
AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing... 36 0.017
AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing... 36 0.017
U23450-1|AAK31467.2| 422|Caenorhabditis elegans Cpeb polya bind... 36 0.022
Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical pr... 35 0.029
Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical pr... 35 0.029
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 35 0.029
U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical p... 35 0.029
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 35 0.029
U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical p... 34 0.050
AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna... 34 0.050
AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical ... 34 0.050
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 33 0.088
Z68879-10|CAA93082.2| 473|Caenorhabditis elegans Hypothetical p... 33 0.088
AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical... 33 0.15
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 33 0.15
Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical pr... 32 0.20
Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical pr... 32 0.20
Z19154-9|CAA79552.2| 559|Caenorhabditis elegans Hypothetical pr... 32 0.20
Z99281-6|CAB54458.2| 625|Caenorhabditis elegans Hypothetical pr... 32 0.27
Z99281-5|CAB54457.1| 553|Caenorhabditis elegans Hypothetical pr... 32 0.27
U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein (sp... 32 0.27
U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein (spl... 32 0.27
U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein (spl... 32 0.27
U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna b... 32 0.27
Z81494-10|CAN86581.1| 1507|Caenorhabditis elegans Hypothetical p... 31 0.36
Z81494-9|CAB04052.2| 1505|Caenorhabditis elegans Hypothetical pr... 31 0.36
Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical pr... 31 0.47
Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical pr... 31 0.47
Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical pr... 31 0.47
Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical pr... 30 0.82
Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical pr... 30 0.82
Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical pr... 30 0.82
Z75714-1|CAB00058.1| 194|Caenorhabditis elegans Hypothetical pr... 30 1.1
U28944-8|AAK68193.1| 103|Caenorhabditis elegans Hypothetical pr... 29 1.4
AC006627-3|AAK85461.1| 504|Caenorhabditis elegans Hypothetical ... 29 1.4
Z81069-1|CAB02990.1| 359|Caenorhabditis elegans Hypothetical pr... 29 1.9
U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical pr... 29 2.5
AF003145-3|AAB57717.1| 751|Caenorhabditis elegans Cpeb polya bi... 29 2.5
AF003140-8|AAB54169.1| 396|Caenorhabditis elegans Hypothetical ... 28 3.3
Z19155-4|CAA79560.3| 844|Caenorhabditis elegans Hypothetical pr... 27 5.8
AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical ... 27 5.8
AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical ... 27 5.8
AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical ... 27 5.8
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 27 7.6
Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical pr... 27 7.6
Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical pr... 27 7.6
DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding p... 27 7.6
AF026210-5|AAB71287.1| 632|Caenorhabditis elegans Hypothetical ... 27 7.6
AF026210-4|AAT81192.1| 627|Caenorhabditis elegans Hypothetical ... 27 7.6
AF022982-4|AAB69938.1| 296|Caenorhabditis elegans Dnaj domain (... 27 7.6
AC024791-14|AAF60658.1| 767|Caenorhabditis elegans P300/cbp ass... 27 7.6
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 113 bits (271), Expect = 9e-26
Identities = 53/122 (43%), Positives = 75/122 (61%), Gaps = 1/122 (0%)
Frame = +1
Query: 10 GRSRGFAFIVFKAPDSIDKVMAAGEHTINSKKVDPKKAKARHGK-IFVGGLSSEISDDEI 186
GRSRGFAF+ F + +AA E TI K V+ K AK+R K +FVGGL S+ S+ ++
Sbjct: 67 GRSRGFAFVEFTTGEGCKLALAAREQTIKGKSVEVKPAKSRENKKVFVGGLPSDYSEQDL 126
Query: 187 KNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLKTPKQTIGGKEVDVKRAT 366
++ F FG + ++E PFDK R+ F FI FE E+ ++ KQT G +E DVK+A
Sbjct: 127 RSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKASSQTKQTFGTRECDVKKAV 186
Query: 367 PK 372
P+
Sbjct: 187 PQ 188
Score = 65.3 bits (152), Expect = 2e-11
Identities = 26/75 (34%), Positives = 49/75 (65%)
Frame = +1
Query: 139 KIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLKT 318
KIFVGG+S E++++++ + F+ +G + + ++ +D+T + +GF F+ F + + L
Sbjct: 30 KIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAA 89
Query: 319 PKQTIGGKEVDVKRA 363
+QTI GK V+VK A
Sbjct: 90 REQTIKGKSVEVKPA 104
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 113 bits (271), Expect = 9e-26
Identities = 53/122 (43%), Positives = 75/122 (61%), Gaps = 1/122 (0%)
Frame = +1
Query: 10 GRSRGFAFIVFKAPDSIDKVMAAGEHTINSKKVDPKKAKARHGK-IFVGGLSSEISDDEI 186
GRSRGFAF+ F + +AA E TI K V+ K AK+R K +FVGGL S+ S+ ++
Sbjct: 67 GRSRGFAFVEFTTGEGCKLALAAREQTIKGKSVEVKPAKSRENKKVFVGGLPSDYSEQDL 126
Query: 187 KNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLKTPKQTIGGKEVDVKRAT 366
++ F FG + ++E PFDK R+ F FI FE E+ ++ KQT G +E DVK+A
Sbjct: 127 RSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKASSQTKQTFGTRECDVKKAV 186
Query: 367 PK 372
P+
Sbjct: 187 PQ 188
Score = 65.3 bits (152), Expect = 2e-11
Identities = 26/75 (34%), Positives = 49/75 (65%)
Frame = +1
Query: 139 KIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLKT 318
KIFVGG+S E++++++ + F+ +G + + ++ +D+T + +GF F+ F + + L
Sbjct: 30 KIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAA 89
Query: 319 PKQTIGGKEVDVKRA 363
+QTI GK V+VK A
Sbjct: 90 REQTIKGKSVEVKPA 104
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 99.5 bits (237), Expect = 1e-21
Identities = 47/129 (36%), Positives = 78/129 (60%), Gaps = 9/129 (6%)
Frame = +1
Query: 13 RSRGFAFIVFKAPDSIDKVMAAGEHTINSKKVDPK---------KAKARHGKIFVGGLSS 165
R+RGF FI F P S+DKV+ EH ++ KK+DPK K + K+F+GGLS+
Sbjct: 84 RARGFGFITFVDPSSVDKVLNNREHELDGKKIDPKVAFPKRTQAKLVTKTKKVFIGGLSA 143
Query: 166 EISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLKTPKQTIGGKE 345
+ +++K +F +G + + + FDK + +GF F+TF+S++V +++ + I GK
Sbjct: 144 TSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKVCEIHFHEINGKM 203
Query: 346 VDVKRATPK 372
V+ K+A PK
Sbjct: 204 VECKKAQPK 212
Score = 62.5 bits (145), Expect = 2e-10
Identities = 30/97 (30%), Positives = 52/97 (53%)
Frame = +1
Query: 82 EHTINSKKVDPKKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRK 261
E +N+ D GK+F+GGLS + + + ++++F FG + E + D + +
Sbjct: 27 EARLNADSDDGSHGSQDPGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRAR 86
Query: 262 GFCFITFESEQVVNELLKTPKQTIGGKEVDVKRATPK 372
GF FITF V+++L + + GK++D K A PK
Sbjct: 87 GFGFITFVDPSSVDKVLNNREHELDGKKIDPKVAFPK 123
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 99.5 bits (237), Expect = 1e-21
Identities = 47/129 (36%), Positives = 78/129 (60%), Gaps = 9/129 (6%)
Frame = +1
Query: 13 RSRGFAFIVFKAPDSIDKVMAAGEHTINSKKVDPK---------KAKARHGKIFVGGLSS 165
R+RGF FI F P S+DKV+ EH ++ KK+DPK K + K+F+GGLS+
Sbjct: 84 RARGFGFITFVDPSSVDKVLNNREHELDGKKIDPKVAFPKRTQAKLVTKTKKVFIGGLSA 143
Query: 166 EISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLKTPKQTIGGKE 345
+ +++K +F +G + + + FDK + +GF F+TF+S++V +++ + I GK
Sbjct: 144 TSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKVCEIHFHEINGKM 203
Query: 346 VDVKRATPK 372
V+ K+A PK
Sbjct: 204 VECKKAQPK 212
Score = 62.5 bits (145), Expect = 2e-10
Identities = 30/97 (30%), Positives = 52/97 (53%)
Frame = +1
Query: 82 EHTINSKKVDPKKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRK 261
E +N+ D GK+F+GGLS + + + ++++F FG + E + D + +
Sbjct: 27 EARLNADSDDGSHGSQDPGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRAR 86
Query: 262 GFCFITFESEQVVNELLKTPKQTIGGKEVDVKRATPK 372
GF FITF V+++L + + GK++D K A PK
Sbjct: 87 GFGFITFVDPSSVDKVLNNREHELDGKKIDPKVAFPK 123
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 75.4 bits (177), Expect = 2e-14
Identities = 37/133 (27%), Positives = 65/133 (48%), Gaps = 11/133 (8%)
Frame = +1
Query: 13 RSRGFAFIVFKAPDSIDKVMAAGEHTINSKKVDPKKAKARHGK-----------IFVGGL 159
RSRGF F+ F +D M H I+ K VDPK+A R K ++V G+
Sbjct: 62 RSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGV 121
Query: 160 SSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLKTPKQTIGG 339
+ ++D + +F+ +G + + E+ DK + +GF F+TF+ V++ + + G
Sbjct: 122 REDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNG 181
Query: 340 KEVDVKRATPKPD 378
DV++ K +
Sbjct: 182 HRCDVRKGLSKDE 194
Score = 72.5 bits (170), Expect = 2e-13
Identities = 34/80 (42%), Positives = 49/80 (61%)
Frame = +1
Query: 139 KIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLKT 318
KIFVGGL+S +DD ++ F+S FG I ++ + D T + +GF F+TF + V+ +K
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 83
Query: 319 PKQTIGGKEVDVKRATPKPD 378
I GK VD KRA P+ D
Sbjct: 84 RPHIIDGKTVDPKRAVPRDD 103
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 75.4 bits (177), Expect = 2e-14
Identities = 37/133 (27%), Positives = 65/133 (48%), Gaps = 11/133 (8%)
Frame = +1
Query: 13 RSRGFAFIVFKAPDSIDKVMAAGEHTINSKKVDPKKAKARHGK-----------IFVGGL 159
RSRGF F+ F +D M H I+ K VDPK+A R K ++V G+
Sbjct: 24 RSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGV 83
Query: 160 SSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLKTPKQTIGG 339
+ ++D + +F+ +G + + E+ DK + +GF F+TF+ V++ + + G
Sbjct: 84 REDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNG 143
Query: 340 KEVDVKRATPKPD 378
DV++ K +
Sbjct: 144 HRCDVRKGLSKDE 156
Score = 52.8 bits (121), Expect = 1e-07
Identities = 24/65 (36%), Positives = 37/65 (56%)
Frame = +1
Query: 184 IKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLKTPKQTIGGKEVDVKRA 363
