Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_J02
(601 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U54559-1|AAD03465.1| 352|Homo sapiens translation initiation fa... 217 3e-56
CR456906-1|CAG33187.1| 352|Homo sapiens EIF3S3 protein. 217 3e-56
BT019594-1|AAV38401.1| 352|Homo sapiens eukaryotic translation ... 217 3e-56
BC090880-1|AAH90880.1| 349|Homo sapiens EIF3H protein protein. 217 3e-56
BC000386-1|AAH00386.1| 352|Homo sapiens eukaryotic translation ... 217 3e-56
AK222520-1|BAD96240.1| 352|Homo sapiens eukaryotic translation ... 217 3e-56
AF092576-1|AAC84044.1| 352|Homo sapiens translation initiation ... 215 1e-55
AK222620-1|BAD96340.1| 352|Homo sapiens eukaryotic translation ... 215 1e-55
AF354444-1|AAK18634.1| 348|Homo sapiens IFP38 protein. 42 0.001
U94855-1|AAD03467.1| 357|Homo sapiens translation initiation fa... 39 0.015
CR456959-1|CAG33240.1| 357|Homo sapiens EIF3S5 protein. 39 0.015
BT006894-1|AAP35540.1| 357|Homo sapiens eukaryotic translation ... 39 0.015
BC000490-1|AAH00490.1| 357|Homo sapiens eukaryotic translation ... 39 0.015
AK095574-1|BAC04577.1| 350|Homo sapiens protein ( Homo sapiens ... 39 0.015
D50063-1|BAA08780.1| 324|Homo sapiens proteasome subunit p40 / ... 30 5.4
BC012606-1|AAH12606.1| 324|Homo sapiens proteasome (prosome, ma... 30 5.4
BC000338-1|AAH00338.1| 326|Homo sapiens PSMD7 protein protein. 30 5.4
>U54559-1|AAD03465.1| 352|Homo sapiens translation initiation
factor eIF3 p40 subunit protein.
Length = 352
Score = 217 bits (529), Expect = 3e-56
Identities = 102/197 (51%), Positives = 147/197 (74%), Gaps = 3/197 (1%)
Frame = +1
Query: 7 GLVVENRLEITNCFPFPKH---DDTMDEEEYQLDMMRRLRRVNVDHFHVGWYQSADVGNF 177
GLVVE+RLEITNCFPFP+H D DE +YQ++MMR LR VN+DH HVGWYQS G+F
Sbjct: 69 GLVVEDRLEITNCFPFPQHTEDDADFDEVQYQMEMMRSLRHVNIDHLHVGWYQSTYYGSF 128
Query: 178 LSQSLLESQYHYQTSIEESVVVIYDTKKSARGFLTLKAYRLTPQAIAMYKEGDYTPDALR 357
++++LL+SQ+ YQ +IEESVV+IYD K+A+G L+LKAYRLTP+ + + KE D++P+AL+
Sbjct: 129 VTRALLDSQFSYQHAIEESVVLIYDPIKTAQGSLSLKAYRLTPKLMEVCKEKDFSPEALK 188
Query: 358 NLKIGYESLFIEVPIVIRNSPLTNIMISELTEMIPEEEGSKFLDLGTASVLDGQLRSLME 537
I +E +F EVPIVI+NS L N+++ EL + + + L L +++ L L+ LM+
Sbjct: 189 KANITFEYMFEEVPIVIKNSHLINVLMWELEKKSAVADKHELLSLASSNHLGKNLQLLMD 248
Query: 538 RVDELNQEAIKFNRYQQ 588
RVDE++Q+ +K+N Y +
Sbjct: 249 RVDEMSQDIVKYNTYMR 265
>CR456906-1|CAG33187.1| 352|Homo sapiens EIF3S3 protein.
