Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0008_I12
         (463 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB083010-1|BAC54131.1|  132|Apis mellifera fatty acid binding pr...    23   2.1  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    21   6.5  
X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alp...    21   8.5  

>AB083010-1|BAC54131.1|  132|Apis mellifera fatty acid binding
           protein protein.
          Length = 132

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 12/20 (60%), Positives = 13/20 (65%), Gaps = 1/20 (5%)
 Frame = +2

Query: 326 VDGKNFL-VCTLQKNKSIQV 382
           VDG+    VCTL  NK IQV
Sbjct: 76  VDGRKVKSVCTLDGNKLIQV 95


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 6/27 (22%), Positives = 18/27 (66%)
 Frame = -2

Query: 195 LTTVFSCTDD*E*YSKPNISMIETFQR 115
           ++ + +C+D  E + +  + ++E+F+R
Sbjct: 278 ISNLINCSDILEEFERNRLQLLESFKR 304


>X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alpha
           protein.
          Length = 461

 Score = 20.6 bits (41), Expect = 8.5
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = -3

Query: 326 LPPSLDKDHCLQLMCPSLLGICGMVFPPLG 237
           LPPS   D  L+L    +  I G+   P+G
Sbjct: 236 LPPSRPTDKALRLPLQDVYKIGGIGTVPVG 265


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,481
Number of Sequences: 438
Number of extensions: 3234
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12312900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)