++ F+S FG I ++ + D T + +GF F+TF + V+ +K I GK VD KRA
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRA 60
Query: 364 TPKPD 378
P+ D
Sbjct: 61 VPRDD 65
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 75.4 bits (177), Expect = 2e-14
Identities = 37/133 (27%), Positives = 65/133 (48%), Gaps = 11/133 (8%)
Frame = +1
Query: 13 RSRGFAFIVFKAPDSIDKVMAAGEHTINSKKVDPKKAKARHGK-----------IFVGGL 159
RSRGF F+ F +D M H I+ K VDPK+A R K ++V G+
Sbjct: 24 RSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGV 83
Query: 160 SSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLKTPKQTIGG 339
+ ++D + +F+ +G + + E+ DK + +GF F+TF+ V++ + + G
Sbjct: 84 REDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNG 143
Query: 340 KEVDVKRATPKPD 378
DV++ K +
Sbjct: 144 HRCDVRKGLSKDE 156
Score = 52.8 bits (121), Expect = 1e-07
Identities = 24/65 (36%), Positives = 37/65 (56%)
Frame = +1
Query: 184 IKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLKTPKQTIGGKEVDVKRA 363
++ F+S FG I ++ + D T + +GF F+TF + V+ +K I GK VD KRA
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRA 60
Query: 364 TPKPD 378
P+ D
Sbjct: 61 VPRDD 65
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 75.4 bits (177), Expect = 2e-14
Identities = 37/133 (27%), Positives = 65/133 (48%), Gaps = 11/133 (8%)
Frame = +1
Query: 13 RSRGFAFIVFKAPDSIDKVMAAGEHTINSKKVDPKKAKARHGK-----------IFVGGL 159
RSRGF F+ F +D M H I+ K VDPK+A R K ++V G+
Sbjct: 62 RSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGV 121
Query: 160 SSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLKTPKQTIGG 339
+ ++D + +F+ +G + + E+ DK + +GF F+TF+ V++ + + G
Sbjct: 122 REDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNG 181
Query: 340 KEVDVKRATPKPD 378
DV++ K +
Sbjct: 182 HRCDVRKGLSKDE 194
Score = 72.5 bits (170), Expect = 2e-13
Identities = 34/80 (42%), Positives = 49/80 (61%)
Frame = +1
Query: 139 KIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLKT 318
KIFVGGL+S +DD ++ F+S FG I ++ + D T + +GF F+TF + V+ +K
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 83
Query: 319 PKQTIGGKEVDVKRATPKPD 378
I GK VD KRA P+ D
Sbjct: 84 RPHIIDGKTVDPKRAVPRDD 103
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 75.4 bits (177), Expect = 2e-14
Identities = 37/133 (27%), Positives = 65/133 (48%), Gaps = 11/133 (8%)
Frame = +1
Query: 13 RSRGFAFIVFKAPDSIDKVMAAGEHTINSKKVDPKKAKARHGK-----------IFVGGL 159
RSRGF F+ F +D M H I+ K VDPK+A R K ++V G+
Sbjct: 62 RSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGV 121
Query: 160 SSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLKTPKQTIGG 339
+ ++D + +F+ +G + + E+ DK + +GF F+TF+ V++ + + G
Sbjct: 122 REDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNG 181
Query: 340 KEVDVKRATPKPD 378
DV++ K +
Sbjct: 182 HRCDVRKGLSKDE 194
Score = 72.5 bits (170), Expect = 2e-13
Identities = 34/80 (42%), Positives = 49/80 (61%)
Frame = +1
Query: 139 KIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLKT 318
KIFVGGL+S +DD ++ F+S FG I ++ + D T + +GF F+TF + V+ +K
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 83
Query: 319 PKQTIGGKEVDVKRATPKPD 378
I GK VD KRA P+ D
Sbjct: 84 RPHIIDGKTVDPKRAVPRDD 103
>AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical
protein H28G03.1b protein.
Length = 315
Score = 62.1 bits (144), Expect = 2e-10
Identities = 27/78 (34%), Positives = 45/78 (57%)
Frame = +1
Query: 139 KIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLKT 318
K+F+GGLS + +D+++ N+FS +G +++ + D +GF F+TF S +
Sbjct: 50 KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMND 109
Query: 319 PKQTIGGKEVDVKRATPK 372
+GGK VD KRA P+
Sbjct: 110 RPHKLGGKTVDSKRAIPR 127
Score = 37.9 bits (84), Expect = 0.004
Identities = 32/142 (22%), Positives = 64/142 (45%), Gaps = 21/142 (14%)
Frame = +1
Query: 16 SRGFAFIVFKAPDSIDKVMAAGEHTINSKKVDPKKAKARHG------------------K 141
SRGF F+ F + S + M H + K VD K+A R K
Sbjct: 89 SRGFGFVTFASIFSAESAMNDRPHKLGGKTVDSKRAIPREQMSSMIPPPFFETDPAPGCK 148
Query: 142 IFVGGLSSEI-SDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELL-- 312
+ + G+++ + S D ++ +F FG + +VE+ Q +G F+ +E ++ + L
Sbjct: 149 LLLNGITNGVHSVDSLRVYFETFGTLDQVEI-----LGQPRGLGFVIYEDKESADRCLAH 203
Query: 313 KTPKQTIGGKEVDVKRATPKPD 378
+ + + ++++V+ T P+
Sbjct: 204 NSGRHIVNERKIEVRVFTKHPN 225
>AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical
protein H28G03.1c protein.
Length = 335
Score = 62.1 bits (144), Expect = 2e-10
Identities = 27/78 (34%), Positives = 45/78 (57%)
Frame = +1
Query: 139 KIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLKT 318
K+F+GGLS + +D+++ N+FS +G +++ + D +GF F+TF S +
Sbjct: 70 KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMND 129
Query: 319 PKQTIGGKEVDVKRATPK 372
+GGK VD KRA P+
Sbjct: 130 RPHKLGGKTVDSKRAIPR 147
Score = 37.9 bits (84), Expect = 0.004
Identities = 32/142 (22%), Positives = 64/142 (45%), Gaps = 21/142 (14%)
Frame = +1
Query: 16 SRGFAFIVFKAPDSIDKVMAAGEHTINSKKVDPKKAKARHG------------------K 141
SRGF F+ F + S + M H + K VD K+A R K
Sbjct: 109 SRGFGFVTFASIFSAESAMNDRPHKLGGKTVDSKRAIPREQMSSMIPPPFFETDPAPGCK 168
Query: 142 IFVGGLSSEI-SDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELL-- 312
+ + G+++ + S D ++ +F FG + +VE+ Q +G F+ +E ++ + L
Sbjct: 169 LLLNGITNGVHSVDSLRVYFETFGTLDQVEI-----LGQPRGLGFVIYEDKESADRCLAH 223
Query: 313 KTPKQTIGGKEVDVKRATPKPD 378
+ + + ++++V+ T P+
Sbjct: 224 NSGRHIVNERKIEVRVFTKHPN 245
>AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical
protein H28G03.1a protein.
Length = 336
Score = 62.1 bits (144), Expect = 2e-10
Identities = 27/78 (34%), Positives = 45/78 (57%)
Frame = +1
Query: 139 KIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLKT 318
K+F+GGLS + +D+++ N+FS +G +++ + D +GF F+TF S +
Sbjct: 71 KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMND 130
Query: 319 PKQTIGGKEVDVKRATPK 372
+GGK VD KRA P+
Sbjct: 131 RPHKLGGKTVDSKRAIPR 148
Score = 37.9 bits (84), Expect = 0.004
Identities = 32/142 (22%), Positives = 64/142 (45%), Gaps = 21/142 (14%)
Frame = +1
Query: 16 SRGFAFIVFKAPDSIDKVMAAGEHTINSKKVDPKKAKARHG------------------K 141
SRGF F+ F + S + M H + K VD K+A R K
Sbjct: 110 SRGFGFVTFASIFSAESAMNDRPHKLGGKTVDSKRAIPREQMSSMIPPPFFETDPAPGCK 169
Query: 142 IFVGGLSSEI-SDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELL-- 312
+ + G+++ + S D ++ +F FG + +VE+ Q +G F+ +E ++ + L
Sbjct: 170 LLLNGITNGVHSVDSLRVYFETFGTLDQVEI-----LGQPRGLGFVIYEDKESADRCLAH 224
Query: 313 KTPKQTIGGKEVDVKRATPKPD 378
+ + + ++++V+ T P+
Sbjct: 225 NSGRHIVNERKIEVRVFTKHPN 246
>Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical
protein F44G4.4a protein.
Length = 411
Score = 51.6 bits (118), Expect = 3e-07
Identities = 32/132 (24%), Positives = 61/132 (46%), Gaps = 9/132 (6%)
Frame = +1
Query: 10 GRSRGFAFIVFKAPDSIDKVMAAGEHTINSKKVDPKKAKARH-------GKIFVGGLSSE 168
G S+GF F+ + +KV+A +H I+ ++ D K R +IFVG L+ +
Sbjct: 210 GNSKGFGFVRMSSVGEQNKVLAIPQHMIDGRRCDVKVPDGRDKQGRPSISRIFVGRLTDK 269
Query: 169 ISDDEIKNFFSNFG-NIIEVEMPFDK-TKNQRKGFCFITFESEQVVNELLKTPKQTIGGK 342
+ + +++ F + + IE + D +GF F+T S + ++ T+ G
Sbjct: 270 VDEHQLRKVFGDEAKSYIETAVVTDVFIPKPFRGFAFVTLSSAEAAERIVSKGSLTVNGL 329
Query: 343 EVDVKRATPKPD 378
V + A P+ +
Sbjct: 330 SVGLSIAQPREE 341
Score = 39.1 bits (87), Expect = 0.002
Identities = 20/72 (27%), Positives = 37/72 (51%)
Frame = +1
Query: 142 IFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLKTP 321
+ V G+ + +D+ + +F + G ++ E+ K+ KGF F+ S N++L P
Sbjct: 175 LIVLGVDFKTTDECFQKYFEDIGTVVFCEIK-RKSDGNSKGFGFVRMSSVGEQNKVLAIP 233
Query: 322 KQTIGGKEVDVK 357
+ I G+ DVK
Sbjct: 234 QHMIDGRRCDVK 245
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 51.6 bits (118), Expect = 3e-07
Identities = 35/128 (27%), Positives = 62/128 (48%), Gaps = 9/128 (7%)
Frame = +1
Query: 16 SRGFAFIVFKAPDSIDKVM-AAGEHTINSKKV-------DPKKAKARHGKIFVGGLSSEI 171
S G+A++ F+ P ++ M ++ K + DP ++ G IF+ L I
Sbjct: 72 SLGYAYVNFQQPADAERAMDTMNFEALHGKPMRIMWSQRDPAMRRSGAGNIFIKNLDKVI 131
Query: 172 SDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQVV-NELLKTPKQTIGGKEV 348
+ I + FS FGNI+ ++ D+ KG+ F+ FE+E+ N + K + GK+V
Sbjct: 132 DNKSIYDTFSLFGNILSCKVAIDE-DGFSKGYGFVHFETEEAAQNAIQKVNGMLLAGKKV 190
Query: 349 DVKRATPK 372
V + P+
Sbjct: 191 FVGKFQPR 198
Score = 37.1 bits (82), Expect = 0.007
Identities = 21/80 (26%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Frame = +1
Query: 142 IFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFES-EQVVNELLKT 318
++V L + DD +K F ++GNI ++ D+ + KGF F+ FE E+ + + +
Sbjct: 319 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTDE-NGRSKGFGFVCFEKPEEATSAVTEM 377
Query: 319 PKQTIGGKEVDVKRATPKPD 378
+ + K + V K D
Sbjct: 378 NSKMVCSKPLYVAIGQRKED 397
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 51.6 bits (118), Expect = 3e-07
Identities = 35/128 (27%), Positives = 62/128 (48%), Gaps = 9/128 (7%)
Frame = +1
Query: 16 SRGFAFIVFKAPDSIDKVM-AAGEHTINSKKV-------DPKKAKARHGKIFVGGLSSEI 171
S G+A++ F+ P ++ M ++ K + DP ++ G IF+ L I
Sbjct: 72 SLGYAYVNFQQPADAERAMDTMNFEALHGKPMRIMWSQRDPAMRRSGAGNIFIKNLDKVI 131
Query: 172 SDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQVV-NELLKTPKQTIGGKEV 348
+ I + FS FGNI+ ++ D+ KG+ F+ FE+E+ N + K + GK+V
Sbjct: 132 DNKSIYDTFSLFGNILSCKVAIDE-DGFSKGYGFVHFETEEAAQNAIQKVNGMLLAGKKV 190
Query: 349 DVKRATPK 372
V + P+
Sbjct: 191 FVGKFQPR 198
Score = 38.7 bits (86), Expect = 0.002
Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Frame = +1
Query: 142 IFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFES-EQVVNELLKT 318
++V L + DD +K F ++GNI ++ D+ + KGF F+ FE E+ + + +
Sbjct: 319 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTDE-NGRSKGFGFVCFEKPEEATSAVTEM 377
Query: 319 PKQTIGGKEVDVKRATPKPD 378
+ + K + V A K D
Sbjct: 378 NSKMVCSKPLYVAIAQRKED 397
>AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor
protein 12 protein.
