Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0008_I14
(456 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha Ef... 151 4e-38
SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha Ef... 151 5e-38
SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha Ef... 151 5e-38
SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related prote... 89 2e-19
SPCC584.04 |sup35|erf3|translation release factor eRF3 |Schizosa... 84 1e-17
SPBC9B6.04c |tuf1||mitochondrial translation elongation factor E... 61 9e-11
SPBC660.10 |||translation elongation factor G|Schizosaccharomyce... 48 9e-07
SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces po... 41 1e-04
SPBC1271.15c |||translation initiation factor IF-2Mt|Schizosacch... 36 0.003
SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac... 34 0.009
SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon... 34 0.009
SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schiz... 32 0.036
SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma su... 31 0.084
SPCC1620.14c |snf22|SPCC830.01c|ATP-dependent DNA helicase Snf22... 29 0.26
SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo... 29 0.26
SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr 1||... 29 0.34
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma... 29 0.45
SPAC7D4.04 |taf1||Taz1 interacting factor 1|Schizosaccharomyces ... 27 1.4
SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyce... 27 1.8
SPBC1198.07c |||mannan endo-1,6-alpha-mannosidase |Schizosacchar... 27 1.8
SPAC2F7.10 |||palmitoyltransferase |Schizosaccharomyces pombe|ch... 26 2.4
SPAC343.07 |mug28||RNA-binding protein Mug28|Schizosaccharomyces... 26 2.4
SPAC3A12.07 |rpb11||DNA-directed RNA polymerase II complex subun... 26 3.1
SPBC2F12.14c |gua1||IMP dehydrogenase Gua1 |Schizosaccharomyces ... 25 4.2
SPBC216.05 |rad3||ATR checkpoint kinase|Schizosaccharomyces pomb... 25 4.2
SPAC24C9.15c |spn5|mde9, meu28|septin Spn5|Schizosaccharomyces p... 25 4.2
SPACUNK4.10 |||hydroxyacid dehydrogenase |Schizosaccharomyces po... 25 5.5
SPCC1223.01 ||SPCC285.18|ubiquitin-protein ligase E3 |Schizosacc... 25 5.5
SPBC28F2.07 |sfr1|dds20, mug13|Swi five-dependent recombination ... 24 9.6
SPAC2G11.11c |prh1||ATP-dependent RNA helicase Prh1|Schizosaccha... 24 9.6
SPAC20H4.09 |||ATP-dependent RNA helicase, spliceosomal |Schizos... 24 9.6
SPCC1223.04c |mug76||lysine methyltransferase |Schizosaccharomyc... 24 9.6
SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting pro... 24 9.6
>SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha
Ef1a-a |Schizosaccharomyces pombe|chr 3|||Manual
Length = 460
Score = 151 bits (367), Expect = 4e-38
Identities = 69/79 (87%), Positives = 75/79 (94%)
Frame = +1
Query: 220 AWVLDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 399
AWVLDKLKAERERGITIDIALWKFET KY VT+IDAPGHRDFIKNMITGTSQADCAVLI+
Sbjct: 57 AWVLDKLKAERERGITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAVLII 116
Query: 400 ADGTGEFQSGISQNGQTRE 456
GTGEF++GIS++GQTRE
Sbjct: 117 GGGTGEFEAGISKDGQTRE 135
Score = 116 bits (278), Expect = 2e-27
Identities = 52/56 (92%), Positives = 54/56 (96%)
Frame = +3
Query: 51 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKY 218
MGKEK HIN+VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA E+GKGSFKY
Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKY 56
>SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha
Ef1a-b |Schizosaccharomyces pombe|chr 1|||Manual
Length = 460
Score = 151 bits (366), Expect = 5e-38
Identities = 68/79 (86%), Positives = 75/79 (94%)
Frame = +1
Query: 220 AWVLDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 399
AWVLDKLKAERERGITIDIALWKFET KY VT+IDAPGHRDFIKNMITGTSQADCA+LI+
