Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_I22
(457 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1758 - 39681942-39682030,39682115-39682345,39682643-396826... 78 4e-15
01_01_0682 - 5244805-5244919,5246468-5246613,5246813-5246994,524... 68 3e-12
03_02_0758 + 10954268-10954841,10955988-10957145,10957176-109572... 66 2e-11
01_05_0292 + 20518668-20519090,20519213-20519281,20520204-205204... 50 7e-07
08_01_0397 - 3509186-3510291,3510322-3512335 49 2e-06
08_01_0353 - 3107628-3107774,3108177-3108213,3108248-3109164,310... 48 5e-06
01_01_0509 - 3713109-3713244,3713689-3713733,3713959-3714015,371... 46 1e-05
11_06_0767 + 27121761-27123335,27123701-27123910,27124843-271249... 46 2e-05
02_01_0765 - 5694535-5694644,5695039-5696550,5697229-5697390,569... 38 0.005
07_03_1500 + 27001842-27002058,27002144-27002283,27002458-270025... 36 0.012
06_03_0674 + 23422004-23422552,23423295-23423369,23424360-234244... 36 0.015
03_05_0865 - 28365430-28367640 36 0.020
02_01_0381 - 2764331-2764342,2768966-2769907 34 0.047
06_03_1255 + 28780181-28781172,28782065-28782932 33 0.082
03_06_0365 - 33399422-33399925,33400470-33400583,33400762-334009... 31 0.58
07_01_0725 - 5532803-5533324,5533631-5533657,5534285-5534398,553... 29 1.8
01_07_0192 - 41888998-41890632 29 2.3
10_01_0003 + 46158-46428,46588-46706,46819-46928,48977-49415,495... 27 7.2
06_03_1265 + 28847782-28849803 27 7.2
11_06_0300 + 22095396-22096145,22096261-22096344,22097062-220973... 27 9.5
>01_06_1758 -
39681942-39682030,39682115-39682345,39682643-39682679,
39683604-39683835,39683937-39684022,39684126-39684218,
39684302-39684465,39684541-39684702,39684783-39684962,
39685079-39685515,39685614-39685669
Length = 588
Score = 77.8 bits (183), Expect = 4e-15
Identities = 35/76 (46%), Positives = 47/76 (61%)
Frame = +1
Query: 229 PNWDSLSLQPFNKDFYNPHKSVLDRSPYEVEDYRNKHEVTVSGVEVPNPIEHFEEANFPD 408
P D SL PF K+FY +V S +V YR + ++TV G +VP P+ +F+EANFPD
Sbjct: 106 PKPDFRSLIPFEKNFYVECPAVQAMSDMDVSQYRRQRDITVEGHDVPKPVRYFQEANFPD 165
Query: 409 YVCQAIKSMGYKDPTP 456
Y QAI G+ +PTP
Sbjct: 166 YCMQAIAKSGFVEPTP 181
>01_01_0682 -
5244805-5244919,5246468-5246613,5246813-5246994,
5247069-5247295,5247382-5247467,5247564-5247656,
5247964-5248118,5248407-5248490,5248589-5248768,
5249587-5249828,5249927-5249982
Length = 521
Score = 68.1 bits (159), Expect = 3e-12
Identities = 30/69 (43%), Positives = 40/69 (57%)
Frame = +1
Query: 250 LQPFNKDFYNPHKSVLDRSPYEVEDYRNKHEVTVSGVEVPNPIEHFEEANFPDYVCQAIK 429
L F K+FY SV + EVE YR + E+TV G +VP P+ F + FP+YV Q I
Sbjct: 48 LPRFEKNFYVESPSVAGMTEEEVEAYRRRREITVEGRDVPKPVREFRDVGFPEYVLQEIT 107
Query: 430 SMGYKDPTP 456
G+ +PTP