Length = 248
Score = 50.4 bits (115), Expect = 7e-07
Identities = 24/75 (32%), Positives = 37/75 (49%)
Frame = +1
Query: 139 KIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLKT 318
KIFVGGL SD + +F FG+I E + D+ + +G+ F+T + K
Sbjct: 36 KIFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTMKDRASAERACKD 95
Query: 319 PKQTIGGKEVDVKRA 363
P I G++ +V A
Sbjct: 96 PNPIIDGRKANVNLA 110
>Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical
protein F11A10.7 protein.
Length = 394
Score = 49.6 bits (113), Expect = 1e-06
Identities = 35/116 (30%), Positives = 59/116 (50%), Gaps = 7/116 (6%)
Frame = +1
Query: 31 FIVFKAPDSIDKVMAAG-----EHTINSKKVDPKKAK-ARHGKIFVGGLSSEISDDEIKN 192
++ F A +S++K + +H I KV KK + + IFVG L EI++D +
Sbjct: 205 YVKFGAEESVEKALKYNGTKLDDHVIRVDKVGSKKKEFGKDMAIFVGNLPFEITEDALIT 264
Query: 193 FFS-NFGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLKTPKQTIGGKEVDVK 357
FFS G + V + DK + KGF F+ F+ + V+ L +TI ++ D++
Sbjct: 265 FFSAQIGPVEAVRIVRDKDTGKGKGFAFVNFKQDSSVS--LALSMETIKMEKRDLR 318
Score = 27.9 bits (59), Expect = 4.4
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +1
Query: 142 IFVGGLSSEISDDEIKNFFSNFGNIIEVEM 231
+FVG + +++ ++ FS+FG I V M
Sbjct: 145 VFVGNMPLTMNEKSVRRIFSDFGTISSVRM 174
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 48.8 bits (111), Expect = 2e-06
Identities = 26/89 (29%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
Frame = +1
Query: 115 KKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITF-ESE 291
K +RH +FVG L SEI +++ F FG + E ++ D N+ KG+ F+++ E
Sbjct: 125 KPETSRHFHVFVGDLCSEIDSTKLREAFVKFGEVSEAKIIRDNNTNKGKGYGFVSYPRRE 184
Query: 292 QVVNELLKTPKQTIGGKEVDVKRATPKPD 378
+ + +G + + AT KPD
Sbjct: 185 DAERAIDEMNGAWLGRRTIRTNWATRKPD 213
Score = 33.5 bits (73), Expect = 0.088
Identities = 25/91 (27%), Positives = 45/91 (49%), Gaps = 3/91 (3%)
Frame = +1
Query: 85 HTINSKKVDP--KKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQR 258
H + K D +A A + ++VG +++ + +DEI+ F FG I EV +
Sbjct: 237 HNQSEKTYDEIFNQAAADNTSVYVGNIAN-LGEDEIRRAFDRFGPINEVR------TFKI 289
Query: 259 KGFCFITFES-EQVVNELLKTPKQTIGGKEV 348
+G+ F+ FE+ E +++ IGG+ V
Sbjct: 290 QGYAFVKFETKESAARAIVQMNNADIGGQIV 320
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 48.8 bits (111), Expect = 2e-06
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Frame = +1
Query: 109 DPKKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFES 288
DP ++ G IF+ L I + I + FS FGNI+ ++ D+ KG+ F+ FE+
Sbjct: 48 DPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDE-DGFSKGYGFVHFET 106
Query: 289 EQVV-NELLKTPKQTIGGKEVDVKRATPK 372
E+ N + K + GK+V V + P+
Sbjct: 107 EEAAQNAIQKVNGMLLAGKKVFVGKFQPR 135
Score = 38.7 bits (86), Expect = 0.002
Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Frame = +1
Query: 142 IFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFES-EQVVNELLKT 318
++V L + DD +K F ++GNI ++ D+ + KGF F+ FE E+ + + +
Sbjct: 256 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTDE-NGRSKGFGFVCFEKPEEATSAVTEM 314
Query: 319 PKQTIGGKEVDVKRATPKPD 378
+ + K + V A K D
Sbjct: 315 NSKMVCSKPLYVAIAQRKED 334
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 48.4 bits (110), Expect = 3e-06
Identities = 19/58 (32%), Positives = 35/58 (60%)
Frame = +1
Query: 142 IFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLK 315
+FVG +S ++S+D I++ FS GN++ ++M D+ + KG+ FI F Q ++
Sbjct: 20 VFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEFPDIQTAEVAIR 77
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 48.4 bits (110), Expect = 3e-06
Identities = 23/83 (27%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Frame = +1
Query: 130 RHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITF-ESEQVVNE 306
RH +FVG LSSE+ + +++ F FG++ + ++ D + KG+ F+++ + E+
Sbjct: 20 RHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERA 79
Query: 307 LLKTPKQTIGGKEVDVKRATPKP 375
+ + Q +G + + AT KP
Sbjct: 80 IEQMNGQWLGRRTIRTNWATRKP 102
Score = 35.5 bits (78), Expect = 0.022
Identities = 19/70 (27%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Frame = +1
Query: 142 IFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFES-EQVVNELLKT 318
++VG ++S +++DEI+ F++FG I EV + + +G+ F+ F++ + +++
Sbjct: 130 VYVGNIAS-LTEDEIRQGFASFGRITEVRI------FKMQGYAFVKFDNKDAAAKAIVQM 182
Query: 319 PKQTIGGKEV 348
Q +GG+ V
Sbjct: 183 NNQDVGGQLV 192
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 48.4 bits (110), Expect = 3e-06
Identities = 23/83 (27%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Frame = +1
Query: 130 RHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITF-ESEQVVNE 306
RH +FVG LSSE+ + +++ F FG++ + ++ D + KG+ F+++ + E+
Sbjct: 30 RHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERA 89
Query: 307 LLKTPKQTIGGKEVDVKRATPKP 375
+ + Q +G + + AT KP
Sbjct: 90 IEQMNGQWLGRRTIRTNWATRKP 112
Score = 35.5 bits (78), Expect = 0.022
Identities = 19/70 (27%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Frame = +1
Query: 142 IFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFES-EQVVNELLKT 318
++VG ++S +++DEI+ F++FG I EV + + +G+ F+ F++ + +++
Sbjct: 140 VYVGNIAS-LTEDEIRQGFASFGRITEVRI------FKMQGYAFVKFDNKDAAAKAIVQM 192
Query: 319 PKQTIGGKEV 348
Q +GG+ V
Sbjct: 193 NNQDVGGQLV 202
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 48.4 bits (110), Expect = 3e-06
Identities = 23/83 (27%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Frame = +1
Query: 130 RHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITF-ESEQVVNE 306
RH +FVG LSSE+ + +++ F FG++ + ++ D + KG+ F+++ + E+
Sbjct: 133 RHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERA 192
Query: 307 LLKTPKQTIGGKEVDVKRATPKP 375
+ + Q +G + + AT KP
Sbjct: 193 IEQMNGQWLGRRTIRTNWATRKP 215
Score = 35.5 bits (78), Expect = 0.022
Identities = 19/70 (27%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Frame = +1
Query: 142 IFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFES-EQVVNELLKT 318
++VG ++S +++DEI+ F++FG I EV + + +G+ F+ F++ + +++
Sbjct: 243 VYVGNIAS-LTEDEIRQGFASFGRITEVRI------FKMQGYAFVKFDNKDAAAKAIVQM 295
Query: 319 PKQTIGGKEV 348
Q +GG+ V
Sbjct: 296 NNQDVGGQLV 305
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 48.4 bits (110), Expect = 3e-06
Identities = 23/83 (27%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Frame = +1
Query: 130 RHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITF-ESEQVVNE 306
RH +FVG LSSE+ + +++ F FG++ + ++ D + KG+ F+++ + E+
Sbjct: 101 RHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERA 160
Query: 307 LLKTPKQTIGGKEVDVKRATPKP 375
+ + Q +G + + AT KP
Sbjct: 161 IEQMNGQWLGRRTIRTNWATRKP 183
Score = 35.5 bits (78), Expect = 0.022
Identities = 19/70 (27%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Frame = +1
Query: 142 IFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFES-EQVVNELLKT 318
++VG ++S +++DEI+ F++FG I EV + + +G+ F+ F++ + +++
Sbjct: 211 VYVGNIAS-LTEDEIRQGFASFGRITEVRI------FKMQGYAFVKFDNKDAAAKAIVQM 263
Query: 319 PKQTIGGKEV 348
Q +GG+ V
Sbjct: 264 NNQDVGGQLV 273
Score = 31.1 bits (67), Expect = 0.47
Identities = 11/36 (30%), Positives = 23/36 (63%)
Frame = +1
Query: 142 IFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTK 249
++VG L S +++D I F+ G++ + ++ FD+ K
Sbjct: 48 LYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDEMK 83
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 47.6 bits (108), Expect = 5e-06
Identities = 19/70 (27%), Positives = 43/70 (61%)
Frame = +1
Query: 85 HTINSKKVDPKKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKG 264
H+ + ++ + ++H +FVG LS ++S++ +K+ F+ FG + E ++ D + KG
Sbjct: 118 HSASEPPMEMRIDTSKHFHVFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKG 177
Query: 265 FCFITFESEQ 294
+ F++F ++Q
Sbjct: 178 YGFVSFPNKQ 187
>U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (deleted
in azoospermia)homolog protein 1 protein.