Sbjct: 57 AWVLDKLKAERERGITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAILII 116
Query: 400 ADGTGEFQSGISQNGQTRE 456
GTGEF++GIS++GQTRE
Sbjct: 117 GGGTGEFEAGISKDGQTRE 135
Score = 116 bits (278), Expect = 2e-27
Identities = 52/56 (92%), Positives = 54/56 (96%)
Frame = +3
Query: 51 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKY 218
MGKEK HIN+VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA E+GKGSFKY
Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKY 56
>SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha
Ef1a-c |Schizosaccharomyces pombe|chr 2|||Manual
Length = 460
Score = 151 bits (366), Expect = 5e-38
Identities = 68/79 (86%), Positives = 75/79 (94%)
Frame = +1
Query: 220 AWVLDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 399
AWVLDKLKAERERGITIDIALWKFET KY VT+IDAPGHRDFIKNMITGTSQADCA+LI+
Sbjct: 57 AWVLDKLKAERERGITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAILII 116
Query: 400 ADGTGEFQSGISQNGQTRE 456
GTGEF++GIS++GQTRE
Sbjct: 117 GGGTGEFEAGISKDGQTRE 135
Score = 116 bits (278), Expect = 2e-27
Identities = 52/56 (92%), Positives = 54/56 (96%)
Frame = +3
Query: 51 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKY 218
MGKEK HIN+VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA E+GKGSFKY
Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKY 56
>SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 592
Score = 89.4 bits (212), Expect = 2e-19
Identities = 42/79 (53%), Positives = 51/79 (64%)
Frame = +1
Query: 220 AWVLDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 399
AW+LD + ER RG+T+D+A FE+ K I DAPGHRDFI MI G S AD AVL+V
Sbjct: 227 AWLLDTTEEERARGVTMDVASTTFESDKKIYEIGDAPGHRDFISGMIAGASSADFAVLVV 286
Query: 400 ADGTGEFQSGISQNGQTRE 456
F+ G +NGQTRE
Sbjct: 287 DSSQNNFERGFLENGQTRE 305
Score = 58.4 bits (135), Expect = 5e-10
Identities = 24/49 (48%), Positives = 35/49 (71%)
Frame = +3
Query: 72 INIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKY 218
+++VV GHVDSGKST G ++++ G I+ R+++K EA GKGSF Y
Sbjct: 178 VHLVVTGHVDSGKSTMLGRIMFELGEINSRSMQKLHNEAANSGKGSFSY 226
>SPCC584.04 |sup35|erf3|translation release factor eRF3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 662
Score = 83.8 bits (198), Expect = 1e-17
Identities = 35/79 (44%), Positives = 52/79 (65%)
Frame = +1
Query: 220 AWVLDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 399
+W LD ERE+G T+++ FET +++DAPGH+ ++ NMI G SQAD VL++
Sbjct: 288 SWALDSTSEEREKGKTVEVGRAYFETEHRRFSLLDAPGHKGYVTNMINGASQADIGVLVI 347
Query: 400 ADGTGEFQSGISQNGQTRE 456
+ GEF++G + GQTRE
Sbjct: 348 SARRGEFEAGFERGGQTRE 366
Score = 67.3 bits (157), Expect = 1e-12
Identities = 29/50 (58%), Positives = 40/50 (80%)
Frame = +3
Query: 63 KVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSF 212
K H+NIV IGHVD+GKST G++++ G +DKRT+EK E+EA+E GK S+
Sbjct: 236 KEHVNIVFIGHVDAGKSTLGGNILFLTGMVDKRTMEKIEREAKEAGKESW 285
>SPBC9B6.04c |tuf1||mitochondrial translation elongation factor
EF-Tu Tuf1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 439
Score = 60.9 bits (141), Expect = 9e-11
Identities = 27/63 (42%), Positives = 40/63 (63%)
Frame = +1
Query: 229 LDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVADG 408
+DK E+ RGITI A ++ET + +D PGH D+IKNMITG + D A+++V+
Sbjct: 91 IDKAPEEKARGITISSAHVEYETANRHYAHVDCPGHADYIKNMITGAATMDGAIIVVSAT 150
Query: 409 TGE 417
G+
Sbjct: 151 DGQ 153
Score = 34.7 bits (76), Expect = 0.007
Identities = 16/29 (55%), Positives = 20/29 (68%)
Frame = +3
Query: 57 KEKVHINIVVIGHVDSGKSTTTGHLIYKC 143
++K H+NI IGHVD GK+T T I KC
Sbjct: 49 RKKPHVNIGTIGHVDHGKTTLTA-AITKC 76
>SPBC660.10 |||translation elongation factor G|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 813
Score = 47.6 bits (108), Expect = 9e-07