Sbjct: 108 KAGFVEPTP 116
>03_02_0758 +
10954268-10954841,10955988-10957145,10957176-10957216,
10957412-10957448,10957534-10957954,10958201-10958234
Length = 754
Score = 65.7 bits (153), Expect = 2e-11
Identities = 30/71 (42%), Positives = 39/71 (54%)
Frame = +1
Query: 241 SLSLQPFNKDFYNPHKSVLDRSPYEVEDYRNKHEVTVSGVEVPNPIEHFEEANFPDYVCQ 420
++ +PFNKDFY SV S EV DY + VSG +VP PI+ F + FP +
Sbjct: 173 TIEYEPFNKDFYEEKPSVSGMSEQEVADYMKSLAIRVSGFDVPRPIKSFADCGFPVQLMN 232
Query: 421 AIKSMGYKDPT 453
AI GY+ PT
Sbjct: 233 AIAKQGYEKPT 243
>01_05_0292 +
20518668-20519090,20519213-20519281,20520204-20520473,
20520734-20521084,20521251-20521528,20522755-20523099,
20523346-20523911,20525155-20525528
Length = 891
Score = 50.4 bits (115), Expect = 7e-07
Identities = 21/46 (45%), Positives = 28/46 (60%)
Frame = +1
Query: 319 EDYRNKHEVTVSGVEVPNPIEHFEEANFPDYVCQAIKSMGYKDPTP 456
E YR++HE+TV G VP PI FE FP + + I+ G+ PTP
Sbjct: 130 EAYRHRHEITVVGDNVPAPITSFETGGFPPEILKEIQRAGFSSPTP 175
>08_01_0397 - 3509186-3510291,3510322-3512335
Length = 1039
Score = 48.8 bits (111), Expect = 2e-06
Identities = 22/69 (31%), Positives = 37/69 (53%)
Frame = +1
Query: 244 LSLQPFNKDFYNPHKSVLDRSPYEVEDYRNKHEVTVSGVEVPNPIEHFEEANFPDYVCQA 423
+ QPF K+FY K + + EV YR + E+ V G +VP PI+ + ++ +
Sbjct: 379 IDYQPFRKNFYIEVKDITKMAAEEVAAYRKQLELKVHGKDVPKPIKTWVQSGLTSKLLDT 438
Query: 424 IKSMGYKDP 450
IK +G++ P
Sbjct: 439 IKKLGFEKP 447
>08_01_0353 -
3107628-3107774,3108177-3108213,3108248-3109164,
3109210-3110952
Length = 947
Score = 47.6 bits (108), Expect = 5e-06
Identities = 22/71 (30%), Positives = 36/71 (50%)
Frame = +1
Query: 244 LSLQPFNKDFYNPHKSVLDRSPYEVEDYRNKHEVTVSGVEVPNPIEHFEEANFPDYVCQA 423
+ QPF K+ Y K + + EV YR E+ V G +VP PI+ + ++ +
Sbjct: 240 IEYQPFRKNLYIEVKDITMMTGEEVATYRKNLELKVHGKDVPKPIKTWVQSGLTSKLLDT 299
Query: 424 IKSMGYKDPTP 456
IK +G++ P P
Sbjct: 300 IKKLGFEKPMP 310
>01_01_0509 -
3713109-3713244,3713689-3713733,3713959-3714015,
3714088-3714438,3714585-3714862,3714939-3715289,
3715378-3715647,3716035-3716103,3716194-3716304,
3716503-3716583,3716825-3716914,3717032-3717262
Length = 689
Score = 46.4 bits (105), Expect = 1e-05
Identities = 18/46 (39%), Positives = 26/46 (56%)
Frame = +1
Query: 319 EDYRNKHEVTVSGVEVPNPIEHFEEANFPDYVCQAIKSMGYKDPTP 456
E YR KHE+T+ G E P P F+ FP + + ++ G+ PTP
Sbjct: 160 EAYRAKHEITIVGNEAPAPFMTFQSTGFPPEILREVQQAGFSAPTP 205
>11_06_0767 +
27121761-27123335,27123701-27123910,27124843-27124911,
27125387-27125656,27126027-27126377,27126480-27126757,
27126887-27128330
Length = 1398
Score = 45.6 bits (103), Expect = 2e-05
Identities = 20/44 (45%), Positives = 24/44 (54%)
Frame = +1
Query: 325 YRNKHEVTVSGVEVPNPIEHFEEANFPDYVCQAIKSMGYKDPTP 456