Length = 352
Score = 217 bits (529), Expect = 3e-56
Identities = 102/197 (51%), Positives = 147/197 (74%), Gaps = 3/197 (1%)
Frame = +1
Query: 7 GLVVENRLEITNCFPFPKH---DDTMDEEEYQLDMMRRLRRVNVDHFHVGWYQSADVGNF 177
GLVVE+RLEITNCFPFP+H D DE +YQ++MMR LR VN+DH HVGWYQS G+F
Sbjct: 69 GLVVEDRLEITNCFPFPQHTEDDADFDEVQYQMEMMRSLRHVNIDHLHVGWYQSTYYGSF 128
Query: 178 LSQSLLESQYHYQTSIEESVVVIYDTKKSARGFLTLKAYRLTPQAIAMYKEGDYTPDALR 357
++++LL+SQ+ YQ +IEESVV+IYD K+A+G L+LKAYRLTP+ + + KE D++P+AL+
Sbjct: 129 VTRALLDSQFSYQHAIEESVVLIYDPIKTAQGSLSLKAYRLTPKLMEVCKEKDFSPEALK 188
Query: 358 NLKIGYESLFIEVPIVIRNSPLTNIMISELTEMIPEEEGSKFLDLGTASVLDGQLRSLME 537
I +E +F EVPIVI+NS L N+++ EL + + + L L +++ L L+ LM+
Sbjct: 189 KANITFEYMFEEVPIVIKNSHLINVLMWELEKKSAVADKHELLSLASSNHLGKNLQLLMD 248
Query: 538 RVDELNQEAIKFNRYQQ 588
RVDE++Q+ +K+N Y +
Sbjct: 249 RVDEMSQDIVKYNTYMR 265
>BT019594-1|AAV38401.1| 352|Homo sapiens eukaryotic translation
initiation factor 3, subunit 3 gamma, 40kDa protein.
Length = 352
Score = 217 bits (529), Expect = 3e-56
Identities = 102/197 (51%), Positives = 147/197 (74%), Gaps = 3/197 (1%)
Frame = +1
Query: 7 GLVVENRLEITNCFPFPKH---DDTMDEEEYQLDMMRRLRRVNVDHFHVGWYQSADVGNF 177
GLVVE+RLEITNCFPFP+H D DE +YQ++MMR LR VN+DH HVGWYQS G+F
Sbjct: 69 GLVVEDRLEITNCFPFPQHTEDDADFDEVQYQMEMMRSLRHVNIDHLHVGWYQSTYYGSF 128
Query: 178 LSQSLLESQYHYQTSIEESVVVIYDTKKSARGFLTLKAYRLTPQAIAMYKEGDYTPDALR 357
++++LL+SQ+ YQ +IEESVV+IYD K+A+G L+LKAYRLTP+ + + KE D++P+AL+
Sbjct: 129 VTRALLDSQFSYQHAIEESVVLIYDPIKTAQGSLSLKAYRLTPKLMEVCKEKDFSPEALK 188
Query: 358 NLKIGYESLFIEVPIVIRNSPLTNIMISELTEMIPEEEGSKFLDLGTASVLDGQLRSLME 537
I +E +F EVPIVI+NS L N+++ EL + + + L L +++ L L+ LM+
Sbjct: 189 KANITFEYMFEEVPIVIKNSHLINVLMWELEKKSAVADKHELLSLASSNHLGKNLQLLMD 248
Query: 538 RVDELNQEAIKFNRYQQ 588
RVDE++Q+ +K+N Y +
Sbjct: 249 RVDEMSQDIVKYNTYMR 265
>BC090880-1|AAH90880.1| 349|Homo sapiens EIF3H protein protein.
Length = 349
Score = 217 bits (529), Expect = 3e-56
Identities = 102/197 (51%), Positives = 147/197 (74%), Gaps = 3/197 (1%)
Frame = +1
Query: 7 GLVVENRLEITNCFPFPKH---DDTMDEEEYQLDMMRRLRRVNVDHFHVGWYQSADVGNF 177
GLVVE+RLEITNCFPFP+H D DE +YQ++MMR LR VN+DH HVGWYQS G+F
Sbjct: 66 GLVVEDRLEITNCFPFPQHTEDDADFDEVQYQMEMMRSLRHVNIDHLHVGWYQSTYYGSF 125
Query: 178 LSQSLLESQYHYQTSIEESVVVIYDTKKSARGFLTLKAYRLTPQAIAMYKEGDYTPDALR 357
++++LL+SQ+ YQ +IEESVV+IYD K+A+G L+LKAYRLTP+ + + KE D++P+AL+
Sbjct: 126 VTRALLDSQFSYQHAIEESVVLIYDPIKTAQGSLSLKAYRLTPKLMEVCKEKDFSPEALK 185
Query: 358 NLKIGYESLFIEVPIVIRNSPLTNIMISELTEMIPEEEGSKFLDLGTASVLDGQLRSLME 537
I +E +F EVPIVI+NS L N+++ EL + + + L L +++ L L+ LM+
Sbjct: 186 KANITFEYMFEEVPIVIKNSHLINVLMWELEKKSAVADKHELLSLASSNHLGKNLQLLMD 245
Query: 538 RVDELNQEAIKFNRYQQ 588
RVDE++Q+ +K+N Y +
Sbjct: 246 RVDEMSQDIVKYNTYMR 262
>BC000386-1|AAH00386.1| 352|Homo sapiens eukaryotic translation
initiation factor 3, subunit 3 gamma, 40kDa protein.
