Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_I19
(541 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0003 + 30921197-30921388,30921514-30921632,30921742-309218... 38 0.005
04_04_0589 + 26449184-26450500,26452220-26452310,26452428-264525... 37 0.012
04_04_1596 + 34684943-34686340,34688085-34688175,34688290-346883... 36 0.021
02_05_0076 + 25637752-25639062,25639221-25639297,25640962-256410... 33 0.11
10_08_0305 - 16644276-16644290,16644611-16645258,16646764-166468... 32 0.25
10_06_0164 + 11364436-11367280,11367357-11367715 31 0.44
12_01_0418 - 3304741-3304904,3305579-3305762,3307254-3307347,330... 31 0.78
03_01_0320 - 2510907-2512190 31 0.78
11_01_0699 - 5757410-5757458,5757760-5757831,5758084-5758152,575... 29 1.8
06_01_0803 + 6030742-6031038,6031228-6031314,6031620-6031821,603... 29 1.8
02_02_0528 + 11199799-11200470,11201850-11201951,11202858-112034... 29 1.8
07_03_0011 + 12370624-12370684,12372573-12372718,12372793-123731... 29 2.4
07_03_1278 - 25413432-25413652,25413678-25413769,25413944-25414146 29 3.1
01_06_0898 - 32832665-32832724,32832761-32832815,32832957-328331... 29 3.1
12_01_0503 - 3981603-3981730,3982858-3983023,3983057-3983139,398... 28 4.1
11_01_0559 - 4406815-4406922,4408954-4409042,4409177-4409270,440... 28 4.1
09_02_0022 + 3065644-3065953,3066048-3067162,3067261-3067437,306... 28 4.1
08_01_0253 + 2072766-2072954,2073526-2073591,2073755-2073877,207... 28 4.1
04_03_0897 - 20646750-20646918,20647927-20648038,20649650-206501... 28 4.1
07_03_0030 - 12623238-12623396,12623494-12623687,12624228-126243... 28 5.5
07_03_0971 + 23038409-23039134,23040321-23040611 27 7.2
04_04_0990 - 29955207-29955551,29955639-29955813,29955887-299560... 27 7.2
02_01_0084 - 573638-574305,574705-574900,574997-577246,578053-57... 27 7.2
01_05_0309 - 20713774-20713818,20713838-20713915,20714044-207142... 27 7.2
10_01_0252 + 2646074-2646430,2646476-2648158 27 9.6
03_05_0969 + 29283905-29284570,29284862-29284930,29286533-292866... 27 9.6
03_02_0939 + 12571052-12571173,12571219-12571309,12571413-125715... 27 9.6
03_01_0107 + 849489-850652,850745-850835,850926-851083,851180-85... 27 9.6
>03_06_0003 +
30921197-30921388,30921514-30921632,30921742-30921811,
30922078-30922161,30922258-30922344,30922431-30922501,
30922648-30922702,30923374-30923509,30925009-30925103,
30925203-30925357,30925435-30925543,30925761-30925817,
30925913-30926027,30926177-30926264,30926738-30927501,
30927600-30927688,30928315-30928422,30928550-30928657,
30928887-30928977,30929235-30929287,30929557-30929712,
30930763-30930825,30931491-30931535,30932075-30932130,
30933051-30933132,30933238-30933354,30933428-30933530,
30933912-30934062,30934180-30934417,30934564-30934764,
30934850-30934935,30935036-30935135
Length = 1347
Score = 37.9 bits (84), Expect = 0.005
Identities = 16/29 (55%), Positives = 21/29 (72%)
Frame = +2
Query: 344 QYLLTSGLDSSIKLWELASSRCLIQYTGA 430
+Y+L+ G DS IKLWE+ S R + QY GA
Sbjct: 355 RYVLSCGKDSCIKLWEVGSGRLVKQYVGA 383
>04_04_0589 +