Identities = 25/63 (39%), Positives = 33/63 (52%)
Frame = +1
Query: 226 VLDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAD 405
V+D L AER+RGITI+ A F + +ID PGH DF + + D AV I+
Sbjct: 67 VMDYLPAERQRGITINSAAISFTWRNQRINLIDTPGHADFTFEVERSVAVLDGAVAIIDG 126
Query: 406 GTG 414
G
Sbjct: 127 SAG 129
Score = 28.7 bits (61), Expect = 0.45
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +3
Query: 75 NIVVIGHVDSGKSTTTGHLIYKCG 146
N+ +I H+D+GK+T T ++Y G
Sbjct: 30 NVGIIAHIDAGKTTLTEKMLYYGG 53
>SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 646
Score = 40.7 bits (91), Expect = 1e-04
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Frame = +1
Query: 229 LDKLKAERERGITIDIA----LWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 396
LDKL+ ER RGIT+ ++ + Y + +ID PGH DF ++ + + +L+
Sbjct: 95 LDKLEVERRRGITVKAQTCSMIYYYHGQSYLLNLIDTPGHVDFRAEVMHSLAACEGCILL 154
Query: 397 VADGTG 414
V G
Sbjct: 155 VDASQG 160
Score = 24.6 bits (51), Expect = 7.3
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +3
Query: 75 NIVVIGHVDSGKSTTTGHLIYKCGGIDK 158
N VI H+D GKST + ++ G I++
Sbjct: 60 NWAVIAHIDHGKSTLSDCILKLTGVINE 87
>SPBC1271.15c |||translation initiation factor
IF-2Mt|Schizosaccharomyces pombe|chr 2|||Manual
Length = 686
Score = 35.9 bits (79), Expect = 0.003
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = +1
Query: 259 GITIDIALWK--FETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVADGTG 414
GIT I + F+ G ++T +D PGH F G + AD VL+VA G
Sbjct: 203 GITQKIGAFTVPFDKGSKFITFLDTPGHMAFEAMRKRGANIADIVVLVVAGDDG 256
>SPCP31B10.07 |eft202||translation elongation factor 2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 842
Score = 34.3 bits (75), Expect = 0.009
Identities = 17/32 (53%), Positives = 19/32 (59%)
Frame = +3
Query: 51 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCG 146
MGK N+ VI HVD GKST T L+ K G
Sbjct: 13 MGKPSNVRNMSVIAHVDHGKSTLTDSLVQKAG 44
Score = 27.9 bits (59), Expect = 0.78
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +1
Query: 304 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 399
+ V +ID+PGH DF + D A+++V
Sbjct: 98 FLVNLIDSPGHVDFSSEVTAALRVTDGALVVV 129
>SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation
elongation factor 2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 34.3 bits (75), Expect = 0.009
Identities = 17/32 (53%), Positives = 19/32 (59%)
Frame = +3
Query: 51 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCG 146
MGK N+ VI HVD GKST T L+ K G
Sbjct: 13 MGKPSNVRNMSVIAHVDHGKSTLTDSLVQKAG 44
Score = 27.9 bits (59), Expect = 0.78
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +1
Query: 304 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 399
+ V +ID+PGH DF + D A+++V
Sbjct: 98 FLVNLIDSPGHVDFSSEVTAALRVTDGALVVV 129
>SPBC1306.01c ||SPBC409.22c|translation elongation factor
G|Schizosaccharomyces pombe|chr 2|||Manual
Length = 770
Score = 32.3 bits (70), Expect = 0.036
Identities = 32/104 (30%), Positives = 44/104 (42%), Gaps = 19/104 (18%)
Frame = +1
Query: 199 VRVPSNTAWVLDKLKAERERGITIDIAL----WK---------------FETGKYYVTII 321
VR N +D ++ ERE+GITI A W+ FE Y + II
Sbjct: 92 VRGKDNVGAKMDFMELEREKGITIQSAATHCTWERTVDQIEANEKQKTDFEKS-YNINII 150
Query: 322 DAPGHRDFIKNMITGTSQADCAVLIVADGTGEFQSGISQNGQTR 453
D PGH DF + D AVL++ +G I+ + Q R
Sbjct: 151 DTPGHIDFTIEVERALRVLDGAVLVLCAVSGVQSQTITVDRQMR 194
Score = 29.1 bits (62), Expect = 0.34
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +3
Query: 75 NIVVIGHVDSGKSTTTGHLIYKCGGI 152
NI + H+DSGK+T T ++Y G I
Sbjct: 61 NIGISAHIDSGKTTFTERVLYYTGRI 86
>SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 446
Score = 31.1 bits (67), Expect = 0.084
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +1
Query: 307 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 402