Length = 352
Score = 217 bits (529), Expect = 3e-56
Identities = 102/197 (51%), Positives = 147/197 (74%), Gaps = 3/197 (1%)
Frame = +1
Query: 7 GLVVENRLEITNCFPFPKH---DDTMDEEEYQLDMMRRLRRVNVDHFHVGWYQSADVGNF 177
GLVVE+RLEITNCFPFP+H D DE +YQ++MMR LR VN+DH HVGWYQS G+F
Sbjct: 69 GLVVEDRLEITNCFPFPQHTEDDADFDEVQYQMEMMRSLRHVNIDHLHVGWYQSTYYGSF 128
Query: 178 LSQSLLESQYHYQTSIEESVVVIYDTKKSARGFLTLKAYRLTPQAIAMYKEGDYTPDALR 357
++++LL+SQ+ YQ +IEESVV+IYD K+A+G L+LKAYRLTP+ + + KE D++P+AL+
Sbjct: 129 VTRALLDSQFSYQHAIEESVVLIYDPIKTAQGSLSLKAYRLTPKLMEVCKEKDFSPEALK 188
Query: 358 NLKIGYESLFIEVPIVIRNSPLTNIMISELTEMIPEEEGSKFLDLGTASVLDGQLRSLME 537
I +E +F EVPIVI+NS L N+++ EL + + + L L +++ L L+ LM+
Sbjct: 189 KANITFEYMFEEVPIVIKNSHLINVLMWELEKKSAVADKHELLSLASSNHLGKNLQLLMD 248
Query: 538 RVDELNQEAIKFNRYQQ 588
RVDE++Q+ +K+N Y +
Sbjct: 249 RVDEMSQDIVKYNTYMR 265
>AK222520-1|BAD96240.1| 352|Homo sapiens eukaryotic translation
initiation factor 3, subunit 3 gamma, 40kDa variant
protein.
Length = 352
Score = 217 bits (529), Expect = 3e-56
Identities = 102/197 (51%), Positives = 147/197 (74%), Gaps = 3/197 (1%)
Frame = +1
Query: 7 GLVVENRLEITNCFPFPKH---DDTMDEEEYQLDMMRRLRRVNVDHFHVGWYQSADVGNF 177
GLVVE+RLEITNCFPFP+H D DE +YQ++MMR LR VN+DH HVGWYQS G+F
Sbjct: 69 GLVVEDRLEITNCFPFPQHTEDDADFDEVQYQMEMMRSLRHVNIDHLHVGWYQSTYYGSF 128
Query: 178 LSQSLLESQYHYQTSIEESVVVIYDTKKSARGFLTLKAYRLTPQAIAMYKEGDYTPDALR 357
++++LL+SQ+ YQ +IEESVV+IYD K+A+G L+LKAYRLTP+ + + KE D++P+AL+
Sbjct: 129 VTRALLDSQFSYQHAIEESVVLIYDPIKTAQGSLSLKAYRLTPKLMEVCKEKDFSPEALK 188
Query: 358 NLKIGYESLFIEVPIVIRNSPLTNIMISELTEMIPEEEGSKFLDLGTASVLDGQLRSLME 537
I +E +F EVPIVI+NS L N+++ EL + + + L L +++ L L+ LM+
Sbjct: 189 KANITFEYMFEEVPIVIKNSHLINVLMWELEKKSAVADKHELLSLASSNHLGKNLQLLMD 248
Query: 538 RVDELNQEAIKFNRYQQ 588
RVDE++Q+ +K+N Y +
Sbjct: 249 RVDEMSQDIVKYNTYMR 265
>AF092576-1|AAC84044.1| 352|Homo sapiens translation initiation
factor eIF3 p40 subunit protein.