Length = 498
Score = 47.2 bits (107), Expect = 7e-06
Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Frame = +1
Query: 139 KIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLK- 315
+IFVGG + ++ E++ F F + +V+M Q KG+ FITFE+E E+ K
Sbjct: 67 RIFVGGFPTSTTETELREHFEKFFAVKDVKM-VKSLDGQSKGYGFITFETEDQAEEIRKL 125
Query: 316 TPKQ 327
TPKQ
Sbjct: 126 TPKQ 129
>AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein.
Length = 499
Score = 47.2 bits (107), Expect = 7e-06
Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Frame = +1
Query: 139 KIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLK- 315
+IFVGG + ++ E++ F F + +V+M Q KG+ FITFE+E E+ K
Sbjct: 68 RIFVGGFPTSTTETELREHFEKFFAVKDVKM-VKSLDGQSKGYGFITFETEDQAEEIRKL 126
Query: 316 TPKQ 327
TPKQ
Sbjct: 127 TPKQ 130
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 46.8 bits (106), Expect = 9e-06
Identities = 33/128 (25%), Positives = 60/128 (46%), Gaps = 9/128 (7%)
Frame = +1
Query: 16 SRGFAFIVFKAPDSIDKVM-AAGEHTINSKKV-------DPKKAKARHGKIFVGGLSSEI 171
S G+A++ F+ P ++ + I+ + + DP +A +G IF+ L I
Sbjct: 97 SLGYAYVNFQQPADAERALDTMNFEVIHGRPMRIMWSQRDPAARRAGNGNIFIKNLDRVI 156
Query: 172 SDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELL-KTPKQTIGGKEV 348
+ + + FS FGNI+ ++ D N KG+ F+ FE+E + K + K+V
Sbjct: 157 DNKSVYDTFSLFGNILSCKVATDDEGNS-KGYGFVHFETEHSAQTAIEKVNGMLLSDKKV 215
Query: 349 DVKRATPK 372
V + P+
Sbjct: 216 YVGKFQPR 223
Score = 42.3 bits (95), Expect = 2e-04
Identities = 23/80 (28%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Frame = +1
Query: 142 IFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFES-EQVVNELLKT 318
++V + +++DD +++ FS+FG I ++ D+ + KGF F+ FE E+ +
Sbjct: 345 LYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDE-NGRSKGFGFVCFEKPEEATAAVTDM 403
Query: 319 PKQTIGGKEVDVKRATPKPD 378
+ IG K + V A K D
Sbjct: 404 NSKMIGAKPLYVALAQRKED 423
Score = 34.7 bits (76), Expect = 0.038
Identities = 26/122 (21%), Positives = 52/122 (42%), Gaps = 14/122 (11%)
Frame = +1
Query: 10 GRSRGFAFIVFK----APDSIDKV--MAAGEHTINSKKVDPKKAKAR--------HGKIF 147
G S+G+ F+ F+ A +I+KV M + + K P+ + + + +F
Sbjct: 182 GNSKGYGFVHFETEHSAQTAIEKVNGMLLSDKKVYVGKFQPRAQRMKELGESGLKYTNVF 241
Query: 148 VGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLKTPKQ 327
V + +++ FS FG I + D + + KGF F+ F + + ++
Sbjct: 242 VKNFGEHLDQEKLSAMFSKFGEITSAVVMTD-AQGKPKGFGFVAFADQDAAGQAVEKLND 300
Query: 328 TI 333
+I
Sbjct: 301 SI 302
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 46.8 bits (106), Expect = 9e-06
Identities = 33/128 (25%), Positives = 60/128 (46%), Gaps = 9/128 (7%)
Frame = +1
Query: 16 SRGFAFIVFKAPDSIDKVM-AAGEHTINSKKV-------DPKKAKARHGKIFVGGLSSEI 171
S G+A++ F+ P ++ + I+ + + DP +A +G IF+ L I
Sbjct: 97 SLGYAYVNFQQPADAERALDTMNFEVIHGRPMRIMWSQRDPAARRAGNGNIFIKNLDRVI 156
Query: 172 SDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELL-KTPKQTIGGKEV 348
+ + + FS FGNI+ ++ D N KG+ F+ FE+E + K + K+V
Sbjct: 157 DNKSVYDTFSLFGNILSCKVATDDEGNS-KGYGFVHFETEHSAQTAIEKVNGMLLSDKKV 215
Query: 349 DVKRATPK 372
V + P+
Sbjct: 216 YVGKFQPR 223
Score = 42.3 bits (95), Expect = 2e-04
Identities = 23/80 (28%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Frame = +1
Query: 142 IFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFES-EQVVNELLKT 318
++V + +++DD +++ FS+FG I ++ D+ + KGF F+ FE E+ +
Sbjct: 345 LYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDE-NGRSKGFGFVCFEKPEEATAAVTDM 403
Query: 319 PKQTIGGKEVDVKRATPKPD 378
+ IG K + V A K D
Sbjct: 404 NSKMIGAKPLYVALAQRKED 423
Score = 34.7 bits (76), Expect = 0.038
Identities = 26/122 (21%), Positives = 52/122 (42%), Gaps = 14/122 (11%)
Frame = +1
Query: 10 GRSRGFAFIVFK----APDSIDKV--MAAGEHTINSKKVDPKKAKAR--------HGKIF 147
G S+G+ F+ F+ A +I+KV M + + K P+ + + + +F
Sbjct: 182 GNSKGYGFVHFETEHSAQTAIEKVNGMLLSDKKVYVGKFQPRAQRMKELGESGLKYTNVF 241
Query: 148 VGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLKTPKQ 327
V + +++ FS FG I + D + + KGF F+ F + + ++
Sbjct: 242 VKNFGEHLDQEKLSAMFSKFGEITSAVVMTD-AQGKPKGFGFVAFADQDAAGQAVEKLND 300
Query: 328 TI 333
+I
Sbjct: 301 SI 302
>Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical
protein C50B8.1 protein.
Length = 114
Score = 44.4 bits (100), Expect = 5e-05
Identities = 23/94 (24%), Positives = 44/94 (46%)
Frame = +1
Query: 88 TINSKKVDPKKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGF 267
T N K+ + K +++ + +++++F +G+I V M +D +GF
Sbjct: 9 TTNISKLIEARPKNTGQTVYLTHVKWVTGKSQLEHYFKRYGSIQSVNMFYDPDTGLHRGF 68
Query: 268 CFITFESEQVVNELLKTPKQTIGGKEVDVKRATP 369
ITF+S+ N+ ++ I G VDV+ P
Sbjct: 69 ASITFDSKDGANKAIEQRPHVIDGDRVDVEPYIP 102
Score = 29.1 bits (62), Expect = 1.9
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +1
Query: 10 GRSRGFAFIVFKAPDSIDKVMAAGEHTINSKKVD 111
G RGFA I F + D +K + H I+ +VD
Sbjct: 63 GLHRGFASITFDSKDGANKAIEQRPHVIDGDRVD 96
>Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical
protein F22B5.2 protein.
Length = 256
Score = 43.6 bits (98), Expect = 8e-05
Identities = 18/47 (38%), Positives = 28/47 (59%)
Frame = +1
Query: 148 VGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFES 288
V L E+++DE+++ F G +I + + DK KGF F+TFES
Sbjct: 180 VTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFES 226
>AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 43.6 bits (98), Expect = 8e-05
Identities = 20/61 (32%), Positives = 32/61 (52%)
Frame = +1
Query: 133 HGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELL 312
H +F+GGL ++ +EI FS FG ++ V + D+ KG +TFE + N L
Sbjct: 318 HRTVFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFNRAL 377
Query: 313 K 315
+
Sbjct: 378 E 378
Score = 35.1 bits (77), Expect = 0.029
Identities = 22/84 (26%), Positives = 37/84 (44%), Gaps = 8/84 (9%)
Frame = +1
Query: 85 HTINSKKVDPKKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQR-- 258
HT+ + + K+FVGG+S ++ I FF FG + V+ P + N R
Sbjct: 188 HTVVKNHRNENNQRVVSNKVFVGGISHMMNRKIINKFFGQFGTVF-VDWPVKQKPNSRGK 246
Query: 259 ------KGFCFITFESEQVVNELL 312
+ F+ + EQ V +L+
Sbjct: 247 SIAIGSYSYLFLVYSDEQSVIKLM 270
>AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 43.6 bits (98), Expect = 8e-05
Identities = 20/61 (32%), Positives = 32/61 (52%)
Frame = +1
Query: 133 HGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELL 312
H +F+GGL ++ +EI FS FG ++ V + D+ KG +TFE + N L
Sbjct: 318 HRTVFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFNRAL 377
Query: 313 K 315
+
Sbjct: 378 E 378
Score = 35.1 bits (77), Expect = 0.029
Identities = 22/84 (26%), Positives = 37/84 (44%), Gaps = 8/84 (9%)
Frame = +1
Query: 85 HTINSKKVDPKKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQR-- 258
HT+ + + K+FVGG+S ++ I FF FG + V+ P + N R
Sbjct: 188 HTVVKNHRNENNQRVVSNKVFVGGISHMMNRKIINKFFGQFGTVF-VDWPVKQKPNSRGK 246
Query: 259 ------KGFCFITFESEQVVNELL 312
+ F+ + EQ V +L+
Sbjct: 247 SIAIGSYSYLFLVYSDEQSVIKLM 270
>AC024810-13|AAK68518.1| 405|Caenorhabditis elegans Feminization of
germline protein1, isoform a protein.
Length = 405
Score = 43.6 bits (98), Expect = 8e-05
Identities = 20/61 (32%), Positives = 32/61 (52%)
Frame = +1
Query: 133 HGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELL 312
H +F+GGL ++ +EI FS FG ++ V + D+ KG +TFE + N L
Sbjct: 104 HRTVFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFNRAL 163
Query: 313 K 315
+
Sbjct: 164 E 164
>AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization of
germline protein1, isoform b protein.