YR HEVT G VP P FE FP + Q I + G+ +PTP
Sbjct: 586 YRQHHEVTAVGENVPPPFMTFEATGFPPEILQEIHAAGFLNPTP 629
>02_01_0765 -
5694535-5694644,5695039-5696550,5697229-5697390,
5698015-5698057
Length = 608
Score = 37.5 bits (83), Expect = 0.005
Identities = 15/48 (31%), Positives = 28/48 (58%)
Frame = +1
Query: 313 EVEDYRNKHEVTVSGVEVPNPIEHFEEANFPDYVCQAIKSMGYKDPTP 456
++ R+K ++ V G +VP+PI F + P+ + +++ GY PTP
Sbjct: 160 QIASLRSKLDICVKGEDVPDPIMCFSSSGLPEKLVLNLEAAGYVMPTP 207
>07_03_1500 +
27001842-27002058,27002144-27002283,27002458-27002549,
27002680-27002776,27002871-27002951,27003031-27003263,
27003876-27004070,27004149-27004239,27004324-27004446,
27004542-27004692,27005060-27005262
Length = 540
Score = 36.3 bits (80), Expect = 0.012
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 4/47 (8%)
Frame = +1
Query: 328 RNKHEVTVSGVEVPNPIEHFEEA----NFPDYVCQAIKSMGYKDPTP 456
R K ++ +SG VP P+E+FEE Y+ + +G+++PTP
Sbjct: 125 RKKFDIHISGQNVPAPLENFEELVSRYGCDSYLVGNLSKLGFQEPTP 171
>06_03_0674 +
23422004-23422552,23423295-23423369,23424360-23424443,
23424749-23424991,23425348-23425515,23425608-23425727,
23426372-23427016
Length = 627
Score = 35.9 bits (79), Expect = 0.015
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = +1
Query: 343 VTVSGVEVPNPIEHFEEANFPDYVCQAIKSMGYKDPTP 456
V VSG +VP P + FE A + V + + GY+ PTP
Sbjct: 72 VEVSGEDVPPPADGFEAAGLVEAVLRNVARCGYESPTP 109
>03_05_0865 - 28365430-28367640
Length = 736
Score = 35.5 bits (78), Expect = 0.020
Identities = 14/57 (24%), Positives = 31/57 (54%)
Frame = +1
Query: 286 KSVLDRSPYEVEDYRNKHEVTVSGVEVPNPIEHFEEANFPDYVCQAIKSMGYKDPTP 456
KS+ + + + +R ++ G +VP P+ + E+ + +A++ GYK+P+P
Sbjct: 284 KSLDEMTERDWRIFREDFNISYKGSKVPRPMRKWSESKLGTELLRAVEKAGYKEPSP 340
>02_01_0381 - 2764331-2764342,2768966-2769907
Length = 317
Score = 34.3 bits (75), Expect = 0.047
Identities = 13/48 (27%), Positives = 24/48 (50%)
Frame = +1
Query: 313 EVEDYRNKHEVTVSGVEVPNPIEHFEEANFPDYVCQAIKSMGYKDPTP 456
+ ++ R K + V G +VP P F + P+ + + ++ G PTP
Sbjct: 160 KADELRRKWHILVDGDDVPPPARDFRDLRLPEPMLRKLREKGIVQPTP 207
>06_03_1255 + 28780181-28781172,28782065-28782932
Length = 619
Score = 33.5 bits (73), Expect = 0.082
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +1
Query: 295 LDRSPYEVED-YRNKHEVTVSGVEVPNPIEHFEEANFPDYVCQAIKSMGYKDPTP 456
L R P D R + V G +VP P F + P+ + +A++ G + PTP
Sbjct: 144 LRRMPRSRADALRRSWHILVDGDDVPPPSRSFGDLRLPEPILRALRGKGIEKPTP 198
>03_06_0365 -
33399422-33399925,33400470-33400583,33400762-33400929,
33401305-33401547,33402148-33402231,33402323-33403098,
33404423-33404636
Length = 700
Score = 30.7 bits (66), Expect = 0.58
Identities = 22/81 (27%), Positives = 33/81 (40%), Gaps = 4/81 (4%)