Length = 352
Score = 215 bits (525), Expect = 1e-55
Identities = 101/197 (51%), Positives = 147/197 (74%), Gaps = 3/197 (1%)
Frame = +1
Query: 7 GLVVENRLEITNCFPFPKH---DDTMDEEEYQLDMMRRLRRVNVDHFHVGWYQSADVGNF 177
GLVV++RLEITNCFPFP+H D DE +YQ++MMR LR VN+DH HVGWYQS G+F
Sbjct: 69 GLVVKDRLEITNCFPFPQHTEDDADFDEVQYQMEMMRSLRHVNIDHLHVGWYQSTYYGSF 128
Query: 178 LSQSLLESQYHYQTSIEESVVVIYDTKKSARGFLTLKAYRLTPQAIAMYKEGDYTPDALR 357
++++LL+SQ+ YQ +IEESVV+IYD K+A+G L+LKAYRLTP+ + + KE D++P+AL+
Sbjct: 129 VTRALLDSQFSYQHAIEESVVLIYDPIKTAQGSLSLKAYRLTPKLMEVCKEKDFSPEALK 188
Query: 358 NLKIGYESLFIEVPIVIRNSPLTNIMISELTEMIPEEEGSKFLDLGTASVLDGQLRSLME 537
I +E +F EVPIVI+NS L N+++ EL + + + L L +++ L L+ LM+
Sbjct: 189 KANITFEYMFEEVPIVIKNSHLINVLMWELEKKSAVADKHELLSLASSNHLGKNLQLLMD 248
Query: 538 RVDELNQEAIKFNRYQQ 588
RVDE++Q+ +K+N Y +
Sbjct: 249 RVDEMSQDIVKYNTYMR 265
>AK222620-1|BAD96340.1| 352|Homo sapiens eukaryotic translation
initiation factor 3, subunit 3 gamma, 40kDa variant
protein.
Length = 352
Score = 215 bits (524), Expect = 1e-55
Identities = 102/197 (51%), Positives = 146/197 (74%), Gaps = 3/197 (1%)
Frame = +1
Query: 7 GLVVENRLEITNCFPFPKH---DDTMDEEEYQLDMMRRLRRVNVDHFHVGWYQSADVGNF 177
GLVVE+RLEITNCFPFP+H D DE +YQ++MMR LR VN+DH HVGWYQS G+F
Sbjct: 69 GLVVEDRLEITNCFPFPQHTEDDADFDEVQYQMEMMRSLRHVNIDHLHVGWYQSTYYGSF 128
Query: 178 LSQSLLESQYHYQTSIEESVVVIYDTKKSARGFLTLKAYRLTPQAIAMYKEGDYTPDALR 357
++++LL+SQ+ YQ +IEESVV+IYD K+A+G L+LKAYRLTP+ + + KE D++P+AL+
Sbjct: 129 VTRALLDSQFSYQHAIEESVVLIYDPIKTAQGSLSLKAYRLTPKLMEVCKEKDFSPEALK 188
Query: 358 NLKIGYESLFIEVPIVIRNSPLTNIMISELTEMIPEEEGSKFLDLGTASVLDGQLRSLME 537
I E +F EVPIVI+NS L N+++ EL + + + L L +++ L L+ LM+
Sbjct: 189 KANITSEYMFEEVPIVIKNSHLINVLMWELEKKSAVADKHELLSLASSNHLGKNLQLLMD 248
Query: 538 RVDELNQEAIKFNRYQQ 588
RVDE++Q+ +K+N Y +
Sbjct: 249 RVDEMSQDIVKYNTYMR 265
>AF354444-1|AAK18634.1| 348|Homo sapiens IFP38 protein.