Length = 619
Score = 43.6 bits (98), Expect = 8e-05
Identities = 20/61 (32%), Positives = 32/61 (52%)
Frame = +1
Query: 133 HGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELL 312
H +F+GGL ++ +EI FS FG ++ V + D+ KG +TFE + N L
Sbjct: 318 HRTVFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFNRAL 377
Query: 313 K 315
+
Sbjct: 378 E 378
Score = 35.1 bits (77), Expect = 0.029
Identities = 22/84 (26%), Positives = 37/84 (44%), Gaps = 8/84 (9%)
Frame = +1
Query: 85 HTINSKKVDPKKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQR-- 258
HT+ + + K+FVGG+S ++ I FF FG + V+ P + N R
Sbjct: 188 HTVVKNHRNENNQRVVSNKVFVGGISHMMNRKIINKFFGQFGTVF-VDWPVKQKPNSRGK 246
Query: 259 ------KGFCFITFESEQVVNELL 312
+ F+ + EQ V +L+
Sbjct: 247 SIAIGSYSYLFLVYSDEQSVIKLM 270
>Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical
protein B0035.12 protein.
Length = 836
Score = 42.7 bits (96), Expect = 1e-04
Identities = 36/131 (27%), Positives = 60/131 (45%), Gaps = 14/131 (10%)
Frame = +1
Query: 19 RGFAFIVF----KAPDSI--DKVMAAGEHTINSKKVDPKK-------AKARHGKIFVGGL 159
RGFA++V KA ++ D+V G S DP+K K+FV +
Sbjct: 632 RGFAYVVMENDQKAQQALLKDRVPVKGRPMFISAN-DPEKRVGFKFSTTLEKSKVFVRNV 690
Query: 160 SSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLKT-PKQTIG 336
+ +DDE+K FS FG + V K + KG F+ F++E + + + K +
Sbjct: 691 HFQATDDELKALFSKFGTVTSVRRVTHK-DGKPKGIAFVDFDTEASAQKCVASGDKLMLR 749
Query: 337 GKEVDVKRATP 369
+E++V + P
Sbjct: 750 ERELEVALSNP 760
>Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical
protein R10E4.2b protein.
Length = 409
Score = 42.3 bits (95), Expect = 2e-04
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +1
Query: 142 IFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQ 294
+++ GL +DD ++ S +GNI + DK N KG+ F+ FES Q
Sbjct: 109 LYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQ 159
>Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical
protein R10E4.2a protein.
Length = 357
Score = 42.3 bits (95), Expect = 2e-04
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +1
Query: 142 IFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQ 294
+++ GL +DD ++ S +GNI + DK N KG+ F+ FES Q
Sbjct: 83 LYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQ 133
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 42.3 bits (95), Expect = 2e-04
Identities = 15/51 (29%), Positives = 32/51 (62%)
Frame = +1
Query: 142 IFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQ 294
I++GGLS +S+ ++ FS +G ++ + + DK + KGF F+ ++ ++
Sbjct: 40 IYIGGLSYALSEGDVIAVFSQYGEVMNINLIRDKDTGKSKGFAFLCYKDQR 90
>AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 42.3 bits (95), Expect = 2e-04
Identities = 19/81 (23%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Frame = +1
Query: 130 RHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFE-SEQVVNE 306
R ++VGG + ++++ + F FG+++ + +P D + +GF F+ F+ +E
Sbjct: 9 RKRTLYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEFDMAEDAAMA 68
Query: 307 LLKTPKQTIGGKEVDVKRATP 369
+ + + GK + V A P
Sbjct: 69 IDNMNESELFGKTIRVNFARP 89
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 41.9 bits (94), Expect = 3e-04
Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Frame = +1
Query: 142 IFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLKTP 321
I+VGGL ++S+ + G ++ V MP D+ +GF F+ F E+ + +K
Sbjct: 15 IYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKIL 74
Query: 322 KQ-TIGGKEVDVKRAT 366
+ GK + V +A+
Sbjct: 75 NMIKLYGKPIKVNKAS 90
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 41.9 bits (94), Expect = 3e-04
Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Frame = +1
Query: 142 IFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLKTP 321
I+VGGL ++S+ + G ++ V MP D+ +GF F+ F E+ + +K
Sbjct: 25 IYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKIL 84
Query: 322 KQ-TIGGKEVDVKRAT 366
+ GK + V +A+
Sbjct: 85 NMIKLYGKPIKVNKAS 100
>Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical
protein C17E4.5 protein.
Length = 205
Score = 41.5 bits (93), Expect = 3e-04
Identities = 21/88 (23%), Positives = 43/88 (48%), Gaps = 1/88 (1%)
Frame = +1
Query: 115 KKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQ 294
+KA+A ++VG + + +EI+ F G++ V + D+ KGF ++ F ++
Sbjct: 71 EKAEADAKSVYVGNVDYGATAEEIEQHFHGCGSVSRVTIQCDRFSGHPKGFAYVEFTEKE 130
Query: 295 VVNELLKTPKQTIGGKEVDV-KRATPKP 375
+ L + G+++ V + T KP
Sbjct: 131 GMQNALAMTDSLLRGRQIKVDPKRTNKP 158
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 41.1 bits (92), Expect = 4e-04
Identities = 15/50 (30%), Positives = 29/50 (58%)
Frame = +1
Query: 142 IFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESE 291
++VG + ++D++ N+FS GN+ V + D+ + +GF F+ F E
Sbjct: 6 VYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTEE 55
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 41.1 bits (92), Expect = 4e-04
Identities = 17/50 (34%), Positives = 29/50 (58%)
Frame = +1
Query: 142 IFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESE 291
++VG + +++E+ NFFS+ G I V + D+ + +GF FI F E
Sbjct: 7 VYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEE 56
>Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical
protein R07E5.14 protein.
Length = 142
Score = 41.1 bits (92), Expect = 4e-04
Identities = 18/72 (25%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Frame = +1
Query: 142 IFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLKTP 321
+FV + E ++D++ + FS +G I + + D+ KG+ + +E+++ NE +
Sbjct: 57 VFVTNIHEEATEDDVHDKFSEYGKIKNIHLNLDRRTGFLKGYALVEYETQKEANEAIDQS 116
Query: 322 KQT-IGGKEVDV 354
T + G+ V V
Sbjct: 117 NDTDLLGQNVKV 128
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 41.1 bits (92), Expect = 4e-04
Identities = 26/105 (24%), Positives = 47/105 (44%), Gaps = 5/105 (4%)
Frame = +1
Query: 10 GRSRGFAFIVF-KAPDSIDKVMAAGEHTINSKKVDPKKAKARHGKIFVGGLSSEISDDEI 186
G SRG+AF+ + D+ H I++ K + ++F+G + S DEI
Sbjct: 238 GASRGYAFVTYCNKEDAAAAAKTYDGHEISTGKPLKVNVSIANTRLFIGNIPKTKSKDEI 297
Query: 187 ----KNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNEL 309
K ++I +P D K + +GFCF+ F + +++
Sbjct: 298 LEELKTHAEGVVDVIVYSVP-DNEKIKNRGFCFVDFIDHKTASDI 341
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 40.7 bits (91), Expect = 6e-04
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Frame = +1
Query: 142 IFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFES-EQVVNELLKT 318
+FV LSS+ D + FS FG I+ V++ D T+ Q KG+ F++ + + N +L
Sbjct: 376 LFVYNLSSDTDDTLLWQLFSQFGAIVNVKILRDLTQ-QCKGYAFVSMSNYTEAYNAMLSL 434
Query: 319 PKQTIGGKEVDV--KRATP 369
+ GK + V K +TP
Sbjct: 435 NGTNLAGKTLQVVFKSSTP 453
Score = 38.3 bits (85), Expect = 0.003
Identities = 23/109 (21%), Positives = 50/109 (45%), Gaps = 6/109 (5%)
Frame = +1
Query: 10 GRSRGFAFIVF-KAPDSIDKVMAAGEHTINSKKVD-----PKKAKARHGKIFVGGLSSEI 171
G+S G+ F+ + + D++ V + + +K + P + + ++V G+ +
Sbjct: 80 GQSLGYGFVNYVREEDALRAVSSFNGLRLQNKTIKVSYARPSNDQIKGSNLYVSGIPKSM 139
Query: 172 SDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLKT 318
+ E+++ F FG II + D KG F+ F+ + + +KT
Sbjct: 140 TLHELESIFRPFGQIITSRILSDNVTGLSKGVGFVRFDKKDEADVAIKT 188
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 39.9 bits (89), Expect = 0.001
Identities = 21/73 (28%), Positives = 38/73 (52%)
Frame = +1
Query: 64 KVMAAGEHTINSKKVDPKKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDK 243
KV+ H + K D + R K+F+G LS + +++ ++ F+ FG+I + + D+
Sbjct: 120 KVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQ 177
Query: 244 TKNQRKGFCFITF 282
R G F+TF
Sbjct: 178 DGKSR-GCAFVTF 189
Score = 37.9 bits (84), Expect = 0.004
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +1
Query: 139 KIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITF 282
K+FVG + + ++ + + F +G++ + DK+ KG CF+TF
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTF 103
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 39.9 bits (89), Expect = 0.001
Identities = 21/73 (28%), Positives = 38/73 (52%)
Frame = +1
Query: 64 KVMAAGEHTINSKKVDPKKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDK 243
KV+ H + K D + R K+F+G LS + +++ ++ F+ FG+I + + D+
Sbjct: 120 KVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQ 177
Query: 244 TKNQRKGFCFITF 282
R G F+TF
Sbjct: 178 DGKSR-GCAFVTF 189
Score = 37.9 bits (84), Expect = 0.004
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +1
Query: 139 KIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITF 282
K+FVG + + ++ + + F +G++ + DK+ KG CF+TF
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTF 103
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 39.9 bits (89), Expect = 0.001
Identities = 21/73 (28%), Positives = 38/73 (52%)
Frame = +1
Query: 64 KVMAAGEHTINSKKVDPKKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDK 243
KV+ H + K D + R K+F+G LS + +++ ++ F+ FG+I + + D+
Sbjct: 120 KVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQ 177
Query: 244 TKNQRKGFCFITF 282
R G F+TF
Sbjct: 178 DGKSR-GCAFVTF 189
Score = 37.9 bits (84), Expect = 0.004
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +1
Query: 139 KIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITF 282
K+FVG + + ++ + + F +G++ + DK+ KG CF+TF
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTF 103
>EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA
binding protein variantD protein.
Length = 327
Score = 39.9 bits (89), Expect = 0.001
Identities = 21/73 (28%), Positives = 38/73 (52%)
Frame = +1
Query: 64 KVMAAGEHTINSKKVDPKKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDK 243
KV+ H + K D + R K+F+G LS + +++ ++ F+ FG+I + + D+
Sbjct: 120 KVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQ 177
Query: 244 TKNQRKGFCFITF 282
R G F+TF
Sbjct: 178 DGKSR-GCAFVTF 189
Score = 37.9 bits (84), Expect = 0.004
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +1
Query: 139 KIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITF 282
K+FVG + + ++ + + F +G++ + DK+ KG CF+TF
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTF 103
>EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA
binding protein variantC protein.