26449184-26450500,26452220-26452310,26452428-26452585,
26452670-26452768,26453296-26453345,26453654-26453705,
26453773-26454058,26454286-26454400,26454938-26455020,
26455381-26455466
Length = 778
Score = 36.7 bits (81), Expect = 0.012
Identities = 13/31 (41%), Positives = 22/31 (70%)
Frame = +2
Query: 320 LYICICNTQYLLTSGLDSSIKLWELASSRCL 412
L +C +QYLL+S +D ++KLW ++ + CL
Sbjct: 431 LDLCWSKSQYLLSSSMDKTVKLWHMSRTSCL 461
>04_04_1596 +
34684943-34686340,34688085-34688175,34688290-34688354,
34688530-34688581,34688747-34688829,34688942-34689035,
34689468-34690051
Length = 788
Score = 35.9 bits (79), Expect = 0.021
Identities = 12/24 (50%), Positives = 20/24 (83%)
Frame = +2
Query: 341 TQYLLTSGLDSSIKLWELASSRCL 412
+QYLL+S +D ++KLW++ +S CL
Sbjct: 465 SQYLLSSSMDKTVKLWDITTSTCL 488
>02_05_0076 +
25637752-25639062,25639221-25639297,25640962-25641095,
25641178-25641242,25641431-25641482,25641912-25641994,
25642128-25642221,25642332-25642861
Length = 781
Score = 33.5 bits (73), Expect = 0.11
Identities = 11/25 (44%), Positives = 20/25 (80%)
Frame = +2
Query: 338 NTQYLLTSGLDSSIKLWELASSRCL 412
+ QYLL+S +D +++LW ++S+ CL
Sbjct: 475 SVQYLLSSSMDKTVRLWHVSSTYCL 499
>10_08_0305 -
16644276-16644290,16644611-16645258,16646764-16646865,
16646980-16647111,16647574-16648242
Length = 521
Score = 32.3 bits (70), Expect = 0.25
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +2
Query: 278 TNSHFIIAINFNFSLYICICNTQYLLTSGLDSSIKLWELASSRCLIQYTGA 430
T H ++ S N + LLT G S+KLW +A+ C ++++ +
Sbjct: 309 TKKHCLVGHKNPISFVAWSPNDRMLLTCGNGESVKLWNVATGECSLKFSSS 359
>10_06_0164 + 11364436-11367280,11367357-11367715
Length = 1067
Score = 31.5 bits (68), Expect = 0.44
Identities = 11/42 (26%), Positives = 24/42 (57%)
Frame = -2
Query: 393 NSHSFIDESNPDVRRYCVLHIHIYREKLKLMAIMKWEFVAFL 268
+S++F P++ C+ ++ + R +LK ++ W F+ FL
Sbjct: 322 SSNNFTGIIPPEIGMLCLKYLMLQRNQLKATSVKDWRFITFL 363
>12_01_0418 -
3304741-3304904,3305579-3305762,3307254-3307347,
3308530-3308882,3309140-3309274,3309354-3309392,
3309587-3309652,3309739-3309834,3310291-3310527,
3310602-3310722,3310854-3310889,3313062-3313159,
3313298-3313591,3313842-3313904,3314280-3314438,
3314557-3314655
Length = 745
Score = 30.7 bits (66), Expect = 0.78
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 344 QYLLTSGLDSSIKLWELASSRCLIQY 421
+Y L+ DS I+LW+L RC+ Y
Sbjct: 238 RYCLSGSSDSMIRLWDLGQQRCIHSY 263
>03_01_0320 - 2510907-2512190
Length = 427
Score = 30.7 bits (66), Expect = 0.78
Identities = 13/50 (26%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +2
Query: 293 IIAINFNFSLYICICNTQYLLTSG-LDSSIKLWELASSRCLIQYTGAGTT 439
+ A+ ++ + + + L SG D SI++W+L + RC+ + G +T
Sbjct: 249 VAALTGHYKAVVSLAQGKGALYSGSTDGSIRVWDLDTHRCIYSFAGHSST 298
>11_01_0699 -
5757410-5757458,5757760-5757831,5758084-5758152,
5758329-5758477,5758568-5758699,5758784-5759109,
5759330-5759399,5759684-5759738,5760322-5760377,
5760500-5760700,5761466-5761651,5761756-5761906,
5761978-5762206,5762321-5762582,5762858-5762959
Length = 702
Score = 29.5 bits (63), Expect = 1.8
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = +2