Length = 348
Score = 42.3 bits (95), Expect = 0.001
Identities = 31/137 (22%), Positives = 66/137 (48%), Gaps = 2/137 (1%)
Frame = +1
Query: 7 GLVVENRLEITNCF--PFPKHDDTMDEEEYQLDMMRRLRRVNVDHFHVGWYQSADVGNFL 180
G V ++ +E+TNCF + + D+ + + E+ +M ++V+ + +GWY + +
Sbjct: 112 GTVNKHSVEVTNCFSVSYNESDEVVVDMEFAKNMYELHKKVSPNELILGWYAAGH--DIT 169
Query: 181 SQSLLESQYHYQTSIEESVVVIYDTKKSARGFLTLKAYRLTPQAIAMYKEGDYTPDALRN 360
S+L +Y Y + + DT G +++KAY T + G +TP ++
Sbjct: 170 EHSVLIHEY-YSREAPNPIHLTVDTSLQ-NGHMSIKAYVSTLMGVPGRTVGVFTPLTVKY 227
Query: 361 LKIGYESLFIEVPIVIR 411
Y++ I V ++++
Sbjct: 228 AY--YDTECIRVDLIMK 242
>U94855-1|AAD03467.1| 357|Homo sapiens translation initiation
factor 3 47 kDa subunit protein.
Length = 357
Score = 38.7 bits (86), Expect = 0.015
Identities = 27/100 (27%), Positives = 50/100 (50%), Gaps = 4/100 (4%)
Frame = +1
Query: 7 GLVVENRLEITNCFPFPKHDDTMDE----EEYQLDMMRRLRRVNVDHFHVGWYQSADVGN 174
G V ++ +E+TNCF P H+++ DE E+ +M ++V+ + +GWY + +
Sbjct: 122 GTVDKHSVEVTNCFSVP-HNESEDEVAVDMEFAKNMYELHKKVSPNELILGWYATGH--D 178
Query: 175 FLSQSLLESQYHYQTSIEESVVVIYDTKKSARGFLTLKAY 294
S+L +Y Y + + DT G +++KAY
Sbjct: 179 ITEHSVLIHEY-YSREAPNPIHLTVDTSLQ-NGRMSIKAY 216
>CR456959-1|CAG33240.1| 357|Homo sapiens EIF3S5 protein.
Length = 357
Score = 38.7 bits (86), Expect = 0.015
Identities = 27/100 (27%), Positives = 50/100 (50%), Gaps = 4/100 (4%)
Frame = +1
Query: 7 GLVVENRLEITNCFPFPKHDDTMDE----EEYQLDMMRRLRRVNVDHFHVGWYQSADVGN 174
G V ++ +E+TNCF P H+++ DE E+ +M ++V+ + +GWY + +
Sbjct: 122 GTVDKHSVEVTNCFSVP-HNESEDEVAVDMEFAKNMYELHKKVSPNELILGWYATGH--D 178
Query: 175 FLSQSLLESQYHYQTSIEESVVVIYDTKKSARGFLTLKAY 294
S+L +Y Y + + DT G +++KAY
Sbjct: 179 ITEHSVLIHEY-YSREAPNPIHLTVDTSLQ-NGRMSIKAY 216
>BT006894-1|AAP35540.1| 357|Homo sapiens eukaryotic translation
initiation factor 3, subunit 5 epsilon, 47kDa protein.
Length = 357
Score = 38.7 bits (86), Expect = 0.015
Identities = 27/100 (27%), Positives = 50/100 (50%), Gaps = 4/100 (4%)
Frame = +1
Query: 7 GLVVENRLEITNCFPFPKHDDTMDE----EEYQLDMMRRLRRVNVDHFHVGWYQSADVGN 174
G V ++ +E+TNCF P H+++ DE E+ +M ++V+ + +GWY + +
Sbjct: 122 GTVDKHSVEVTNCFSVP-HNESEDEVAVDMEFAKNMYELHKKVSPNELILGWYATGH--D 178
Query: 175 FLSQSLLESQYHYQTSIEESVVVIYDTKKSARGFLTLKAY 294
S+L +Y Y + + DT G +++KAY
Sbjct: 179 ITEHSVLIHEY-YSREAPNPIHLTVDTSLQ-NGRMSIKAY 216
>BC000490-1|AAH00490.1| 357|Homo sapiens eukaryotic translation
initiation factor 3, subunit 5 epsilon, 47kDa protein.