Length = 378
Score = 39.9 bits (89), Expect = 0.001
Identities = 21/73 (28%), Positives = 38/73 (52%)
Frame = +1
Query: 64 KVMAAGEHTINSKKVDPKKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDK 243
KV+ H + K D + R K+F+G LS + +++ ++ F+ FG+I + + D+
Sbjct: 120 KVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQ 177
Query: 244 TKNQRKGFCFITF 282
R G F+TF
Sbjct: 178 DGKSR-GCAFVTF 189
Score = 37.9 bits (84), Expect = 0.004
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +1
Query: 139 KIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITF 282
K+FVG + + ++ + + F +G++ + DK+ KG CF+TF
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTF 103
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 39.9 bits (89), Expect = 0.001
Identities = 21/73 (28%), Positives = 38/73 (52%)
Frame = +1
Query: 64 KVMAAGEHTINSKKVDPKKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDK 243
KV+ H + K D + R K+F+G LS + +++ ++ F+ FG+I + + D+
Sbjct: 120 KVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQ 177
Query: 244 TKNQRKGFCFITF 282
R G F+TF
Sbjct: 178 DGKSR-GCAFVTF 189
Score = 37.9 bits (84), Expect = 0.004
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +1
Query: 139 KIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITF 282
K+FVG + + ++ + + F +G++ + DK+ KG CF+TF
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTF 103
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 39.5 bits (88), Expect = 0.001
Identities = 14/50 (28%), Positives = 31/50 (62%)
Frame = +1
Query: 142 IFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESE 291
++VG + + +++EI N+F+ G++ V + +D+ + +GF F+ F E
Sbjct: 8 VYVGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEFSEE 57
>AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily
assigned gene nameprotein 262 protein.
Length = 302
Score = 39.5 bits (88), Expect = 0.001
Identities = 17/79 (21%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Frame = +1
Query: 139 KIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITF-ESEQVVNELLK 315
++F G L +E+SD+ + F + + + ++ + N+ KG+ F++F +SE V + +
Sbjct: 204 RVFCGDLGNEVSDELLAKAFRKYPSFQKAKVVRESRTNKSKGYGFVSFRDSEDYVRAMRE 263
Query: 316 TPKQTIGGKEVDVKRATPK 372
+ +G + + ++++ K
Sbjct: 264 MDGKYVGNRPIKLRKSAWK 282
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 38.7 bits (86), Expect = 0.002
Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Frame = +1
Query: 142 IFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFES-EQVVNELLKT 318
++V L + DD +K F ++GNI ++ D+ + KGF F+ FE E+ + + +
Sbjct: 259 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTDE-NGRSKGFGFVCFEKPEEATSAVTEM 317
Query: 319 PKQTIGGKEVDVKRATPKPD 378
+ + K + V A K D
Sbjct: 318 NSKMVCSKPLYVAIAQRKED 337
>EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA
binding protein variantB protein.
Length = 193
Score = 37.9 bits (84), Expect = 0.004
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +1
Query: 139 KIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITF 282
K+FVG + + ++ + + F +G++ + DK+ KG CF+TF
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTF 103
Score = 34.7 bits (76), Expect = 0.038
Identities = 17/65 (26%), Positives = 33/65 (50%)
Frame = +1
Query: 64 KVMAAGEHTINSKKVDPKKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDK 243
KV+ H + K D + R K+F+G LS + +++ ++ F+ FG+I + + D+
Sbjct: 120 KVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQ 177
Query: 244 TKNQR 258
R
Sbjct: 178 DGKSR 182
>AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform a protein.
Length = 339
Score = 37.9 bits (84), Expect = 0.004
Identities = 20/89 (22%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Frame = +1
Query: 115 KKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQ 294
K AK ++ +++V + ++S+ ++K+ F FG I++ ++ T +GF ++ F +
Sbjct: 201 KDAK-KYFRVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLT 259
Query: 295 VVNELLKTPKQ-TIGGKEVDVKRATPKPD 378
+E + +GG+ + V + PD
Sbjct: 260 SQSEAIAGMNMFDLGGQYLRVGKCVTPPD 288
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 37.9 bits (84), Expect = 0.004
Identities = 20/89 (22%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Frame = +1
Query: 115 KKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQ 294
K AK ++ +++V + ++S+ ++K+ F FG I++ ++ T +GF ++ F +
Sbjct: 201 KDAK-KYFRVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLT 259
Query: 295 VVNELLKTPKQ-TIGGKEVDVKRATPKPD 378
+E + +GG+ + V + PD
Sbjct: 260 SQSEAIAGMNMFDLGGQYLRVGKCVTPPD 288
>Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical
protein C17D12.2 protein.
Length = 514
Score = 37.5 bits (83), Expect = 0.005
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +1
Query: 139 KIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITF 282
K+FVG + + + ++++ F FG I E + DK KG F+T+
Sbjct: 30 KLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTY 77
Score = 37.5 bits (83), Expect = 0.005
Identities = 22/81 (27%), Positives = 39/81 (48%)
Frame = +1
Query: 43 KAPDSIDKVMAAGEHTINSKKVDPKKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIE 222
K +++ M +S+ PK K K+F+G LS + S+DE++ F+ FG + E
Sbjct: 94 KTLPGMNRAMQVKPADTDSRPASPKD-KMDDKKLFIGMLSKQQSEDEVRALFATFGELDE 152
Query: 223 VEMPFDKTKNQRKGFCFITFE 285
V + KG F+ ++
Sbjct: 153 VTV-LRGADGASKGCAFVKYK 172
>AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative
RNA-binding protein protein.
Length = 514
Score = 37.5 bits (83), Expect = 0.005
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +1
Query: 139 KIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITF 282
K+FVG + + + ++++ F FG I E + DK KG F+T+
Sbjct: 30 KLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTY 77
Score = 37.5 bits (83), Expect = 0.005
Identities = 22/81 (27%), Positives = 39/81 (48%)
Frame = +1
Query: 43 KAPDSIDKVMAAGEHTINSKKVDPKKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIE 222
K +++ M +S+ PK K K+F+G LS + S+DE++ F+ FG + E
Sbjct: 94 KTLPGMNRAMQVKPADTDSRPASPKD-KMDDKKLFIGMLSKQQSEDEVRALFATFGELDE 152
Query: 223 VEMPFDKTKNQRKGFCFITFE 285
V + KG F+ ++
Sbjct: 153 VTV-LRGADGASKGCAFVKYK 172
>Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical
protein F26A3.2 protein.
Length = 154
Score = 37.1 bits (82), Expect = 0.007
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = +1
Query: 142 IFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQ 294
++VG LS +D++ F G++ V M D+ K GFCF+ + + +
Sbjct: 39 LYVGNLSYYTKEDQVYELFGRAGDVRRVIMGLDRFKKTPCGFCFVEYYTRE 89
>U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor
U2AF65 protein.
Length = 496
Score = 35.9 bits (79), Expect = 0.017
Identities = 19/76 (25%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Frame = +1
Query: 139 KIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLK- 315
KIF+GGL + +++D++K +FG + + D N KG+ F + + ++ +
Sbjct: 292 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNS-KGYAFAEYLDPTLTDQAIAG 350
Query: 316 TPKQTIGGKEVDVKRA 363
+G K++ V+ A
Sbjct: 351 LNGMQLGDKQLVVQLA 366
>AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing
factor protein 1,isoform a protein.
Length = 496
Score = 35.9 bits (79), Expect = 0.017
Identities = 19/76 (25%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Frame = +1
Query: 139 KIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLK- 315
KIF+GGL + +++D++K +FG + + D N KG+ F + + ++ +
Sbjct: 292 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNS-KGYAFAEYLDPTLTDQAIAG 350
Query: 316 TPKQTIGGKEVDVKRA 363
+G K++ V+ A
Sbjct: 351 LNGMQLGDKQLVVQLA 366
>AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing
factor protein 1,isoform d protein.
Length = 471
Score = 35.9 bits (79), Expect = 0.017
Identities = 19/76 (25%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Frame = +1
Query: 139 KIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLK- 315
KIF+GGL + +++D++K +FG + + D N KG+ F + + ++ +
Sbjct: 267 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNS-KGYAFAEYLDPTLTDQAIAG 325
Query: 316 TPKQTIGGKEVDVKRA 363
+G K++ V+ A
Sbjct: 326 LNGMQLGDKQLVVQLA 341
>AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing
factor protein 1,isoform c protein.
Length = 474
Score = 35.9 bits (79), Expect = 0.017
Identities = 19/76 (25%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Frame = +1
Query: 139 KIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLK- 315
KIF+GGL + +++D++K +FG + + D N KG+ F + + ++ +
Sbjct: 270 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNS-KGYAFAEYLDPTLTDQAIAG 328
Query: 316 TPKQTIGGKEVDVKRA 363
+G K++ V+ A
Sbjct: 329 LNGMQLGDKQLVVQLA 344
>U23450-1|AAK31467.2| 422|Caenorhabditis elegans Cpeb polya binding
family protein 2 protein.
Length = 422
Score = 35.5 bits (78), Expect = 0.022
Identities = 15/32 (46%), Positives = 23/32 (71%)
Frame = +1
Query: 139 KIFVGGLSSEISDDEIKNFFSNFGNIIEVEMP 234
K+FVGGL S + + +I NFFS +G ++V+ P
Sbjct: 89 KVFVGGLPSCVKESDILNFFSRYGR-LQVDWP 119
>Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical
protein W02B12.3c protein.
Length = 150
Score = 35.1 bits (77), Expect = 0.029
Identities = 19/79 (24%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Frame = +1
Query: 139 KIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLKT 318
+I++G L+S +S+ +I++FF +G I +V + + GF F+ F+ ++ + +
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLL--------KNGFGFVEFDDKRDAEDAVHD 55
Query: 319 PK-QTIGGKEVDVKRATPK 372
+ +GG+ V + + P+
Sbjct: 56 LNGKELGGERVILDYSKPR 74
>Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical
protein W02B12.3b protein.
Length = 148
Score = 35.1 bits (77), Expect = 0.029
Identities = 19/79 (24%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Frame = +1
Query: 139 KIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLKT 318
+I++G L+S +S+ +I++FF +G I +V + + GF F+ F+ ++ + +
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLL--------KNGFGFVEFDDKRDAEDAVHD 55
Query: 319 PK-QTIGGKEVDVKRATPK 372
+ +GG+ V + + P+
Sbjct: 56 LNGKELGGERVILDYSKPR 74
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 35.1 bits (77), Expect = 0.029
Identities = 19/79 (24%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Frame = +1
Query: 139 KIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLKT 318
+I++G L+S +S+ +I++FF +G I +V + + GF F+ F+ ++ + +
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLL--------KNGFGFVEFDDKRDAEDAVHD 55
Query: 319 PK-QTIGGKEVDVKRATPK 372
+ +GG+ V + + P+
Sbjct: 56 LNGKELGGERVILDYSKPR 74
>U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical
protein F25B5.7d protein.