Query: 338 NTQYLLTSGLDSSIKLWELASSRCL 412
N QY++T LD + ++W+ S C+
Sbjct: 576 NQQYIITGSLDKTARIWDCKSRTCV 600
>06_01_0803 +
6030742-6031038,6031228-6031314,6031620-6031821,
6031926-6032047,6032226-6032447
Length = 309
Score = 29.5 bits (63), Expect = 1.8
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -1
Query: 520 RVQECYKVLLKERIFFTFQKINEKIV 443
RV CYK L KER+ ++ I +KI+
Sbjct: 226 RVATCYKNLKKERVLRCYEMIQDKII 251
>02_02_0528 +
11199799-11200470,11201850-11201951,11202858-11203487,
11204287-11204547
Length = 554
Score = 29.5 bits (63), Expect = 1.8
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 350 LLTSGLDSSIKLWELASSRCLIQYTGAG 433
LLT G++ I+ W++ S +CL Y +G
Sbjct: 290 LLTCGMEEVIRCWDVESGKCLHVYEKSG 317
>07_03_0011 + 12370624-12370684,12372573-12372718,12372793-12373129,
12374323-12374452,12375346-12375406,12375572-12375618,
12376873-12376950,12377195-12377345,12377495-12377558,
12377735-12377893,12378007-12378128,12378952-12378981,
12379050-12379124,12379563-12379644,12379809-12379938,
12381417-12382164,12382833-12383054,12383127-12383276,
12384851-12384904,12384985-12385058,12386130-12386204,
12386365-12386584
Length = 1071
Score = 29.1 bits (62), Expect = 2.4
Identities = 15/31 (48%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = +2
Query: 338 NTQYLLTSG-LDSSIKLWELASSRCLIQYTG 427
N Q LL S DS+IKLWE+ R L G
Sbjct: 967 NQQLLLASASFDSTIKLWEVEQGRLLYSLAG 997
Score = 27.9 bits (59), Expect = 5.5
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +2
Query: 344 QYLLTSGLDSSIKLWELASSRCLIQYTGAG 433
+YL + LD + +W + R L Y G+G
Sbjct: 1012 EYLASGSLDQCLHIWSVKEGRILKTYRGSG 1041
>07_03_1278 - 25413432-25413652,25413678-25413769,25413944-25414146
Length = 171
Score = 28.7 bits (61), Expect = 3.1
Identities = 18/54 (33%), Positives = 29/54 (53%)
Frame = +2
Query: 233 SFIQIFFSLNIFKNATNSHFIIAINFNFSLYICICNTQYLLTSGLDSSIKLWEL 394
+F+ +++N F + + FII N NFSL IC T++ + S L S E+
Sbjct: 97 NFVSSLYAVNSF--TSEAKFIIHHNSNFSLIIC---TEFDMLSNLCSEFDTMEI 145
>01_06_0898 -
32832665-32832724,32832761-32832815,32832957-32833135,
32833218-32833328,32833600-32833647,32833810-32833949,
32834402-32834539,32834660-32834804,32834936-32835002,
32835226-32835329,32835444-32835647
Length = 416
Score = 28.7 bits (61), Expect = 3.1
Identities = 7/25 (28%), Positives = 17/25 (68%)
Frame = +2
Query: 338 NTQYLLTSGLDSSIKLWELASSRCL 412
N QY+ + +D ++++WE++ C+
Sbjct: 226 NNQYIASCSMDKTMRVWEISKGTCI 250
>12_01_0503 - 3981603-3981730,3982858-3983023,3983057-3983139,
3983250-3983301,3983497-3983654,3983756-3985617,
3986029-3986093,3986176-3986340,3986836-3986893,
3987479-3987590,3987661-3987712,3988080-3988140,
3988220-3988377,3988705-3988787,3988897-3988945,
3989122-3989185,3990225-3990317,3990410-3990543,
3991364-3991585,3991815-3991937,3992103-3992267,
3993064-3993450
Length = 1479
Score = 28.3 bits (60), Expect = 4.1
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +2
Query: 341 TQYLLTSGLDSSIKLWELASSRCL 412
T LL+S +D +++LW+ + CL
Sbjct: 1253 TDQLLSSSMDKTVRLWDTTTKACL 1276
>11_01_0559 -