Frame = +1
Query: 226 RPNWDSLSLQP---FNKDFYNPHKSVLDRSPYEVE-DYRNKHEVTVSGVEVPNPIEHFEE 393
RP WD +P N + + D + + D V SG +VP P+ F E
Sbjct: 182 RPGWDRRDREPNPFANSEAEEATEVDFDTANTGINFDAYEDIPVETSGHDVPPPVNTFAE 241
Query: 394 ANFPDYVCQAIKSMGYKDPTP 456
+ D + + I+ Y PTP
Sbjct: 242 IDLGDALNENIRRCKYVKPTP 262
>07_01_0725 -
5532803-5533324,5533631-5533657,5534285-5534398,
5534564-5534731,5535951-5536193,5537178-5537261,
5537357-5538117,5539637-5539730,5540633-5540899,
5541311-5541316,5542538-5542657
Length = 801
Score = 29.1 bits (62), Expect = 1.8
Identities = 24/84 (28%), Positives = 34/84 (40%), Gaps = 4/84 (4%)
Frame = +1
Query: 217 NMRRPNWDSLSLQPFNKDFYNPHKSVLD----RSPYEVEDYRNKHEVTVSGVEVPNPIEH 384
N R WD +P F N + +D + E Y + V SG +VP P
Sbjct: 268 NSRPGGWDRRDREP--DPFANSEAAEVDFEGENTGINFEAYEDI-PVETSGHDVPPPANT 324
Query: 385 FEEANFPDYVCQAIKSMGYKDPTP 456
F E + D + + I+ Y PTP
Sbjct: 325 FAEIDLGDALNENIRRCKYVKPTP 348
>01_07_0192 - 41888998-41890632
Length = 544
Score = 28.7 bits (61), Expect = 2.3
Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +1
Query: 352 SGVEVPNP--IEHFEEANFPDYVCQAIKSMGYKD 447
SGV NP ++HF A+FP+YV A ++ ++D
Sbjct: 84 SGVATANPAVVDHFLRASFPNYVKGARFAVPFED 117
>10_01_0003 +
46158-46428,46588-46706,46819-46928,48977-49415,
49511-49633,49805-50106,50143-50350,50729-51448
Length = 763
Score = 27.1 bits (57), Expect = 7.2
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = +1
Query: 277 NPHKSVLDRS--PYEVEDYRNKHEVTVSGVEVPNPIEHFEEAN 399
N +S+LD YE + +++E+T+S PN E +AN
Sbjct: 234 NNAESILDEGYISYEAQTPADRYEITISDNGQPNDYESLVDAN 276
>06_03_1265 + 28847782-28849803
Length = 673
Score = 27.1 bits (57), Expect = 7.2
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = +2
Query: 191 PRKISLVGKICDALIGIRCRSNHLTKIFIILINQSW 298
PR +S V K C+ L+G RS LT+ +++I++SW
Sbjct: 414 PRIVSFVAKYCNQLLGDPYRS-VLTQ--VLVIHRSW 446
>11_06_0300 +
22095396-22096145,22096261-22096344,22097062-22097304,
22098535-22098702,22098895-22099008,22099378-22099890
Length = 623
Score = 26.6 bits (56), Expect = 9.5
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = +1
Query: 343 VTVSGVEVPNPIEHFEEANFPDYVCQAIKSMGYKDPTP 456
V SG EVP P+ F E + + I+ Y PTP
Sbjct: 143 VETSGREVPPPVGTFAEIDLGQALNDNIRRCKYVRPTP 180
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,365,867
Number of Sequences: 37544
Number of extensions: 166109
Number of successful extensions: 357
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 352
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 357
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 895500300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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