Length = 374
Score = 35.1 bits (77), Expect = 0.029
Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
Frame = +1
Query: 112 PKKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESE 291
PKK ++FVG L +E+ + E+K FS G+I E + KGF F+ ++
Sbjct: 108 PKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAECYL-------SGKGFAFLRLDTR 160
Query: 292 QVVNELLKT-PKQTIGGKEVDVKRA 363
+ + I G++V V+ A
Sbjct: 161 AHAESAKEAIDGRIIHGRQVRVRFA 185
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 35.1 bits (77), Expect = 0.029
Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
Frame = +1
Query: 112 PKKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESE 291
PKK ++FVG L +E+ + E+K FS G+I E + KGF F+ ++
Sbjct: 108 PKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAECYL-------SGKGFAFLRLDTR 160
Query: 292 QVVNELLKT-PKQTIGGKEVDVKRA 363
+ + I G++V V+ A
Sbjct: 161 AHAESAKEAIDGRIIHGRQVRVRFA 185
>U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical
protein F25B5.7b protein.
Length = 165
Score = 34.3 bits (75), Expect = 0.050
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +1
Query: 112 PKKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIE 222
PKK ++FVG L +E+ + E+K FS G+I E
Sbjct: 108 PKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAE 144
>AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform c protein.
Length = 346
Score = 34.3 bits (75), Expect = 0.050
Identities = 14/58 (24%), Positives = 34/58 (58%)
Frame = +1
Query: 115 KKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFES 288
K AK ++ +++V + ++S+ ++K+ F FG I++ ++ T +GF ++ F +
Sbjct: 201 KDAK-KYFRVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNN 257
>AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical
protein ZK616.1 protein.
Length = 491
Score = 34.3 bits (75), Expect = 0.050
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +1
Query: 139 KIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPF-DKTKNQRKGFCFITFESEQVVNELL 312
+++VGG S+ +S ++I+N + EV + + + +GF F+ S N LL
Sbjct: 10 RLYVGGFSTNLSSEQIRNLITQLAAPFEVSIDIVENGSRKHRGFAFVQCRSLAEANVLL 68
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 33.5 bits (73), Expect = 0.088
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +1
Query: 148 VGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITF 282
V LSS ++ ++++ F FG I + ++ +D+ +GF FI F
Sbjct: 80 VFNLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYF 124
>Z68879-10|CAA93082.2| 473|Caenorhabditis elegans Hypothetical
protein K08F4.2 protein.
Length = 473
Score = 33.5 bits (73), Expect = 0.088
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 11/76 (14%)
Frame = +1
Query: 121 AKARHGKIFVGGLSSEI-------SDDEIKNFFSNFGNIIEVEMP---FDKTKNQRK-GF 267
A KI++GG++ EI ++ EIK F +G I EV MP D + K F
Sbjct: 321 ANLNERKIYLGGITREIVPSNTAQAESEIKQVFYKYGEIEEVRMPRKVLDSPNDTSKHAF 380
Query: 268 CFITFESEQVVNELLK 315
FIT ++ V + +
Sbjct: 381 AFITMRNKAGVKAIFE 396
>AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3c protein.
Length = 435
Score = 32.7 bits (71), Expect = 0.15
Identities = 16/60 (26%), Positives = 30/60 (50%)
Frame = +1
Query: 181 EIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLKTPKQTIGGKEVDVKR 360
+++ FFS G + +V + D + KG C++ F E+ V L Q + G + ++R
Sbjct: 40 DLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEFWDEESVPLGLALNGQRLMGAPLQIQR 99
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 32.7 bits (71), Expect = 0.15
Identities = 16/60 (26%), Positives = 30/60 (50%)
Frame = +1
Query: 181 EIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLKTPKQTIGGKEVDVKR 360
+++ FFS G + +V + D + KG C++ F E+ V L Q + G + ++R
Sbjct: 185 DLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEFWDEESVPLGLALNGQRLMGAPLQIQR 244
>Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 32.3 bits (70), Expect = 0.20
Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 1/94 (1%)
Frame = +1
Query: 79 GEHTINSKKVDPKKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIE-VEMPFDKTKNQ 255
G+HT + + K +FVG +S + SD+ I+ + GN+ + K Q
Sbjct: 31 GQHTPAQQS---SQQKPDSSPVFVGNISDKCSDEFIRKILNECGNVASWKRIKGSNGKLQ 87
Query: 256 RKGFCFITFESEQVVNELLKTPKQTIGGKEVDVK 357
GFC T + E + L + +G K++ VK
Sbjct: 88 GFGFCHFT-DLEGTLRALRILHEFHLGDKKLTVK 120
>Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 32.3 bits (70), Expect = 0.20
Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 1/94 (1%)
Frame = +1
Query: 79 GEHTINSKKVDPKKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIE-VEMPFDKTKNQ 255
G+HT + + K +FVG +S + SD+ I+ + GN+ + K Q
Sbjct: 31 GQHTPAQQS---SQQKPDSSPVFVGNISDKCSDEFIRKILNECGNVASWKRIKGSNGKLQ 87
Query: 256 RKGFCFITFESEQVVNELLKTPKQTIGGKEVDVK 357
GFC T + E + L + +G K++ VK
Sbjct: 88 GFGFCHFT-DLEGTLRALRILHEFHLGDKKLTVK 120
>Z19154-9|CAA79552.2| 559|Caenorhabditis elegans Hypothetical
protein C40H1.1 protein.
Length = 559
Score = 32.3 bits (70), Expect = 0.20
Identities = 23/97 (23%), Positives = 43/97 (44%), Gaps = 15/97 (15%)
Frame = +1
Query: 67 VMAAGEHTINSKKVDPKKAKARHG-KIFVGGLSSEISDDEIKNFFSNFGNII-------- 219
+M + + + K P A+ + K+F+GGL ++S++++ F FG ++
Sbjct: 221 LMGVSKSCLEASKKRPISAEPLYSRKVFIGGLPIDVSEEQVWATFGAFGKVLIDWPRRPE 280
Query: 220 ----EVEMPFDKTKNQR--KGFCFITFESEQVVNELL 312
E K R G+ F+ F E+ V EL+
Sbjct: 281 HNAERAEQELKKGSGSRAVTGYVFLVFTHERSVQELV 317
>Z99281-6|CAB54458.2| 625|Caenorhabditis elegans Hypothetical
protein Y57G11C.9b protein.
Length = 625
Score = 31.9 bits (69), Expect = 0.27
Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Frame = +1
Query: 85 HTINSKKVDPKKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDK-TKNQRK 261
H N +++ + IF+ GL +IS +EIK + + ++ F K +++ K
Sbjct: 33 HYNNLPRINETQVPQSKHTIFIRGLHGDISTEEIKEYIGE--KVGKISFDFVKVAQDKSK 90
Query: 262 GFCFITFESEQVVNELLKT 318
F + FE+ E ++T
Sbjct: 91 IFVAVRFENRDEAKEFMET 109
>Z99281-5|CAB54457.1| 553|Caenorhabditis elegans Hypothetical
protein Y57G11C.9a protein.
Length = 553
Score = 31.9 bits (69), Expect = 0.27
Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Frame = +1
Query: 85 HTINSKKVDPKKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDK-TKNQRK 261
H N +++ + IF+ GL +IS +EIK + + ++ F K +++ K
Sbjct: 33 HYNNLPRINETQVPQSKHTIFIRGLHGDISTEEIKEYIGE--KVGKISFDFVKVAQDKSK 90
Query: 262 GFCFITFESEQVVNELLKT 318
F + FE+ E ++T
Sbjct: 91 IFVAVRFENRDEAKEFMET 109
>U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform c protein.
Length = 118
Score = 31.9 bits (69), Expect = 0.27
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = +1
Query: 139 KIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFE 285
K++VGGL S+ + E++ F FG I +V + + GF F+ ++
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWV-----ARRPPGFAFVEYD 47
>U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform b protein.
Length = 153
Score = 31.9 bits (69), Expect = 0.27
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = +1
Query: 139 KIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFE 285
K++VGGL S+ + E++ F FG I +V + + GF F+ ++
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWV-----ARRPPGFAFVEYD 47
>U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform a protein.
Length = 179
Score = 31.9 bits (69), Expect = 0.27
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = +1
Query: 139 KIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFE 285
K++VGGL S+ + E++ F FG I +V + + GF F+ ++
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWV-----ARRPPGFAFVEYD 47
>U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 5 protein.
Length = 289
Score = 31.9 bits (69), Expect = 0.27
Identities = 17/35 (48%), Positives = 17/35 (48%)
Frame = -1
Query: 496 RNRRSPGCPTADPRSRRGLRARPEPPCRRGPRARS 392
R R SP P D R R G R R RR P ARS
Sbjct: 94 RRRPSPSPPRRDRRDRSGSRQRRRASPRRSPAARS 128
>Z81494-10|CAN86581.1| 1507|Caenorhabditis elegans Hypothetical
protein F02E9.4b protein.
Length = 1507
Score = 31.5 bits (68), Expect = 0.36
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = -1
Query: 484 SPGCPTADPRSRRGLRARPEPPCRRGPRARSYPRAHQAWAWL 359
S GCP +PR ++G R + P R+ P PR +A A+L
Sbjct: 254 SAGCPQREPRQQQGGRRQNRPGRRKKPEGP--PRVDEALAYL 293
>Z81494-9|CAB04052.2| 1505|Caenorhabditis elegans Hypothetical
protein F02E9.4a protein.
Length = 1505
Score = 31.5 bits (68), Expect = 0.36
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = -1
Query: 484 SPGCPTADPRSRRGLRARPEPPCRRGPRARSYPRAHQAWAWL 359
S GCP +PR ++G R + P R+ P PR +A A+L
Sbjct: 254 SAGCPQREPRQQQGGRRQNRPGRRKKPEGP--PRVDEALAYL 293
>Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical
protein T12D8.2 protein.
Length = 207
Score = 31.1 bits (67), Expect = 0.47
Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = +1
Query: 166 EISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLK-TPKQTIGGK 342
+ +D+E+K F ++ + D+ KGF ++TFE+EQ +N + G +
Sbjct: 30 KFTDEELKKF--------DIHLVHDRDSGSFKGFAYVTFENEQQMNTAISGLNGADFGNR 81
Query: 343 EVDVKRA 363
+ V RA
Sbjct: 82 VLKVNRA 88
>Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical
protein W02B12.2 protein.
Length = 281
Score = 31.1 bits (67), Expect = 0.47
Identities = 16/70 (22%), Positives = 38/70 (54%)
Frame = +1
Query: 139 KIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLKT 318
++++G L + SD ++++FF +G + +V M + GF F+ F+ ++ ++ +
Sbjct: 3 RVYIGRLPNRASDRDVEHFFRGYGKLSDVIM--------KNGFGFVDFQDQRDADDAV-- 52
Query: 319 PKQTIGGKEV 348
+ GKE+
Sbjct: 53 --HDLNGKEL 60
>Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical
protein T04A8.6 protein.