4406815-4406922,4408954-4409042,4409177-4409270,
4409344-4409481,4409570-4409727,4409826-4409916,
4410003-4411637
Length = 770
Score = 28.3 bits (60), Expect = 4.1
Identities = 9/24 (37%), Positives = 17/24 (70%)
Frame = +2
Query: 341 TQYLLTSGLDSSIKLWELASSRCL 412
+Q LL+S +D +++LW+ + CL
Sbjct: 544 SQLLLSSSMDKTVRLWDTEAKACL 567
>09_02_0022 +
3065644-3065953,3066048-3067162,3067261-3067437,
3067535-3067648,3068614-3068718,3068930-3069064,
3069148-3069203,3069277-3069382,3069515-3069631,
3069705-3069831,3069915-3070141,3070164-3070727
Length = 1050
Score = 28.3 bits (60), Expect = 4.1
Identities = 9/23 (39%), Positives = 17/23 (73%)
Frame = +2
Query: 338 NTQYLLTSGLDSSIKLWELASSR 406
N +YL+T+GLD + +W++ S +
Sbjct: 260 NGRYLVTAGLDKQVLIWDVKSKQ 282
>08_01_0253 +
2072766-2072954,2073526-2073591,2073755-2073877,
2073913-2074017,2074555-2074635,2074715-2074807,
2075023-2075098,2075182-2075261,2075359-2075430,
2075553-2075612,2075775-2075871,2076137-2076200,
2076303-2076362,2076539-2076608
Length = 411
Score = 28.3 bits (60), Expect = 4.1
Identities = 8/28 (28%), Positives = 19/28 (67%)
Frame = +2
Query: 350 LLTSGLDSSIKLWELASSRCLIQYTGAG 433
++++ D S++LW + + C++ + GAG
Sbjct: 183 IISASKDESVRLWNVHTGICILIFAGAG 210
>04_03_0897 -
20646750-20646918,20647927-20648038,20649650-20650108,
20650237-20650330,20650449-20650525,20650637-20650688,
20650770-20650927,20651191-20651281,20651465-20652529
Length = 758
Score = 28.3 bits (60), Expect = 4.1
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +2
Query: 341 TQYLLTSGLDSSIKLWELASSRCL 412
+ YLLTS D ++LW++ CL
Sbjct: 354 SDYLLTSSKDKMVRLWKVGCDGCL 377
>07_03_0030 -
12623238-12623396,12623494-12623687,12624228-12624332,
12625328-12625392,12626151-12626350,12626466-12626604,
12626677-12626804,12630145-12630369,12630461-12630670
Length = 474
Score = 27.9 bits (59), Expect = 5.5
Identities = 12/45 (26%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +2
Query: 263 IFKNATNSHFIIAINFNFSLYICICNTQYLLTSGL-DSSIKLWEL 394
+F+ + ++ + ++ C+ +LL SG D SIK+W+L
Sbjct: 142 LFRKVASGELLVQWHAHYRAVRCLALYDFLLISGSEDGSIKVWDL 186
>07_03_0971 + 23038409-23039134,23040321-23040611
Length = 338
Score = 27.5 bits (58), Expect = 7.2
Identities = 13/52 (25%), Positives = 26/52 (50%)
Frame = +2
Query: 257 LNIFKNATNSHFIIAINFNFSLYICICNTQYLLTSGLDSSIKLWELASSRCL 412
+ + K TN F+ + NFN + + G D ++++W++ S RC+
Sbjct: 125 IRVLKGHTN--FVFSANFNPQ------TNSTVASGGFDCTVRIWDVKSGRCV 168
>04_04_0990 -
29955207-29955551,29955639-29955813,29955887-29956017,
29956317-29956436,29956908-29956984,29957070-29957316,
29957413-29957569,29958191-29958309,29958421-29958555,
29958636-29958921,29959009-29959211,29959732-29959881,
29960084-29960266,29960931-29961278
Length = 891
Score = 27.5 bits (58), Expect = 7.2
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +2
Query: 344 QYLLTSGLDSSIKLWELASSRCLIQYTG 427
Q ++TS D ++K+W +A CL + G
Sbjct: 562 QCVITSSGDRTVKIWAVADGSCLKTFEG 589
>02_01_0084 - 573638-574305,574705-574900,574997-577246,578053-579174,
579266-579370,579975-580028,580244-580344,580454-581423,