+V+ +D PGH + M+ G + D A+L++A
Sbjct: 109 HVSFVDCPGHDILMATMLNGAAVMDAALLLIA 140
Score = 25.0 bits (52), Expect = 5.5
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +3
Query: 45 PKMGKEKVHINIVVIGHVDSGKST 116
P + + INI IGHV GKST
Sbjct: 15 PAIISRQATINIGTIGHVAHGKST 38
>SPCC1620.14c |snf22|SPCC830.01c|ATP-dependent DNA helicase
Snf22|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1680
Score = 29.5 bits (63), Expect = 0.26
Identities = 12/34 (35%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = -3
Query: 235 CPIPKRYLKEPLPIS-WASFSNFSMVRLSIPPHL 137
C P+ Y+K P+P S ++S N S++ +PP +
Sbjct: 566 CVDPRTYVKTPIPFSKFSSSENLSLIPSLLPPSI 599
>SPAC56F8.03 |||translation initiation factor IF2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1079
Score = 29.5 bits (63), Expect = 0.26
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 316 IIDAPGHRDFIKNMITGTSQADCAVLIV 399
IID PGH F GTS + A+L++
Sbjct: 553 IIDTPGHESFTNLRSRGTSLCNIAILVI 580
>SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 380
Score = 29.1 bits (62), Expect = 0.34
Identities = 15/44 (34%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Frame = +1
Query: 232 DKLKAER-ERGITIDIALWKFETGKYYV--TIIDAPGHRDFIKN 354
+K++A+ E+ + I+I + E +++ T+ID PG DFI N
Sbjct: 60 EKVRAKHAEKTVEIEITKAELEEKNFHLRLTVIDTPGFGDFINN 103
>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1000
Score = 28.7 bits (61), Expect = 0.45
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +1
Query: 304 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 399
Y + +ID+PGH DF + + + D A ++V
Sbjct: 94 YLINLIDSPGHVDFSSEVSSASRLCDGAFVLV 125
>SPAC7D4.04 |taf1||Taz1 interacting factor 1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 926
Score = 27.1 bits (57), Expect = 1.4
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +1
Query: 154 TNVPSKSSRRKPRKWVRVPSNTAWVLDKLKAER 252
T++ +++ KW+R+PS T W L + ER
Sbjct: 893 TSIEDRTADDSTDKWLRLPSGTIWHLVEAIDER 925
>SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 983
Score = 26.6 bits (56), Expect = 1.8
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +1
Query: 319 IDAPGHRDFIKNMITGTSQADCAVLIV 399
ID PGH DF+ + + +D VL+V
Sbjct: 214 IDTPGHVDFVDEVAAPMAISDGVVLVV 240
>SPBC1198.07c |||mannan endo-1,6-alpha-mannosidase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 507
Score = 26.6 bits (56), Expect = 1.8
Identities = 13/52 (25%), Positives = 21/52 (40%)
Frame = -2
Query: 260 PRSRSAFSLSNTQAVFEGTLTHFLGFLLELFDGTFVDTTAFVDQVTSCCGLA 105
P S ++ Q F+G L FLG+ ++L T ++ LA
Sbjct: 352 PSCEPTESCNSDQTAFKGMLARFLGYTMQLAPYTVETILPYIQSSAEAAALA 403
>SPAC2F7.10 |||palmitoyltransferase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 642
Score = 26.2 bits (55), Expect = 2.4
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +1
Query: 142 AVVSTNVPSKSSRRKPRKWVRVPS 213
A++S + K + +P KWV VPS
Sbjct: 224 ALISNGLKVKETSEEPEKWVVVPS 247
>SPAC343.07 |mug28||RNA-binding protein Mug28|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 609
Score = 26.2 bits (55), Expect = 2.4
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = +2
Query: 293 KPANTMSPSSTLLDTEISSRT*SLERLKLTAPCLLSPMVLVNSNP 427
K NT S S+T ++ + T L PC + P +L+ NP
Sbjct: 216 KDNNTPSISNTFIEPYKENNTEHLHLKSAFEPCQMMPGMLLEQNP 260
>SPAC3A12.07 |rpb11||DNA-directed RNA polymerase II complex subunit
Rpb11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 123
Score = 25.8 bits (54), Expect = 3.1
Identities = 10/36 (27%), Positives = 20/36 (55%)
Frame = -1
Query: 390 HGAVSLRRSSDHVLDEISVSRSVDDGDIVFAGFELP 283
+ AV DH L + ++ + D ++FAG+++P
Sbjct: 28 NAAVVTLEKEDHTLANMLANQLLSDERVLFAGYKVP 63
>SPBC2F12.14c |gua1||IMP dehydrogenase Gua1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 524
Score = 25.4 bits (53), Expect = 4.2