Length = 357
Score = 38.7 bits (86), Expect = 0.015
Identities = 27/100 (27%), Positives = 50/100 (50%), Gaps = 4/100 (4%)
Frame = +1
Query: 7 GLVVENRLEITNCFPFPKHDDTMDE----EEYQLDMMRRLRRVNVDHFHVGWYQSADVGN 174
G V ++ +E+TNCF P H+++ DE E+ +M ++V+ + +GWY + +
Sbjct: 122 GTVDKHSVEVTNCFSVP-HNESEDEVAVDMEFAKNMYELHKKVSPNELILGWYATGH--D 178
Query: 175 FLSQSLLESQYHYQTSIEESVVVIYDTKKSARGFLTLKAY 294
S+L +Y Y + + DT G +++KAY
Sbjct: 179 ITEHSVLIHEY-YSREAPNPIHLTVDTSLQ-NGRMSIKAY 216
>AK095574-1|BAC04577.1| 350|Homo sapiens protein ( Homo sapiens
cDNA FLJ38255 fis, clone FCBBF3001020, highly similar to
EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 5. ).
Length = 350
Score = 38.7 bits (86), Expect = 0.015
Identities = 27/100 (27%), Positives = 50/100 (50%), Gaps = 4/100 (4%)
Frame = +1
Query: 7 GLVVENRLEITNCFPFPKHDDTMDE----EEYQLDMMRRLRRVNVDHFHVGWYQSADVGN 174
G V ++ +E+TNCF P H+++ DE E+ +M ++V+ + +GWY + +
Sbjct: 115 GTVDKHSVEVTNCFSVP-HNESEDEVAVDMEFAKNMYELHKKVSPNELILGWYATGH--D 171
Query: 175 FLSQSLLESQYHYQTSIEESVVVIYDTKKSARGFLTLKAY 294
S+L +Y Y + + DT G +++KAY
Sbjct: 172 ITEHSVLIHEY-YSREAPNPIHLTVDTSLQ-NGRMSIKAY 209
>D50063-1|BAA08780.1| 324|Homo sapiens proteasome subunit p40 /
Mov34 protein protein.
Length = 324
Score = 30.3 bits (65), Expect = 5.4
Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 6/95 (6%)
Frame = +1
Query: 28 LEITNCFPFPKHDDTMDEEEYQLD------MMRRLRRVNVDHFHVGWYQSADVGNFLSQS 189
L+++N F P +D D+ + LD M ++VN VGWY + G L ++
Sbjct: 48 LDVSNSFAVPFDEDDKDDSVWFLDHDYLENMYGMFKKVNARERIVGWYHT---GPKLHKN 104
Query: 190 LLESQYHYQTSIEESVVVIYDTKKSARGFLTLKAY 294
+ + SV+VI D K G L +AY
Sbjct: 105 DIAINELMKRYCPNSVLVIIDVKPKDLG-LPTEAY 138
>BC012606-1|AAH12606.1| 324|Homo sapiens proteasome (prosome,
macropain) 26S subunit, non-ATPase, 7 (Mov34 homolog)
protein.
Length = 324
Score = 30.3 bits (65), Expect = 5.4
Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 6/95 (6%)
Frame = +1
Query: 28 LEITNCFPFPKHDDTMDEEEYQLD------MMRRLRRVNVDHFHVGWYQSADVGNFLSQS 189
L+++N F P +D D+ + LD M ++VN VGWY + G L ++
Sbjct: 48 LDVSNSFAVPFDEDDKDDSVWFLDHDYLENMYGMFKKVNARERIVGWYHT---GPKLHKN 104
Query: 190 LLESQYHYQTSIEESVVVIYDTKKSARGFLTLKAY 294
+ + SV+VI D K G L +AY
Sbjct: 105 DIAINELMKRYCPNSVLVIIDVKPKDLG-LPTEAY 138
>BC000338-1|AAH00338.1| 326|Homo sapiens PSMD7 protein protein.
Length = 326
Score = 30.3 bits (65), Expect = 5.4
Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 6/95 (6%)
Frame = +1
Query: 28 LEITNCFPFPKHDDTMDEEEYQLD------MMRRLRRVNVDHFHVGWYQSADVGNFLSQS 189
L+++N F P +D D+ + LD M ++VN VGWY + G L ++
Sbjct: 48 LDVSNSFAVPFDEDDKDDSVWFLDHDYLENMYGMFKKVNARERIVGWYHT---GPKLHKN 104
Query: 190 LLESQYHYQTSIEESVVVIYDTKKSARGFLTLKAY 294
+ + SV+VI D K G L +AY
Sbjct: 105 DIAINELMKRYCPNSVLVIIDVKPKDLG-LPTEAY 138
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,494,210
Number of Sequences: 237096
Number of extensions: 1813458
Number of successful extensions: 3220
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 3131
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3212
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6297951520
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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