582030-582203,582341-582643,582719-582856,582993-583247,
584230-584370,585008-585289,585395-585540,585627-585690,
585723-585799,586285-586301,587728-587867,587972-588029,
588121-588218,588727-588776,589260-589743
Length = 2630
Score = 27.5 bits (58), Expect = 7.2
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +2
Query: 131 ASAEDTQPLKVTSTKVPN 184
A+AED QPL +ST VPN
Sbjct: 2134 AAAEDLQPLMQSSTPVPN 2151
>01_05_0309 - 20713774-20713818,20713838-20713915,20714044-20714222,
20714296-20714556,20715222-20715393,20715501-20715662,
20716435-20716863,20717729-20717785,20717872-20718842,
20719098-20719182,20719269-20719637,20719756-20720001,
20720090-20720362,20720663-20720827,20721328-20721556,
20721727-20722168,20723152-20724138,20724352-20724517,
20725070-20725728,20725820-20726186
Length = 2113
Score = 27.5 bits (58), Expect = 7.2
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +2
Query: 332 ICNTQYLLTSGLDSSIKLWELASSRCLIQY 421
I NT LT D +KLW+ SS+ + +
Sbjct: 2022 IPNTSLFLTGSKDGDVKLWDAKSSQLVFHW 2051
>10_01_0252 + 2646074-2646430,2646476-2648158
Length = 679
Score = 27.1 bits (57), Expect = 9.6
Identities = 12/26 (46%), Positives = 15/26 (57%), Gaps = 2/26 (7%)
Frame = +2
Query: 368 DSSIKLWELASSRCLIQ--YTGAGTT 439
D S+ LW LA+ CL+ YT G T
Sbjct: 452 DESVLLWHLATDLCLLSEGYTNEGAT 477
>03_05_0969 +
29283905-29284570,29284862-29284930,29286533-29286631,
29287016-29287324
Length = 380
Score = 27.1 bits (57), Expect = 9.6
Identities = 11/35 (31%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 311 NFSLYICICNTQYLLTSG-LDSSIKLWELASSRCL 412
N++ + +L SG D ++++WE+ S RCL
Sbjct: 114 NYAFCLAFSPHGNMLASGSFDETVRVWEVRSGRCL 148
>03_02_0939 +
12571052-12571173,12571219-12571309,12571413-12571512,
12571726-12571807,12571897-12571953,12572632-12572713,
12572792-12572884,12573984-12574047,12574161-12574246,
12574329-12574430,12574526-12574609,12574885-12574945,
12575010-12575091,12575173-12575250,12575867-12575931,
12576108-12576185,12576278-12576450
Length = 499
Score = 27.1 bits (57), Expect = 9.6
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +2
Query: 338 NTQYLLTSGLDSSIKLWELASSRCLIQYTG 427
+ ++ T D +IK+W+LAS + TG
Sbjct: 195 SNEWFCTGSADRTIKIWDLASGTLKLTLTG 224
>03_01_0107 +
849489-850652,850745-850835,850926-851083,851180-851231,
852373-852452,852540-852633,852711-853231,854087-854202,
854242-854293
Length = 775
Score = 27.1 bits (57), Expect = 9.6
Identities = 8/21 (38%), Positives = 16/21 (76%)
Frame = +2
Query: 350 LLTSGLDSSIKLWELASSRCL 412
LL+S +D +++LW++ + CL
Sbjct: 390 LLSSSMDKTVRLWQVGCNSCL 410
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,308,068
Number of Sequences: 37544
Number of extensions: 261214
Number of successful extensions: 699
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 656
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 699
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1198356516
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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