Identities = 12/42 (28%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +1
Query: 241 KAERERGITID-IALWKFETGKYYVTIIDAPGHRDFIKNMIT 363
K E++ G++ID + F+ G + + PG+ DF+ N ++
Sbjct: 16 KYEKKDGLSIDDLIRHNFQGGLTFNDFLILPGYIDFVPNNVS 57
>SPBC216.05 |rad3||ATR checkpoint kinase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 2386
Score = 25.4 bits (53), Expect = 4.2
Identities = 11/41 (26%), Positives = 22/41 (53%)
Frame = -2
Query: 296 VSNFQRAISMVIPRSRSAFSLSNTQAVFEGTLTHFLGFLLE 174
+ N R ++M++ + + LSN + +++ H LG L E
Sbjct: 836 IENALRKVAMIVSQVVNDEDLSNKELLYDFFNNHILGILAE 876
>SPAC24C9.15c |spn5|mde9, meu28|septin Spn5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 464
Score = 25.4 bits (53), Expect = 4.2
Identities = 17/62 (27%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Frame = +3
Query: 66 VHINIVVIGHVDSGKSTTTGHLIYK--CGGIDKRTIEKFEKEAQEMGKGSFKYRLGIGQT 239
+ IN++V+G GK+T + K+T++ E +A + G K+ L I T
Sbjct: 117 IDINLIVVGESSLGKTTFVNSFLQSNDTNFRPKKTMDFVEHKA-TLSDGDQKFNLTIVDT 175
Query: 240 KG 245
G
Sbjct: 176 PG 177
>SPACUNK4.10 |||hydroxyacid dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 334
Score = 25.0 bits (52), Expect = 5.5
Identities = 11/38 (28%), Positives = 22/38 (57%)
Frame = -1
Query: 393 KHGAVSLRRSSDHVLDEISVSRSVDDGDIVFAGFELPE 280
K G V + + V+DE ++ ++D+G + AG ++ E
Sbjct: 236 KRGIVIVNTARGAVMDEAALVEALDEGIVYSAGLDVFE 273
>SPCC1223.01 ||SPCC285.18|ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 732
Score = 25.0 bits (52), Expect = 5.5
Identities = 8/20 (40%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
Frame = +3
Query: 264 HHRY-CSLEVRNRQILCHHH 320
HH++ C L V+N+++ H H
Sbjct: 196 HHKFFCDLCVKNKKVFTHEH 215
>SPBC28F2.07 |sfr1|dds20, mug13|Swi five-dependent recombination
repair protein Sfr1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 299
Score = 24.2 bits (50), Expect = 9.6
Identities = 16/48 (33%), Positives = 20/48 (41%)
Frame = +1
Query: 115 QQLVT*STNAVVSTNVPSKSSRRKPRKWVRVPSNTAWVLDKLKAERER 258
+QL+T T V K + +KW A VL K AER R
Sbjct: 198 EQLITAETARKVEAKNEDKDLQTLIQKWKNAAQQAAEVLFKPMAERIR 245
>SPAC2G11.11c |prh1||ATP-dependent RNA helicase
Prh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 719
Score = 24.2 bits (50), Expect = 9.6
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +3
Query: 78 IVVIGHVDSGKSTTTGHLIYKC 143
IVV+G SGKST + +C
Sbjct: 115 IVVVGETGSGKSTQIPQFLNEC 136
>SPAC20H4.09 |||ATP-dependent RNA helicase, spliceosomal
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 647
Score = 24.2 bits (50), Expect = 9.6
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +3
Query: 81 VVIGHVDSGKSTTTGHLIYKCG 146
+V+GH GK+T +Y+ G
Sbjct: 45 IVLGHTGCGKTTQIPQFLYEAG 66
>SPCC1223.04c |mug76||lysine methyltransferase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 381
Score = 24.2 bits (50), Expect = 9.6
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = +3
Query: 330 WTQRFHQEHDHWN 368
W Q F Q+H +WN
Sbjct: 258 WQQSFLQDHGYWN 270
>SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting protein
3 homolog Bud6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1385
Score = 24.2 bits (50), Expect = 9.6
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -1
Query: 420 EFTSTIGDNKHGAVSLRRSSDHVLDE 343
+F S+ + K+G + SSD VLDE
Sbjct: 1234 DFVSSKRNGKNGGSFIEESSDTVLDE 1259
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,946,949
Number of Sequences: 5004
Number of extensions: 39881
Number of successful extensions: 178
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 154
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 177
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 170285640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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