Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0008_I17
         (602 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    23   1.7  
AY588474-1|AAT94401.1|  104|Apis mellifera defensin 2 protein.         23   3.0  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          21   7.0  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      21   7.0  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    21   9.3  

>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -3

Query: 549 PLTLLDNNNCIIRV 508
           PLT + +NNC+ R+
Sbjct: 290 PLTTIQHNNCLTRI 303


>AY588474-1|AAT94401.1|  104|Apis mellifera defensin 2 protein.
          Length = 104

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 6/19 (31%), Positives = 12/19 (63%)
 Frame = -3

Query: 57  TCKIITLDSGWVKLKKSSC 1
           TC +++  S W+ +  S+C
Sbjct: 63  TCDVLSWQSKWLSINHSAC 81


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +3

Query: 252 PSQYQIYKHIKGYY 293
           P+ Y+IYK I  YY
Sbjct: 416 PAFYRIYKRIIDYY 429


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +3

Query: 252 PSQYQIYKHIKGYY 293
           P+ Y+IYK I  YY
Sbjct: 416 PAFYRIYKRIIDYY 429


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -2

Query: 475 LPIYNIYIYTLK*NKIK 425
           LP+YN++   L  NK++
Sbjct: 380 LPLYNLHTLELSDNKLR 396


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,714
Number of Sequences: 438
Number of extensions: 3130
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17726685
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)