Length = 307
Score = 31.1 bits (67), Expect = 0.47
Identities = 9/41 (21%), Positives = 24/41 (58%)
Frame = +1
Query: 175 DDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQV 297
+ E+ +F FGN++ + + ++ KG+ ++ F+++ V
Sbjct: 45 EKELLGYFRQFGNVLRIRVARNRRTGNHKGWAYVGFDNKAV 85
>Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 30.3 bits (65), Expect = 0.82
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = +1
Query: 142 IFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFES 288
+FV L+ +D++++ FS FG I E+ D+ + FI F++
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDN 291
>Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 30.3 bits (65), Expect = 0.82
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = +1
Query: 142 IFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFES 288
+FV L+ +D++++ FS FG I E+ D+ + FI F++
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDN 291
>Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical
protein F39H2.2b protein.
Length = 358
Score = 30.3 bits (65), Expect = 0.82
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = +1
Query: 142 IFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFES 288
+FV L+ +D++++ FS FG I E+ D+ + FI F++
Sbjct: 174 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDN 222
>Z75714-1|CAB00058.1| 194|Caenorhabditis elegans Hypothetical
protein ZC434.2 protein.
Length = 194
Score = 29.9 bits (64), Expect = 1.1
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -1
Query: 460 PRSRRGLRARPEPPCRRGPRARSYPRAHQAW 368
P+ +RG +ARP+ R PR+R+ H AW
Sbjct: 101 PKPQRGSKARPQKQKR--PRSRTLTAVHDAW 129
>U28944-8|AAK68193.1| 103|Caenorhabditis elegans Hypothetical
protein C18A3.5c protein.
Length = 103
Score = 29.5 bits (63), Expect = 1.4
Identities = 10/34 (29%), Positives = 22/34 (64%)
Frame = +1
Query: 142 IFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDK 243
++VG L S +++D I F+ G++ + ++ FD+
Sbjct: 48 LYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDE 81
>AC006627-3|AAK85461.1| 504|Caenorhabditis elegans Hypothetical
protein E01A2.4 protein.
Length = 504
Score = 29.5 bits (63), Expect = 1.4
Identities = 17/41 (41%), Positives = 20/41 (48%)
Frame = -1
Query: 496 RNRRSPGCPTADPRSRRGLRARPEPPCRRGPRARSYPRAHQ 374
R RRSP P SR +R PP R+ R+RS P Q
Sbjct: 110 RTRRSPSPPRRRRISRSPVRRSRSPPRRQVSRSRSPPPRRQ 150
Score = 27.5 bits (58), Expect = 5.8
Identities = 18/41 (43%), Positives = 22/41 (53%)
Frame = -1
Query: 502 RTRNRRSPGCPTADPRSRRGLRARPEPPCRRGPRARSYPRA 380
R R RSP + P R+ R+R PP RR R+RS P A
Sbjct: 120 RRRISRSPVRRSRSPPRRQVSRSRSPPP-RRQQRSRSPPPA 159
>Z81069-1|CAB02990.1| 359|Caenorhabditis elegans Hypothetical
protein F25H9.1 protein.
Length = 359
Score = 29.1 bits (62), Expect = 1.9
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +1
Query: 190 NFFSNFGNIIEVEMPFDKTKNQRKGFCFIT 279
++F+N+ N+I+ E +D+ R FCFIT
Sbjct: 238 DYFTNYENLIKNESYYDEGIQCRGHFCFIT 267
>U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical
protein C27H5.3 protein.
Length = 448
Score = 28.7 bits (61), Expect = 2.5
Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 6/53 (11%)
Frame = +1
Query: 142 IFVGGLSSEISDDEIKNFFSNFGNIIE------VEMPFDKTKNQRKGFCFITF 282
+FV G+S+ ++ I + FS G+I + +++ D+ + KG C ITF
Sbjct: 203 VFVQGISTTANEAYIADVFSTCGDIAKNDRGPRIKIYTDRNTGEPKGECMITF 255
>AF003145-3|AAB57717.1| 751|Caenorhabditis elegans Cpeb polya
binding family protein 3 protein.
Length = 751
Score = 28.7 bits (61), Expect = 2.5
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +1
Query: 139 KIFVGGLSSEISDDEIKNFFSNFGNIIEVEMP 234
KIFVGG+ +I++ +K+ F FG+ VE P
Sbjct: 296 KIFVGGVPWDITEAALKDSFGEFGS-CAVEWP 326
>AF003140-8|AAB54169.1| 396|Caenorhabditis elegans Hypothetical
protein C44E4.4 protein.
Length = 396
Score = 28.3 bits (60), Expect = 3.3
Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +1
Query: 124 KARHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQR-KGFCFITFESEQ 294
K +H +++ G S++ D+I + + FG V M K ++ KG FIT+++ +
Sbjct: 106 KIKHRTVYMKGFSTDTQLDDIIQWANQFGETENVLMRRLKPGDRTFKGSVFITYKTRE 163
>Z19155-4|CAA79560.3| 844|Caenorhabditis elegans Hypothetical
protein F54G8.5 protein.
Length = 844
Score = 27.5 bits (58), Expect = 5.8
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = -3
Query: 293 CSDSNVMKQNPFLWFFVLSKGISTSIIFPKLL 198
CS N++K PF+ FF + +I LL
Sbjct: 283 CSSLNIVKSQPFIGFFAMFNATMATIASTSLL 314
>AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical
protein F29C4.7b protein.
Length = 423
Score = 27.5 bits (58), Expect = 5.8
Identities = 18/74 (24%), Positives = 33/74 (44%), Gaps = 6/74 (8%)
Frame = +1
Query: 25 FAFIVFKAPDSIDKVMAAGEHTINSKKVDPKKAKARHGK------IFVGGLSSEISDDEI 186
+AF++F+ D + A E + + K +GK +FVGGL S + +
Sbjct: 210 YAFVMFQTVDQA--IQAKAEEQDRPIRAGGSRMKIGYGKSQVSRRLFVGGLGSWCDKEIL 267
Query: 187 KNFFSNFGNIIEVE 228
+ F FG + ++
Sbjct: 268 QKAFGEFGFVENID 281
>AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical
protein F29C4.7a protein.
Length = 520
Score = 27.5 bits (58), Expect = 5.8
Identities = 18/74 (24%), Positives = 33/74 (44%), Gaps = 6/74 (8%)
Frame = +1
Query: 25 FAFIVFKAPDSIDKVMAAGEHTINSKKVDPKKAKARHGK------IFVGGLSSEISDDEI 186
+AF++F+ D + A E + + K +GK +FVGGL S + +
Sbjct: 210 YAFVMFQTVDQA--IQAKAEEQDRPIRAGGSRMKIGYGKSQVSRRLFVGGLGSWCDKEIL 267
Query: 187 KNFFSNFGNIIEVE 228
+ F FG + ++
Sbjct: 268 QKAFGEFGFVENID 281
>AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical
protein F29C4.7c protein.
Length = 497
Score = 27.5 bits (58), Expect = 5.8
Identities = 18/74 (24%), Positives = 33/74 (44%), Gaps = 6/74 (8%)
Frame = +1
Query: 25 FAFIVFKAPDSIDKVMAAGEHTINSKKVDPKKAKARHGK------IFVGGLSSEISDDEI 186
+AF++F+ D + A E + + K +GK +FVGGL S + +
Sbjct: 187 YAFVMFQTVDQA--IQAKAEEQDRPIRAGGSRMKIGYGKSQVSRRLFVGGLGSWCDKEIL 244
Query: 187 KNFFSNFGNIIEVE 228
+ F FG + ++
Sbjct: 245 QKAFGEFGFVENID 258
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 27.1 bits (57), Expect = 7.6
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +1
Query: 10 GRSRGFAFIVFKAPDSIDKVMAAGEHT-INSKKVDPKKAK 126
G+ RGFAF+ F S +A T NSKK+ ++ +
Sbjct: 40 GKFRGFAFVGFLDEGSASNALAKSNQTFFNSKKLTVEECR 79
>Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical
protein R74.5b protein.
Length = 286
Score = 27.1 bits (57), Expect = 7.6
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Frame = +1
Query: 16 SRGFAFIVFKAPDSIDKVMAA-GEHTINSKKVDPKKAKAR-HGK 141
S+GF F+ + PD D+ A TI ++V+ A R H K
Sbjct: 20 SKGFGFVTMQNPDDADRARAEFNGTTIEGRRVEVNLATQRVHNK 63
>Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical
protein R74.5a protein.
Length = 404
Score = 27.1 bits (57), Expect = 7.6
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Frame = +1
Query: 16 SRGFAFIVFKAPDSIDKVMAA-GEHTINSKKVDPKKAKAR-HGK 141
S+GF F+ + PD D+ A TI ++V+ A R H K
Sbjct: 138 SKGFGFVTMQNPDDADRARAEFNGTTIEGRRVEVNLATQRVHNK 181
>DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding
protein ASD-1 protein.
Length = 404
Score = 27.1 bits (57), Expect = 7.6
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Frame = +1
Query: 16 SRGFAFIVFKAPDSIDKVMAA-GEHTINSKKVDPKKAKAR-HGK 141
S+GF F+ + PD D+ A TI ++V+ A R H K
Sbjct: 138 SKGFGFVTMQNPDDADRARAEFNGTTIEGRRVEVNLATQRVHNK 181
>AF026210-5|AAB71287.1| 632|Caenorhabditis elegans Hypothetical
protein F48A11.5a protein.
Length = 632
Score = 27.1 bits (57), Expect = 7.6
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = -1
Query: 484 SPGCPTADPRSRRGLRARPEPPCRRGP 404
S G +A SRRG RA P PP + P
Sbjct: 159 SSGSSSASFSSRRGTRANPVPPPNQEP 185
>AF026210-4|AAT81192.1| 627|Caenorhabditis elegans Hypothetical
protein F48A11.5b protein.
Length = 627
Score = 27.1 bits (57), Expect = 7.6
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = -1
Query: 484 SPGCPTADPRSRRGLRARPEPPCRRGP 404
S G +A SRRG RA P PP + P
Sbjct: 154 SSGSSSASFSSRRGTRANPVPPPNQEP 180
>AF022982-4|AAB69938.1| 296|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 22 protein.
Length = 296
Score = 27.1 bits (57), Expect = 7.6
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +1
Query: 166 EISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFES 288
+ S+D+I+ FS FG I + +K K++RK + FES
Sbjct: 194 DYSEDDIRKLFSTFGIISHISSAIEK-KDRRKR--ILEFES 231
>AC024791-14|AAF60658.1| 767|Caenorhabditis elegans P300/cbp
associated factor homologprotein 1 protein.
Length = 767
Score = 27.1 bits (57), Expect = 7.6
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = +1
Query: 16 SRGFAFIVFKAPDSIDKVMAAGEHTINSKKVDPKKAKARH 135
SRGF IVF A ++++V G H +N K K K H
Sbjct: 487 SRGFVEIVFCAITAMEQVKGYGTHLMNHCKDYMIKNKIYH 526
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.317 0.136 0.386
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,022,054
Number of Sequences: 27780
Number of extensions: 166501
Number of successful extensions: 810
Number of sequences better than 10.0: 116
Number of HSP's better than 10.0 without gapping: 706
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 788
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 956602620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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